• Home
• Research
• Resources
• Publications
• About
• People
• Events
• Jobs
• News
• Contact

Cow genome map

           
Conread name:
           
rche35_a23.y1
        

               
Conread position:
               
100-359
               

               
Cow position:
               
chr13:33875737-33875478 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
10, 99
               

               
Conread position:
               
109-417
               

               
Cow position:
               
chr13:584822-585130 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
18, 95
               

               
Conread position:
               
113-284
               

               
Cow position:
               
chr13:185577-185407 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
39, 87
               

               
Conread position:
               
113-389
               

               
Cow position:
               
chr13:10727407-10727128 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
124, 7
               

               
Conread position:
               
113-406
               

               
Cow position:
               
chr13:49392900-49393192 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
76, 20
               

               
Conread position:
               
114-355
               

               
Cow position:
               
chr13:61047257-61047020 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
35, 0
               

               
Conread position:
               
114-377
               

               
Cow position:
               
chr13:7149468-7149715 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
94, 40
               

               
Conread position:
               
114-383
               

               
Cow position:
               
chr13:19223690-19223435 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
30, 0
               

               
Conread position:
               
116-377
               

               
Cow position:
               
chr13:46516103-46515843 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
16, 29
               

               
Conread position:
               
116-382
               

               
Cow position:
               
chr13:52055551-52055814 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
246, 28
               

               
Conread position:
               
116-387
               

               
Cow position:
               
chr13:9265787-9266073 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
11, 18
               

               
Conread position:
               
119-359
               

               
Cow position:
               
chr13:30651230-30650991 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
5, 79
               

               
Conread position:
               
121-402
               

               
Cow position:
               
chr13:21280449-21280744 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
75, 32
               

               
Conread position:
               
122-307
               

               
Cow position:
               
chr13:42640419-42640240 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
10, 32
               

               
Conread position:
               
122-361
               

               
Cow position:
               
chr13:14034958-14035195 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
25, 32
               

               
Conread position:
               
123-408
               

               
Cow position:
               
chr13:23141910-23141621 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
24, 74
               

               
Conread position:
               
125-261
               

               
Cow position:
               
chr13:18243893-18243762 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
126-284
               

               
Cow position:
               
chr13:9593539-9593383 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
16, 69
               

               
Conread position:
               
126-293
               

               
Cow position:
               
chr13:20649953-20650114 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
17, 28
               

               
Conread position:
               
126-293
               

               
Cow position:
               
chr13:51901623-51901452 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
126-294
               

               
Cow position:
               
chr13:43762201-43762036 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
65, 0
               

               
Conread position:
               
126-294
               

               
Cow position:
               
chr13:43829275-43829110 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
67, 26
               

               
Conread position:
               
126-299
               

               
Cow position:
               
chr13:23856243-23856073 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
59, 0
               

               
Conread position:
               
126-311
               

               
Cow position:
               
chr13:9117539-9117713 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
126-347
               

               
Cow position:
               
chr13:47581193-47581418 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
21, 28
               

               
Conread position:
               
126-359
               

               
Cow position:
               
chr13:33352318-33352559 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
117, 65
               

               
Conread position:
               
126-360
               

               
Cow position:
               
chr13:37521711-37521944 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
203, 70
               

               
Conread position:
               
126-373
               

               
Cow position:
               
chr13:17350384-17350131 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
25, 64
               

               
Conread position:
               
126-381
               

               
Cow position:
               
chr13:11231277-11231517 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
207, 27
               

               
Conread position:
               
126-387
               

               
Cow position:
               
chr13:19427671-19427410 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
63, 51
               

               
Conread position:
               
126-390
               

               
Cow position:
               
chr13:49022835-49023094 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
235, 73
               

               
Conread position:
               
126-395
               

               
Cow position:
               
chr13:17158844-17159117 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
237, 27
               

               
Conread position:
               
126-404
               

               
Cow position:
               
chr13:46111997-46111730 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
237, 27
               

               
Conread position:
               
127-263
               

               
Cow position:
               
chr13:1042937-1043071 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
72, 0
               

               
Conread position:
               
127-361
               

               
Cow position:
               
chr13:8362719-8362943 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
36, 0
               

               
Conread position:
               
127-383
               

               
Cow position:
               
chr13:10040506-10040773 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
11, 142
               

               
Conread position:
               
127-387
               

               
Cow position:
               
chr13:57475386-57475643 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
178, 72
               

               
Conread position:
               
127-400
               

               
Cow position:
               
chr13:19393323-19393063 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
64, 0
               

               
Conread position:
               
128-357
               

               
Cow position:
               
chr13:60974104-60973871 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
168, 24
               

               
Conread position:
               
129-297
               

               
Cow position:
               
chr13:3989227-3989068 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
62, 0
               

               
Conread position:
               
129-312
               

               
Cow position:
               
chr13:36771392-36771572 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
23, 62
               

               
Conread position:
               
129-386
               

               
Cow position:
               
chr13:54388991-54389243 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
225, 61
               

               
Conread position:
               
130-283
               

               
Cow position:
               
chr13:8524588-8524745 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
21, 67
               

               
Conread position:
               
130-289
               

               
Cow position:
               
chr13:51115993-51116152 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
17, 71
               

               
Conread position:
               
130-312
               

               
Cow position:
               
chr13:13765813-13765640 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
130-361
               

               
Cow position:
               
chr13:20217367-20217594 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
24, 62
               

               
Conread position:
               
130-379
               

               
Cow position:
               
chr13:25695740-25695985 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
231, 23
               

               
Conread position:
               
130-385
               

               
Cow position:
               
chr13:9846427-9846688 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
17, 32
               

               
Conread position:
               
130-385
               

               
Cow position:
               
chr13:38035864-38035620 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
130, 59
               

               
Conread position:
               
130-385
               

               
Cow position:
               
chr13:60509090-60509348 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
19, 67
               

               
Conread position:
               
130-388
               

               
Cow position:
               
chr13:24715271-24715027 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
69, 0
               

               
Conread position:
               
130-389
               

               
Cow position:
               
chr13:28500031-28500292 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
62, 14
               

               
Conread position:
               
130-399
               

               
Cow position:
               
chr13:32283156-32282888 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
8.00001e-41
               

               
Alignm gaps (pig, cow):
               
232, 55
               

               
Conread position:
               
130-401
               

               
Cow position:
               
chr13:16020880-16020617 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
115, 68
               

               
Conread position:
               
130-403
               

               
Cow position:
               
chr13:43480085-43479821 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
135, 23
               

               
Conread position:
               
130-422
               

               
Cow position:
               
chr13:51940764-51940473 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
12, 62
               

               
Conread position:
               
131-361
               

               
Cow position:
               
chr13:20174776-20174541 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
66, 22
               

               
Conread position:
               
131-387
               

               
Cow position:
               
chr13:14576238-14575995 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
9.00054e-42
               

               
Alignm gaps (pig, cow):
               
123, 33
               

               
Conread position:
               
132-358
               

               
Cow position:
               
chr13:50601676-50601899 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
132-361
               

               
Cow position:
               
chr13:7059488-7059262 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
132-382
               

               
Cow position:
               
chr13:17089493-17089730 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
241, 58
               

               
Conread position:
               
132-388
               

               
Cow position:
               
chr13:6889773-6889517 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
19, 66
               

               
Conread position:
               
133-288
               

               
Cow position:
               
chr13:25450461-25450612 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
133-308
               

               
Cow position:
               
chr13:37981720-37981892 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
21, 28
               

               
Conread position:
               
133-308
               

               
Cow position:
               
chr13:55727927-55727755 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
133-355
               

               
Cow position:
               
chr13:20606089-20606311 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
18, 65
               

               
Conread position:
               
133-360
               

               
Cow position:
               
chr13:43183276-43183049 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
15, 64
               

               
Conread position:
               
133-361
               

               
Cow position:
               
chr13:24369608-24369389 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
10, 58
               

               
Conread position:
               
133-361
               

               
Cow position:
               
chr13:25978166-25978390 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
18, 67
               

               
Conread position:
               
133-361
               

               
Cow position:
               
chr13:45023185-45023419 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
9, 58
               

               
Conread position:
               
133-362
               

               
Cow position:
               
chr13:15288899-15289116 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
69, 0
               

               
Conread position:
               
133-362
               

               
Cow position:
               
chr13:49476112-49475874 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
133-370
               

               
Cow position:
               
chr13:9906759-9906524 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
93, 15
               

               
Conread position:
               
133-371
               

               
Cow position:
               
chr13:971872-972107 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
230, 63
               

               
Conread position:
               
133-378
               

               
Cow position:
               
chr13:41806801-41806559 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
9, 58
               

               
Conread position:
               
133-378
               

               
Cow position:
               
chr13:44003726-44003487 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
18, 46
               

               
Conread position:
               
133-378
               

               
Cow position:
               
chr13:55674182-55674423 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
11, 21
               

               
Conread position:
               
133-379
               

               
Cow position:
               
chr13:17971006-17971257 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
162, 20
               

               
Conread position:
               
133-379
               

               
Cow position:
               
chr13:18197583-18197821 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
46, 0
               

               
Conread position:
               
133-381
               

               
Cow position:
               
chr13:25817554-25817309 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
11, 59
               

               
Conread position:
               
133-382
               

               
Cow position:
               
chr13:28552612-28552367 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
234, 16
               

               
Conread position:
               
133-383
               

               
Cow position:
               
chr13:18058223-18058465 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
9, 70
               

               
Conread position:
               
133-383
               

               
Cow position:
               
chr13:52477620-52477863 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
13, 59
               

               
Conread position:
               
133-383
               

               
Cow position:
               
chr13:55081168-55080923 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
199, 63
               

               
Conread position:
               
133-384
               

               
Cow position:
               
chr13:11103167-11103429 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
15, 31
               

               
Conread position:
               
133-386
               

               
Cow position:
               
chr13:34263344-34263595 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
112, 55
               

               
Conread position:
               
133-387
               

               
Cow position:
               
chr13:57002753-57002501 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
18, 67
               

               
Conread position:
               
133-400
               

               
Cow position:
               
chr13:19279120-19278861 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
63, 0
               

               
Conread position:
               
133-403
               

               
Cow position:
               
chr13:59170678-59170399 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
124, 20
               

               
Conread position:
               
133-417
               

               
Cow position:
               
chr13:6861209-6860918 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
13, 65
               

               
Conread position:
               
134-284
               

               
Cow position:
               
chr13:51856861-51857008 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
134-294
               

               
Cow position:
               
chr13:38278124-38278280 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
54, 0
               

               
Conread position:
               
134-297
               

               
Cow position:
               
chr13:17837974-17837815 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
134-307
               

               
Cow position:
               
chr13:15281915-15282080 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
57, 0
               

               
Conread position:
               
134-333
               

               
Cow position:
               
chr13:16160441-16160252 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
134-359
               

               
Cow position:
               
chr13:18681314-18681089 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
17, 64
               

               
Conread position:
               
134-359
               

               
Cow position:
               
chr13:48597931-48597715 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
120, 55
               

               
Conread position:
               
134-361
               

               
Cow position:
               
chr13:41157429-41157201 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
160, 19
               

               
Conread position:
               
134-362
               

               
Cow position:
               
chr13:42229336-42229103 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
18, 61
               

               
Conread position:
               
134-374
               

               
Cow position:
               
chr13:5758315-5758545 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
16, 58
               

               
Conread position:
               
134-378
               

               
Cow position:
               
chr13:6974185-6973945 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
227, 19
               

               
Conread position:
               
134-378
               

               
Cow position:
               
chr13:17021705-17021938 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
222, 19
               

               
Conread position:
               
134-382
               

               
Cow position:
               
chr13:12670426-12670668 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
53, 0
               

               
Conread position:
               
134-382
               

               
Cow position:
               
chr13:50646611-50646846 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
238, 19
               

               
Conread position:
               
134-383
               

               
Cow position:
               
chr13:6183396-6183653 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
170, 19
               

               
Conread position:
               
134-387
               

               
Cow position:
               
chr13:20271202-20271458 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
123, 19
               

               
Conread position:
               
134-387
               

               
Cow position:
               
chr13:20473657-20473897 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
239, 55
               

               
Conread position:
               
134-387
               

               
Cow position:
               
chr13:52894172-52893924 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
238, 21
               

               
Conread position:
               
134-391
               

               
Cow position:
               
chr13:16014838-16014577 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
86, 62
               

               
Conread position:
               
134-399
               

               
Cow position:
               
chr13:5671563-5671821 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
239, 27
               

               
Conread position:
               
134-402
               

               
Cow position:
               
chr13:20879799-20880066 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
17, 35
               

               
Conread position:
               
134-405
               

               
Cow position:
               
chr13:38283954-38284217 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
110, 19
               

               
Conread position:
               
134-407
               

               
Cow position:
               
chr13:15195185-15195445 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
233, 19
               

               
Conread position:
               
134-427
               

               
Cow position:
               
chr13:21135877-21136177 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
68, 19
               

               
Conread position:
               
135-296
               

               
Cow position:
               
chr13:14771475-14771317 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
141, 18
               

               
Conread position:
               
135-361
               

               
Cow position:
               
chr13:33054351-33054569 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
135-383
               

               
Cow position:
               
chr13:17114356-17114598 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
158, 18
               

               
Conread position:
               
135-386
               

               
Cow position:
               
chr13:37775182-37775425 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
13, 62
               

               
Conread position:
               
135-386
               

               
Cow position:
               
chr13:57985915-57986154 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
232, 33
               

               
Conread position:
               
135-389
               

               
Cow position:
               
chr13:13320820-13320575 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
136-286
               

               
Cow position:
               
chr13:19117764-19117619 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
8, 20
               

               
Conread position:
               
136-297
               

               
Cow position:
               
chr13:20231168-20231326 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
16, 62
               

               
Conread position:
               
136-317
               

               
Cow position:
               
chr13:48554391-48554210 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
15, 54
               

               
Conread position:
               
136-361
               

               
Cow position:
               
chr13:15993408-15993187 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
136-374
               

               
Cow position:
               
chr13:35557088-35557319 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
60, 0
               

               
Conread position:
               
136-378
               

               
Cow position:
               
chr13:6663730-6663969 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
54, 0
               

               
Conread position:
               
136-384
               

               
Cow position:
               
chr13:18491620-18491384 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
15, 64
               

               
Conread position:
               
136-390
               

               
Cow position:
               
chr13:15257346-15257591 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
66, 78
               

               
Conread position:
               
136-398
               

               
Cow position:
               
chr13:19582060-19582313 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
18, 53
               

               
Conread position:
               
136-407
               

               
Cow position:
               
chr13:17822933-17823191 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
137, 17
               

               
Conread position:
               
136-407
               

               
Cow position:
               
chr13:56034836-56035097 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
16, 64
               

               
Conread position:
               
136-418
               

               
Cow position:
               
chr13:7076277-7075990 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
161, 17
               

               
Conread position:
               
137-361
               

               
Cow position:
               
chr13:24155552-24155314 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
137-386
               

               
Cow position:
               
chr13:12875954-12876202 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
128, 16
               

               
Conread position:
               
137-387
               

               
Cow position:
               
chr13:26726582-26726832 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
10, 64
               

               
Conread position:
               
137-404
               

               
Cow position:
               
chr13:22115716-22115432 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
14, 212
               

               
Conread position:
               
137-411
               

               
Cow position:
               
chr13:10924899-10925166 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 0
               

               
Conread position:
               
138-361
               

               
Cow position:
               
chr13:2341006-2340780 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
42, 11
               

               
Conread position:
               
138-387
               

               
Cow position:
               
chr13:48222525-48222769 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
7, 60
               

               
Conread position:
               
139-277
               

               
Cow position:
               
chr13:17622309-17622173 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
12, 61
               

               
Conread position:
               
139-287
               

               
Cow position:
               
chr13:11061008-11060861 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
98, 49
               

               
Conread position:
               
139-323
               

               
Cow position:
               
chr13:11096198-11096015 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
152, 14
               

               
Conread position:
               
139-359
               

               
Cow position:
               
chr13:50457879-50457657 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
12, 61
               

               
Conread position:
               
139-361
               

               
Cow position:
               
chr13:16038267-16038479 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
139-361
               

               
Cow position:
               
chr13:17338448-17338229 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
139-361
               

               
Cow position:
               
chr13:20288355-20288142 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
51, 0
               

               
Conread position:
               
139-374
               

               
Cow position:
               
chr13:15757140-15756908 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
157, 54
               

               
Conread position:
               
139-379
               

               
Cow position:
               
chr13:15621830-15621591 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
9, 54
               

               
Conread position:
               
139-379
               

               
Cow position:
               
chr13:34728826-34729054 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
12, 64
               

               
Conread position:
               
139-381
               

               
Cow position:
               
chr13:3315656-3315906 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
160, 15
               

               
Conread position:
               
139-383
               

               
Cow position:
               
chr13:28440517-28440752 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
12, 50
               

               
Conread position:
               
139-384
               

               
Cow position:
               
chr13:14063501-14063739 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
50, 0
               

               
Conread position:
               
139-385
               

               
Cow position:
               
chr13:2774151-2773897 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
62, 232
               

               
Conread position:
               
139-388
               

               
Cow position:
               
chr13:7332982-7333234 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
53, 14
               

               
Conread position:
               
139-389
               

               
Cow position:
               
chr13:14940827-14940572 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
53, 134
               

               
Conread position:
               
139-389
               

               
Cow position:
               
chr13:37069364-37069116 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
228, 14
               

               
Conread position:
               
139-392
               

               
Cow position:
               
chr13:44278369-44278116 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
54, 9
               

               
Conread position:
               
139-394
               

               
Cow position:
               
chr13:21980955-21981201 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
12, 52
               

               
Conread position:
               
139-403
               

               
Cow position:
               
chr13:18995144-18994886 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 62
               

               
Conread position:
               
139-404
               

               
Cow position:
               
chr13:151983-151729 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
51, 0
               

               
Conread position:
               
139-404
               

               
Cow position:
               
chr13:29831412-29831664 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
104, 38
               

               
Conread position:
               
139-404
               

               
Cow position:
               
chr13:45353052-45352790 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
16, 55
               

               
Conread position:
               
140-288
               

               
Cow position:
               
chr13:827261-827118 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
140-297
               

               
Cow position:
               
chr13:21283684-21283840 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
11, 60
               

               
Conread position:
               
140-304
               

               
Cow position:
               
chr13:43184856-43185023 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
58, 136
               

               
Conread position:
               
140-312
               

               
Cow position:
               
chr13:17439753-17439919 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
140-312
               

               
Cow position:
               
chr13:19750734-19750564 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
89, 59
               

               
Conread position:
               
140-361
               

               
Cow position:
               
chr13:19174673-19174891 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
9, 50
               

               
Conread position:
               
140-365
               

               
Cow position:
               
chr13:5279174-5279406 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
46, 0
               

               
Conread position:
               
140-375
               

               
Cow position:
               
chr13:21288066-21288299 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
222, 54
               

               
Conread position:
               
140-383
               

               
Cow position:
               
chr13:54582891-54582656 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
124, 50
               

               
Conread position:
               
140-384
               

               
Cow position:
               
chr13:1147134-1147369 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
223, 9
               

               
Conread position:
               
140-386
               

               
Cow position:
               
chr13:33974750-33974521 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
222, 9
               

               
Conread position:
               
140-386
               

               
Cow position:
               
chr13:49503513-49503762 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
165, 42
               

               
Conread position:
               
140-393
               

               
Cow position:
               
chr13:1568939-1568708 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
140-399
               

               
Cow position:
               
chr13:12201063-12201335 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
18, 238
               

               
Conread position:
               
140-409
               

               
Cow position:
               
chr13:54286712-54286968 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
138, 12
               

               
Conread position:
               
140-429
               

               
Cow position:
               
chr13:17498234-17497958 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
135, 18
               

               
Conread position:
               
141-297
               

               
Cow position:
               
chr13:56148541-56148385 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
141-297
               

               
Cow position:
               
chr13:56160426-56160582 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
141-312
               

               
Cow position:
               
chr13:21295095-21294924 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
17, 60
               

               
Conread position:
               
141-324
               

               
Cow position:
               
chr13:37503569-37503745 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
89, 12
               

               
Conread position:
               
141-341
               

               
Cow position:
               
chr13:47193397-47193220 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
141-361
               

               
Cow position:
               
chr13:27525239-27525455 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
9, 103
               

               
Conread position:
               
141-379
               

               
Cow position:
               
chr13:21171552-21171785 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
186, 0
               

               
Conread position:
               
141-380
               

               
Cow position:
               
chr13:15083677-15083445 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
221, 58
               

               
Conread position:
               
141-381
               

               
Cow position:
               
chr13:12673276-12673508 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
10, 62
               

               
Conread position:
               
141-385
               

               
Cow position:
               
chr13:30258868-30258625 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
116, 13
               

               
Conread position:
               
141-387
               

               
Cow position:
               
chr13:37621342-37621596 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
154, 49
               

               
Conread position:
               
141-388
               

               
Cow position:
               
chr13:43595094-43595332 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
221, 13
               

               
Conread position:
               
141-389
               

               
Cow position:
               
chr13:58662260-58662020 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
152, 12
               

               
Conread position:
               
141-394
               

               
Cow position:
               
chr13:20893618-20893874 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
51, 12
               

               
Conread position:
               
141-403
               

               
Cow position:
               
chr13:17569085-17569333 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
141-404
               

               
Cow position:
               
chr13:40491232-40490978 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
124, 12
               

               
Conread position:
               
141-409
               

               
Cow position:
               
chr13:14927277-14927021 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
61, 12
               

               
Conread position:
               
142-291
               

               
Cow position:
               
chr13:25428208-25428353 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
142-294
               

               
Cow position:
               
chr13:39367979-39367826 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
62, 11
               

               
Conread position:
               
142-296
               

               
Cow position:
               
chr13:28683378-28683227 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
142-297
               

               
Cow position:
               
chr13:3211566-3211413 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
57, 0
               

               
Conread position:
               
142-297
               

               
Cow position:
               
chr13:11643958-11643803 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
10, 59
               

               
Conread position:
               
142-312
               

               
Cow position:
               
chr13:12925792-12925628 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
95, 11
               

               
Conread position:
               
142-320
               

               
Cow position:
               
chr13:51813918-51814087 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
9, 58
               

               
Conread position:
               
142-346
               

               
Cow position:
               
chr13:23479047-23478847 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
5, 12
               

               
Conread position:
               
142-360
               

               
Cow position:
               
chr13:19023831-19024047 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
54, 0
               

               
Conread position:
               
142-361
               

               
Cow position:
               
chr13:18615400-18615175 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
90, 11
               

               
Conread position:
               
142-361
               

               
Cow position:
               
chr13:48409394-48409172 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
50, 11
               

               
Conread position:
               
142-386
               

               
Cow position:
               
chr13:9900165-9899921 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
11, 23
               

               
Conread position:
               
142-387
               

               
Cow position:
               
chr13:6616738-6616989 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
54, 11
               

               
Conread position:
               
142-387
               

               
Cow position:
               
chr13:52459468-52459693 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
131, 11
               

               
Conread position:
               
142-404
               

               
Cow position:
               
chr13:47186251-47185987 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
95, 57
               

               
Conread position:
               
142-424
               

               
Cow position:
               
chr13:18999552-18999272 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
137, 54
               

               
Conread position:
               
143-289
               

               
Cow position:
               
chr13:23270194-23270333 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
10, 0
               

               
Conread position:
               
143-308
               

               
Cow position:
               
chr13:24110497-24110333 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
11, 57
               

               
Conread position:
               
143-346
               

               
Cow position:
               
chr13:20666373-20666567 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
47, 0
               

               
Conread position:
               
143-361
               

               
Cow position:
               
chr13:26847801-26848027 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
11, 39
               

               
Conread position:
               
143-361
               

               
Cow position:
               
chr13:38329632-38329422 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
47, 0
               

               
Conread position:
               
143-369
               

               
Cow position:
               
chr13:58149315-58149098 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
224, 10
               

               
Conread position:
               
143-375
               

               
Cow position:
               
chr13:25941249-25941476 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
143-385
               

               
Cow position:
               
chr13:62008123-62007888 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
56, 0
               

               
Conread position:
               
143-387
               

               
Cow position:
               
chr13:17611536-17611777 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
219, 47
               

               
Conread position:
               
143-401
               

               
Cow position:
               
chr13:1462281-1462527 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
46, 0
               

               
Conread position:
               
143-403
               

               
Cow position:
               
chr13:46525413-46525671 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
218, 45
               

               
Conread position:
               
143-404
               

               
Cow position:
               
chr13:3209305-3209564 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
127, 18
               

               
Conread position:
               
143-404
               

               
Cow position:
               
chr13:54128580-54128841 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
219, 53
               

               
Conread position:
               
143-411
               

               
Cow position:
               
chr13:15997050-15996789 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
130, 53
               

               
Conread position:
               
143-417
               

               
Cow position:
               
chr13:7046886-7046629 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
77, 25
               

               
Conread position:
               
144-286
               

               
Cow position:
               
chr13:7663407-7663546 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
46, 0
               

               
Conread position:
               
144-296
               

               
Cow position:
               
chr13:17563754-17563605 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
55, 0
               

               
Conread position:
               
144-333
               

               
Cow position:
               
chr13:52057571-52057389 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
144-351
               

               
Cow position:
               
chr13:1155690-1155893 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
130, 9
               

               
Conread position:
               
144-361
               

               
Cow position:
               
chr13:6465675-6465879 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
55, 0
               

               
Conread position:
               
144-361
               

               
Cow position:
               
chr13:13954378-13954592 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
141, 52
               

               
Conread position:
               
144-361
               

               
Cow position:
               
chr13:18299420-18299198 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
45, 126
               

               
Conread position:
               
144-361
               

               
Cow position:
               
chr13:42672409-42672626 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
129, 9
               

               
Conread position:
               
144-361
               

               
Cow position:
               
chr13:51128052-51128272 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
31, 9
               

               
Conread position:
               
144-365
               

               
Cow position:
               
chr13:11260281-11260078 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
35, 0
               

               
Conread position:
               
144-374
               

               
Cow position:
               
chr13:55494511-55494727 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
46, 0
               

               
Conread position:
               
144-376
               

               
Cow position:
               
chr13:9975058-9975283 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
10, 56
               

               
Conread position:
               
144-381
               

               
Cow position:
               
chr13:25604606-25604821 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
144-382
               

               
Cow position:
               
chr13:15991216-15991447 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
68, 37
               

               
Conread position:
               
144-383
               

               
Cow position:
               
chr13:17437838-17438080 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
27, 58
               

               
Conread position:
               
144-384
               

               
Cow position:
               
chr13:44202016-44201787 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
207, 35
               

               
Conread position:
               
144-385
               

               
Cow position:
               
chr13:59461252-59461025 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
214, 9
               

               
Conread position:
               
144-386
               

               
Cow position:
               
chr13:19240449-19240219 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
36, 9
               

               
Conread position:
               
144-386
               

               
Cow position:
               
chr13:27181055-27180818 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
144-387
               

               
Cow position:
               
chr13:1231660-1231419 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
35, 9
               

               
Conread position:
               
144-387
               

               
Cow position:
               
chr13:9142293-9142052 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
159, 9
               

               
Conread position:
               
144-387
               

               
Cow position:
               
chr13:16247671-16247421 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
33, 9
               

               
Conread position:
               
144-387
               

               
Cow position:
               
chr13:23960791-23961028 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
151, 44
               

               
Conread position:
               
144-387
               

               
Cow position:
               
chr13:33601218-33601456 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
93, 32
               

               
Conread position:
               
144-387
               

               
Cow position:
               
chr13:41190120-41189881 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
138, 55
               

               
Conread position:
               
144-387
               

               
Cow position:
               
chr13:52749460-52749689 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
218, 9
               

               
Conread position:
               
144-387
               

               
Cow position:
               
chr13:55583208-55582968 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
134, 9
               

               
Conread position:
               
144-399
               

               
Cow position:
               
chr13:14645066-14644820 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
68, 41
               

               
Conread position:
               
144-409
               

               
Cow position:
               
chr13:13471399-13471664 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
137, 55
               

               
Conread position:
               
144-409
               

               
Cow position:
               
chr13:27550754-27550492 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
248, 55
               

               
Conread position:
               
144-415
               

               
Cow position:
               
chr13:47675919-47676189 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
10, 47
               

               
Conread position:
               
145-291
               

               
Cow position:
               
chr13:12207062-12206918 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
54, 0
               

               
Conread position:
               
145-333
               

               
Cow position:
               
chr13:20288664-20288480 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
68, 8
               

               
Conread position:
               
145-354
               

               
Cow position:
               
chr13:43893307-43893522 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
7, 30
               

               
Conread position:
               
145-359
               

               
Cow position:
               
chr13:15974626-15974424 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
115, 23
               

               
Conread position:
               
145-359
               

               
Cow position:
               
chr13:18340547-18340336 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
8.00001e-41
               

               
Alignm gaps (pig, cow):
               
198, 54
               

               
Conread position:
               
145-359
               

               
Cow position:
               
chr13:61188547-61188334 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
140, 51
               

               
Conread position:
               
145-361
               

               
Cow position:
               
chr13:13478662-13478877 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
48, 8
               

               
Conread position:
               
145-361
               

               
Cow position:
               
chr13:18929539-18929329 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
16, 8
               

               
Conread position:
               
145-361
               

               
Cow position:
               
chr13:19778834-19779051 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
49, 13
               

               
Conread position:
               
145-361
               

               
Cow position:
               
chr13:44626382-44626169 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
18, 13
               

               
Conread position:
               
145-371
               

               
Cow position:
               
chr13:19876317-19876543 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
24, 55
               

               
Conread position:
               
145-371
               

               
Cow position:
               
chr13:56958981-56958771 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
222, 8
               

               
Conread position:
               
145-376
               

               
Cow position:
               
chr13:15192874-15193103 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
216, 66
               

               
Conread position:
               
145-384
               

               
Cow position:
               
chr13:20261309-20261552 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
44, 8
               

               
Conread position:
               
145-387
               

               
Cow position:
               
chr13:20805392-20805639 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
50, 8
               

               
Conread position:
               
145-388
               

               
Cow position:
               
chr13:54145463-54145703 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
81, 8
               

               
Conread position:
               
145-389
               

               
Cow position:
               
chr13:4552827-4552598 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
217, 8
               

               
Conread position:
               
145-390
               

               
Cow position:
               
chr13:14411909-14411662 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
130, 45
               

               
Conread position:
               
145-390
               

               
Cow position:
               
chr13:18166745-18166508 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
242, 8
               

               
Conread position:
               
145-390
               

               
Cow position:
               
chr13:21275872-21275632 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
8, 0
               

               
Conread position:
               
145-391
               

               
Cow position:
               
chr13:20579920-20579694 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
8, 0
               

               
Conread position:
               
145-397
               

               
Cow position:
               
chr13:23804994-23805256 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
41, 8
               

               
Conread position:
               
145-409
               

               
Cow position:
               
chr13:20360293-20360026 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
92, 48
               

               
Conread position:
               
145-413
               

               
Cow position:
               
chr13:26261774-26262038 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
57, 0
               

               
Conread position:
               
145-446
               

               
Cow position:
               
chr13:271091-270784 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
44, 8
               

               
Conread position:
               
146-288
               

               
Cow position:
               
chr13:8233010-8232875 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
7, 0
               

               
Conread position:
               
146-297
               

               
Cow position:
               
chr13:36666261-36666410 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
53, 0
               

               
Conread position:
               
146-356
               

               
Cow position:
               
chr13:24230227-24230018 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
159, 53
               

               
Conread position:
               
146-383
               

               
Cow position:
               
chr13:6079398-6079622 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
6, 54
               

               
Conread position:
               
146-387
               

               
Cow position:
               
chr13:42114032-42113795 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
128, 50
               

               
Conread position:
               
146-408
               

               
Cow position:
               
chr13:21127329-21127583 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
140, 9
               

               
Conread position:
               
147-361
               

               
Cow position:
               
chr13:20509751-20509531 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
40, 6
               

               
Conread position:
               
147-378
               

               
Cow position:
               
chr13:39826565-39826343 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
106, 6
               

               
Conread position:
               
148-385
               

               
Cow position:
               
chr13:10522944-10522715 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
213, 13
               

               
Conread position:
               
149-297
               

               
Cow position:
               
chr13:2414039-2413893 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
136, 50
               

               
Conread position:
               
149-312
               

               
Cow position:
               
chr13:37640598-37640439 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
149-359
               

               
Cow position:
               
chr13:18548715-18548507 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
49, 0
               

               
Conread position:
               
149-359
               

               
Cow position:
               
chr13:21708211-21708010 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
47, 0
               

               
Conread position:
               
149-361
               

               
Cow position:
               
chr13:6442100-6442303 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
46, 0
               

               
Conread position:
               
149-361
               

               
Cow position:
               
chr13:8667628-8667419 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
28, 55
               

               
Conread position:
               
149-373
               

               
Cow position:
               
chr13:6926527-6926304 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
142, 41
               

               
Conread position:
               
149-375
               

               
Cow position:
               
chr13:34261244-34261021 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
45, 147
               

               
Conread position:
               
149-377
               

               
Cow position:
               
chr13:17977360-17977126 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
141, 38
               

               
Conread position:
               
149-382
               

               
Cow position:
               
chr13:47243545-47243773 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
208, 50
               

               
Conread position:
               
149-384
               

               
Cow position:
               
chr13:25926800-25926564 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
126, 50
               

               
Conread position:
               
149-385
               

               
Cow position:
               
chr13:20520071-20519847 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
199, 41
               

               
Conread position:
               
149-386
               

               
Cow position:
               
chr13:45593927-45593704 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
108, 50
               

               
Conread position:
               
149-387
               

               
Cow position:
               
chr13:32017502-32017736 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
125, 55
               

               
Conread position:
               
149-403
               

               
Cow position:
               
chr13:4417121-4416872 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
24, 9
               

               
Conread position:
               
149-404
               

               
Cow position:
               
chr13:20137833-20137580 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
252, 214
               

               
Conread position:
               
150-292
               

               
Cow position:
               
chr13:6342080-6342219 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
41, 0
               

               
Conread position:
               
150-294
               

               
Cow position:
               
chr13:9643878-9644013 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
41, 0
               

               
Conread position:
               
150-294
               

               
Cow position:
               
chr13:45725904-45725753 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
39, 77
               

               
Conread position:
               
150-309
               

               
Cow position:
               
chr13:40722698-40722855 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
87, 40
               

               
Conread position:
               
150-340
               

               
Cow position:
               
chr13:25547573-25547761 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
52, 0
               

               
Conread position:
               
150-359
               

               
Cow position:
               
chr13:51015170-51015378 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
132, 46
               

               
Conread position:
               
150-361
               

               
Cow position:
               
chr13:2776297-2776088 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
150-361
               

               
Cow position:
               
chr13:20115263-20115048 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
43, 0
               

               
Conread position:
               
150-361
               

               
Cow position:
               
chr13:20250919-20250705 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
26, 98
               

               
Conread position:
               
150-361
               

               
Cow position:
               
chr13:24215664-24215873 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
49, 0
               

               
Conread position:
               
150-361
               

               
Cow position:
               
chr13:52637309-52637101 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
49, 0
               

               
Conread position:
               
150-361
               

               
Cow position:
               
chr13:54353032-54353240 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
46, 0
               

               
Conread position:
               
150-377
               

               
Cow position:
               
chr13:20497661-20497426 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
42, 123
               

               
Conread position:
               
150-378
               

               
Cow position:
               
chr13:8699728-8699955 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
145, 49
               

               
Conread position:
               
150-383
               

               
Cow position:
               
chr13:42200628-42200403 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
49, 0
               

               
Conread position:
               
150-387
               

               
Cow position:
               
chr13:9707740-9707967 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
189, 49
               

               
Conread position:
               
150-387
               

               
Cow position:
               
chr13:11543589-11543333 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
38, 125
               

               
Conread position:
               
150-387
               

               
Cow position:
               
chr13:20314613-20314848 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
189, 40
               

               
Conread position:
               
150-387
               

               
Cow position:
               
chr13:34873598-34873364 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
49, 0
               

               
Conread position:
               
150-387
               

               
Cow position:
               
chr13:40541096-40541329 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
46, 0
               

               
Conread position:
               
150-389
               

               
Cow position:
               
chr13:19883028-19883257 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
49, 0
               

               
Conread position:
               
150-389
               

               
Cow position:
               
chr13:37985735-37985974 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
162, 47
               

               
Conread position:
               
150-397
               

               
Cow position:
               
chr13:26100403-26100156 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
37, 11
               

               
Conread position:
               
150-401
               

               
Cow position:
               
chr13:24753896-24753658 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
49, 0
               

               
Conread position:
               
150-401
               

               
Cow position:
               
chr13:52640939-52641190 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
222, 49
               

               
Conread position:
               
150-402
               

               
Cow position:
               
chr13:25579181-25579430 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
219, 46
               

               
Conread position:
               
150-407
               

               
Cow position:
               
chr13:13338865-13338618 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
46, 0
               

               
Conread position:
               
150-437
               

               
Cow position:
               
chr13:21866618-21866904 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
42, 123
               

               
Conread position:
               
152-381
               

               
Cow position:
               
chr13:39376530-39376297 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
27, 47
               

               
Conread position:
               
152-404
               

               
Cow position:
               
chr13:773363-773121 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
125, 44
               

               
Conread position:
               
153-285
               

               
Cow position:
               
chr13:8652436-8652567 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
134
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
127, 46
               

               
Conread position:
               
153-304
               

               
Cow position:
               
chr13:18517051-18516905 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
46, 0
               

               
Conread position:
               
153-308
               

               
Cow position:
               
chr13:12546902-12547055 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
106, 44
               

               
Conread position:
               
153-312
               

               
Cow position:
               
chr13:26369529-26369373 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
46, 0
               

               
Conread position:
               
153-361
               

               
Cow position:
               
chr13:5263275-5263475 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
43, 0
               

               
Conread position:
               
153-361
               

               
Cow position:
               
chr13:37592940-37593142 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
84, 46
               

               
Conread position:
               
153-361
               

               
Cow position:
               
chr13:49356043-49356245 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
43, 0
               

               
Conread position:
               
153-375
               

               
Cow position:
               
chr13:7104660-7104444 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
209, 46
               

               
Conread position:
               
153-378
               

               
Cow position:
               
chr13:40154724-40154956 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
129, 51
               

               
Conread position:
               
153-380
               

               
Cow position:
               
chr13:15041467-15041689 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
153-382
               

               
Cow position:
               
chr13:55765172-55765394 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
79, 46
               

               
Conread position:
               
153-385
               

               
Cow position:
               
chr13:6486245-6486477 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
158, 46
               

               
Conread position:
               
153-386
               

               
Cow position:
               
chr13:26480204-26480428 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
201, 46
               

               
Conread position:
               
153-387
               

               
Cow position:
               
chr13:620249-620469 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
153-387
               

               
Cow position:
               
chr13:15349242-15349475 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
84, 37
               

               
Conread position:
               
153-387
               

               
Cow position:
               
chr13:19033562-19033334 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
153-393
               

               
Cow position:
               
chr13:4158666-4158424 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
194, 43
               

               
Conread position:
               
153-394
               

               
Cow position:
               
chr13:15143837-15144065 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
208, 37
               

               
Conread position:
               
153-404
               

               
Cow position:
               
chr13:49796029-49795800 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
46, 0
               

               
Conread position:
               
153-409
               

               
Cow position:
               
chr13:19188307-19188058 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
146, 37
               

               
Conread position:
               
153-417
               

               
Cow position:
               
chr13:16908223-16907960 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
214, 46
               

               
Conread position:
               
154-312
               

               
Cow position:
               
chr13:37381806-37381650 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
154-344
               

               
Cow position:
               
chr13:43919256-43919445 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
135, 48
               

               
Conread position:
               
154-361
               

               
Cow position:
               
chr13:6980924-6980729 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
36, 0
               

               
Conread position:
               
154-361
               

               
Cow position:
               
chr13:10989069-10989270 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
151, 36
               

               
Conread position:
               
154-361
               

               
Cow position:
               
chr13:38872943-38873153 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
145, 36
               

               
Conread position:
               
154-383
               

               
Cow position:
               
chr13:28071878-28071655 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
208, 132
               

               
Conread position:
               
154-387
               

               
Cow position:
               
chr13:16096583-16096356 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
55, 174
               

               
Conread position:
               
154-388
               

               
Cow position:
               
chr13:50768601-50768370 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
121, 43
               

               
Conread position:
               
154-397
               

               
Cow position:
               
chr13:39398658-39398394 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
20, 47
               

               
Conread position:
               
155-384
               

               
Cow position:
               
chr13:13775239-13775473 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
131, 43
               

               
Conread position:
               
155-387
               

               
Cow position:
               
chr13:28536318-28536541 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
41, 0
               

               
Conread position:
               
155-403
               

               
Cow position:
               
chr13:27419080-27419330 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
113, 29
               

               
Conread position:
               
155-411
               

               
Cow position:
               
chr13:17813475-17813224 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
218, 44
               

               
Conread position:
               
156-361
               

               
Cow position:
               
chr13:27869969-27869762 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
29, 151
               

               
Conread position:
               
156-361
               

               
Cow position:
               
chr13:52536568-52536375 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
54, 141
               

               
Conread position:
               
156-377
               

               
Cow position:
               
chr13:20784593-20784383 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
156-390
               

               
Cow position:
               
chr13:26093625-26093384 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
36, 134
               

               
Conread position:
               
156-418
               

               
Cow position:
               
chr13:11434571-11434831 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
8, 43
               

               
Conread position:
               
157-353
               

               
Cow position:
               
chr13:23167099-23167309 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
97, 38
               

               
Conread position:
               
157-371
               

               
Cow position:
               
chr13:20795207-20795412 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
42, 0
               

               
Conread position:
               
157-386
               

               
Cow position:
               
chr13:20534897-20534673 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
197, 28
               

               
Conread position:
               
157-388
               

               
Cow position:
               
chr13:45130517-45130294 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
7, 40
               

               
Conread position:
               
157-392
               

               
Cow position:
               
chr13:30315509-30315270 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
107, 42
               

               
Conread position:
               
157-400
               

               
Cow position:
               
chr13:6189598-6189835 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
216, 23
               

               
Conread position:
               
157-428
               

               
Cow position:
               
chr13:12770185-12770460 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
18, 87
               

               
Conread position:
               
158-347
               

               
Cow position:
               
chr13:7190968-7190785 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
46, 10
               

               
Conread position:
               
159-354
               

               
Cow position:
               
chr13:62369669-62369474 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
5, 40
               

               
Conread position:
               
159-359
               

               
Cow position:
               
chr13:33256496-33256303 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
30, 0
               

               
Conread position:
               
160-363
               

               
Cow position:
               
chr13:37751068-37751268 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
139, 39
               

               
Conread position:
               
160-387
               

               
Cow position:
               
chr13:21170527-21170307 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
45, 61
               

               
Conread position:
               
160-387
               

               
Cow position:
               
chr13:47007720-47007934 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
30, 0
               

               
Conread position:
               
161-355
               

               
Cow position:
               
chr13:23215019-23214824 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
66, 35
               

               
Conread position:
               
161-358
               

               
Cow position:
               
chr13:17855370-17855174 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
77, 35
               

               
Conread position:
               
161-374
               

               
Cow position:
               
chr13:19022269-19022056 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
144, 29
               

               
Conread position:
               
161-382
               

               
Cow position:
               
chr13:52283910-52283690 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
116, 35
               

               
Conread position:
               
161-383
               

               
Cow position:
               
chr13:37614192-37614416 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
34, 152
               

               
Conread position:
               
161-403
               

               
Cow position:
               
chr13:2822868-2822632 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
144, 35
               

               
Conread position:
               
161-408
               

               
Cow position:
               
chr13:33868417-33868174 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
82, 35
               

               
Conread position:
               
162-346
               

               
Cow position:
               
chr13:55162209-55162024 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
113, 28
               

               
Conread position:
               
162-387
               

               
Cow position:
               
chr13:40937120-40937343 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
193, 40
               

               
Conread position:
               
162-393
               

               
Cow position:
               
chr13:13196236-13196007 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
200, 28
               

               
Conread position:
               
163-355
               

               
Cow position:
               
chr13:5447551-5447361 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
158, 33
               

               
Conread position:
               
164-378
               

               
Cow position:
               
chr13:4790122-4790335 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
118, 29
               

               
Conread position:
               
164-409
               

               
Cow position:
               
chr13:2393381-2393147 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
56, 32
               

               
Conread position:
               
165-360
               

               
Cow position:
               
chr13:8408617-8408424 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
31, 0
               

               
Conread position:
               
165-361
               

               
Cow position:
               
chr13:4404525-4404338 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
31, 0
               

               
Conread position:
               
165-413
               

               
Cow position:
               
chr13:28439403-28439167 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
208, 34
               

               
Conread position:
               
166-374
               

               
Cow position:
               
chr13:33854691-33854889 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
97, 24
               

               
Conread position:
               
166-389
               

               
Cow position:
               
chr13:30148570-30148782 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
167-361
               

               
Cow position:
               
chr13:43787845-43788044 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
122, 35
               

               
Conread position:
               
167-378
               

               
Cow position:
               
chr13:43839684-43839904 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
122, 35
               

               
Conread position:
               
167-383
               

               
Cow position:
               
chr13:21246716-21246932 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
26, 13
               

               
Conread position:
               
167-387
               

               
Cow position:
               
chr13:2776851-2776631 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
10, 21
               

               
Conread position:
               
167-387
               

               
Cow position:
               
chr13:21235679-21235890 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
150, 27
               

               
Conread position:
               
167-413
               

               
Cow position:
               
chr13:30711218-30710972 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
10, 33
               

               
Conread position:
               
168-325
               

               
Cow position:
               
chr13:9884526-9884370 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
5, 25
               

               
Conread position:
               
168-333
               

               
Cow position:
               
chr13:37980767-37980927 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
86, 31
               

               
Conread position:
               
168-358
               

               
Cow position:
               
chr13:37803883-37803686 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
126, 40
               

               
Conread position:
               
168-362
               

               
Cow position:
               
chr13:38012323-38012142 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
31, 0
               

               
Conread position:
               
168-382
               

               
Cow position:
               
chr13:53850815-53850603 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
205, 22
               

               
Conread position:
               
169-359
               

               
Cow position:
               
chr13:4664867-4665044 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
169-431
               

               
Cow position:
               
chr13:311424-311167 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
119, 30
               

               
Conread position:
               
170-378
               

               
Cow position:
               
chr13:17057859-17058068 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
176, 31
               

               
Conread position:
               
170-378
               

               
Cow position:
               
chr13:24094328-24094530 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
197, 29
               

               
Conread position:
               
170-386
               

               
Cow position:
               
chr13:50622823-50623033 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
205, 29
               

               
Conread position:
               
170-387
               

               
Cow position:
               
chr13:20844877-20845090 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
110, 29
               

               
Conread position:
               
170-387
               

               
Cow position:
               
chr13:49824012-49823803 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
29, 0
               

               
Conread position:
               
170-387
               

               
Cow position:
               
chr13:54236792-54236583 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
193, 29
               

               
Conread position:
               
171-378
               

               
Cow position:
               
chr13:49283792-49283995 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
93, 19
               

               
Conread position:
               
171-387
               

               
Cow position:
               
chr13:12449000-12449207 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
28, 0
               

               
Conread position:
               
171-394
               

               
Cow position:
               
chr13:26959811-26960030 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
58, 17
               

               
Conread position:
               
171-411
               

               
Cow position:
               
chr13:6091416-6091651 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
13, 136
               

               
Conread position:
               
173-308
               

               
Cow position:
               
chr13:1075053-1075186 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
136
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
174-378
               

               
Cow position:
               
chr13:36345927-36345730 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
138, 20
               

               
Conread position:
               
174-378
               

               
Cow position:
               
chr13:48370312-48370517 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
52, 141
               

               
Conread position:
               
174-385
               

               
Cow position:
               
chr13:53865621-53865416 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
174-388
               

               
Cow position:
               
chr13:23975180-23975394 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
20, 11
               

               
Conread position:
               
174-394
               

               
Cow position:
               
chr13:16525236-16525456 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
112, 67
               

               
Conread position:
               
174-409
               

               
Cow position:
               
chr13:20110598-20110364 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
16, 62
               

               
Conread position:
               
175-360
               

               
Cow position:
               
chr13:20042281-20042459 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
175-387
               

               
Cow position:
               
chr13:20088731-20088943 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
84, 24
               

               
Conread position:
               
175-390
               

               
Cow position:
               
chr13:42302056-42302268 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
197, 24
               

               
Conread position:
               
175-392
               

               
Cow position:
               
chr13:46347115-46346899 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
105, 33
               

               
Conread position:
               
175-403
               

               
Cow position:
               
chr13:16003517-16003741 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
176-297
               

               
Cow position:
               
chr13:44434848-44434965 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
122
               

               
Alignm identity:
               
97
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
176-361
               

               
Cow position:
               
chr13:8637681-8637498 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
176-361
               

               
Cow position:
               
chr13:17845471-17845288 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
176-378
               

               
Cow position:
               
chr13:11410697-11410496 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
67, 23
               

               
Conread position:
               
176-387
               

               
Cow position:
               
chr13:3153733-3153524 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
83, 23
               

               
Conread position:
               
176-387
               

               
Cow position:
               
chr13:6113541-6113754 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
17, 11
               

               
Conread position:
               
176-409
               

               
Cow position:
               
chr13:18894295-18894069 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
221, 19
               

               
Conread position:
               
176-412
               

               
Cow position:
               
chr13:13796826-13797062 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
17, 12
               

               
Conread position:
               
177-343
               

               
Cow position:
               
chr13:47227375-47227547 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
74, 0
               

               
Conread position:
               
177-357
               

               
Cow position:
               
chr13:18970962-18970791 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
9, 78
               

               
Conread position:
               
177-360
               

               
Cow position:
               
chr13:52177585-52177407 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
26, 97
               

               
Conread position:
               
177-378
               

               
Cow position:
               
chr13:11147039-11146841 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
177-389
               

               
Cow position:
               
chr13:34532950-34533152 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
177-403
               

               
Cow position:
               
chr13:17223306-17223082 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
76, 22
               

               
Conread position:
               
178-342
               

               
Cow position:
               
chr13:17716533-17716695 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
178-361
               

               
Cow position:
               
chr13:52913854-52913680 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
178-382
               

               
Cow position:
               
chr13:37517196-37517406 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
119, 21
               

               
Conread position:
               
179-361
               

               
Cow position:
               
chr13:11670790-11670610 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
103, 20
               

               
Conread position:
               
179-368
               

               
Cow position:
               
chr13:50715132-50714944 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
15, 26
               

               
Conread position:
               
179-382
               

               
Cow position:
               
chr13:54627468-54627260 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
114, 20
               

               
Conread position:
               
179-387
               

               
Cow position:
               
chr13:52010860-52011072 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
84, 20
               

               
Conread position:
               
179-395
               

               
Cow position:
               
chr13:5079379-5079614 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
179-411
               

               
Cow position:
               
chr13:9124906-9124678 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
183, 58
               

               
Conread position:
               
180-387
               

               
Cow position:
               
chr13:10220940-10220737 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
180-396
               

               
Cow position:
               
chr13:45499208-45498995 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
176, 16
               

               
Conread position:
               
181-407
               

               
Cow position:
               
chr13:3775699-3775925 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
5, 77
               

               
Conread position:
               
182-404
               

               
Cow position:
               
chr13:21024963-21024748 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
11, 5
               

               
Conread position:
               
185-361
               

               
Cow position:
               
chr13:52027161-52027332 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
158, 114
               

               
Conread position:
               
186-391
               

               
Cow position:
               
chr13:5092419-5092621 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
186, 106
               

               
Conread position:
               
189-361
               

               
Cow position:
               
chr13:24107576-24107742 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
65, 71
               

               
Conread position:
               
189-411
               

               
Cow position:
               
chr13:23685027-23685245 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
174, 0
               

               
Conread position:
               
190-361
               

               
Cow position:
               
chr13:16834559-16834732 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
111, 0
               

               
Conread position:
               
190-410
               

               
Cow position:
               
chr13:20789539-20789762 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
18, 108
               

               
Conread position:
               
191-361
               

               
Cow position:
               
chr13:54682074-54681897 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
191-390
               

               
Cow position:
               
chr13:47644034-47643820 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
53, 178
               

               
Conread position:
               
192-333
               

               
Cow position:
               
chr13:16790178-16790045 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
103, 0
               

               
Conread position:
               
192-348
               

               
Cow position:
               
chr13:6975876-6976026 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
117, 0
               

               
Conread position:
               
192-361
               

               
Cow position:
               
chr13:38548559-38548389 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
104, 64
               

               
Conread position:
               
192-369
               

               
Cow position:
               
chr13:24371976-24372158 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
13, 17
               

               
Conread position:
               
192-377
               

               
Cow position:
               
chr13:10711446-10711628 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
161, 109
               

               
Conread position:
               
192-378
               

               
Cow position:
               
chr13:1363424-1363243 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
171, 94
               

               
Conread position:
               
192-378
               

               
Cow position:
               
chr13:1539210-1539024 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
93, 172
               

               
Conread position:
               
192-378
               

               
Cow position:
               
chr13:17994404-17994585 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
62, 67
               

               
Conread position:
               
192-381
               

               
Cow position:
               
chr13:41115811-41115622 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
88, 44
               

               
Conread position:
               
192-382
               

               
Cow position:
               
chr13:22046039-22046226 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
36, 137
               

               
Conread position:
               
192-383
               

               
Cow position:
               
chr13:16099152-16099347 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
101, 91
               

               
Conread position:
               
192-383
               

               
Cow position:
               
chr13:25520946-25521141 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
107, 176
               

               
Conread position:
               
192-386
               

               
Cow position:
               
chr13:16163551-16163368 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
103, 0
               

               
Conread position:
               
192-387
               

               
Cow position:
               
chr13:11565806-11565618 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
107, 0
               

               
Conread position:
               
192-387
               

               
Cow position:
               
chr13:19180456-19180652 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
81, 74
               

               
Conread position:
               
192-388
               

               
Cow position:
               
chr13:11202010-11201811 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
170, 116
               

               
Conread position:
               
192-389
               

               
Cow position:
               
chr13:369154-369351 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
170, 66
               

               
Conread position:
               
192-398
               

               
Cow position:
               
chr13:10715832-10715626 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
192, 118
               

               
Conread position:
               
192-398
               

               
Cow position:
               
chr13:27027929-27028140 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
27, 103
               

               
Conread position:
               
192-402
               

               
Cow position:
               
chr13:28695829-28695618 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
54, 45
               

               
Conread position:
               
192-403
               

               
Cow position:
               
chr13:37554905-37555112 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
170, 21
               

               
Conread position:
               
193-319
               

               
Cow position:
               
chr13:15808734-15808611 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
127
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
42, 0
               

               
Conread position:
               
193-361
               

               
Cow position:
               
chr13:8537790-8537622 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
193-366
               

               
Cow position:
               
chr13:1037607-1037436 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
110, 0
               

               
Conread position:
               
193-383
               

               
Cow position:
               
chr13:20367911-20368102 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
179, 170
               

               
Conread position:
               
193-402
               

               
Cow position:
               
chr13:24796846-24796648 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
62, 79
               

               
Conread position:
               
193-409
               

               
Cow position:
               
chr13:28605422-28605637 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
16, 171
               

               
Conread position:
               
194-383
               

               
Cow position:
               
chr13:3149464-3149652 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
178, 114
               

               
Conread position:
               
194-395
               

               
Cow position:
               
chr13:15162668-15162871 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
167, 17
               

               
Conread position:
               
194-404
               

               
Cow position:
               
chr13:390673-390879 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
63, 59
               

               
Conread position:
               
195-347
               

               
Cow position:
               
chr13:17135247-17135400 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
79, 0
               

               
Conread position:
               
195-361
               

               
Cow position:
               
chr13:16476823-16476657 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
195-378
               

               
Cow position:
               
chr13:48127074-48126892 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
168, 0
               

               
Conread position:
               
195-380
               

               
Cow position:
               
chr13:18215332-18215139 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
90, 156
               

               
Conread position:
               
196-365
               

               
Cow position:
               
chr13:13781145-13780977 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
92, 58
               

               
Conread position:
               
196-383
               

               
Cow position:
               
chr13:54127866-54128048 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
90, 15
               

               
Conread position:
               
196-385
               

               
Cow position:
               
chr13:28376595-28376781 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
89, 0
               

               
Conread position:
               
196-387
               

               
Cow position:
               
chr13:62251879-62252065 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
80, 67
               

               
Conread position:
               
196-404
               

               
Cow position:
               
chr13:20156144-20155941 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
61, 56
               

               
Conread position:
               
196-419
               

               
Cow position:
               
chr13:9492736-9492523 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
46, 0
               

               
Conread position:
               
197-378
               

               
Cow position:
               
chr13:48373354-48373528 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
46, 0
               

               
Conread position:
               
197-384
               

               
Cow position:
               
chr13:53357797-53357609 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
106, 115
               

               
Conread position:
               
197-387
               

               
Cow position:
               
chr13:19178142-19177947 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
43, 38
               

               
Conread position:
               
197-399
               

               
Cow position:
               
chr13:26316922-26317125 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
85, 72
               

               
Conread position:
               
197-409
               

               
Cow position:
               
chr13:38334912-38335126 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
165, 72
               

               
Conread position:
               
198-341
               

               
Cow position:
               
chr13:20875954-20876095 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
105, 0
               

               
Conread position:
               
198-379
               

               
Cow position:
               
chr13:38702666-38702850 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
98, 47
               

               
Conread position:
               
198-410
               

               
Cow position:
               
chr13:10511738-10511947 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
27, 45
               

               
Conread position:
               
199-387
               

               
Cow position:
               
chr13:33517994-33518179 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
106, 44
               

               
Conread position:
               
199-392
               

               
Cow position:
               
chr13:8367677-8367484 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
38, 26
               

               
Conread position:
               
199-422
               

               
Cow position:
               
chr13:1339179-1339404 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
168, 164
               

               
Conread position:
               
200-361
               

               
Cow position:
               
chr13:40483020-40483176 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
200-402
               

               
Cow position:
               
chr13:32186241-32186028 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
91, 174
               

               
Conread position:
               
202-387
               

               
Cow position:
               
chr13:14544094-14543914 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
131, 0
               

               
Conread position:
               
202-405
               

               
Cow position:
               
chr13:21425871-21426054 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
203-387
               

               
Cow position:
               
chr13:43576972-43576787 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
172, 160
               

               
Conread position:
               
204-361
               

               
Cow position:
               
chr13:26291270-26291114 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
53, 49
               

               
Conread position:
               
204-387
               

               
Cow position:
               
chr13:17624279-17624096 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
161, 65
               

               
Conread position:
               
205-382
               

               
Cow position:
               
chr13:28081678-28081499 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
99, 160
               

               
Conread position:
               
205-387
               

               
Cow position:
               
chr13:26395417-26395238 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
98, 0
               

               
Conread position:
               
205-389
               

               
Cow position:
               
chr13:14351538-14351354 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
70, 38
               

               
Conread position:
               
206-361
               

               
Cow position:
               
chr13:15114427-15114271 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
206-361
               

               
Cow position:
               
chr13:26109957-26109801 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
97, 14
               

               
Conread position:
               
207-382
               

               
Cow position:
               
chr13:17975009-17975178 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
97, 0
               

               
Conread position:
               
207-387
               

               
Cow position:
               
chr13:22729449-22729632 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
155, 6
               

               
Conread position:
               
207-387
               

               
Cow position:
               
chr13:41979191-41979363 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
155, 28
               

               
Conread position:
               
207-402
               

               
Cow position:
               
chr13:9551314-9551129 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
7, 0
               

               
Conread position:
               
208-381
               

               
Cow position:
               
chr13:53619957-53619784 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
165, 155
               

               
Conread position:
               
208-395
               

               
Cow position:
               
chr13:43811893-43811695 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
208-418
               

               
Cow position:
               
chr13:13533712-13533919 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
66, 53
               

               
Conread position:
               
212-382
               

               
Cow position:
               
chr13:19588821-19588652 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
63, 56
               

               
Conread position:
               
212-411
               

               
Cow position:
               
chr13:56019045-56019246 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
161, 104
               

               
Conread position:
               
213-361
               

               
Cow position:
               
chr13:20520263-20520114 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
93, 0
               

               
Conread position:
               
213-387
               

               
Cow position:
               
chr13:23399714-23399544 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
160, 88
               

               
Conread position:
               
213-387
               

               
Cow position:
               
chr13:26377468-26377641 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
44, 59
               

               
Conread position:
               
214-368
               

               
Cow position:
               
chr13:10055368-10055214 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
40, 45
               

               
Conread position:
               
215-361
               

               
Cow position:
               
chr13:6972329-6972184 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
120, 0
               

               
Conread position:
               
215-361
               

               
Cow position:
               
chr13:20214385-20214238 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
59, 53
               

               
Conread position:
               
215-361
               

               
Cow position:
               
chr13:57446173-57446309 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
75, 0
               

               
Conread position:
               
215-381
               

               
Cow position:
               
chr13:8682401-8682236 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
60, 48
               

               
Conread position:
               
215-387
               

               
Cow position:
               
chr13:5659821-5659992 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
148, 83
               

               
Conread position:
               
215-387
               

               
Cow position:
               
chr13:32914310-32914483 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
49, 55
               

               
Conread position:
               
215-388
               

               
Cow position:
               
chr13:6377653-6377481 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
65, 53
               

               
Conread position:
               
216-390
               

               
Cow position:
               
chr13:56431880-56432046 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
170, 83
               

               
Conread position:
               
216-396
               

               
Cow position:
               
chr13:43342513-43342333 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
147, 55
               

               
Conread position:
               
218-410
               

               
Cow position:
               
chr13:53847178-53847369 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
144, 80
               

               
Conread position:
               
219-387
               

               
Cow position:
               
chr13:29665963-29665796 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
144, 0
               

               
Conread position:
               
219-389
               

               
Cow position:
               
chr13:10986559-10986732 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
63, 0
               

               
Conread position:
               
220-387
               

               
Cow position:
               
chr13:14782283-14782127 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
79, 0
               

               
Conread position:
               
220-387
               

               
Cow position:
               
chr13:23478843-23478678 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
150, 89
               

               
Conread position:
               
220-398
               

               
Cow position:
               
chr13:23823093-23823264 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
141, 36
               

               
Conread position:
               
220-423
               

               
Cow position:
               
chr13:9108734-9108938 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
141, 51
               

               
Conread position:
               
220-423
               

               
Cow position:
               
chr13:21886736-21886934 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
53, 42
               

               
Conread position:
               
221-424
               

               
Cow position:
               
chr13:43102923-43102722 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
169, 33
               

               
Conread position:
               
222-374
               

               
Cow position:
               
chr13:25313210-25313357 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
52, 0
               

               
Conread position:
               
222-386
               

               
Cow position:
               
chr13:42614023-42613866 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
222-419
               

               
Cow position:
               
chr13:42203964-42203774 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
63, 82
               

               
Conread position:
               
223-389
               

               
Cow position:
               
chr13:20854518-20854682 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
72, 52
               

               
Conread position:
               
223-417
               

               
Cow position:
               
chr13:7097524-7097336 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
86, 0
               

               
Conread position:
               
224-378
               

               
Cow position:
               
chr13:38396094-38395936 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
138, 69
               

               
Conread position:
               
227-387
               

               
Cow position:
               
chr13:15869048-15868887 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
87, 137
               

               
Conread position:
               
228-385
               

               
Cow position:
               
chr13:45141989-45142155 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
51, 145
               

               
Conread position:
               
228-408
               

               
Cow position:
               
chr13:242568-242393 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
135, 0
               

               
Conread position:
               
229-361
               

               
Cow position:
               
chr13:24591529-24591398 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
133
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
56, 0
               

               
Conread position:
               
230-387
               

               
Cow position:
               
chr13:55327372-55327216 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
143, 24
               

               
Conread position:
               
230-421
               

               
Cow position:
               
chr13:8423336-8423151 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
132, 0
               
Show alignments to all cow chromosomes.