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Cow genome map

           
Conread name:
           
rche35_a23.y1
        

               
Conread position:
               
67-361
               

               
Cow position:
               
chr16:51143692-51143982 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
125, 17
               

               
Conread position:
               
109-358
               

               
Cow position:
               
chr16:13886525-13886276 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
22, 6
               

               
Conread position:
               
114-357
               

               
Cow position:
               
chr16:24702793-24703029 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
38, 77
               

               
Conread position:
               
114-385
               

               
Cow position:
               
chr16:42176585-42176866 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
13, 79
               

               
Conread position:
               
114-387
               

               
Cow position:
               
chr16:9497325-9497047 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
131, 5
               

               
Conread position:
               
114-387
               

               
Cow position:
               
chr16:47181225-47180956 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
8, 41
               

               
Conread position:
               
115-423
               

               
Cow position:
               
chr16:17460112-17460421 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
17, 30
               

               
Conread position:
               
116-284
               

               
Cow position:
               
chr16:11102880-11102712 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
36, 82
               

               
Conread position:
               
116-307
               

               
Cow position:
               
chr16:22804656-22804466 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
14, 54
               

               
Conread position:
               
116-382
               

               
Cow position:
               
chr16:1548932-1548677 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
256, 33
               

               
Conread position:
               
116-383
               

               
Cow position:
               
chr16:25154803-25154544 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
109, 37
               

               
Conread position:
               
116-387
               

               
Cow position:
               
chr16:47834872-47835128 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
251, 37
               

               
Conread position:
               
117-371
               

               
Cow position:
               
chr16:20647866-20648099 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
25, 37
               

               
Conread position:
               
119-361
               

               
Cow position:
               
chr16:55042624-55042383 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
5, 79
               

               
Conread position:
               
119-386
               

               
Cow position:
               
chr16:23483226-23483493 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
5, 81
               

               
Conread position:
               
121-395
               

               
Cow position:
               
chr16:22323869-22323591 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
45, 32
               

               
Conread position:
               
122-347
               

               
Cow position:
               
chr16:15023680-15023460 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
143, 10
               

               
Conread position:
               
122-379
               

               
Cow position:
               
chr16:11916262-11916007 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
82, 11
               

               
Conread position:
               
123-289
               

               
Cow position:
               
chr16:8438701-8438538 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
123-361
               

               
Cow position:
               
chr16:6609557-6609326 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
13, 79
               

               
Conread position:
               
123-382
               

               
Cow position:
               
chr16:30174577-30174318 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
162, 30
               

               
Conread position:
               
124-294
               

               
Cow position:
               
chr16:13414715-13414547 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
7, 31
               

               
Conread position:
               
124-361
               

               
Cow position:
               
chr16:30290259-30290494 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
149, 72
               

               
Conread position:
               
125-307
               

               
Cow position:
               
chr16:46430198-46430021 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
19, 67
               

               
Conread position:
               
125-382
               

               
Cow position:
               
chr16:11957629-11957374 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
8.00001e-42
               

               
Alignm gaps (pig, cow):
               
19, 69
               

               
Conread position:
               
125-412
               

               
Cow position:
               
chr16:31149329-31149612 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
19, 78
               

               
Conread position:
               
126-308
               

               
Cow position:
               
chr16:7549921-7550099 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
65, 0
               

               
Conread position:
               
126-309
               

               
Cow position:
               
chr16:42340150-42340330 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
126-352
               

               
Cow position:
               
chr16:37452661-37452440 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
208, 64
               

               
Conread position:
               
126-359
               

               
Cow position:
               
chr16:39683147-39682918 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
126-361
               

               
Cow position:
               
chr16:12688154-12687934 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
25, 64
               

               
Conread position:
               
126-361
               

               
Cow position:
               
chr16:22772932-22773156 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
64, 0
               

               
Conread position:
               
126-377
               

               
Cow position:
               
chr16:14242325-14242571 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
236, 27
               

               
Conread position:
               
126-377
               

               
Cow position:
               
chr16:43308607-43308362 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
129, 55
               

               
Conread position:
               
126-379
               

               
Cow position:
               
chr16:8323028-8322791 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
235, 27
               

               
Conread position:
               
126-382
               

               
Cow position:
               
chr16:15960337-15960078 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
159, 73
               

               
Conread position:
               
126-385
               

               
Cow position:
               
chr16:38244670-38244407 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
66, 22
               

               
Conread position:
               
126-387
               

               
Cow position:
               
chr16:18354002-18353741 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
160, 27
               

               
Conread position:
               
126-387
               

               
Cow position:
               
chr16:38243707-38243452 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
126-387
               

               
Cow position:
               
chr16:44428834-44429091 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
16, 66
               

               
Conread position:
               
126-409
               

               
Cow position:
               
chr16:8711244-8710961 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
28, 215
               

               
Conread position:
               
126-415
               

               
Cow position:
               
chr16:7582666-7582954 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
20, 74
               

               
Conread position:
               
126-432
               

               
Cow position:
               
chr16:16236177-16235875 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
63, 27
               

               
Conread position:
               
127-356
               

               
Cow position:
               
chr16:50289106-50289329 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
64, 0
               

               
Conread position:
               
127-390
               

               
Cow position:
               
chr16:8953737-8953458 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
57, 95
               

               
Conread position:
               
127-398
               

               
Cow position:
               
chr16:22842103-22841827 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
8.00001e-42
               

               
Alignm gaps (pig, cow):
               
11, 18
               

               
Conread position:
               
128-312
               

               
Cow position:
               
chr16:42633786-42633607 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
15, 25
               

               
Conread position:
               
128-326
               

               
Cow position:
               
chr16:6213557-6213745 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
128-431
               

               
Cow position:
               
chr16:13712978-13712686 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
226, 71
               

               
Conread position:
               
129-289
               

               
Cow position:
               
chr16:24826029-24826187 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
69, 0
               

               
Conread position:
               
129-297
               

               
Cow position:
               
chr16:5256950-5257118 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
23, 63
               

               
Conread position:
               
129-314
               

               
Cow position:
               
chr16:49169427-49169242 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
23, 72
               

               
Conread position:
               
129-318
               

               
Cow position:
               
chr16:48493136-48493323 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
157, 70
               

               
Conread position:
               
129-333
               

               
Cow position:
               
chr16:48086912-48086718 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
129-335
               

               
Cow position:
               
chr16:22327464-22327676 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
51, 27
               

               
Conread position:
               
129-360
               

               
Cow position:
               
chr16:3614703-3614919 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
158, 47
               

               
Conread position:
               
129-361
               

               
Cow position:
               
chr16:31561709-31561937 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
15, 75
               

               
Conread position:
               
129-378
               

               
Cow position:
               
chr16:7075871-7076119 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
160, 60
               

               
Conread position:
               
129-382
               

               
Cow position:
               
chr16:49229809-49229571 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
129-385
               

               
Cow position:
               
chr16:55233641-55233885 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
129-390
               

               
Cow position:
               
chr16:45121990-45122253 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
8.00001e-42
               

               
Alignm gaps (pig, cow):
               
13, 27
               

               
Conread position:
               
129-417
               

               
Cow position:
               
chr16:8522429-8522157 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
43, 26
               

               
Conread position:
               
130-261
               

               
Cow position:
               
chr16:39646502-39646630 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
132
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
130-286
               

               
Cow position:
               
chr16:12501203-12501050 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
130-294
               

               
Cow position:
               
chr16:54226641-54226481 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
21, 70
               

               
Conread position:
               
130-322
               

               
Cow position:
               
chr16:5726889-5727078 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
22, 71
               

               
Conread position:
               
130-331
               

               
Cow position:
               
chr16:13969414-13969207 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
63, 51
               

               
Conread position:
               
130-333
               

               
Cow position:
               
chr16:42752810-42753000 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
35, 0
               

               
Conread position:
               
130-349
               

               
Cow position:
               
chr16:7619220-7619003 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
166, 61
               

               
Conread position:
               
130-358
               

               
Cow position:
               
chr16:15762201-15761971 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
12, 24
               

               
Conread position:
               
130-361
               

               
Cow position:
               
chr16:11866346-11866114 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
36, 17
               

               
Conread position:
               
130-361
               

               
Cow position:
               
chr16:29037876-29038100 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
8.00001e-42
               

               
Alignm gaps (pig, cow):
               
69, 0
               

               
Conread position:
               
130-375
               

               
Cow position:
               
chr16:54664843-54664603 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
113, 64
               

               
Conread position:
               
130-378
               

               
Cow position:
               
chr16:7456500-7456255 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
160, 23
               

               
Conread position:
               
130-378
               

               
Cow position:
               
chr16:15953865-15953615 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
22, 143
               

               
Conread position:
               
130-378
               

               
Cow position:
               
chr16:39165199-39165437 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
233, 14
               

               
Conread position:
               
130-379
               

               
Cow position:
               
chr16:34754003-34753753 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
163, 72
               

               
Conread position:
               
130-381
               

               
Cow position:
               
chr16:4192467-4192230 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
130-386
               

               
Cow position:
               
chr16:820207-820463 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
140, 60
               

               
Conread position:
               
130-387
               

               
Cow position:
               
chr16:7665594-7665853 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
231, 75
               

               
Conread position:
               
130-387
               

               
Cow position:
               
chr16:14733475-14733215 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
36, 23
               

               
Conread position:
               
130-387
               

               
Cow position:
               
chr16:45139629-45139872 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
237, 28
               

               
Conread position:
               
130-387
               

               
Cow position:
               
chr16:55683259-55683511 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
233, 23
               

               
Conread position:
               
130-393
               

               
Cow position:
               
chr16:13689622-13689878 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
13, 26
               

               
Conread position:
               
130-393
               

               
Cow position:
               
chr16:40446218-40446489 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
21, 62
               

               
Conread position:
               
130-400
               

               
Cow position:
               
chr16:11177706-11177974 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
60, 23
               

               
Conread position:
               
130-400
               

               
Cow position:
               
chr16:45677935-45678199 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
214, 66
               

               
Conread position:
               
130-409
               

               
Cow position:
               
chr16:48385443-48385186 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
21, 70
               

               
Conread position:
               
132-368
               

               
Cow position:
               
chr16:14568528-14568302 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
133-289
               

               
Cow position:
               
chr16:17288906-17289061 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
15, 56
               

               
Conread position:
               
133-289
               

               
Cow position:
               
chr16:45299966-45299814 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
121, 19
               

               
Conread position:
               
133-297
               

               
Cow position:
               
chr16:40562192-40562353 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
62, 0
               

               
Conread position:
               
133-345
               

               
Cow position:
               
chr16:11615286-11615076 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
21, 58
               

               
Conread position:
               
133-353
               

               
Cow position:
               
chr16:33267675-33267896 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
137, 48
               

               
Conread position:
               
133-359
               

               
Cow position:
               
chr16:2417630-2417405 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
9, 58
               

               
Conread position:
               
133-361
               

               
Cow position:
               
chr16:12010053-12010281 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
11, 59
               

               
Conread position:
               
133-361
               

               
Cow position:
               
chr16:21381604-21381389 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
133-361
               

               
Cow position:
               
chr16:31565784-31565558 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
30, 25
               

               
Conread position:
               
133-384
               

               
Cow position:
               
chr16:12542944-12543197 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
59, 20
               

               
Conread position:
               
133-385
               

               
Cow position:
               
chr16:33704768-33705009 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
234, 38
               

               
Conread position:
               
133-386
               

               
Cow position:
               
chr16:42398937-42398676 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
60, 20
               

               
Conread position:
               
133-387
               

               
Cow position:
               
chr16:14841318-14841578 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
15, 26
               

               
Conread position:
               
133-389
               

               
Cow position:
               
chr16:33198477-33198218 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
160, 79
               

               
Conread position:
               
133-391
               

               
Cow position:
               
chr16:56595428-56595174 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
16, 45
               

               
Conread position:
               
133-392
               

               
Cow position:
               
chr16:35758163-35758417 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
143, 21
               

               
Conread position:
               
133-394
               

               
Cow position:
               
chr16:13996238-13995977 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
16, 48
               

               
Conread position:
               
133-411
               

               
Cow position:
               
chr16:50409203-50409486 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
19, 122
               

               
Conread position:
               
133-422
               

               
Cow position:
               
chr16:11135020-11134739 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
240, 25
               

               
Conread position:
               
134-297
               

               
Cow position:
               
chr16:35188215-35188371 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
134-308
               

               
Cow position:
               
chr16:17626891-17627064 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
103, 19
               

               
Conread position:
               
134-308
               

               
Cow position:
               
chr16:47345968-47346139 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
134-312
               

               
Cow position:
               
chr16:20025407-20025577 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
134-359
               

               
Cow position:
               
chr16:24617031-24617253 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
59, 54
               

               
Conread position:
               
134-374
               

               
Cow position:
               
chr16:42444118-42444355 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
159, 19
               

               
Conread position:
               
134-379
               

               
Cow position:
               
chr16:27723186-27723411 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
134-379
               

               
Cow position:
               
chr16:36286722-36286481 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
17, 64
               

               
Conread position:
               
134-382
               

               
Cow position:
               
chr16:19052595-19052836 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
17, 49
               

               
Conread position:
               
134-383
               

               
Cow position:
               
chr16:8231392-8231159 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
62, 0
               

               
Conread position:
               
134-383
               

               
Cow position:
               
chr16:15407595-15407350 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
142, 19
               

               
Conread position:
               
134-383
               

               
Cow position:
               
chr16:46655245-46655487 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
147, 65
               

               
Conread position:
               
134-387
               

               
Cow position:
               
chr16:23058475-23058222 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
147, 60
               

               
Conread position:
               
134-388
               

               
Cow position:
               
chr16:31117653-31117409 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
47, 0
               

               
Conread position:
               
134-400
               

               
Cow position:
               
chr16:42242155-42241897 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
226, 19
               

               
Conread position:
               
134-404
               

               
Cow position:
               
chr16:47820529-47820798 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
151, 55
               

               
Conread position:
               
134-404
               

               
Cow position:
               
chr16:49860194-49860457 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
63, 19
               

               
Conread position:
               
134-405
               

               
Cow position:
               
chr16:7626120-7626378 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
56, 0
               

               
Conread position:
               
134-413
               

               
Cow position:
               
chr16:30935818-30936093 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
17, 66
               

               
Conread position:
               
134-420
               

               
Cow position:
               
chr16:34998660-34998381 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
145, 55
               

               
Conread position:
               
134-421
               

               
Cow position:
               
chr16:38663749-38663466 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
269, 65
               

               
Conread position:
               
135-333
               

               
Cow position:
               
chr16:45609950-45610143 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
139, 18
               

               
Conread position:
               
135-359
               

               
Cow position:
               
chr16:46752311-46752089 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
16, 63
               

               
Conread position:
               
135-379
               

               
Cow position:
               
chr16:54579131-54579370 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
228, 14
               

               
Conread position:
               
135-386
               

               
Cow position:
               
chr16:4857136-4856892 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
135-389
               

               
Cow position:
               
chr16:26649668-26649418 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
8, 56
               

               
Conread position:
               
135-390
               

               
Cow position:
               
chr16:12077516-12077270 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
156, 18
               

               
Conread position:
               
135-391
               

               
Cow position:
               
chr16:51500896-51501140 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
135-397
               

               
Cow position:
               
chr16:8065926-8065663 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
227, 67
               

               
Conread position:
               
135-404
               

               
Cow position:
               
chr16:8017928-8018180 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
16, 60
               

               
Conread position:
               
135-407
               

               
Cow position:
               
chr16:45813733-45813470 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
6, 20
               

               
Conread position:
               
136-297
               

               
Cow position:
               
chr16:25380532-25380373 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
136-307
               

               
Cow position:
               
chr16:50667253-50667424 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
15, 55
               

               
Conread position:
               
136-310
               

               
Cow position:
               
chr16:48340731-48340560 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
54, 0
               

               
Conread position:
               
136-332
               

               
Cow position:
               
chr16:7702490-7702678 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
15, 33
               

               
Conread position:
               
136-356
               

               
Cow position:
               
chr16:1220215-1220000 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
5, 20
               

               
Conread position:
               
136-374
               

               
Cow position:
               
chr16:48095804-48095574 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
10, 54
               

               
Conread position:
               
136-386
               

               
Cow position:
               
chr16:8959094-8958851 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
136-389
               

               
Cow position:
               
chr16:20824440-20824692 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
227, 54
               

               
Conread position:
               
136-390
               

               
Cow position:
               
chr16:9905054-9905308 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
129, 22
               

               
Conread position:
               
136-397
               

               
Cow position:
               
chr16:8494029-8493768 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
50, 17
               

               
Conread position:
               
136-399
               

               
Cow position:
               
chr16:42734048-42733793 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
219, 60
               

               
Conread position:
               
136-412
               

               
Cow position:
               
chr16:29527793-29528076 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
175, 17
               

               
Conread position:
               
137-293
               

               
Cow position:
               
chr16:24403464-24403312 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
58, 0
               

               
Conread position:
               
137-344
               

               
Cow position:
               
chr16:17982174-17981982 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
18, 49
               

               
Conread position:
               
137-377
               

               
Cow position:
               
chr16:8673644-8673407 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
56, 16
               

               
Conread position:
               
137-378
               

               
Cow position:
               
chr16:51697045-51697274 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
11, 53
               

               
Conread position:
               
137-383
               

               
Cow position:
               
chr16:34257071-34256829 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
145, 7
               

               
Conread position:
               
137-383
               

               
Cow position:
               
chr16:42433147-42432908 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
225, 53
               

               
Conread position:
               
137-386
               

               
Cow position:
               
chr16:8738029-8738274 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
168, 52
               

               
Conread position:
               
137-388
               

               
Cow position:
               
chr16:50442510-50442761 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
14, 61
               

               
Conread position:
               
137-389
               

               
Cow position:
               
chr16:41590741-41590982 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
134, 61
               

               
Conread position:
               
138-275
               

               
Cow position:
               
chr16:27261981-27261851 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
138-297
               

               
Cow position:
               
chr16:21317628-21317471 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
49, 0
               

               
Conread position:
               
138-297
               

               
Cow position:
               
chr16:30037020-30036870 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
138-297
               

               
Cow position:
               
chr16:44683701-44683536 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
58, 15
               

               
Conread position:
               
138-387
               

               
Cow position:
               
chr16:36121019-36120789 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
10, 62
               

               
Conread position:
               
138-387
               

               
Cow position:
               
chr16:46548301-46548055 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
161, 11
               

               
Conread position:
               
138-402
               

               
Cow position:
               
chr16:19756825-19756559 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
53, 15
               

               
Conread position:
               
139-264
               

               
Cow position:
               
chr16:32327624-32327747 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
126
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
63, 0
               

               
Conread position:
               
139-284
               

               
Cow position:
               
chr16:5725433-5725577 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
139, 57
               

               
Conread position:
               
139-293
               

               
Cow position:
               
chr16:44713514-44713362 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
131, 55
               

               
Conread position:
               
139-307
               

               
Cow position:
               
chr16:12633849-12634016 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
12, 61
               

               
Conread position:
               
139-323
               

               
Cow position:
               
chr16:45456923-45457112 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
48, 15
               

               
Conread position:
               
139-333
               

               
Cow position:
               
chr16:33482407-33482604 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
8, 15
               

               
Conread position:
               
139-349
               

               
Cow position:
               
chr16:41578193-41578397 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
29, 0
               

               
Conread position:
               
139-350
               

               
Cow position:
               
chr16:33405528-33405317 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
160, 60
               

               
Conread position:
               
139-355
               

               
Cow position:
               
chr16:3246238-3246029 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
115, 14
               

               
Conread position:
               
139-361
               

               
Cow position:
               
chr16:34223418-34223635 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
143, 14
               

               
Conread position:
               
139-361
               

               
Cow position:
               
chr16:39516631-39516413 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
91, 14
               

               
Conread position:
               
139-361
               

               
Cow position:
               
chr16:56850305-56850531 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
12, 136
               

               
Conread position:
               
139-371
               

               
Cow position:
               
chr16:4910559-4910329 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
228, 49
               

               
Conread position:
               
139-375
               

               
Cow position:
               
chr16:30939913-30940130 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
27, 15
               

               
Conread position:
               
139-377
               

               
Cow position:
               
chr16:25839586-25839814 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
222, 59
               

               
Conread position:
               
139-382
               

               
Cow position:
               
chr16:9933128-9933368 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
224, 14
               

               
Conread position:
               
139-386
               

               
Cow position:
               
chr16:15905284-15905036 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
147, 57
               

               
Conread position:
               
139-386
               

               
Cow position:
               
chr16:45554407-45554642 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
234, 156
               

               
Conread position:
               
139-387
               

               
Cow position:
               
chr16:18256220-18255968 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
93, 14
               

               
Conread position:
               
139-387
               

               
Cow position:
               
chr16:48398288-48398049 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
51, 0
               

               
Conread position:
               
139-390
               

               
Cow position:
               
chr16:53509017-53508781 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
139-391
               

               
Cow position:
               
chr16:22738247-22738490 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
204, 14
               

               
Conread position:
               
139-412
               

               
Cow position:
               
chr16:44394231-44394523 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
60, 241
               

               
Conread position:
               
140-290
               

               
Cow position:
               
chr16:26372981-26372836 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
140-307
               

               
Cow position:
               
chr16:45785704-45785869 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
58, 0
               

               
Conread position:
               
140-348
               

               
Cow position:
               
chr16:45461071-45460866 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
140-359
               

               
Cow position:
               
chr16:12523023-12523239 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
114, 59
               

               
Conread position:
               
140-361
               

               
Cow position:
               
chr16:10039875-10039661 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
134, 9
               

               
Conread position:
               
140-361
               

               
Cow position:
               
chr16:12379386-12379159 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
12, 60
               

               
Conread position:
               
140-361
               

               
Cow position:
               
chr16:32302038-32301819 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
76, 12
               

               
Conread position:
               
140-361
               

               
Cow position:
               
chr16:56875694-56875463 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
135, 9
               

               
Conread position:
               
140-362
               

               
Cow position:
               
chr16:47301845-47302063 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
11, 56
               

               
Conread position:
               
140-377
               

               
Cow position:
               
chr16:238235-238464 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
59, 0
               

               
Conread position:
               
140-377
               

               
Cow position:
               
chr16:56665542-56665764 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
139, 56
               

               
Conread position:
               
140-378
               

               
Cow position:
               
chr16:9578525-9578289 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
14, 53
               

               
Conread position:
               
140-383
               

               
Cow position:
               
chr16:4852150-4851911 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
43, 13
               

               
Conread position:
               
140-383
               

               
Cow position:
               
chr16:9161049-9161278 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
7, 60
               

               
Conread position:
               
140-387
               

               
Cow position:
               
chr16:18243709-18243944 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
46, 0
               

               
Conread position:
               
140-387
               

               
Cow position:
               
chr16:22984724-22984958 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
140-387
               

               
Cow position:
               
chr16:32142058-32142301 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
232, 13
               

               
Conread position:
               
140-388
               

               
Cow position:
               
chr16:21370220-21369976 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
123, 50
               

               
Conread position:
               
140-389
               

               
Cow position:
               
chr16:51610869-51610614 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
11, 58
               

               
Conread position:
               
140-390
               

               
Cow position:
               
chr16:30186611-30186854 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
11, 60
               

               
Conread position:
               
140-402
               

               
Cow position:
               
chr16:17745803-17746071 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
145, 59
               

               
Conread position:
               
140-403
               

               
Cow position:
               
chr16:7583365-7583621 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
140-417
               

               
Cow position:
               
chr16:10032606-10032879 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
215, 56
               

               
Conread position:
               
141-286
               

               
Cow position:
               
chr16:10148251-10148393 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
141-293
               

               
Cow position:
               
chr16:53086371-53086223 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
22, 46
               

               
Conread position:
               
141-307
               

               
Cow position:
               
chr16:35297038-35297210 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
54, 12
               

               
Conread position:
               
141-361
               

               
Cow position:
               
chr16:7812660-7812876 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
141-361
               

               
Cow position:
               
chr16:20871991-20872194 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
141-361
               

               
Cow position:
               
chr16:48917441-48917658 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
5, 13
               

               
Conread position:
               
141-374
               

               
Cow position:
               
chr16:14106609-14106839 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
10, 47
               

               
Conread position:
               
141-374
               

               
Cow position:
               
chr16:43275989-43276225 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
5, 33
               

               
Conread position:
               
141-378
               

               
Cow position:
               
chr16:23681335-23681565 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
96, 59
               

               
Conread position:
               
141-378
               

               
Cow position:
               
chr16:49336196-49336424 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
221, 58
               

               
Conread position:
               
141-379
               

               
Cow position:
               
chr16:48145432-48145206 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
11, 34
               

               
Conread position:
               
141-380
               

               
Cow position:
               
chr16:15945287-15945046 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
132, 12
               

               
Conread position:
               
141-382
               

               
Cow position:
               
chr16:23955863-23955623 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
145, 12
               

               
Conread position:
               
141-383
               

               
Cow position:
               
chr16:8193422-8193661 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
81, 12
               

               
Conread position:
               
141-384
               

               
Cow position:
               
chr16:19047465-19047223 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
220, 12
               

               
Conread position:
               
141-385
               

               
Cow position:
               
chr16:11359120-11359352 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
8.99634e-43
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
141-387
               

               
Cow position:
               
chr16:5896391-5896628 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
202, 14
               

               
Conread position:
               
141-387
               

               
Cow position:
               
chr16:8448681-8448453 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
6, 41
               

               
Conread position:
               
141-387
               

               
Cow position:
               
chr16:20614448-20614704 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
58, 12
               

               
Conread position:
               
141-387
               

               
Cow position:
               
chr16:55784788-55784533 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
48, 12
               

               
Conread position:
               
141-388
               

               
Cow position:
               
chr16:9985425-9985188 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
141-389
               

               
Cow position:
               
chr16:31558872-31559119 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
13, 59
               

               
Conread position:
               
141-407
               

               
Cow position:
               
chr16:13698483-13698748 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
52, 44
               

               
Conread position:
               
141-442
               

               
Cow position:
               
chr16:51795635-51795338 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
258, 55
               

               
Conread position:
               
142-277
               

               
Cow position:
               
chr16:52889442-52889310 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
9, 48
               

               
Conread position:
               
142-310
               

               
Cow position:
               
chr16:6310731-6310566 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
53, 11
               

               
Conread position:
               
142-312
               

               
Cow position:
               
chr16:5363869-5364038 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
50, 0
               

               
Conread position:
               
142-360
               

               
Cow position:
               
chr16:9729164-9729380 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
54, 0
               

               
Conread position:
               
142-361
               

               
Cow position:
               
chr16:26030915-26030693 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
116, 57
               

               
Conread position:
               
142-361
               

               
Cow position:
               
chr16:26676715-26676506 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
142-382
               

               
Cow position:
               
chr16:2750949-2751182 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
5, 58
               

               
Conread position:
               
142-387
               

               
Cow position:
               
chr16:29712389-29712624 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
29, 0
               

               
Conread position:
               
142-387
               

               
Cow position:
               
chr16:30662299-30662061 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
136, 12
               

               
Conread position:
               
142-387
               

               
Cow position:
               
chr16:47242924-47243172 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
50, 107
               

               
Conread position:
               
142-395
               

               
Cow position:
               
chr16:23719012-23718756 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
41, 131
               

               
Conread position:
               
143-297
               

               
Cow position:
               
chr16:14758709-14758861 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
135, 10
               

               
Conread position:
               
143-297
               

               
Cow position:
               
chr16:47854911-47855060 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
102, 25
               

               
Conread position:
               
143-355
               

               
Cow position:
               
chr16:13578891-13578678 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
94, 53
               

               
Conread position:
               
143-359
               

               
Cow position:
               
chr16:8840858-8841078 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
15, 124
               

               
Conread position:
               
143-361
               

               
Cow position:
               
chr16:18953554-18953765 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
115, 56
               

               
Conread position:
               
143-361
               

               
Cow position:
               
chr16:32893598-32893802 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
50, 0
               

               
Conread position:
               
143-361
               

               
Cow position:
               
chr16:42200869-42201088 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
125, 56
               

               
Conread position:
               
143-375
               

               
Cow position:
               
chr16:20205432-20205660 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
10, 0
               

               
Conread position:
               
143-380
               

               
Cow position:
               
chr16:51598641-51598409 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
186, 10
               

               
Conread position:
               
143-409
               

               
Cow position:
               
chr16:12320191-12320458 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
117, 46
               

               
Conread position:
               
144-286
               

               
Cow position:
               
chr16:27160892-27160753 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
144-293
               

               
Cow position:
               
chr16:30027845-30027991 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
20, 9
               

               
Conread position:
               
144-294
               

               
Cow position:
               
chr16:8076530-8076383 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
107, 9
               

               
Conread position:
               
144-308
               

               
Cow position:
               
chr16:33530381-33530542 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
144-355
               

               
Cow position:
               
chr16:11389601-11389393 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
129, 9
               

               
Conread position:
               
144-357
               

               
Cow position:
               
chr16:45108820-45109029 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
54, 0
               

               
Conread position:
               
144-359
               

               
Cow position:
               
chr16:45348354-45348571 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
49, 15
               

               
Conread position:
               
144-361
               

               
Cow position:
               
chr16:17283418-17283623 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
76, 9
               

               
Conread position:
               
144-361
               

               
Cow position:
               
chr16:31241319-31241109 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
44, 0
               

               
Conread position:
               
144-361
               

               
Cow position:
               
chr16:33236313-33236100 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
49, 9
               

               
Conread position:
               
144-361
               

               
Cow position:
               
chr16:42539618-42539399 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
7, 56
               

               
Conread position:
               
144-378
               

               
Cow position:
               
chr16:956923-956686 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
45, 10
               

               
Conread position:
               
144-378
               

               
Cow position:
               
chr16:13306900-13306671 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
144-378
               

               
Cow position:
               
chr16:28444518-28444283 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
216, 9
               

               
Conread position:
               
144-378
               

               
Cow position:
               
chr16:42977437-42977678 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
157, 9
               

               
Conread position:
               
144-382
               

               
Cow position:
               
chr16:21450818-21451058 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
217, 52
               

               
Conread position:
               
144-382
               

               
Cow position:
               
chr16:47632834-47633078 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
147, 44
               

               
Conread position:
               
144-383
               

               
Cow position:
               
chr16:13611481-13611234 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
145, 9
               

               
Conread position:
               
144-383
               

               
Cow position:
               
chr16:16552532-16552773 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
19, 14
               

               
Conread position:
               
144-385
               

               
Cow position:
               
chr16:53428229-53428459 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
10, 0
               

               
Conread position:
               
144-386
               

               
Cow position:
               
chr16:19670382-19670151 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
58, 0
               

               
Conread position:
               
144-387
               

               
Cow position:
               
chr16:9560523-9560278 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
93, 9
               

               
Conread position:
               
144-387
               

               
Cow position:
               
chr16:18048183-18047943 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
93, 9
               

               
Conread position:
               
144-403
               

               
Cow position:
               
chr16:9730235-9729977 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
223, 46
               

               
Conread position:
               
144-404
               

               
Cow position:
               
chr16:25484311-25484549 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
206, 9
               

               
Conread position:
               
144-404
               

               
Cow position:
               
chr16:38905262-38904995 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
110, 9
               

               
Conread position:
               
144-410
               

               
Cow position:
               
chr16:41530328-41530070 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
218, 9
               

               
Conread position:
               
144-418
               

               
Cow position:
               
chr16:44744162-44743892 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
129, 52
               

               
Conread position:
               
144-423
               

               
Cow position:
               
chr16:591839-591557 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
109, 9
               

               
Conread position:
               
145-297
               

               
Cow position:
               
chr16:15254780-15254635 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
8, 0
               

               
Conread position:
               
145-297
               

               
Cow position:
               
chr16:30359090-30358941 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
8, 0
               

               
Conread position:
               
145-312
               

               
Cow position:
               
chr16:9500494-9500661 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
136, 52
               

               
Conread position:
               
145-348
               

               
Cow position:
               
chr16:51112905-51112711 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
8, 0
               

               
Conread position:
               
145-351
               

               
Cow position:
               
chr16:38607097-38606894 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
51, 0
               

               
Conread position:
               
145-359
               

               
Cow position:
               
chr16:4970857-4971067 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
20, 13
               

               
Conread position:
               
145-361
               

               
Cow position:
               
chr16:12108415-12108188 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
145-361
               

               
Cow position:
               
chr16:12939591-12939800 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
31, 16
               

               
Conread position:
               
145-361
               

               
Cow position:
               
chr16:14685421-14685208 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
99, 54
               

               
Conread position:
               
145-361
               

               
Cow position:
               
chr16:33645987-33646198 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
145-377
               

               
Cow position:
               
chr16:14754355-14754130 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
57, 156
               

               
Conread position:
               
145-378
               

               
Cow position:
               
chr16:11390313-11390075 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
32, 8
               

               
Conread position:
               
145-379
               

               
Cow position:
               
chr16:51043629-51043847 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
222, 49
               

               
Conread position:
               
145-383
               

               
Cow position:
               
chr16:11082970-11083200 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
52, 0
               

               
Conread position:
               
145-384
               

               
Cow position:
               
chr16:45700512-45700274 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
87, 8
               

               
Conread position:
               
145-386
               

               
Cow position:
               
chr16:13295569-13295812 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
48, 9
               

               
Conread position:
               
145-389
               

               
Cow position:
               
chr16:6343943-6343696 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
41, 102
               

               
Conread position:
               
145-394
               

               
Cow position:
               
chr16:56796695-56796438 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
6, 45
               

               
Conread position:
               
145-408
               

               
Cow position:
               
chr16:18205933-18206184 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
227, 8
               

               
Conread position:
               
145-415
               

               
Cow position:
               
chr16:49216020-49215772 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
267, 54
               

               
Conread position:
               
146-292
               

               
Cow position:
               
chr16:4399708-4399852 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
50, 0
               

               
Conread position:
               
146-294
               

               
Cow position:
               
chr16:40745386-40745240 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
53, 0
               

               
Conread position:
               
146-361
               

               
Cow position:
               
chr16:16232027-16232242 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
83, 50
               

               
Conread position:
               
146-374
               

               
Cow position:
               
chr16:29766306-29766515 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
104, 27
               

               
Conread position:
               
146-378
               

               
Cow position:
               
chr16:29159097-29159312 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
47, 0
               

               
Conread position:
               
146-385
               

               
Cow position:
               
chr16:23564107-23564349 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
147, 35
               

               
Conread position:
               
146-387
               

               
Cow position:
               
chr16:258305-258076 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
146-413
               

               
Cow position:
               
chr16:7136371-7136111 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
249, 8
               

               
Conread position:
               
147-378
               

               
Cow position:
               
chr16:50906445-50906677 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
24, 6
               

               
Conread position:
               
147-387
               

               
Cow position:
               
chr16:15370658-15370892 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
46, 41
               

               
Conread position:
               
149-377
               

               
Cow position:
               
chr16:45044795-45045016 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
136, 28
               

               
Conread position:
               
149-378
               

               
Cow position:
               
chr16:45046812-45047047 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
17, 59
               

               
Conread position:
               
149-381
               

               
Cow position:
               
chr16:56565571-56565795 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
116, 59
               

               
Conread position:
               
149-383
               

               
Cow position:
               
chr16:11584428-11584202 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
224, 23
               

               
Conread position:
               
149-402
               

               
Cow position:
               
chr16:50282457-50282206 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
67, 50
               

               
Conread position:
               
149-409
               

               
Cow position:
               
chr16:48580894-48581156 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
29, 121
               

               
Conread position:
               
150-289
               

               
Cow position:
               
chr16:39202117-39202253 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
115, 14
               

               
Conread position:
               
150-289
               

               
Cow position:
               
chr16:43674850-43674988 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
23, 40
               

               
Conread position:
               
150-297
               

               
Cow position:
               
chr16:8933448-8933306 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
150-297
               

               
Cow position:
               
chr16:11390880-11391027 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
31, 43
               

               
Conread position:
               
150-308
               

               
Cow position:
               
chr16:22329138-22329294 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
16, 23
               

               
Conread position:
               
150-308
               

               
Cow position:
               
chr16:48545798-48545954 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
40, 0
               

               
Conread position:
               
150-312
               

               
Cow position:
               
chr16:10945461-10945304 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
150-313
               

               
Cow position:
               
chr16:20633899-20633739 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
82, 17
               

               
Conread position:
               
150-346
               

               
Cow position:
               
chr16:31348787-31348589 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
133, 49
               

               
Conread position:
               
150-355
               

               
Cow position:
               
chr16:46807563-46807361 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
46, 0
               

               
Conread position:
               
150-359
               

               
Cow position:
               
chr16:28655681-28655475 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
132, 46
               

               
Conread position:
               
150-359
               

               
Cow position:
               
chr16:40377838-40377631 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
46, 0
               

               
Conread position:
               
150-361
               

               
Cow position:
               
chr16:22318974-22318768 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
46, 0
               

               
Conread position:
               
150-377
               

               
Cow position:
               
chr16:47852616-47852395 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
211, 44
               

               
Conread position:
               
150-378
               

               
Cow position:
               
chr16:55965160-55965385 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
139, 49
               

               
Conread position:
               
150-383
               

               
Cow position:
               
chr16:12324432-12324659 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
223, 42
               

               
Conread position:
               
150-383
               

               
Cow position:
               
chr16:17135704-17135941 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
153, 49
               

               
Conread position:
               
150-385
               

               
Cow position:
               
chr16:21002408-21002167 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
39, 127
               

               
Conread position:
               
150-387
               

               
Cow position:
               
chr16:33595960-33595740 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
40, 0
               

               
Conread position:
               
150-388
               

               
Cow position:
               
chr16:23823050-23822821 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
46, 0
               

               
Conread position:
               
150-389
               

               
Cow position:
               
chr16:17142911-17143153 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
137, 37
               

               
Conread position:
               
150-399
               

               
Cow position:
               
chr16:19643865-19644107 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
59, 40
               

               
Conread position:
               
150-400
               

               
Cow position:
               
chr16:56082388-56082140 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
222, 46
               

               
Conread position:
               
150-404
               

               
Cow position:
               
chr16:11775075-11774825 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
75, 44
               

               
Conread position:
               
150-408
               

               
Cow position:
               
chr16:45943797-45943539 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
52, 195
               

               
Conread position:
               
150-409
               

               
Cow position:
               
chr16:52357562-52357305 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
217, 46
               

               
Conread position:
               
150-410
               

               
Cow position:
               
chr16:2223420-2223165 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
49, 0
               

               
Conread position:
               
150-452
               

               
Cow position:
               
chr16:4972050-4971746 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
111, 52
               

               
Conread position:
               
151-381
               

               
Cow position:
               
chr16:44138514-44138284 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
54, 61
               

               
Conread position:
               
151-407
               

               
Cow position:
               
chr16:45233337-45233584 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
17, 9
               

               
Conread position:
               
152-358
               

               
Cow position:
               
chr16:56821579-56821788 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
40, 121
               

               
Conread position:
               
152-389
               

               
Cow position:
               
chr16:50286491-50286727 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
5, 43
               

               
Conread position:
               
152-420
               

               
Cow position:
               
chr16:8025876-8025627 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
220, 47
               

               
Conread position:
               
153-287
               

               
Cow position:
               
chr16:55592544-55592675 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
136
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
34, 47
               

               
Conread position:
               
153-292
               

               
Cow position:
               
chr16:43800936-43800802 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
153-294
               

               
Cow position:
               
chr16:6319182-6319322 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
41, 0
               

               
Conread position:
               
153-297
               

               
Cow position:
               
chr16:1415318-1415181 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
46, 0
               

               
Conread position:
               
153-297
               

               
Cow position:
               
chr16:4736604-4736465 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
41, 0
               

               
Conread position:
               
153-297
               

               
Cow position:
               
chr16:29677654-29677512 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
43, 0
               

               
Conread position:
               
153-307
               

               
Cow position:
               
chr16:52133537-52133386 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
153-312
               

               
Cow position:
               
chr16:12097621-12097778 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
153-341
               

               
Cow position:
               
chr16:43105535-43105339 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
140, 46
               

               
Conread position:
               
153-345
               

               
Cow position:
               
chr16:43185277-43185466 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
46, 0
               

               
Conread position:
               
153-359
               

               
Cow position:
               
chr16:9958809-9959010 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
129, 36
               

               
Conread position:
               
153-361
               

               
Cow position:
               
chr16:5415778-5415562 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
112, 44
               

               
Conread position:
               
153-361
               

               
Cow position:
               
chr16:6016400-6016201 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
43, 0
               

               
Conread position:
               
153-361
               

               
Cow position:
               
chr16:7442118-7441917 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
46, 0
               

               
Conread position:
               
153-375
               

               
Cow position:
               
chr16:7152191-7151971 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
202, 46
               

               
Conread position:
               
153-378
               

               
Cow position:
               
chr16:29655305-29655518 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
209, 50
               

               
Conread position:
               
153-381
               

               
Cow position:
               
chr16:29095907-29096124 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
209, 26
               

               
Conread position:
               
153-383
               

               
Cow position:
               
chr16:28396101-28395882 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
209, 46
               

               
Conread position:
               
153-383
               

               
Cow position:
               
chr16:50943360-50943592 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
39, 112
               

               
Conread position:
               
153-384
               

               
Cow position:
               
chr16:18757857-18757625 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
154, 28
               

               
Conread position:
               
153-387
               

               
Cow position:
               
chr16:8273858-8273607 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
146, 46
               

               
Conread position:
               
153-387
               

               
Cow position:
               
chr16:9830425-9830656 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
142, 46
               

               
Conread position:
               
153-387
               

               
Cow position:
               
chr16:35297386-35297617 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
41, 36
               

               
Conread position:
               
153-388
               

               
Cow position:
               
chr16:31575124-31575360 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
101, 46
               

               
Conread position:
               
153-388
               

               
Cow position:
               
chr16:56265482-56265713 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
217, 44
               

               
Conread position:
               
153-390
               

               
Cow position:
               
chr16:52275149-52274922 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
220, 46
               

               
Conread position:
               
153-398
               

               
Cow position:
               
chr16:29026188-29026437 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
150, 46
               

               
Conread position:
               
153-400
               

               
Cow position:
               
chr16:22380375-22380141 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
73, 37
               

               
Conread position:
               
153-407
               

               
Cow position:
               
chr16:29557650-29557393 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
110, 46
               

               
Conread position:
               
153-409
               

               
Cow position:
               
chr16:12360995-12360741 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
69, 51
               

               
Conread position:
               
153-412
               

               
Cow position:
               
chr16:12274050-12274310 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
205, 42
               

               
Conread position:
               
153-428
               

               
Cow position:
               
chr16:13696701-13696431 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
129, 24
               

               
Conread position:
               
153-428
               

               
Cow position:
               
chr16:49125548-49125270 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
84, 11
               

               
Conread position:
               
154-306
               

               
Cow position:
               
chr16:29886202-29886050 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
55, 39
               

               
Conread position:
               
154-361
               

               
Cow position:
               
chr16:15726377-15726169 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
131, 33
               

               
Conread position:
               
154-362
               

               
Cow position:
               
chr16:13252325-13252135 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
154-382
               

               
Cow position:
               
chr16:9596351-9596570 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
43, 0
               

               
Conread position:
               
154-382
               

               
Cow position:
               
chr16:48448704-48448949 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
135, 39
               

               
Conread position:
               
154-404
               

               
Cow position:
               
chr16:7496238-7496478 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
200, 17
               

               
Conread position:
               
154-408
               

               
Cow position:
               
chr16:52389601-52389867 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
131, 37
               

               
Conread position:
               
155-289
               

               
Cow position:
               
chr16:14974558-14974430 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
135
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
44, 0
               

               
Conread position:
               
155-298
               

               
Cow position:
               
chr16:8065668-8065524 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
65, 43
               

               
Conread position:
               
155-313
               

               
Cow position:
               
chr16:41689675-41689832 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
136, 36
               

               
Conread position:
               
155-359
               

               
Cow position:
               
chr16:42864756-42864554 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
9, 42
               

               
Conread position:
               
155-378
               

               
Cow position:
               
chr16:13483593-13483377 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
42, 0
               

               
Conread position:
               
155-385
               

               
Cow position:
               
chr16:11003583-11003354 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
127, 35
               

               
Conread position:
               
155-407
               

               
Cow position:
               
chr16:44210576-44210329 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
126, 32
               

               
Conread position:
               
155-420
               

               
Cow position:
               
chr16:23472731-23472981 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
51, 0
               

               
Conread position:
               
155-424
               

               
Cow position:
               
chr16:47304143-47303864 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
99, 44
               

               
Conread position:
               
156-303
               

               
Cow position:
               
chr16:22824851-22824706 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
81, 43
               

               
Conread position:
               
156-358
               

               
Cow position:
               
chr16:10523614-10523815 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
8, 41
               

               
Conread position:
               
156-398
               

               
Cow position:
               
chr16:43125970-43125728 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
20, 40
               

               
Conread position:
               
157-361
               

               
Cow position:
               
chr16:31573238-31573429 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
136, 42
               

               
Conread position:
               
157-377
               

               
Cow position:
               
chr16:32426746-32426522 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
22, 113
               

               
Conread position:
               
157-378
               

               
Cow position:
               
chr16:25170377-25170591 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
157-387
               

               
Cow position:
               
chr16:46433343-46433110 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
68, 33
               

               
Conread position:
               
157-387
               

               
Cow position:
               
chr16:56126800-56126567 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
88, 109
               

               
Conread position:
               
157-390
               

               
Cow position:
               
chr16:16597541-16597771 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
216, 33
               

               
Conread position:
               
157-403
               

               
Cow position:
               
chr16:20476519-20476756 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
98, 39
               

               
Conread position:
               
158-359
               

               
Cow position:
               
chr16:33299379-33299578 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
158-361
               

               
Cow position:
               
chr16:48567518-48567711 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
127, 40
               

               
Conread position:
               
158-371
               

               
Cow position:
               
chr16:22850313-22850521 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
5, 38
               

               
Conread position:
               
158-371
               

               
Cow position:
               
chr16:55945155-55944952 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
185, 32
               

               
Conread position:
               
158-382
               

               
Cow position:
               
chr16:52170040-52170257 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
215, 50
               

               
Conread position:
               
158-385
               

               
Cow position:
               
chr16:12220666-12220890 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
141, 41
               

               
Conread position:
               
158-387
               

               
Cow position:
               
chr16:5382163-5382399 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
46, 0
               

               
Conread position:
               
158-404
               

               
Cow position:
               
chr16:54734224-54734473 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
132, 29
               

               
Conread position:
               
159-400
               

               
Cow position:
               
chr16:50933897-50933669 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
78, 40
               

               
Conread position:
               
160-361
               

               
Cow position:
               
chr16:33632688-33632495 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
160-386
               

               
Cow position:
               
chr16:14376769-14376993 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
202, 36
               

               
Conread position:
               
160-395
               

               
Cow position:
               
chr16:24142972-24142736 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
6, 31
               

               
Conread position:
               
161-355
               

               
Cow position:
               
chr16:14386579-14386768 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
35, 0
               

               
Conread position:
               
161-359
               

               
Cow position:
               
chr16:33238709-33238515 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
112, 35
               

               
Conread position:
               
161-359
               

               
Cow position:
               
chr16:55613516-55613320 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
35, 0
               

               
Conread position:
               
161-361
               

               
Cow position:
               
chr16:9280129-9279921 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
137, 35
               

               
Conread position:
               
161-364
               

               
Cow position:
               
chr16:48613488-48613292 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
161-371
               

               
Cow position:
               
chr16:50395353-50395567 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
22, 114
               

               
Conread position:
               
161-378
               

               
Cow position:
               
chr16:32781354-32781571 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
153, 28
               

               
Conread position:
               
161-399
               

               
Cow position:
               
chr16:26843714-26843948 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
224, 35
               

               
Conread position:
               
161-407
               

               
Cow position:
               
chr16:18573066-18572828 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
35, 0
               

               
Conread position:
               
161-407
               

               
Cow position:
               
chr16:24895274-24895517 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
76, 35
               

               
Conread position:
               
161-432
               

               
Cow position:
               
chr16:56615518-56615245 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
21, 94
               

               
Conread position:
               
161-441
               

               
Cow position:
               
chr16:44147444-44147164 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
116, 35
               

               
Conread position:
               
162-386
               

               
Cow position:
               
chr16:42078858-42078641 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
162-389
               

               
Cow position:
               
chr16:31484673-31484455 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
200, 41
               

               
Conread position:
               
162-390
               

               
Cow position:
               
chr16:35074551-35074778 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
214, 37
               

               
Conread position:
               
163-312
               

               
Cow position:
               
chr16:16945308-16945162 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
55, 27
               

               
Conread position:
               
163-361
               

               
Cow position:
               
chr16:8090542-8090346 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
112, 33
               

               
Conread position:
               
163-395
               

               
Cow position:
               
chr16:16178018-16178241 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
10, 108
               

               
Conread position:
               
163-404
               

               
Cow position:
               
chr16:10171528-10171773 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
110, 33
               

               
Conread position:
               
163-411
               

               
Cow position:
               
chr16:10122511-10122267 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
147, 5
               

               
Conread position:
               
165-396
               

               
Cow position:
               
chr16:12454796-12454556 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
134, 34
               

               
Conread position:
               
168-281
               

               
Cow position:
               
chr16:6232251-6232362 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
114
               

               
Alignm identity:
               
91
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
31, 0
               

               
Conread position:
               
168-314
               

               
Cow position:
               
chr16:28922768-28922912 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
168-331
               

               
Cow position:
               
chr16:34412804-34412958 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
31, 0
               

               
Conread position:
               
168-361
               

               
Cow position:
               
chr16:27051040-27051231 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
31, 0
               

               
Conread position:
               
168-379
               

               
Cow position:
               
chr16:46552789-46552997 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
195, 36
               

               
Conread position:
               
168-409
               

               
Cow position:
               
chr16:7011064-7011300 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
124, 22
               

               
Conread position:
               
168-409
               

               
Cow position:
               
chr16:23811119-23811351 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
69, 22
               

               
Conread position:
               
168-411
               

               
Cow position:
               
chr16:14210777-14210545 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
204, 28
               

               
Conread position:
               
168-418
               

               
Cow position:
               
chr16:24202870-24202615 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
145, 31
               

               
Conread position:
               
169-346
               

               
Cow position:
               
chr16:47662721-47662899 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
29, 0
               

               
Conread position:
               
169-353
               

               
Cow position:
               
chr16:16945717-16945528 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
49, 22
               

               
Conread position:
               
169-356
               

               
Cow position:
               
chr16:30908951-30908771 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
169-387
               

               
Cow position:
               
chr16:9836777-9836568 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
192, 36
               

               
Conread position:
               
170-386
               

               
Cow position:
               
chr16:19053886-19053679 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
170-419
               

               
Cow position:
               
chr16:7928388-7928140 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
202, 20
               

               
Conread position:
               
171-361
               

               
Cow position:
               
chr16:12057049-12057235 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
126, 18
               

               
Conread position:
               
171-363
               

               
Cow position:
               
chr16:43866856-43866661 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
25, 98
               

               
Conread position:
               
171-376
               

               
Cow position:
               
chr16:15415738-15415524 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
62, 28
               

               
Conread position:
               
171-378
               

               
Cow position:
               
chr16:15714107-15714316 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
191, 27
               

               
Conread position:
               
171-386
               

               
Cow position:
               
chr16:10249821-10249604 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
111, 19
               

               
Conread position:
               
171-387
               

               
Cow position:
               
chr16:9079337-9079538 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
28, 0
               

               
Conread position:
               
171-408
               

               
Cow position:
               
chr16:45193811-45193575 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
191, 28
               

               
Conread position:
               
171-409
               

               
Cow position:
               
chr16:30211452-30211681 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
209, 19
               

               
Conread position:
               
172-361
               

               
Cow position:
               
chr16:40029885-40029702 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
172-382
               

               
Cow position:
               
chr16:7723700-7723902 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
173-411
               

               
Cow position:
               
chr16:56912690-56912458 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
9, 22
               

               
Conread position:
               
174-378
               

               
Cow position:
               
chr16:43758645-43758447 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
174-387
               

               
Cow position:
               
chr16:56670918-56670697 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
125, 25
               

               
Conread position:
               
174-389
               

               
Cow position:
               
chr16:12507261-12507043 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
108, 25
               

               
Conread position:
               
175-359
               

               
Cow position:
               
chr16:4507696-4507872 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
19, 14
               

               
Conread position:
               
175-387
               

               
Cow position:
               
chr16:9615215-9615008 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
175-387
               

               
Cow position:
               
chr16:21974964-21974746 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
121, 179
               

               
Conread position:
               
175-388
               

               
Cow position:
               
chr16:10020539-10020756 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
14, 172
               

               
Conread position:
               
175-401
               

               
Cow position:
               
chr16:12091654-12091881 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
11, 59
               

               
Conread position:
               
175-409
               

               
Cow position:
               
chr16:10032869-10033097 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
187, 24
               

               
Conread position:
               
176-348
               

               
Cow position:
               
chr16:5243090-5243260 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
99, 16
               

               
Conread position:
               
176-374
               

               
Cow position:
               
chr16:17474768-17474951 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
176-377
               

               
Cow position:
               
chr16:9513297-9513495 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
137, 21
               

               
Conread position:
               
176-383
               

               
Cow position:
               
chr16:28199032-28199232 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
191, 21
               

               
Conread position:
               
176-387
               

               
Cow position:
               
chr16:39030096-39029886 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
78, 21
               

               
Conread position:
               
176-387
               

               
Cow position:
               
chr16:42038064-42038278 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
9, 21
               

               
Conread position:
               
176-402
               

               
Cow position:
               
chr16:3032714-3032491 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
177-359
               

               
Cow position:
               
chr16:9242200-9242389 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
177-383
               

               
Cow position:
               
chr16:55961326-55961120 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
193, 186
               

               
Conread position:
               
177-387
               

               
Cow position:
               
chr16:22776418-22776209 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
199, 13
               

               
Conread position:
               
177-391
               

               
Cow position:
               
chr16:12091659-12091438 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
82, 22
               

               
Conread position:
               
179-297
               

               
Cow position:
               
chr16:20265557-20265441 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
120
               

               
Alignm identity:
               
97
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
84, 20
               

               
Conread position:
               
179-395
               

               
Cow position:
               
chr16:10011845-10011625 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
14, 8
               

               
Conread position:
               
179-435
               

               
Cow position:
               
chr16:42253393-42253146 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
197, 20
               

               
Conread position:
               
180-354
               

               
Cow position:
               
chr16:8469684-8469856 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
180-412
               

               
Cow position:
               
chr16:8810090-8809856 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
5, 89
               

               
Conread position:
               
181-361
               

               
Cow position:
               
chr16:15949502-15949325 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
12, 6
               

               
Conread position:
               
182-387
               

               
Cow position:
               
chr16:44144397-44144599 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
103, 17
               

               
Conread position:
               
182-388
               

               
Cow position:
               
chr16:24674669-24674465 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
103, 17
               

               
Conread position:
               
184-359
               

               
Cow position:
               
chr16:28775714-28775539 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
26, 142
               

               
Conread position:
               
185-387
               

               
Cow position:
               
chr16:45278548-45278745 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
187-384
               

               
Cow position:
               
chr16:33629436-33629623 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
31, 16
               

               
Conread position:
               
188-378
               

               
Cow position:
               
chr16:13791616-13791811 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
117, 53
               

               
Conread position:
               
188-393
               

               
Cow position:
               
chr16:16025448-16025663 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
6, 0
               

               
Conread position:
               
189-387
               

               
Cow position:
               
chr16:15203356-15203142 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
5, 170
               

               
Conread position:
               
190-361
               

               
Cow position:
               
chr16:47274709-47274541 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
190-387
               

               
Cow position:
               
chr16:25419239-25419044 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
173, 0
               

               
Conread position:
               
190-395
               

               
Cow position:
               
chr16:51531397-51531195 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
92, 79
               

               
Conread position:
               
190-429
               

               
Cow position:
               
chr16:43712473-43712710 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
92, 24
               

               
Conread position:
               
191-399
               

               
Cow position:
               
chr16:14343595-14343800 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
166, 0
               

               
Conread position:
               
191-401
               

               
Cow position:
               
chr16:9097039-9097253 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
172, 0
               

               
Conread position:
               
191-409
               

               
Cow position:
               
chr16:19282020-19282235 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
13, 133
               

               
Conread position:
               
191-418
               

               
Cow position:
               
chr16:12976484-12976709 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
123, 81
               

               
Conread position:
               
192-368
               

               
Cow position:
               
chr16:39385508-39385679 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
77, 0
               

               
Conread position:
               
192-377
               

               
Cow position:
               
chr16:53451722-53451908 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
166, 99
               

               
Conread position:
               
192-379
               

               
Cow position:
               
chr16:8288930-8288751 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
192-381
               

               
Cow position:
               
chr16:17180176-17180366 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
51, 100
               

               
Conread position:
               
192-382
               

               
Cow position:
               
chr16:11365043-11364850 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
88, 71
               

               
Conread position:
               
192-385
               

               
Cow position:
               
chr16:20743297-20743111 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
124, 0
               

               
Conread position:
               
192-387
               

               
Cow position:
               
chr16:21044313-21044513 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
88, 73
               

               
Conread position:
               
192-387
               

               
Cow position:
               
chr16:33302201-33302392 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
103, 0
               

               
Conread position:
               
192-390
               

               
Cow position:
               
chr16:33290401-33290605 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
170, 0
               

               
Conread position:
               
193-357
               

               
Cow position:
               
chr16:12458065-12457904 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
10, 0
               

               
Conread position:
               
193-359
               

               
Cow position:
               
chr16:6802672-6802501 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
96, 0
               

               
Conread position:
               
193-387
               

               
Cow position:
               
chr16:21442593-21442395 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
101, 61
               

               
Conread position:
               
193-387
               

               
Cow position:
               
chr16:38581020-38581215 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
89, 72
               

               
Conread position:
               
193-394
               

               
Cow position:
               
chr16:12251038-12251236 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
22, 29
               

               
Conread position:
               
193-402
               

               
Cow position:
               
chr16:28979850-28980061 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
72, 105
               

               
Conread position:
               
193-404
               

               
Cow position:
               
chr16:42107646-42107859 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
23, 208
               

               
Conread position:
               
194-333
               

               
Cow position:
               
chr16:22927541-22927677 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
98, 0
               

               
Conread position:
               
194-382
               

               
Cow position:
               
chr16:38355410-38355229 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
151, 107
               

               
Conread position:
               
194-387
               

               
Cow position:
               
chr16:4615076-4615270 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
80, 71
               

               
Conread position:
               
194-387
               

               
Cow position:
               
chr16:18429606-18429795 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
98, 0
               

               
Conread position:
               
195-361
               

               
Cow position:
               
chr16:56579929-56580090 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
63, 0
               

               
Conread position:
               
195-378
               

               
Cow position:
               
chr16:9987048-9986857 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
102, 177
               

               
Conread position:
               
195-378
               

               
Cow position:
               
chr16:28233285-28233100 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
160, 0
               

               
Conread position:
               
195-389
               

               
Cow position:
               
chr16:29311543-29311737 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
97, 170
               

               
Conread position:
               
195-400
               

               
Cow position:
               
chr16:12836209-12836003 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
142, 153
               

               
Conread position:
               
195-403
               

               
Cow position:
               
chr16:16163686-16163488 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
131, 103
               

               
Conread position:
               
196-361
               

               
Cow position:
               
chr16:3049133-3048969 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
41, 53
               

               
Conread position:
               
196-361
               

               
Cow position:
               
chr16:4277533-4277369 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
41, 53
               

               
Conread position:
               
196-376
               

               
Cow position:
               
chr16:50569284-50569462 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
167, 103
               

               
Conread position:
               
197-361
               

               
Cow position:
               
chr16:14226748-14226595 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
89, 0
               

               
Conread position:
               
197-361
               

               
Cow position:
               
chr16:33717075-33717239 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
83, 56
               

               
Conread position:
               
197-382
               

               
Cow position:
               
chr16:12111944-12111764 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
175, 93
               

               
Conread position:
               
197-387
               

               
Cow position:
               
chr16:48455701-48455885 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
157, 50
               

               
Conread position:
               
197-389
               

               
Cow position:
               
chr16:11019493-11019304 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
44, 0
               

               
Conread position:
               
198-361
               

               
Cow position:
               
chr16:12281173-12281001 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
92, 0
               

               
Conread position:
               
198-389
               

               
Cow position:
               
chr16:6026975-6026785 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
94, 45
               

               
Conread position:
               
198-390
               

               
Cow position:
               
chr16:24672840-24672649 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
96, 80
               

               
Conread position:
               
198-409
               

               
Cow position:
               
chr16:52325576-52325365 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
200, 165
               

               
Conread position:
               
199-387
               

               
Cow position:
               
chr16:336564-336377 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
58, 54
               

               
Conread position:
               
199-414
               

               
Cow position:
               
chr16:27327102-27326886 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
13, 165
               

               
Conread position:
               
200-359
               

               
Cow position:
               
chr16:27759581-27759419 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
201-330
               

               
Cow position:
               
chr16:44954245-44954381 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
31, 19
               

               
Conread position:
               
201-361
               

               
Cow position:
               
chr16:11654068-11654227 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
115, 0
               

               
Conread position:
               
201-382
               

               
Cow position:
               
chr16:30646538-30646714 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
175, 87
               

               
Conread position:
               
201-391
               

               
Cow position:
               
chr16:17665679-17665868 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
166, 123
               

               
Conread position:
               
203-359
               

               
Cow position:
               
chr16:29060405-29060565 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
98, 0
               

               
Conread position:
               
203-386
               

               
Cow position:
               
chr16:43322877-43323070 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
88, 0
               

               
Conread position:
               
204-378
               

               
Cow position:
               
chr16:17617334-17617161 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
159, 0
               

               
Conread position:
               
204-387
               

               
Cow position:
               
chr16:23088874-23089050 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
168, 33
               

               
Conread position:
               
204-389
               

               
Cow position:
               
chr16:33073852-33073675 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
168, 39
               

               
Conread position:
               
204-392
               

               
Cow position:
               
chr16:49734116-49733932 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
205-386
               

               
Cow position:
               
chr16:34506381-34506554 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
173, 85
               

               
Conread position:
               
206-361
               

               
Cow position:
               
chr16:41696039-41696189 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
89, 0
               

               
Conread position:
               
206-407
               

               
Cow position:
               
chr16:17746068-17746269 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
156, 52
               

               
Conread position:
               
207-426
               

               
Cow position:
               
chr16:31011359-31011577 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
38, 30
               

               
Conread position:
               
208-396
               

               
Cow position:
               
chr16:18668993-18669178 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
65, 54
               

               
Conread position:
               
212-361
               

               
Cow position:
               
chr16:46184194-46184344 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
140, 0
               

               
Conread position:
               
213-361
               

               
Cow position:
               
chr16:16542887-16543035 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
67, 49
               

               
Conread position:
               
215-386
               

               
Cow position:
               
chr16:23187584-23187759 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
74, 161
               

               
Conread position:
               
215-386
               

               
Cow position:
               
chr16:23515726-23515560 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
30, 22
               

               
Conread position:
               
215-389
               

               
Cow position:
               
chr16:5396777-5396601 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
147, 88
               

               
Conread position:
               
215-392
               

               
Cow position:
               
chr16:23053863-23054042 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
95, 151
               

               
Conread position:
               
219-361
               

               
Cow position:
               
chr16:38543813-38543959 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
86, 135
               

               
Conread position:
               
220-394
               

               
Cow position:
               
chr16:42992261-42992440 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
143, 0
               

               
Conread position:
               
221-378
               

               
Cow position:
               
chr16:51393345-51393188 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
84, 50
               

               
Conread position:
               
222-382
               

               
Cow position:
               
chr16:25657149-25657307 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
77, 106
               

               
Conread position:
               
222-384
               

               
Cow position:
               
chr16:53406431-53406589 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
222-386
               

               
Cow position:
               
chr16:30055055-30054891 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
154, 63
               

               
Conread position:
               
223-361
               

               
Cow position:
               
chr16:8083882-8083744 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
56, 46
               

               
Conread position:
               
223-361
               

               
Cow position:
               
chr16:33458628-33458762 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
223-401
               

               
Cow position:
               
chr16:28001185-28001006 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
76, 143
               

               
Conread position:
               
223-402
               

               
Cow position:
               
chr16:23881163-23880991 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
228-388
               

               
Cow position:
               
chr16:41653026-41653181 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
76, 0
               

               
Conread position:
               
230-406
               

               
Cow position:
               
chr16:4911391-4911221 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
133, 69
               

               
Conread position:
               
238-387
               

               
Cow position:
               
chr16:30368763-30368618 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
30, 0
               

               
Conread position:
               
239-404
               

               
Cow position:
               
chr16:51216982-51216818 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
134, 70
               

               
Conread position:
               
244-383
               

               
Cow position:
               
chr16:7727974-7727835 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
59, 21
               

               
Conread position:
               
244-396
               

               
Cow position:
               
chr16:24671982-24671822 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
49, 126
               

               
Conread position:
               
246-402
               

               
Cow position:
               
chr16:13770829-13770998 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
47, 0
               
Show alignments to all cow chromosomes.