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Cow genome map

           
Conread name:
           
rche35_a23.y1
        

               
Conread position:
               
107-292
               

               
Cow position:
               
chr19:46713560-46713741 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
26, 7
               

               
Conread position:
               
114-361
               

               
Cow position:
               
chr19:6079430-6079179 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
13, 41
               

               
Conread position:
               
114-400
               

               
Cow position:
               
chr19:8869509-8869785 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
266, 39
               

               
Conread position:
               
116-404
               

               
Cow position:
               
chr19:22959955-22959657 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
26, 93
               

               
Conread position:
               
121-301
               

               
Cow position:
               
chr19:31536064-31536236 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
124-361
               

               
Cow position:
               
chr19:13325546-13325327 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
78, 0
               

               
Conread position:
               
126-279
               

               
Cow position:
               
chr19:31595243-31595393 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
126-289
               

               
Cow position:
               
chr19:25807359-25807205 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
73, 0
               

               
Conread position:
               
126-294
               

               
Cow position:
               
chr19:39781460-39781627 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
12, 29
               

               
Conread position:
               
126-294
               

               
Cow position:
               
chr19:56063489-56063322 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
25, 74
               

               
Conread position:
               
126-353
               

               
Cow position:
               
chr19:1664250-1664020 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
25, 74
               

               
Conread position:
               
126-361
               

               
Cow position:
               
chr19:21816907-21817137 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
8.99634e-43
               

               
Alignm gaps (pig, cow):
               
20, 74
               

               
Conread position:
               
126-361
               

               
Cow position:
               
chr19:25410901-25410683 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
63, 0
               

               
Conread position:
               
126-361
               

               
Cow position:
               
chr19:32506178-32505937 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
53, 27
               

               
Conread position:
               
126-373
               

               
Cow position:
               
chr19:15092192-15091958 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
18, 74
               

               
Conread position:
               
126-381
               

               
Cow position:
               
chr19:4987823-4987576 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
73, 0
               

               
Conread position:
               
126-386
               

               
Cow position:
               
chr19:52750816-52750560 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
237, 27
               

               
Conread position:
               
126-387
               

               
Cow position:
               
chr19:729801-729553 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
8.99634e-43
               

               
Alignm gaps (pig, cow):
               
66, 0
               

               
Conread position:
               
126-387
               

               
Cow position:
               
chr19:41695722-41695477 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
18, 63
               

               
Conread position:
               
126-388
               

               
Cow position:
               
chr19:33575466-33575716 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
35, 0
               

               
Conread position:
               
126-395
               

               
Cow position:
               
chr19:11439051-11439319 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
156, 27
               

               
Conread position:
               
126-406
               

               
Cow position:
               
chr19:28810376-28810100 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
119, 64
               

               
Conread position:
               
127-289
               

               
Cow position:
               
chr19:4503164-4503322 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
19, 73
               

               
Conread position:
               
127-297
               

               
Cow position:
               
chr19:2224155-2223993 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
24, 60
               

               
Conread position:
               
127-312
               

               
Cow position:
               
chr19:10114688-10114510 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
66, 0
               

               
Conread position:
               
127-389
               

               
Cow position:
               
chr19:36845193-36845444 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
245, 26
               

               
Conread position:
               
127-404
               

               
Cow position:
               
chr19:6417540-6417826 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
78, 26
               

               
Conread position:
               
129-359
               

               
Cow position:
               
chr19:23394731-23394954 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
134, 54
               

               
Conread position:
               
129-361
               

               
Cow position:
               
chr19:35762307-35762084 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
139, 116
               

               
Conread position:
               
129-386
               

               
Cow position:
               
chr19:21176797-21176552 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
129-406
               

               
Cow position:
               
chr19:46094693-46094409 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 71
               

               
Conread position:
               
129-408
               

               
Cow position:
               
chr19:10081021-10081304 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
163, 20
               

               
Conread position:
               
130-293
               

               
Cow position:
               
chr19:7473638-7473805 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
130-294
               

               
Cow position:
               
chr19:7884525-7884685 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
130-297
               

               
Cow position:
               
chr19:10242528-10242687 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
59, 0
               

               
Conread position:
               
130-312
               

               
Cow position:
               
chr19:19919515-19919337 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
130-361
               

               
Cow position:
               
chr19:18505221-18504995 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
152, 14
               

               
Conread position:
               
130-374
               

               
Cow position:
               
chr19:39576624-39576391 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
8, 59
               

               
Conread position:
               
130-382
               

               
Cow position:
               
chr19:22779150-22779403 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
17, 24
               

               
Conread position:
               
130-382
               

               
Cow position:
               
chr19:23087930-23088174 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
245, 23
               

               
Conread position:
               
130-386
               

               
Cow position:
               
chr19:43413724-43413974 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
10, 61
               

               
Conread position:
               
130-387
               

               
Cow position:
               
chr19:2577511-2577762 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
232, 69
               

               
Conread position:
               
130-387
               

               
Cow position:
               
chr19:9531187-9531448 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
62, 23
               

               
Conread position:
               
130-395
               

               
Cow position:
               
chr19:3216963-3217215 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
233, 23
               

               
Conread position:
               
130-396
               

               
Cow position:
               
chr19:20935700-20935958 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
118, 23
               

               
Conread position:
               
130-403
               

               
Cow position:
               
chr19:6309971-6309712 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
68, 0
               

               
Conread position:
               
130-403
               

               
Cow position:
               
chr19:39777217-39776935 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
58, 28
               

               
Conread position:
               
130-404
               

               
Cow position:
               
chr19:11191670-11191409 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
223, 24
               

               
Conread position:
               
130-411
               

               
Cow position:
               
chr19:41024169-41024443 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
117, 69
               

               
Conread position:
               
131-283
               

               
Cow position:
               
chr19:36125531-36125683 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
131-379
               

               
Cow position:
               
chr19:5406443-5406694 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
13, 61
               

               
Conread position:
               
131-382
               

               
Cow position:
               
chr19:34758056-34757800 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
163, 59
               

               
Conread position:
               
132-382
               

               
Cow position:
               
chr19:53623511-53623760 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
158, 22
               

               
Conread position:
               
132-387
               

               
Cow position:
               
chr19:9148887-9149138 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
153, 64
               

               
Conread position:
               
133-292
               

               
Cow position:
               
chr19:11424365-11424212 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
133-297
               

               
Cow position:
               
chr19:12711927-12711765 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
66, 0
               

               
Conread position:
               
133-344
               

               
Cow position:
               
chr19:47859366-47859157 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
151, 20
               

               
Conread position:
               
133-358
               

               
Cow position:
               
chr19:34287969-34288181 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
11, 58
               

               
Conread position:
               
133-359
               

               
Cow position:
               
chr19:28447388-28447609 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
11, 62
               

               
Conread position:
               
133-361
               

               
Cow position:
               
chr19:4459494-4459271 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
12, 59
               

               
Conread position:
               
133-361
               

               
Cow position:
               
chr19:13488555-13488335 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
9, 159
               

               
Conread position:
               
133-361
               

               
Cow position:
               
chr19:42517307-42517083 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
61, 51
               

               
Conread position:
               
133-361
               

               
Cow position:
               
chr19:47453381-47453602 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
133-375
               

               
Cow position:
               
chr19:43431378-43431133 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
152, 20
               

               
Conread position:
               
133-382
               

               
Cow position:
               
chr19:23084803-23085054 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
223, 63
               

               
Conread position:
               
133-382
               

               
Cow position:
               
chr19:50161937-50162186 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
71, 28
               

               
Conread position:
               
133-385
               

               
Cow position:
               
chr19:5913008-5912758 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
104, 56
               

               
Conread position:
               
133-385
               

               
Cow position:
               
chr19:10597447-10597679 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
15, 58
               

               
Conread position:
               
133-386
               

               
Cow position:
               
chr19:10238685-10238936 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
229, 57
               

               
Conread position:
               
133-386
               

               
Cow position:
               
chr19:25382738-25382483 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
166, 20
               

               
Conread position:
               
133-387
               

               
Cow position:
               
chr19:43796-44040 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
18, 41
               

               
Conread position:
               
133-387
               

               
Cow position:
               
chr19:10755258-10755498 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
239, 28
               

               
Conread position:
               
133-387
               

               
Cow position:
               
chr19:20666124-20665872 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
12, 65
               

               
Conread position:
               
133-387
               

               
Cow position:
               
chr19:26753985-26754240 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
110, 20
               

               
Conread position:
               
133-387
               

               
Cow position:
               
chr19:38842613-38842355 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
21, 65
               

               
Conread position:
               
133-387
               

               
Cow position:
               
chr19:39622839-39622588 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
160, 20
               

               
Conread position:
               
133-389
               

               
Cow position:
               
chr19:24759933-24759690 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
96, 20
               

               
Conread position:
               
133-390
               

               
Cow position:
               
chr19:16694083-16693813 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
160, 20
               

               
Conread position:
               
133-393
               

               
Cow position:
               
chr19:7148115-7147847 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
25, 20
               

               
Conread position:
               
133-394
               

               
Cow position:
               
chr19:10186453-10186713 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
14, 23
               

               
Conread position:
               
133-401
               

               
Cow position:
               
chr19:33903474-33903213 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
229, 21
               

               
Conread position:
               
133-404
               

               
Cow position:
               
chr19:25769619-25769888 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
7, 59
               

               
Conread position:
               
133-404
               

               
Cow position:
               
chr19:33912676-33912403 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
227, 63
               

               
Conread position:
               
133-404
               

               
Cow position:
               
chr19:42564093-42564364 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
229, 65
               

               
Conread position:
               
133-417
               

               
Cow position:
               
chr19:28014427-28014711 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
14, 55
               

               
Conread position:
               
133-418
               

               
Cow position:
               
chr19:39057191-39057480 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
88, 20
               

               
Conread position:
               
134-297
               

               
Cow position:
               
chr19:25652805-25652649 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
153, 18
               

               
Conread position:
               
134-346
               

               
Cow position:
               
chr19:8982636-8982423 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
58, 19
               

               
Conread position:
               
134-355
               

               
Cow position:
               
chr19:12709862-12709637 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
11, 61
               

               
Conread position:
               
134-358
               

               
Cow position:
               
chr19:7741648-7741433 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
21, 10
               

               
Conread position:
               
134-359
               

               
Cow position:
               
chr19:31875350-31875572 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
18, 63
               

               
Conread position:
               
134-360
               

               
Cow position:
               
chr19:24453562-24453338 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
65, 0
               

               
Conread position:
               
134-361
               

               
Cow position:
               
chr19:11110783-11110558 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
17, 25
               

               
Conread position:
               
134-371
               

               
Cow position:
               
chr19:11171267-11171033 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
17, 25
               

               
Conread position:
               
134-378
               

               
Cow position:
               
chr19:49290503-49290271 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
134-381
               

               
Cow position:
               
chr19:3812067-3811827 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
30, 66
               

               
Conread position:
               
134-381
               

               
Cow position:
               
chr19:32031297-32031044 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
12, 62
               

               
Conread position:
               
134-385
               

               
Cow position:
               
chr19:25570546-25570786 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
10, 66
               

               
Conread position:
               
134-387
               

               
Cow position:
               
chr19:17297117-17297358 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
10, 60
               

               
Conread position:
               
134-387
               

               
Cow position:
               
chr19:39758470-39758717 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
23, 64
               

               
Conread position:
               
134-387
               

               
Cow position:
               
chr19:47185131-47184882 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
111, 19
               

               
Conread position:
               
134-390
               

               
Cow position:
               
chr19:2589458-2589714 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
81, 72
               

               
Conread position:
               
134-390
               

               
Cow position:
               
chr19:8128255-8128507 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
191, 19
               

               
Conread position:
               
134-391
               

               
Cow position:
               
chr19:22043403-22043156 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
56, 0
               

               
Conread position:
               
134-394
               

               
Cow position:
               
chr19:53371948-53371692 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
209, 40
               

               
Conread position:
               
134-402
               

               
Cow position:
               
chr19:6867411-6867136 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
8, 63
               

               
Conread position:
               
134-409
               

               
Cow position:
               
chr19:36097171-36097448 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
123, 19
               

               
Conread position:
               
134-413
               

               
Cow position:
               
chr19:52456808-52456523 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
147, 9
               

               
Conread position:
               
134-454
               

               
Cow position:
               
chr19:12645694-12645393 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
60, 19
               

               
Conread position:
               
135-378
               

               
Cow position:
               
chr19:46454796-46455028 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
6, 57
               

               
Conread position:
               
135-387
               

               
Cow position:
               
chr19:53791480-53791232 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
124, 57
               

               
Conread position:
               
135-400
               

               
Cow position:
               
chr19:7668653-7668904 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
135-404
               

               
Cow position:
               
chr19:3621382-3621644 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
199, 9
               

               
Conread position:
               
135-409
               

               
Cow position:
               
chr19:254851-254576 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
13, 63
               

               
Conread position:
               
135-418
               

               
Cow position:
               
chr19:6601761-6601490 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
28, 62
               

               
Conread position:
               
136-356
               

               
Cow position:
               
chr19:55247584-55247795 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
136-361
               

               
Cow position:
               
chr19:25526236-25526450 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
57, 17
               

               
Conread position:
               
136-379
               

               
Cow position:
               
chr19:39613213-39612983 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
136-395
               

               
Cow position:
               
chr19:25763063-25763308 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
7, 56
               

               
Conread position:
               
136-400
               

               
Cow position:
               
chr19:55590184-55590444 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
234, 67
               

               
Conread position:
               
136-409
               

               
Cow position:
               
chr19:13121322-13121062 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
225, 17
               

               
Conread position:
               
136-410
               

               
Cow position:
               
chr19:22992440-22992172 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
137, 17
               

               
Conread position:
               
137-290
               

               
Cow position:
               
chr19:6154645-6154489 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
56, 16
               

               
Conread position:
               
137-297
               

               
Cow position:
               
chr19:33241554-33241396 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
51, 0
               

               
Conread position:
               
137-312
               

               
Cow position:
               
chr19:7404423-7404252 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
137-379
               

               
Cow position:
               
chr19:10213624-10213855 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
65, 0
               

               
Conread position:
               
137-379
               

               
Cow position:
               
chr19:21199091-21199339 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
153, 53
               

               
Conread position:
               
137-387
               

               
Cow position:
               
chr19:7674216-7674462 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
59, 0
               

               
Conread position:
               
138-312
               

               
Cow position:
               
chr19:12705885-12705714 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
52, 0
               

               
Conread position:
               
138-359
               

               
Cow position:
               
chr19:41584922-41585141 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
155, 52
               

               
Conread position:
               
138-361
               

               
Cow position:
               
chr19:21378516-21378295 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
9, 28
               

               
Conread position:
               
138-382
               

               
Cow position:
               
chr19:13267234-13267014 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
234, 15
               

               
Conread position:
               
138-390
               

               
Cow position:
               
chr19:51285592-51285837 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
10, 62
               

               
Conread position:
               
138-397
               

               
Cow position:
               
chr19:20622608-20622867 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
55, 15
               

               
Conread position:
               
138-404
               

               
Cow position:
               
chr19:12747820-12747565 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
151, 15
               

               
Conread position:
               
139-293
               

               
Cow position:
               
chr19:43647368-43647523 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
98, 14
               

               
Conread position:
               
139-359
               

               
Cow position:
               
chr19:43372993-43373217 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
160, 60
               

               
Conread position:
               
139-361
               

               
Cow position:
               
chr19:14563325-14563537 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
60, 0
               

               
Conread position:
               
139-361
               

               
Cow position:
               
chr19:15068054-15067838 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
53, 76
               

               
Conread position:
               
139-377
               

               
Cow position:
               
chr19:1978125-1978366 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
13, 155
               

               
Conread position:
               
139-378
               

               
Cow position:
               
chr19:268309-268536 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
233, 15
               

               
Conread position:
               
139-378
               

               
Cow position:
               
chr19:8965219-8965463 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
144, 52
               

               
Conread position:
               
139-378
               

               
Cow position:
               
chr19:14632082-14631849 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
9, 22
               

               
Conread position:
               
139-379
               

               
Cow position:
               
chr19:15887365-15887123 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
159, 14
               

               
Conread position:
               
139-382
               

               
Cow position:
               
chr19:8876829-8876612 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
237, 14
               

               
Conread position:
               
139-383
               

               
Cow position:
               
chr19:47986813-47987043 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
60, 0
               

               
Conread position:
               
139-384
               

               
Cow position:
               
chr19:6344027-6344276 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 54
               

               
Conread position:
               
139-388
               

               
Cow position:
               
chr19:23889533-23889289 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
51, 0
               

               
Conread position:
               
139-389
               

               
Cow position:
               
chr19:41497690-41497443 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
8, 23
               

               
Conread position:
               
139-394
               

               
Cow position:
               
chr19:38111424-38111671 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
217, 60
               

               
Conread position:
               
139-406
               

               
Cow position:
               
chr19:11560087-11559819 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
97, 51
               

               
Conread position:
               
139-407
               

               
Cow position:
               
chr19:52185811-52185537 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
179, 14
               

               
Conread position:
               
139-408
               

               
Cow position:
               
chr19:19804575-19804302 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
8, 56
               

               
Conread position:
               
139-425
               

               
Cow position:
               
chr19:28554393-28554120 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
13, 51
               

               
Conread position:
               
139-435
               

               
Cow position:
               
chr19:19431176-19431462 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
93, 60
               

               
Conread position:
               
140-311
               

               
Cow position:
               
chr19:30886352-30886519 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
140-341
               

               
Cow position:
               
chr19:32539714-32539519 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
157, 14
               

               
Conread position:
               
140-361
               

               
Cow position:
               
chr19:48960353-48960564 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
115, 50
               

               
Conread position:
               
140-377
               

               
Cow position:
               
chr19:10538596-10538367 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
222, 50
               

               
Conread position:
               
140-379
               

               
Cow position:
               
chr19:15438056-15438298 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
11, 48
               

               
Conread position:
               
140-380
               

               
Cow position:
               
chr19:3870562-3870791 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
126, 50
               

               
Conread position:
               
140-382
               

               
Cow position:
               
chr19:41498041-41497802 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
215, 18
               

               
Conread position:
               
140-387
               

               
Cow position:
               
chr19:17869157-17868920 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
14, 48
               

               
Conread position:
               
140-387
               

               
Cow position:
               
chr19:42694952-42695185 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
140-387
               

               
Cow position:
               
chr19:55957613-55957372 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
174, 49
               

               
Conread position:
               
140-389
               

               
Cow position:
               
chr19:33988024-33988269 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
227, 13
               

               
Conread position:
               
140-404
               

               
Cow position:
               
chr19:51751210-51750949 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
224, 59
               

               
Conread position:
               
141-291
               

               
Cow position:
               
chr19:22799120-22798973 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
31, 12
               

               
Conread position:
               
141-331
               

               
Cow position:
               
chr19:34819231-34819044 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
52, 12
               

               
Conread position:
               
141-335
               

               
Cow position:
               
chr19:15362745-15362552 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
10, 59
               

               
Conread position:
               
141-347
               

               
Cow position:
               
chr19:32457599-32457801 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
141-358
               

               
Cow position:
               
chr19:14472828-14472610 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
11, 60
               

               
Conread position:
               
141-361
               

               
Cow position:
               
chr19:26976112-26975900 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
10, 62
               

               
Conread position:
               
141-381
               

               
Cow position:
               
chr19:33747806-33748048 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
139, 55
               

               
Conread position:
               
141-382
               

               
Cow position:
               
chr19:387093-387328 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
45, 12
               

               
Conread position:
               
141-391
               

               
Cow position:
               
chr19:7637279-7637027 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
221, 55
               

               
Conread position:
               
141-408
               

               
Cow position:
               
chr19:22039731-22039988 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
141-413
               

               
Cow position:
               
chr19:40323776-40324042 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
142-289
               

               
Cow position:
               
chr19:50682484-50682343 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
142-362
               

               
Cow position:
               
chr19:31652516-31652733 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
142-387
               

               
Cow position:
               
chr19:2221118-2220876 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
57, 0
               

               
Conread position:
               
142-387
               

               
Cow position:
               
chr19:17354815-17355056 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
230, 57
               

               
Conread position:
               
143-297
               

               
Cow position:
               
chr19:39649117-39648966 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
40, 10
               

               
Conread position:
               
143-312
               

               
Cow position:
               
chr19:53840477-53840641 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
12, 57
               

               
Conread position:
               
143-358
               

               
Cow position:
               
chr19:25854924-25854711 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
46, 0
               

               
Conread position:
               
143-368
               

               
Cow position:
               
chr19:34608238-34608022 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
121, 10
               

               
Conread position:
               
143-387
               

               
Cow position:
               
chr19:38732098-38732333 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
10, 0
               

               
Conread position:
               
144-288
               

               
Cow position:
               
chr19:31846592-31846449 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
7, 56
               

               
Conread position:
               
144-289
               

               
Cow position:
               
chr19:11348603-11348745 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
129, 9
               

               
Conread position:
               
144-289
               

               
Cow position:
               
chr19:33468980-33469123 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
52, 0
               

               
Conread position:
               
144-294
               

               
Cow position:
               
chr19:11442949-11443098 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
79, 9
               

               
Conread position:
               
144-297
               

               
Cow position:
               
chr19:34620068-34619919 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
144-312
               

               
Cow position:
               
chr19:4800699-4800870 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
8, 46
               

               
Conread position:
               
144-312
               

               
Cow position:
               
chr19:43203029-43202865 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
144-328
               

               
Cow position:
               
chr19:43560558-43560733 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
9, 43
               

               
Conread position:
               
144-330
               

               
Cow position:
               
chr19:25397655-25397842 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
19, 9
               

               
Conread position:
               
144-333
               

               
Cow position:
               
chr19:23403685-23403498 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
52, 0
               

               
Conread position:
               
144-359
               

               
Cow position:
               
chr19:35107967-35107762 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
133, 49
               

               
Conread position:
               
144-361
               

               
Cow position:
               
chr19:3246090-3245884 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
170, 57
               

               
Conread position:
               
144-361
               

               
Cow position:
               
chr19:12114924-12115138 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
101, 9
               

               
Conread position:
               
144-376
               

               
Cow position:
               
chr19:6688040-6687812 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
161, 55
               

               
Conread position:
               
144-378
               

               
Cow position:
               
chr19:24137221-24137453 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
27, 56
               

               
Conread position:
               
144-378
               

               
Cow position:
               
chr19:43058494-43058730 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
145, 17
               

               
Conread position:
               
144-379
               

               
Cow position:
               
chr19:10930456-10930238 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
117, 14
               

               
Conread position:
               
144-381
               

               
Cow position:
               
chr19:34166331-34166563 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
218, 11
               

               
Conread position:
               
144-383
               

               
Cow position:
               
chr19:36221888-36222127 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
45, 9
               

               
Conread position:
               
144-384
               

               
Cow position:
               
chr19:43189882-43190122 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
100, 9
               

               
Conread position:
               
144-386
               

               
Cow position:
               
chr19:42235988-42236243 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
145, 9
               

               
Conread position:
               
144-387
               

               
Cow position:
               
chr19:4477160-4476919 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
10, 56
               

               
Conread position:
               
144-387
               

               
Cow position:
               
chr19:10971137-10970907 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
85, 9
               

               
Conread position:
               
144-387
               

               
Cow position:
               
chr19:13933396-13933641 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
48, 9
               

               
Conread position:
               
144-387
               

               
Cow position:
               
chr19:18921287-18921020 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
48, 9
               

               
Conread position:
               
144-387
               

               
Cow position:
               
chr19:40051433-40051200 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
155, 27
               

               
Conread position:
               
144-389
               

               
Cow position:
               
chr19:38664360-38664114 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
146, 9
               

               
Conread position:
               
144-390
               

               
Cow position:
               
chr19:39583900-39584146 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
7, 126
               

               
Conread position:
               
144-391
               

               
Cow position:
               
chr19:11194803-11194564 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
183, 55
               

               
Conread position:
               
144-391
               

               
Cow position:
               
chr19:13316459-13316205 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
147, 46
               

               
Conread position:
               
144-394
               

               
Cow position:
               
chr19:27940336-27940582 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
144-398
               

               
Cow position:
               
chr19:37467102-37466855 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
60, 0
               

               
Conread position:
               
144-399
               

               
Cow position:
               
chr19:23297689-23297948 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
35, 9
               

               
Conread position:
               
144-403
               

               
Cow position:
               
chr19:2068227-2068474 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
144-415
               

               
Cow position:
               
chr19:4297646-4297907 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
52, 0
               

               
Conread position:
               
145-292
               

               
Cow position:
               
chr19:36245533-36245389 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
54, 0
               

               
Conread position:
               
145-297
               

               
Cow position:
               
chr19:43292011-43292164 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
82, 54
               

               
Conread position:
               
145-347
               

               
Cow position:
               
chr19:25673561-25673367 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
8, 0
               

               
Conread position:
               
145-361
               

               
Cow position:
               
chr19:2965502-2965722 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
141, 44
               

               
Conread position:
               
145-368
               

               
Cow position:
               
chr19:55655321-55655531 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
8, 0
               

               
Conread position:
               
145-387
               

               
Cow position:
               
chr19:14253593-14253833 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
217, 8
               

               
Conread position:
               
145-387
               

               
Cow position:
               
chr19:23831311-23831545 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
148, 43
               

               
Conread position:
               
145-395
               

               
Cow position:
               
chr19:30471393-30471152 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
228, 9
               

               
Conread position:
               
145-409
               

               
Cow position:
               
chr19:26167951-26167701 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
48, 8
               

               
Conread position:
               
145-415
               

               
Cow position:
               
chr19:30007153-30007415 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
209, 8
               

               
Conread position:
               
146-368
               

               
Cow position:
               
chr19:11750360-11750144 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
7, 0
               

               
Conread position:
               
146-378
               

               
Cow position:
               
chr19:53542931-53542696 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
27, 49
               

               
Conread position:
               
146-382
               

               
Cow position:
               
chr19:27966185-27965949 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
136, 43
               

               
Conread position:
               
149-288
               

               
Cow position:
               
chr19:22134185-22134051 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
47, 0
               

               
Conread position:
               
149-291
               

               
Cow position:
               
chr19:36624453-36624318 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
44, 0
               

               
Conread position:
               
149-293
               

               
Cow position:
               
chr19:35233689-35233554 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
44, 37
               

               
Conread position:
               
149-334
               

               
Cow position:
               
chr19:39385077-39384896 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
50, 0
               

               
Conread position:
               
149-361
               

               
Cow position:
               
chr19:36138819-36139025 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
104, 45
               

               
Conread position:
               
149-386
               

               
Cow position:
               
chr19:50562645-50562881 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
213, 49
               

               
Conread position:
               
149-417
               

               
Cow position:
               
chr19:25665554-25665812 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
205, 50
               

               
Conread position:
               
149-438
               

               
Cow position:
               
chr19:43035205-43035492 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
223, 12
               

               
Conread position:
               
150-294
               

               
Cow position:
               
chr19:33237139-33237281 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
47, 0
               

               
Conread position:
               
150-300
               

               
Cow position:
               
chr19:20670941-20670793 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
40, 0
               

               
Conread position:
               
150-331
               

               
Cow position:
               
chr19:17020246-17020427 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
61, 41
               

               
Conread position:
               
150-341
               

               
Cow position:
               
chr19:30910109-30910289 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
86, 49
               

               
Conread position:
               
150-361
               

               
Cow position:
               
chr19:52270077-52269868 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
48, 0
               

               
Conread position:
               
150-371
               

               
Cow position:
               
chr19:6575910-6576127 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
87, 49
               

               
Conread position:
               
150-375
               

               
Cow position:
               
chr19:37067105-37067322 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
212, 39
               

               
Conread position:
               
150-378
               

               
Cow position:
               
chr19:6531852-6532066 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
212, 49
               

               
Conread position:
               
150-383
               

               
Cow position:
               
chr19:12698285-12698514 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
212, 37
               

               
Conread position:
               
150-385
               

               
Cow position:
               
chr19:4587773-4587533 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
146, 40
               

               
Conread position:
               
150-387
               

               
Cow position:
               
chr19:8864714-8864939 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
43, 0
               

               
Conread position:
               
150-388
               

               
Cow position:
               
chr19:24956272-24956045 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
219, 49
               

               
Conread position:
               
150-390
               

               
Cow position:
               
chr19:53378666-53378905 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
13, 38
               

               
Conread position:
               
150-399
               

               
Cow position:
               
chr19:28924722-28924972 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
189, 48
               

               
Conread position:
               
151-387
               

               
Cow position:
               
chr19:39361106-39361352 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
31, 54
               

               
Conread position:
               
153-307
               

               
Cow position:
               
chr19:7675202-7675355 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
112, 37
               

               
Conread position:
               
153-309
               

               
Cow position:
               
chr19:30241667-30241820 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
153-311
               

               
Cow position:
               
chr19:51774713-51774549 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
47, 0
               

               
Conread position:
               
153-361
               

               
Cow position:
               
chr19:22449958-22449746 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
110, 39
               

               
Conread position:
               
153-361
               

               
Cow position:
               
chr19:39664608-39664404 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
46, 0
               

               
Conread position:
               
153-378
               

               
Cow position:
               
chr19:35920821-35921038 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
10, 0
               

               
Conread position:
               
153-383
               

               
Cow position:
               
chr19:37405885-37406110 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
25, 47
               

               
Conread position:
               
153-385
               

               
Cow position:
               
chr19:35322167-35321943 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
117, 46
               

               
Conread position:
               
153-386
               

               
Cow position:
               
chr19:54942937-54943162 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
214, 37
               

               
Conread position:
               
153-387
               

               
Cow position:
               
chr19:433161-432923 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
145, 43
               

               
Conread position:
               
153-387
               

               
Cow position:
               
chr19:9391183-9390943 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
146, 46
               

               
Conread position:
               
153-387
               

               
Cow position:
               
chr19:54915724-54915478 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
132, 46
               

               
Conread position:
               
153-399
               

               
Cow position:
               
chr19:23304520-23304276 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
209, 33
               

               
Conread position:
               
153-399
               

               
Cow position:
               
chr19:39795158-39795403 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
209, 43
               

               
Conread position:
               
153-404
               

               
Cow position:
               
chr19:20379064-20378820 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
126, 40
               

               
Conread position:
               
154-334
               

               
Cow position:
               
chr19:39254476-39254296 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
147, 45
               

               
Conread position:
               
154-361
               

               
Cow position:
               
chr19:39104043-39103842 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
39, 22
               

               
Conread position:
               
154-395
               

               
Cow position:
               
chr19:35245911-35246155 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
8.99634e-43
               

               
Alignm gaps (pig, cow):
               
209, 42
               

               
Conread position:
               
155-361
               

               
Cow position:
               
chr19:38340011-38339804 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
14, 43
               

               
Conread position:
               
155-381
               

               
Cow position:
               
chr19:17824506-17824288 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
71, 39
               

               
Conread position:
               
155-393
               

               
Cow position:
               
chr19:28037936-28037713 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
212, 39
               

               
Conread position:
               
157-361
               

               
Cow position:
               
chr19:19460413-19460607 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
80, 42
               

               
Conread position:
               
157-378
               

               
Cow position:
               
chr19:49221649-49221430 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
187, 32
               

               
Conread position:
               
157-385
               

               
Cow position:
               
chr19:52187459-52187677 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
107, 34
               

               
Conread position:
               
157-411
               

               
Cow position:
               
chr19:1791730-1791474 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
61, 8
               

               
Conread position:
               
157-411
               

               
Cow position:
               
chr19:14347989-14348245 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
142, 30
               

               
Conread position:
               
158-359
               

               
Cow position:
               
chr19:6854306-6854117 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
35, 0
               

               
Conread position:
               
158-386
               

               
Cow position:
               
chr19:1355575-1355805 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
6, 39
               

               
Conread position:
               
158-404
               

               
Cow position:
               
chr19:38021417-38021656 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
8.00001e-42
               

               
Alignm gaps (pig, cow):
               
214, 41
               

               
Conread position:
               
158-419
               

               
Cow position:
               
chr19:11866334-11866081 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
149, 41
               

               
Conread position:
               
159-362
               

               
Cow position:
               
chr19:30227494-30227695 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
40, 0
               

               
Conread position:
               
159-386
               

               
Cow position:
               
chr19:8185177-8185408 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
202, 40
               

               
Conread position:
               
159-404
               

               
Cow position:
               
chr19:38410839-38411081 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
6, 38
               

               
Conread position:
               
160-348
               

               
Cow position:
               
chr19:10545729-10545548 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
15, 30
               

               
Conread position:
               
160-382
               

               
Cow position:
               
chr19:12601784-12601993 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
11, 40
               

               
Conread position:
               
161-286
               

               
Cow position:
               
chr19:30551993-30552116 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
126
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
161-361
               

               
Cow position:
               
chr19:33913503-33913701 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
47, 0
               

               
Conread position:
               
161-377
               

               
Cow position:
               
chr19:22872982-22872763 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
28, 112
               

               
Conread position:
               
161-378
               

               
Cow position:
               
chr19:19489856-19489627 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
121, 24
               

               
Conread position:
               
161-378
               

               
Cow position:
               
chr19:29625882-29626092 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
202, 10
               

               
Conread position:
               
161-383
               

               
Cow position:
               
chr19:29368377-29368589 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
213, 10
               

               
Conread position:
               
161-401
               

               
Cow position:
               
chr19:23378652-23378888 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
103, 41
               

               
Conread position:
               
161-408
               

               
Cow position:
               
chr19:21836262-21836022 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
35, 0
               

               
Conread position:
               
162-361
               

               
Cow position:
               
chr19:7595169-7594985 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
16, 28
               

               
Conread position:
               
162-361
               

               
Cow position:
               
chr19:19931109-19931310 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
65, 34
               

               
Conread position:
               
162-371
               

               
Cow position:
               
chr19:20437243-20437448 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
31, 0
               

               
Conread position:
               
162-380
               

               
Cow position:
               
chr19:11646544-11646754 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
205, 28
               

               
Conread position:
               
162-385
               

               
Cow position:
               
chr19:44143957-44143748 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
103, 37
               

               
Conread position:
               
163-378
               

               
Cow position:
               
chr19:24692986-24693191 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
163-387
               

               
Cow position:
               
chr19:518786-519007 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
33, 24
               

               
Conread position:
               
163-390
               

               
Cow position:
               
chr19:18054278-18054058 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
213, 26
               

               
Conread position:
               
164-361
               

               
Cow position:
               
chr19:51637021-51637216 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
10, 19
               

               
Conread position:
               
165-307
               

               
Cow position:
               
chr19:55175501-55175358 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
6, 27
               

               
Conread position:
               
165-381
               

               
Cow position:
               
chr19:6280476-6280682 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
178, 47
               

               
Conread position:
               
165-409
               

               
Cow position:
               
chr19:55160768-55161006 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
31, 0
               

               
Conread position:
               
167-409
               

               
Cow position:
               
chr19:26222591-26222834 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
26, 22
               

               
Conread position:
               
168-381
               

               
Cow position:
               
chr19:25832216-25832010 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
177, 22
               

               
Conread position:
               
168-384
               

               
Cow position:
               
chr19:29627406-29627184 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
125, 15
               

               
Conread position:
               
169-386
               

               
Cow position:
               
chr19:38717364-38717133 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
74, 24
               

               
Conread position:
               
169-387
               

               
Cow position:
               
chr19:37109612-37109408 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
185, 12
               

               
Conread position:
               
170-396
               

               
Cow position:
               
chr19:10574284-10574061 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
98, 29
               

               
Conread position:
               
170-402
               

               
Cow position:
               
chr19:12714083-12714310 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
23, 17
               

               
Conread position:
               
170-411
               

               
Cow position:
               
chr19:3857921-3857687 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
203, 29
               

               
Conread position:
               
171-297
               

               
Cow position:
               
chr19:31998287-31998163 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
127
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
171-371
               

               
Cow position:
               
chr19:36777021-36777220 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
124, 25
               

               
Conread position:
               
173-382
               

               
Cow position:
               
chr19:17964643-17964841 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
173-387
               

               
Cow position:
               
chr19:41946706-41946920 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
70, 11
               

               
Conread position:
               
174-371
               

               
Cow position:
               
chr19:39586117-39585919 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
119, 25
               

               
Conread position:
               
174-381
               

               
Cow position:
               
chr19:14588394-14588601 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
188, 7
               

               
Conread position:
               
174-382
               

               
Cow position:
               
chr19:52356241-52356445 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
199, 25
               

               
Conread position:
               
174-385
               

               
Cow position:
               
chr19:47466189-47466400 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
53, 25
               

               
Conread position:
               
174-389
               

               
Cow position:
               
chr19:46822698-46822910 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
202, 18
               

               
Conread position:
               
175-323
               

               
Cow position:
               
chr19:1897962-1897815 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
100, 24
               

               
Conread position:
               
175-361
               

               
Cow position:
               
chr19:18515675-18515858 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
125, 21
               

               
Conread position:
               
175-378
               

               
Cow position:
               
chr19:31763481-31763683 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
68, 15
               

               
Conread position:
               
175-427
               

               
Cow position:
               
chr19:41343304-41343552 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
11, 90
               

               
Conread position:
               
176-389
               

               
Cow position:
               
chr19:11816732-11816526 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
177-297
               

               
Cow position:
               
chr19:55724411-55724293 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
121
               

               
Alignm identity:
               
94
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
177-306
               

               
Cow position:
               
chr19:38630903-38630776 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
130
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
177-378
               

               
Cow position:
               
chr19:4339649-4339443 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
124, 22
               

               
Conread position:
               
177-387
               

               
Cow position:
               
chr19:39587252-39587058 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
190, 22
               

               
Conread position:
               
177-388
               

               
Cow position:
               
chr19:51621188-51620979 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
195, 22
               

               
Conread position:
               
178-377
               

               
Cow position:
               
chr19:51294290-51294099 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
178-387
               

               
Cow position:
               
chr19:14581356-14581559 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
185, 21
               

               
Conread position:
               
178-403
               

               
Cow position:
               
chr19:15076207-15075973 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
108, 12
               

               
Conread position:
               
179-310
               

               
Cow position:
               
chr19:33931864-33931733 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
134
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
114, 13
               

               
Conread position:
               
179-371
               

               
Cow position:
               
chr19:12202648-12202464 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
183, 8
               

               
Conread position:
               
179-377
               

               
Cow position:
               
chr19:50849833-50850021 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
37, 11
               

               
Conread position:
               
179-390
               

               
Cow position:
               
chr19:11211284-11211076 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
180-361
               

               
Cow position:
               
chr19:25927414-25927239 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
38, 19
               

               
Conread position:
               
181-341
               

               
Cow position:
               
chr19:1553704-1553869 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
120, 21
               

               
Conread position:
               
181-408
               

               
Cow position:
               
chr19:53776577-53776352 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
146, 15
               

               
Conread position:
               
182-349
               

               
Cow position:
               
chr19:18013509-18013345 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
20, 46
               

               
Conread position:
               
182-387
               

               
Cow position:
               
chr19:42776428-42776632 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
190, 8
               

               
Conread position:
               
182-411
               

               
Cow position:
               
chr19:12761106-12760883 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
184-351
               

               
Cow position:
               
chr19:21756909-21756743 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
69, 15
               

               
Conread position:
               
184-406
               

               
Cow position:
               
chr19:7864053-7864276 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
15, 103
               

               
Conread position:
               
187-335
               

               
Cow position:
               
chr19:52568476-52568324 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
7, 0
               

               
Conread position:
               
188-348
               

               
Cow position:
               
chr19:53472566-53472728 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
86, 78
               

               
Conread position:
               
188-387
               

               
Cow position:
               
chr19:2137825-2137633 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
5, 112
               

               
Conread position:
               
189-423
               

               
Cow position:
               
chr19:5493510-5493284 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
6, 66
               

               
Conread position:
               
190-361
               

               
Cow position:
               
chr19:35444504-35444333 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
190-382
               

               
Cow position:
               
chr19:53189853-53189658 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
7, 176
               

               
Conread position:
               
191-352
               

               
Cow position:
               
chr19:54157734-54157573 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
17, 68
               

               
Conread position:
               
191-385
               

               
Cow position:
               
chr19:47363669-47363862 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
100, 148
               

               
Conread position:
               
191-399
               

               
Cow position:
               
chr19:1614777-1614982 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
120, 0
               

               
Conread position:
               
191-428
               

               
Cow position:
               
chr19:41718960-41718727 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
103, 75
               

               
Conread position:
               
192-358
               

               
Cow position:
               
chr19:12945301-12945137 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
135, 0
               

               
Conread position:
               
192-359
               

               
Cow position:
               
chr19:20425363-20425208 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
28, 0
               

               
Conread position:
               
192-361
               

               
Cow position:
               
chr19:5522150-5521987 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
82, 77
               

               
Conread position:
               
192-361
               

               
Cow position:
               
chr19:9573158-9572998 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
94, 0
               

               
Conread position:
               
192-361
               

               
Cow position:
               
chr19:16096549-16096382 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
73, 87
               

               
Conread position:
               
192-361
               

               
Cow position:
               
chr19:29139207-29139376 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
192-375
               

               
Cow position:
               
chr19:36978272-36978460 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
89, 77
               

               
Conread position:
               
192-378
               

               
Cow position:
               
chr19:4586542-4586357 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
51, 58
               

               
Conread position:
               
192-379
               

               
Cow position:
               
chr19:26155283-26155099 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
90, 18
               

               
Conread position:
               
192-385
               

               
Cow position:
               
chr19:5261338-5261539 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
95, 65
               

               
Conread position:
               
192-386
               

               
Cow position:
               
chr19:23559387-23559585 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
63, 78
               

               
Conread position:
               
192-387
               

               
Cow position:
               
chr19:28918416-28918605 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
36, 12
               

               
Conread position:
               
192-394
               

               
Cow position:
               
chr19:39981742-39981946 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
113, 53
               

               
Conread position:
               
193-361
               

               
Cow position:
               
chr19:33307587-33307755 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
193-361
               

               
Cow position:
               
chr19:39698292-39698458 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
92, 0
               

               
Conread position:
               
193-361
               

               
Cow position:
               
chr19:42868021-42868189 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
193-374
               

               
Cow position:
               
chr19:35623400-35623576 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
103, 45
               

               
Conread position:
               
193-383
               

               
Cow position:
               
chr19:6093490-6093666 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
59, 0
               

               
Conread position:
               
193-386
               

               
Cow position:
               
chr19:31729269-31729460 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
168, 0
               

               
Conread position:
               
193-390
               

               
Cow position:
               
chr19:24220494-24220303 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
170, 45
               

               
Conread position:
               
193-393
               

               
Cow position:
               
chr19:41187845-41188040 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
81, 69
               

               
Conread position:
               
193-399
               

               
Cow position:
               
chr19:19738006-19738210 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
170, 0
               

               
Conread position:
               
194-350
               

               
Cow position:
               
chr19:37420795-37420951 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
194-366
               

               
Cow position:
               
chr19:41089613-41089441 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
59, 65
               

               
Conread position:
               
194-382
               

               
Cow position:
               
chr19:7558553-7558738 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
61, 9
               

               
Conread position:
               
194-388
               

               
Cow position:
               
chr19:34420416-34420611 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
168, 97
               

               
Conread position:
               
194-409
               

               
Cow position:
               
chr19:12801540-12801322 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
169, 122
               

               
Conread position:
               
194-413
               

               
Cow position:
               
chr19:1900722-1900504 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
109, 32
               

               
Conread position:
               
196-378
               

               
Cow position:
               
chr19:22167206-22167015 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
90, 17
               

               
Conread position:
               
196-417
               

               
Cow position:
               
chr19:20661406-20661183 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
68, 74
               

               
Conread position:
               
196-430
               

               
Cow position:
               
chr19:17795905-17796149 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
103, 177
               

               
Conread position:
               
197-361
               

               
Cow position:
               
chr19:18984157-18984326 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
40, 73
               

               
Conread position:
               
197-366
               

               
Cow position:
               
chr19:11172833-11173002 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
11, 66
               

               
Conread position:
               
197-382
               

               
Cow position:
               
chr19:46919138-46919329 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
102, 15
               

               
Conread position:
               
197-383
               

               
Cow position:
               
chr19:6021072-6020885 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
175, 166
               

               
Conread position:
               
197-409
               

               
Cow position:
               
chr19:6914750-6914965 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
85, 46
               

               
Conread position:
               
198-361
               

               
Cow position:
               
chr19:54057024-54057185 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
77, 70
               

               
Conread position:
               
198-382
               

               
Cow position:
               
chr19:3109884-3110076 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
33, 40
               

               
Conread position:
               
198-383
               

               
Cow position:
               
chr19:2358083-2358275 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
92, 9
               

               
Conread position:
               
198-389
               

               
Cow position:
               
chr19:52621846-52621650 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
92, 143
               

               
Conread position:
               
198-404
               

               
Cow position:
               
chr19:22871246-22871044 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
10, 74
               

               
Conread position:
               
199-359
               

               
Cow position:
               
chr19:38597082-38597236 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
98, 0
               

               
Conread position:
               
199-388
               

               
Cow position:
               
chr19:16870763-16870578 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
97, 146
               

               
Conread position:
               
199-407
               

               
Cow position:
               
chr19:2793646-2793440 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
164, 60
               

               
Conread position:
               
200-383
               

               
Cow position:
               
chr19:51031571-51031384 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
201-381
               

               
Cow position:
               
chr19:40127152-40126970 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
157, 102
               

               
Conread position:
               
202-374
               

               
Cow position:
               
chr19:13766145-13765959 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
88, 0
               

               
Conread position:
               
202-387
               

               
Cow position:
               
chr19:26269219-26269028 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
89, 165
               

               
Conread position:
               
202-387
               

               
Cow position:
               
chr19:33691146-33691334 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
87, 166
               

               
Conread position:
               
203-389
               

               
Cow position:
               
chr19:7794669-7794850 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
169, 60
               

               
Conread position:
               
205-386
               

               
Cow position:
               
chr19:43896326-43896501 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
53, 58
               

               
Conread position:
               
205-393
               

               
Cow position:
               
chr19:21790751-21790939 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
58, 66
               

               
Conread position:
               
206-382
               

               
Cow position:
               
chr19:15852946-15853118 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
167, 97
               

               
Conread position:
               
206-386
               

               
Cow position:
               
chr19:14596708-14596890 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
77, 51
               

               
Conread position:
               
206-386
               

               
Cow position:
               
chr19:33609908-33610087 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
159, 85
               

               
Conread position:
               
206-409
               

               
Cow position:
               
chr19:17203372-17203576 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
99, 62
               

               
Conread position:
               
208-386
               

               
Cow position:
               
chr19:54102922-54103096 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
5, 0
               

               
Conread position:
               
208-387
               

               
Cow position:
               
chr19:49683843-49683665 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
146, 7
               

               
Conread position:
               
213-378
               

               
Cow position:
               
chr19:42544554-42544717 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
73, 0
               

               
Conread position:
               
213-419
               

               
Cow position:
               
chr19:4602668-4602464 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
157, 72
               

               
Conread position:
               
215-383
               

               
Cow position:
               
chr19:4486122-4485956 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
120, 0
               

               
Conread position:
               
215-387
               

               
Cow position:
               
chr19:30917916-30917747 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
101, 0
               

               
Conread position:
               
215-389
               

               
Cow position:
               
chr19:10172365-10172527 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
77, 0
               

               
Conread position:
               
215-398
               

               
Cow position:
               
chr19:27968668-27968485 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
158, 109
               

               
Conread position:
               
215-407
               

               
Cow position:
               
chr19:35073025-35072835 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
190, 81
               

               
Conread position:
               
216-361
               

               
Cow position:
               
chr19:23416854-23416709 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
216-387
               

               
Cow position:
               
chr19:30385064-30384902 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
88, 0
               

               
Conread position:
               
216-399
               

               
Cow position:
               
chr19:24068255-24068074 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
147, 0
               

               
Conread position:
               
217-397
               

               
Cow position:
               
chr19:22414236-22414060 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
167, 77
               

               
Conread position:
               
219-361
               

               
Cow position:
               
chr19:40650816-40650956 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
8, 0
               

               
Conread position:
               
220-387
               

               
Cow position:
               
chr19:32937895-32938056 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
153, 81
               

               
Conread position:
               
220-388
               

               
Cow position:
               
chr19:6854951-6855119 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
142, 89
               

               
Conread position:
               
223-387
               

               
Cow position:
               
chr19:8603371-8603537 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
71, 143
               

               
Conread position:
               
223-396
               

               
Cow position:
               
chr19:18214167-18213996 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
147, 92
               

               
Conread position:
               
223-403
               

               
Cow position:
               
chr19:19174554-19174732 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
131, 80
               

               
Conread position:
               
223-418
               

               
Cow position:
               
chr19:43292369-43292558 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
225-404
               

               
Cow position:
               
chr19:42217278-42217100 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
68, 93
               

               
Conread position:
               
227-376
               

               
Cow position:
               
chr19:18051123-18050976 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
76, 0
               

               
Conread position:
               
227-401
               

               
Cow position:
               
chr19:31319201-31319367 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
28, 0
               

               
Conread position:
               
227-408
               

               
Cow position:
               
chr19:54105493-54105677 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
143, 136
               

               
Conread position:
               
240-376
               

               
Cow position:
               
chr19:16686931-16686792 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
123, 95
               

               
Conread position:
               
244-383
               

               
Cow position:
               
chr19:49958927-49959062 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
50, 0
               

               
Conread position:
               
244-396
               

               
Cow position:
               
chr19:22838315-22838467 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
26, 35
               

               
Conread position:
               
249-361
               

               
Cow position:
               
chr19:38637725-38637613 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
113
               

               
Alignm identity:
               
89
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
250-387
               

               
Cow position:
               
chr19:48729170-48729031 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
112, 60
               

               
Conread position:
               
255-402
               

               
Cow position:
               
chr19:41863055-41862908 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
38, 49
               
Show alignments to all cow chromosomes.