Non-Coding RNA Search

Cow genome map


           Conread name:
           rche35_a23.y1
        

               Conread position:
               114-381
               

               Cow position:
               chr21:5970834-5970581 (view UCSC Genome Browser custom track)
               

               Alignm length:
               269
               

               Alignm identity:
               181
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               68, 39
               

               Conread position:
               114-385
               

               Cow position:
               chr21:6997944-6998216 (view UCSC Genome Browser custom track)
               

               Alignm length:
               283
               

               Alignm identity:
               208
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               17, 40
               

               Conread position:
               114-411
               

               Cow position:
               chr21:26018384-26018678 (view UCSC Genome Browser custom track)
               

               Alignm length:
               300
               

               Alignm identity:
               206
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               168, 35
               

               Conread position:
               116-356
               

               Cow position:
               chr21:19766862-19767105 (view UCSC Genome Browser custom track)
               

               Alignm length:
               249
               

               Alignm identity:
               171
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               164, 28
               

               Conread position:
               116-388
               

               Cow position:
               chr21:16083110-16082840 (view UCSC Genome Browser custom track)
               

               Alignm length:
               277
               

               Alignm identity:
               181
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               15, 29
               

               Conread position:
               117-361
               

               Cow position:
               chr21:21686427-21686663 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               168
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               163, 27
               

               Conread position:
               119-409
               

               Cow position:
               chr21:38728160-38728450 (view UCSC Genome Browser custom track)
               

               Alignm length:
               295
               

               Alignm identity:
               191
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               5, 82
               

               Conread position:
               121-383
               

               Cow position:
               chr21:17511787-17512043 (view UCSC Genome Browser custom track)
               

               Alignm length:
               269
               

               Alignm identity:
               184
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               107, 78
               

               Conread position:
               122-361
               

               Cow position:
               chr21:20163719-20163953 (view UCSC Genome Browser custom track)
               

               Alignm length:
               241
               

               Alignm identity:
               167
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               20, 69
               

               Conread position:
               122-382
               

               Cow position:
               chr21:17252967-17252712 (view UCSC Genome Browser custom track)
               

               Alignm length:
               262
               

               Alignm identity:
               176
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               20, 69
               

               Conread position:
               123-361
               

               Cow position:
               chr21:41107761-41107530 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               176
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               14, 73
               

               Conread position:
               123-383
               

               Cow position:
               chr21:8950195-8950462 (view UCSC Genome Browser custom track)
               

               Alignm length:
               269
               

               Alignm identity:
               187
               

               Alignm E-value:
               8e-33
               

               Alignm gaps (pig, cow):
               31, 148
               

               Conread position:
               124-297
               

               Cow position:
               chr21:14228266-14228095 (view UCSC Genome Browser custom track)
               

               Alignm length:
               174
               

               Alignm identity:
               121
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               66, 0
               

               Conread position:
               124-394
               

               Cow position:
               chr21:9418142-9417861 (view UCSC Genome Browser custom track)
               

               Alignm length:
               287
               

               Alignm identity:
               194
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               16, 65
               

               Conread position:
               125-407
               

               Cow position:
               chr21:40266142-40266415 (view UCSC Genome Browser custom track)
               

               Alignm length:
               285
               

               Alignm identity:
               205
               

               Alignm E-value:
               6e-40
               

               Alignm gaps (pig, cow):
               152, 19
               

               Conread position:
               126-291
               

               Cow position:
               chr21:1591570-1591726 (view UCSC Genome Browser custom track)
               

               Alignm length:
               166
               

               Alignm identity:
               124
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               73, 0
               

               Conread position:
               126-312
               

               Cow position:
               chr21:24642538-24642710 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               143
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               27, 0
               

               Conread position:
               126-331
               

               Cow position:
               chr21:42007445-42007243 (view UCSC Genome Browser custom track)
               

               Alignm length:
               206
               

               Alignm identity:
               150
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               59, 0
               

               Conread position:
               126-361
               

               Cow position:
               chr21:8351296-8351048 (view UCSC Genome Browser custom track)
               

               Alignm length:
               253
               

               Alignm identity:
               184
               

               Alignm E-value:
               8e-33
               

               Alignm gaps (pig, cow):
               15, 192
               

               Conread position:
               126-376
               

               Cow position:
               chr21:47363720-47363459 (view UCSC Genome Browser custom track)
               

               Alignm length:
               265
               

               Alignm identity:
               194
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               16, 28
               

               Conread position:
               126-378
               

               Cow position:
               chr21:38449429-38449185 (view UCSC Genome Browser custom track)
               

               Alignm length:
               258
               

               Alignm identity:
               188
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               138, 73
               

               Conread position:
               126-382
               

               Cow position:
               chr21:18059944-18059691 (view UCSC Genome Browser custom track)
               

               Alignm length:
               258
               

               Alignm identity:
               172
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               236, 27
               

               Conread position:
               126-387
               

               Cow position:
               chr21:47713987-47713736 (view UCSC Genome Browser custom track)
               

               Alignm length:
               263
               

               Alignm identity:
               193
               

               Alignm E-value:
               6e-40
               

               Alignm gaps (pig, cow):
               188, 27
               

               Conread position:
               126-388
               

               Cow position:
               chr21:10004869-10004613 (view UCSC Genome Browser custom track)
               

               Alignm length:
               263
               

               Alignm identity:
               198
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               73, 0
               

               Conread position:
               126-389
               

               Cow position:
               chr21:16152454-16152712 (view UCSC Genome Browser custom track)
               

               Alignm length:
               266
               

               Alignm identity:
               188
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               13, 72
               

               Conread position:
               126-397
               

               Cow position:
               chr21:868908-868637 (view UCSC Genome Browser custom track)
               

               Alignm length:
               275
               

               Alignm identity:
               207
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               167, 73
               

               Conread position:
               126-407
               

               Cow position:
               chr21:30256252-30255963 (view UCSC Genome Browser custom track)
               

               Alignm length:
               295
               

               Alignm identity:
               208
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               39, 27
               

               Conread position:
               127-308
               

               Cow position:
               chr21:36795620-36795799 (view UCSC Genome Browser custom track)
               

               Alignm length:
               182
               

               Alignm identity:
               134
               

               Alignm E-value:
               6e-30
               

               Alignm gaps (pig, cow):
               60, 0
               

               Conread position:
               127-321
               

               Cow position:
               chr21:15911420-15911608 (view UCSC Genome Browser custom track)
               

               Alignm length:
               195
               

               Alignm identity:
               138
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               62, 0
               

               Conread position:
               127-361
               

               Cow position:
               chr21:30231676-30231450 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               180
               

               Alignm E-value:
               8.96831e-44
               

               Alignm gaps (pig, cow):
               26, 0
               

               Conread position:
               127-386
               

               Cow position:
               chr21:30835383-30835642 (view UCSC Genome Browser custom track)
               

               Alignm length:
               265
               

               Alignm identity:
               194
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               234, 62
               

               Conread position:
               127-389
               

               Cow position:
               chr21:42841580-42841313 (view UCSC Genome Browser custom track)
               

               Alignm length:
               272
               

               Alignm identity:
               194
               

               Alignm E-value:
               4e-37
               

               Alignm gaps (pig, cow):
               159, 72
               

               Conread position:
               128-286
               

               Cow position:
               chr21:7823380-7823538 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               128
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               38, 25
               

               Conread position:
               128-388
               

               Cow position:
               chr21:20318534-20318788 (view UCSC Genome Browser custom track)
               

               Alignm length:
               267
               

               Alignm identity:
               187
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               184, 21
               

               Conread position:
               128-396
               

               Cow position:
               chr21:44074709-44074975 (view UCSC Genome Browser custom track)
               

               Alignm length:
               274
               

               Alignm identity:
               180
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               20, 27
               

               Conread position:
               129-297
               

               Cow position:
               chr21:1059099-1059261 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               129
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               13, 25
               

               Conread position:
               129-379
               

               Cow position:
               chr21:13842509-13842756 (view UCSC Genome Browser custom track)
               

               Alignm length:
               252
               

               Alignm identity:
               168
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               149, 25
               

               Conread position:
               129-379
               

               Cow position:
               chr21:28030309-28030542 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               184
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               29, 0
               

               Conread position:
               129-387
               

               Cow position:
               chr21:957693-957940 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               194
               

               Alignm E-value:
               8.00141e-43
               

               Alignm gaps (pig, cow):
               24, 0
               

               Conread position:
               129-387
               

               Cow position:
               chr21:21907408-21907171 (view UCSC Genome Browser custom track)
               

               Alignm length:
               260
               

               Alignm identity:
               180
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               228, 24
               

               Conread position:
               129-387
               

               Cow position:
               chr21:34010376-34010120 (view UCSC Genome Browser custom track)
               

               Alignm length:
               264
               

               Alignm identity:
               183
               

               Alignm E-value:
               6e-30
               

               Alignm gaps (pig, cow):
               13, 43
               

               Conread position:
               129-426
               

               Cow position:
               chr21:37299479-37299770 (view UCSC Genome Browser custom track)
               

               Alignm length:
               301
               

               Alignm identity:
               196
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               15, 63
               

               Conread position:
               130-261
               

               Cow position:
               chr21:34390954-34390826 (view UCSC Genome Browser custom track)
               

               Alignm length:
               132
               

               Alignm identity:
               103
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               23, 0
               

               Conread position:
               130-297
               

               Cow position:
               chr21:23322057-23321893 (view UCSC Genome Browser custom track)
               

               Alignm length:
               168
               

               Alignm identity:
               126
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               24, 0
               

               Conread position:
               130-303
               

               Cow position:
               chr21:30607068-30606905 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               136
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               24, 70
               

               Conread position:
               130-322
               

               Cow position:
               chr21:42463668-42463483 (view UCSC Genome Browser custom track)
               

               Alignm length:
               195
               

               Alignm identity:
               141
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               135, 69
               

               Conread position:
               130-331
               

               Cow position:
               chr21:38121120-38121320 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               140
               

               Alignm E-value:
               9e-23
               

               Alignm gaps (pig, cow):
               11, 73
               

               Conread position:
               130-341
               

               Cow position:
               chr21:17642963-17642763 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               159
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               23, 0
               

               Conread position:
               130-360
               

               Cow position:
               chr21:10264053-10264280 (view UCSC Genome Browser custom track)
               

               Alignm length:
               232
               

               Alignm identity:
               177
               

               Alignm E-value:
               2.8026e-45
               

               Alignm gaps (pig, cow):
               145, 69
               

               Conread position:
               130-375
               

               Cow position:
               chr21:3585347-3585100 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               195
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               175, 23
               

               Conread position:
               130-380
               

               Cow position:
               chr21:28907523-28907285 (view UCSC Genome Browser custom track)
               

               Alignm length:
               252
               

               Alignm identity:
               179
               

               Alignm E-value:
               6e-30
               

               Alignm gaps (pig, cow):
               115, 28
               

               Conread position:
               130-386
               

               Cow position:
               chr21:9416269-9416516 (view UCSC Genome Browser custom track)
               

               Alignm length:
               260
               

               Alignm identity:
               194
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               21, 70
               

               Conread position:
               130-387
               

               Cow position:
               chr21:7394403-7394641 (view UCSC Genome Browser custom track)
               

               Alignm length:
               260
               

               Alignm identity:
               180
               

               Alignm E-value:
               9e-23
               

               Alignm gaps (pig, cow):
               21, 61
               

               Conread position:
               130-387
               

               Cow position:
               chr21:15584399-15584149 (view UCSC Genome Browser custom track)
               

               Alignm length:
               261
               

               Alignm identity:
               184
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               144, 69
               

               Conread position:
               130-387
               

               Cow position:
               chr21:43388372-43388634 (view UCSC Genome Browser custom track)
               

               Alignm length:
               266
               

               Alignm identity:
               178
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               21, 13
               

               Conread position:
               130-389
               

               Cow position:
               chr21:6713505-6713246 (view UCSC Genome Browser custom track)
               

               Alignm length:
               265
               

               Alignm identity:
               200
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               27, 14
               

               Conread position:
               130-390
               

               Cow position:
               chr21:9036320-9036582 (view UCSC Genome Browser custom track)
               

               Alignm length:
               268
               

               Alignm identity:
               178
               

               Alignm E-value:
               9e-23
               

               Alignm gaps (pig, cow):
               13, 67
               

               Conread position:
               130-391
               

               Cow position:
               chr21:10817051-10817315 (view UCSC Genome Browser custom track)
               

               Alignm length:
               269
               

               Alignm identity:
               188
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               15, 32
               

               Conread position:
               130-399
               

               Cow position:
               chr21:46849105-46848851 (view UCSC Genome Browser custom track)
               

               Alignm length:
               270
               

               Alignm identity:
               185
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               22, 0
               

               Conread position:
               130-401
               

               Cow position:
               chr21:1511313-1511572 (view UCSC Genome Browser custom track)
               

               Alignm length:
               272
               

               Alignm identity:
               195
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               69, 0
               

               Conread position:
               130-401
               

               Cow position:
               chr21:16793810-16794085 (view UCSC Genome Browser custom track)
               

               Alignm length:
               283
               

               Alignm identity:
               200
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               45, 28
               

               Conread position:
               130-401
               

               Cow position:
               chr21:41974353-41974078 (view UCSC Genome Browser custom track)
               

               Alignm length:
               285
               

               Alignm identity:
               206
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               64, 23
               

               Conread position:
               131-387
               

               Cow position:
               chr21:46132596-46132868 (view UCSC Genome Browser custom track)
               

               Alignm length:
               277
               

               Alignm identity:
               200
               

               Alignm E-value:
               9e-34
               

               Alignm gaps (pig, cow):
               132, 23
               

               Conread position:
               132-390
               

               Cow position:
               chr21:14464602-14464867 (view UCSC Genome Browser custom track)
               

               Alignm length:
               269
               

               Alignm identity:
               192
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               19, 11
               

               Conread position:
               133-306
               

               Cow position:
               chr21:41046830-41047001 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               123
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               167, 57
               

               Conread position:
               133-308
               

               Cow position:
               chr21:2657830-2658005 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               132
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               18, 65
               

               Conread position:
               133-311
               

               Cow position:
               chr21:30119718-30119893 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               134
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               160, 20
               

               Conread position:
               133-330
               

               Cow position:
               chr21:712965-713161 (view UCSC Genome Browser custom track)
               

               Alignm length:
               199
               

               Alignm identity:
               138
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               94, 58
               

               Conread position:
               133-331
               

               Cow position:
               chr21:9990534-9990727 (view UCSC Genome Browser custom track)
               

               Alignm length:
               199
               

               Alignm identity:
               139
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               28, 0
               

               Conread position:
               133-353
               

               Cow position:
               chr21:6624181-6624397 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               154
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               20, 0
               

               Conread position:
               133-361
               

               Cow position:
               chr21:19561546-19561318 (view UCSC Genome Browser custom track)
               

               Alignm length:
               232
               

               Alignm identity:
               155
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               14, 64
               

               Conread position:
               133-374
               

               Cow position:
               chr21:42135595-42135361 (view UCSC Genome Browser custom track)
               

               Alignm length:
               244
               

               Alignm identity:
               175
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               27, 59
               

               Conread position:
               133-378
               

               Cow position:
               chr21:17983003-17983234 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               177
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               55, 0
               

               Conread position:
               133-378
               

               Cow position:
               chr21:23535734-23535975 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               181
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               142, 41
               

               Conread position:
               133-378
               

               Cow position:
               chr21:29069304-29069061 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               171
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               75, 0
               

               Conread position:
               133-378
               

               Cow position:
               chr21:36763087-36763329 (view UCSC Genome Browser custom track)
               

               Alignm length:
               250
               

               Alignm identity:
               191
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               230, 10
               

               Conread position:
               133-379
               

               Cow position:
               chr21:22718761-22718520 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               179
               

               Alignm E-value:
               4e-37
               

               Alignm gaps (pig, cow):
               18, 57
               

               Conread position:
               133-380
               

               Cow position:
               chr21:47719276-47719040 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               170
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               70, 0
               

               Conread position:
               133-383
               

               Cow position:
               chr21:41590542-41590298 (view UCSC Genome Browser custom track)
               

               Alignm length:
               252
               

               Alignm identity:
               173
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               240, 57
               

               Conread position:
               133-386
               

               Cow position:
               chr21:8426469-8426714 (view UCSC Genome Browser custom track)
               

               Alignm length:
               256
               

               Alignm identity:
               179
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               211, 55
               

               Conread position:
               133-387
               

               Cow position:
               chr21:14027086-14027340 (view UCSC Genome Browser custom track)
               

               Alignm length:
               261
               

               Alignm identity:
               175
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               149, 21
               

               Conread position:
               133-387
               

               Cow position:
               chr21:30222366-30222617 (view UCSC Genome Browser custom track)
               

               Alignm length:
               261
               

               Alignm identity:
               184
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               10, 57
               

               Conread position:
               133-387
               

               Cow position:
               chr21:30980556-30980283 (view UCSC Genome Browser custom track)
               

               Alignm length:
               277
               

               Alignm identity:
               191
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               7, 71
               

               Conread position:
               133-387
               

               Cow position:
               chr21:44251822-44251571 (view UCSC Genome Browser custom track)
               

               Alignm length:
               258
               

               Alignm identity:
               188
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               19, 65
               

               Conread position:
               133-389
               

               Cow position:
               chr21:24858336-24858589 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               174
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               14, 59
               

               Conread position:
               133-394
               

               Cow position:
               chr21:10657079-10656821 (view UCSC Genome Browser custom track)
               

               Alignm length:
               267
               

               Alignm identity:
               183
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               53, 20
               

               Conread position:
               133-394
               

               Cow position:
               chr21:39319386-39319126 (view UCSC Genome Browser custom track)
               

               Alignm length:
               264
               

               Alignm identity:
               181
               

               Alignm E-value:
               8e-33
               

               Alignm gaps (pig, cow):
               222, 20
               

               Conread position:
               133-403
               

               Cow position:
               chr21:742310-742561 (view UCSC Genome Browser custom track)
               

               Alignm length:
               272
               

               Alignm identity:
               193
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               240, 56
               

               Conread position:
               133-404
               

               Cow position:
               chr21:45906598-45906333 (view UCSC Genome Browser custom track)
               

               Alignm length:
               274
               

               Alignm identity:
               180
               

               Alignm E-value:
               9e-23
               

               Alignm gaps (pig, cow):
               88, 20
               

               Conread position:
               133-411
               

               Cow position:
               chr21:34654098-34654366 (view UCSC Genome Browser custom track)
               

               Alignm length:
               281
               

               Alignm identity:
               194
               

               Alignm E-value:
               7e-31
               

               Alignm gaps (pig, cow):
               240, 16
               

               Conread position:
               133-432
               

               Cow position:
               chr21:33982783-33982496 (view UCSC Genome Browser custom track)
               

               Alignm length:
               303
               

               Alignm identity:
               208
               

               Alignm E-value:
               7e-31
               

               Alignm gaps (pig, cow):
               243, 20
               

               Conread position:
               134-303
               

               Cow position:
               chr21:45921034-45920869 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               128
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               9, 20
               

               Conread position:
               134-312
               

               Cow position:
               chr21:46470212-46470383 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               132
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               15, 0
               

               Conread position:
               134-361
               

               Cow position:
               chr21:44829734-44829510 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               166
               

               Alignm E-value:
               5e-38
               

               Alignm gaps (pig, cow):
               15, 0
               

               Conread position:
               134-380
               

               Cow position:
               chr21:10072182-10072430 (view UCSC Genome Browser custom track)
               

               Alignm length:
               253
               

               Alignm identity:
               170
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               45, 19
               

               Conread position:
               134-385
               

               Cow position:
               chr21:26563136-26562886 (view UCSC Genome Browser custom track)
               

               Alignm length:
               260
               

               Alignm identity:
               177
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               14, 20
               

               Conread position:
               134-387
               

               Cow position:
               chr21:9311071-9311328 (view UCSC Genome Browser custom track)
               

               Alignm length:
               260
               

               Alignm identity:
               176
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               54, 19
               

               Conread position:
               134-388
               

               Cow position:
               chr21:32339713-32339473 (view UCSC Genome Browser custom track)
               

               Alignm length:
               255
               

               Alignm identity:
               197
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               21, 0
               

               Conread position:
               134-415
               

               Cow position:
               chr21:42144851-42145126 (view UCSC Genome Browser custom track)
               

               Alignm length:
               290
               

               Alignm identity:
               211
               

               Alignm E-value:
               4e-37
               

               Alignm gaps (pig, cow):
               229, 19
               

               Conread position:
               134-427
               

               Cow position:
               chr21:8713936-8713642 (view UCSC Genome Browser custom track)
               

               Alignm length:
               299
               

               Alignm identity:
               204
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               17, 28
               

               Conread position:
               135-318
               

               Cow position:
               chr21:40168602-40168420 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               135
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               15, 63
               

               Conread position:
               135-361
               

               Cow position:
               chr21:48637734-48637509 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               163
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               7, 54
               

               Conread position:
               135-385
               

               Cow position:
               chr21:29978736-29978491 (view UCSC Genome Browser custom track)
               

               Alignm length:
               255
               

               Alignm identity:
               180
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               16, 65
               

               Conread position:
               135-401
               

               Cow position:
               chr21:44724343-44724087 (view UCSC Genome Browser custom track)
               

               Alignm length:
               271
               

               Alignm identity:
               199
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               227, 64
               

               Conread position:
               135-408
               

               Cow position:
               chr21:19702757-19703027 (view UCSC Genome Browser custom track)
               

               Alignm length:
               283
               

               Alignm identity:
               198
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               40, 18
               

               Conread position:
               135-409
               

               Cow position:
               chr21:27569144-27568861 (view UCSC Genome Browser custom track)
               

               Alignm length:
               290
               

               Alignm identity:
               196
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               160, 55
               

               Conread position:
               136-358
               

               Cow position:
               chr21:41579783-41579998 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               162
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               17, 0
               

               Conread position:
               136-361
               

               Cow position:
               chr21:37706389-37706166 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               170
               

               Alignm E-value:
               8.96831e-44
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               136-361
               

               Cow position:
               chr21:46809744-46809518 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               171
               

               Alignm E-value:
               6e-40
               

               Alignm gaps (pig, cow):
               39, 17
               

               Conread position:
               136-386
               

               Cow position:
               chr21:40475526-40475777 (view UCSC Genome Browser custom track)
               

               Alignm length:
               256
               

               Alignm identity:
               190
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               222, 18
               

               Conread position:
               136-387
               

               Cow position:
               chr21:36682351-36682598 (view UCSC Genome Browser custom track)
               

               Alignm length:
               254
               

               Alignm identity:
               178
               

               Alignm E-value:
               8e-32
               

               Alignm gaps (pig, cow):
               197, 54
               

               Conread position:
               136-409
               

               Cow position:
               chr21:45835378-45835094 (view UCSC Genome Browser custom track)
               

               Alignm length:
               286
               

               Alignm identity:
               192
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               11, 138
               

               Conread position:
               136-423
               

               Cow position:
               chr21:31760186-31759922 (view UCSC Genome Browser custom track)
               

               Alignm length:
               289
               

               Alignm identity:
               196
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               127, 17
               

               Conread position:
               137-297
               

               Cow position:
               chr21:18800512-18800349 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               117
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               57, 0
               

               Conread position:
               137-312
               

               Cow position:
               chr21:26244941-26245114 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               136
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               61, 0
               

               Conread position:
               137-361
               

               Cow position:
               chr21:8924393-8924617 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               155
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               39, 11
               

               Conread position:
               137-361
               

               Cow position:
               chr21:23568251-23568471 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               165
               

               Alignm E-value:
               6e-30
               

               Alignm gaps (pig, cow):
               6, 17
               

               Conread position:
               137-361
               

               Cow position:
               chr21:30592277-30592068 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               159
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               52, 0
               

               Conread position:
               137-387
               

               Cow position:
               chr21:938050-938294 (view UCSC Genome Browser custom track)
               

               Alignm length:
               253
               

               Alignm identity:
               178
               

               Alignm E-value:
               7e-31
               

               Alignm gaps (pig, cow):
               144, 12
               

               Conread position:
               137-404
               

               Cow position:
               chr21:43692843-43693104 (view UCSC Genome Browser custom track)
               

               Alignm length:
               274
               

               Alignm identity:
               182
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               91, 59
               

               Conread position:
               137-419
               

               Cow position:
               chr21:32559339-32559070 (view UCSC Genome Browser custom track)
               

               Alignm length:
               285
               

               Alignm identity:
               194
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               10, 54
               

               Conread position:
               138-287
               

               Cow position:
               chr21:42414069-42413922 (view UCSC Genome Browser custom track)
               

               Alignm length:
               150
               

               Alignm identity:
               113
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               15, 0
               

               Conread position:
               138-311
               

               Cow position:
               chr21:44592182-44592009 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               132
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               13, 62
               

               Conread position:
               138-359
               

               Cow position:
               chr21:25344889-25345108 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               167
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               99, 58
               

               Conread position:
               138-376
               

               Cow position:
               chr21:7768467-7768691 (view UCSC Genome Browser custom track)
               

               Alignm length:
               239
               

               Alignm identity:
               179
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               15, 0
               

               Conread position:
               139-312
               

               Cow position:
               chr21:18790533-18790368 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               127
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               12, 38
               

               Conread position:
               139-312
               

               Cow position:
               chr21:30157775-30157606 (view UCSC Genome Browser custom track)
               

               Alignm length:
               174
               

               Alignm identity:
               131
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               10, 0
               

               Conread position:
               139-361
               

               Cow position:
               chr21:24266536-24266315 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               172
               

               Alignm E-value:
               5.99994e-41
               

               Alignm gaps (pig, cow):
               24, 19
               

               Conread position:
               139-361
               

               Cow position:
               chr21:34151614-34151822 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               168
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               10, 60
               

               Conread position:
               139-377
               

               Cow position:
               chr21:28733883-28733646 (view UCSC Genome Browser custom track)
               

               Alignm length:
               242
               

               Alignm identity:
               170
               

               Alignm E-value:
               8e-32
               

               Alignm gaps (pig, cow):
               218, 49
               

               Conread position:
               139-382
               

               Cow position:
               chr21:11740090-11739854 (view UCSC Genome Browser custom track)
               

               Alignm length:
               244
               

               Alignm identity:
               171
               

               Alignm E-value:
               8e-32
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               139-384
               

               Cow position:
               chr21:13585030-13584784 (view UCSC Genome Browser custom track)
               

               Alignm length:
               252
               

               Alignm identity:
               184
               

               Alignm E-value:
               5e-38
               

               Alignm gaps (pig, cow):
               141, 47
               

               Conread position:
               139-387
               

               Cow position:
               chr21:71617-71858 (view UCSC Genome Browser custom track)
               

               Alignm length:
               250
               

               Alignm identity:
               180
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               228, 14
               

               Conread position:
               139-387
               

               Cow position:
               chr21:10978918-10978676 (view UCSC Genome Browser custom track)
               

               Alignm length:
               250
               

               Alignm identity:
               164
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               158, 15
               

               Conread position:
               139-387
               

               Cow position:
               chr21:37838037-37837802 (view UCSC Genome Browser custom track)
               

               Alignm length:
               253
               

               Alignm identity:
               183
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               222, 57
               

               Conread position:
               139-387
               

               Cow position:
               chr21:38900801-38901039 (view UCSC Genome Browser custom track)
               

               Alignm length:
               255
               

               Alignm identity:
               194
               

               Alignm E-value:
               6e-40
               

               Alignm gaps (pig, cow):
               11, 62
               

               Conread position:
               139-387
               

               Cow position:
               chr21:44825860-44825603 (view UCSC Genome Browser custom track)
               

               Alignm length:
               261
               

               Alignm identity:
               177
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               63, 83
               

               Conread position:
               139-388
               

               Cow position:
               chr21:10673150-10673386 (view UCSC Genome Browser custom track)
               

               Alignm length:
               255
               

               Alignm identity:
               180
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               139, 52
               

               Conread position:
               139-389
               

               Cow position:
               chr21:14452264-14452511 (view UCSC Genome Browser custom track)
               

               Alignm length:
               255
               

               Alignm identity:
               181
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               224, 14
               

               Conread position:
               139-409
               

               Cow position:
               chr21:24343238-24342971 (view UCSC Genome Browser custom track)
               

               Alignm length:
               272
               

               Alignm identity:
               177
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               256, 57
               

               Conread position:
               139-422
               

               Cow position:
               chr21:13588794-13589074 (view UCSC Genome Browser custom track)
               

               Alignm length:
               290
               

               Alignm identity:
               206
               

               Alignm E-value:
               4e-37
               

               Alignm gaps (pig, cow):
               114, 14
               

               Conread position:
               140-294
               

               Cow position:
               chr21:13365373-13365524 (view UCSC Genome Browser custom track)
               

               Alignm length:
               155
               

               Alignm identity:
               118
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               59, 0
               

               Conread position:
               140-313
               

               Cow position:
               chr21:11057848-11057680 (view UCSC Genome Browser custom track)
               

               Alignm length:
               174
               

               Alignm identity:
               122
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               68, 0
               

               Conread position:
               140-361
               

               Cow position:
               chr21:18493342-18493120 (view UCSC Genome Browser custom track)
               

               Alignm length:
               230
               

               Alignm identity:
               157
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               41, 133
               

               Conread position:
               140-361
               

               Cow position:
               chr21:41287762-41287550 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               162
               

               Alignm E-value:
               9e-34
               

               Alignm gaps (pig, cow):
               13, 0
               

               Conread position:
               140-379
               

               Cow position:
               chr21:11644936-11644703 (view UCSC Genome Browser custom track)
               

               Alignm length:
               240
               

               Alignm identity:
               170
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               50, 0
               

               Conread position:
               140-379
               

               Cow position:
               chr21:23586911-23587140 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               184
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               14, 60
               

               Conread position:
               140-383
               

               Cow position:
               chr21:643356-643591 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               175
               

               Alignm E-value:
               8e-33
               

               Alignm gaps (pig, cow):
               214, 13
               

               Conread position:
               140-387
               

               Cow position:
               chr21:15545337-15545089 (view UCSC Genome Browser custom track)
               

               Alignm length:
               256
               

               Alignm identity:
               173
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               44, 107
               

               Conread position:
               140-389
               

               Cow position:
               chr21:27677514-27677762 (view UCSC Genome Browser custom track)
               

               Alignm length:
               255
               

               Alignm identity:
               193
               

               Alignm E-value:
               2.8026e-45
               

               Alignm gaps (pig, cow):
               221, 9
               

               Conread position:
               140-399
               

               Cow position:
               chr21:17637922-17638184 (view UCSC Genome Browser custom track)
               

               Alignm length:
               265
               

               Alignm identity:
               174
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               222, 56
               

               Conread position:
               140-399
               

               Cow position:
               chr21:19060061-19059805 (view UCSC Genome Browser custom track)
               

               Alignm length:
               266
               

               Alignm identity:
               180
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               14, 42
               

               Conread position:
               140-407
               

               Cow position:
               chr21:32393027-32392769 (view UCSC Genome Browser custom track)
               

               Alignm length:
               272
               

               Alignm identity:
               193
               

               Alignm E-value:
               9e-34
               

               Alignm gaps (pig, cow):
               150, 59
               

               Conread position:
               140-419
               

               Cow position:
               chr21:29014879-29014614 (view UCSC Genome Browser custom track)
               

               Alignm length:
               282
               

               Alignm identity:
               194
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               238, 13
               

               Conread position:
               140-421
               

               Cow position:
               chr21:12310508-12310777 (view UCSC Genome Browser custom track)
               

               Alignm length:
               283
               

               Alignm identity:
               193
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               227, 9
               

               Conread position:
               141-278
               

               Cow position:
               chr21:23460170-23460299 (view UCSC Genome Browser custom track)
               

               Alignm length:
               138
               

               Alignm identity:
               107
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               11, 0
               

               Conread position:
               141-359
               

               Cow position:
               chr21:42562662-42562893 (view UCSC Genome Browser custom track)
               

               Alignm length:
               239
               

               Alignm identity:
               177
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               13, 36
               

               Conread position:
               141-378
               

               Cow position:
               chr21:17890333-17890565 (view UCSC Genome Browser custom track)
               

               Alignm length:
               238
               

               Alignm identity:
               170
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               58, 0
               

               Conread position:
               141-382
               

               Cow position:
               chr21:16498550-16498782 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               170
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               232, 49
               

               Conread position:
               141-382
               

               Cow position:
               chr21:18155534-18155293 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               164
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               220, 12
               

               Conread position:
               141-383
               

               Cow position:
               chr21:41621157-41621396 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               184
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               116, 12
               

               Conread position:
               141-387
               

               Cow position:
               chr21:31279288-31279527 (view UCSC Genome Browser custom track)
               

               Alignm length:
               250
               

               Alignm identity:
               185
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               232, 12
               

               Conread position:
               141-404
               

               Cow position:
               chr21:31253568-31253820 (view UCSC Genome Browser custom track)
               

               Alignm length:
               265
               

               Alignm identity:
               186
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               188, 46
               

               Conread position:
               142-286
               

               Cow position:
               chr21:37345067-37344927 (view UCSC Genome Browser custom track)
               

               Alignm length:
               145
               

               Alignm identity:
               113
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               29, 0
               

               Conread position:
               142-306
               

               Cow position:
               chr21:45473726-45473564 (view UCSC Genome Browser custom track)
               

               Alignm length:
               166
               

               Alignm identity:
               126
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               149, 57
               

               Conread position:
               142-383
               

               Cow position:
               chr21:39888717-39888454 (view UCSC Genome Browser custom track)
               

               Alignm length:
               264
               

               Alignm identity:
               183
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               77, 0
               

               Conread position:
               142-385
               

               Cow position:
               chr21:27521300-27521067 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               184
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               216, 26
               

               Conread position:
               142-387
               

               Cow position:
               chr21:47760802-47761041 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               167
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               11, 0
               

               Conread position:
               142-402
               

               Cow position:
               chr21:8545986-8545734 (view UCSC Genome Browser custom track)
               

               Alignm length:
               261
               

               Alignm identity:
               184
               

               Alignm E-value:
               4e-37
               

               Alignm gaps (pig, cow):
               47, 0
               

               Conread position:
               143-333
               

               Cow position:
               chr21:21169459-21169275 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               141
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               47, 0
               

               Conread position:
               143-368
               

               Cow position:
               chr21:7066348-7066133 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               164
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               139, 53
               

               Conread position:
               143-371
               

               Cow position:
               chr21:22121544-22121757 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               167
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               10, 0
               

               Conread position:
               143-385
               

               Cow position:
               chr21:12461933-12461695 (view UCSC Genome Browser custom track)
               

               Alignm length:
               249
               

               Alignm identity:
               183
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               100, 10
               

               Conread position:
               143-399
               

               Cow position:
               chr21:23672781-23673027 (view UCSC Genome Browser custom track)
               

               Alignm length:
               258
               

               Alignm identity:
               181
               

               Alignm E-value:
               7e-31
               

               Alignm gaps (pig, cow):
               11, 56
               

               Conread position:
               143-409
               

               Cow position:
               chr21:9301251-9301522 (view UCSC Genome Browser custom track)
               

               Alignm length:
               275
               

               Alignm identity:
               183
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               45, 10
               

               Conread position:
               143-428
               

               Cow position:
               chr21:47465084-47464809 (view UCSC Genome Browser custom track)
               

               Alignm length:
               287
               

               Alignm identity:
               200
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               265, 10
               

               Conread position:
               144-280
               

               Cow position:
               chr21:42209594-42209461 (view UCSC Genome Browser custom track)
               

               Alignm length:
               137
               

               Alignm identity:
               104
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               10, 0
               

               Conread position:
               144-289
               

               Cow position:
               chr21:734628-734766 (view UCSC Genome Browser custom track)
               

               Alignm length:
               146
               

               Alignm identity:
               110
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               41, 0
               

               Conread position:
               144-293
               

               Cow position:
               chr21:3818244-3818389 (view UCSC Genome Browser custom track)
               

               Alignm length:
               150
               

               Alignm identity:
               114
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               10, 0
               

               Conread position:
               144-293
               

               Cow position:
               chr21:10001109-10001256 (view UCSC Genome Browser custom track)
               

               Alignm length:
               150
               

               Alignm identity:
               110
               

               Alignm E-value:
               9e-23
               

               Alignm gaps (pig, cow):
               53, 0
               

               Conread position:
               144-294
               

               Cow position:
               chr21:395903-396049 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               119
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               9, 0
               

               Conread position:
               144-296
               

               Cow position:
               chr21:7583884-7584034 (view UCSC Genome Browser custom track)
               

               Alignm length:
               155
               

               Alignm identity:
               119
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               107, 44
               

               Conread position:
               144-297
               

               Cow position:
               chr21:41597846-41597996 (view UCSC Genome Browser custom track)
               

               Alignm length:
               154
               

               Alignm identity:
               118
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               9, 0
               

               Conread position:
               144-312
               

               Cow position:
               chr21:42384543-42384709 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               128
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               141, 9
               

               Conread position:
               144-322
               

               Cow position:
               chr21:31159437-31159605 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               137
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               104, 9
               

               Conread position:
               144-341
               

               Cow position:
               chr21:19258857-19259042 (view UCSC Genome Browser custom track)
               

               Alignm length:
               198
               

               Alignm identity:
               147
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               9, 0
               

               Conread position:
               144-354
               

               Cow position:
               chr21:7377891-7377684 (view UCSC Genome Browser custom track)
               

               Alignm length:
               211
               

               Alignm identity:
               155
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               10, 0
               

               Conread position:
               144-358
               

               Cow position:
               chr21:11625778-11625989 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               142
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               9, 0
               

               Conread position:
               144-359
               

               Cow position:
               chr21:20165674-20165884 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               154
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               8, 54
               

               Conread position:
               144-360
               

               Cow position:
               chr21:41198365-41198152 (view UCSC Genome Browser custom track)
               

               Alignm length:
               217
               

               Alignm identity:
               146
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               47, 0
               

               Conread position:
               144-361
               

               Cow position:
               chr21:47074-47293 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               166
               

               Alignm E-value:
               5e-39
               

               Alignm gaps (pig, cow):
               155, 58
               

               Conread position:
               144-361
               

               Cow position:
               chr21:28919488-28919285 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               165
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               9, 0
               

               Conread position:
               144-361
               

               Cow position:
               chr21:33580455-33580657 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               155
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               129, 9
               

               Conread position:
               144-374
               

               Cow position:
               chr21:41918208-41917981 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               184
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               39, 54
               

               Conread position:
               144-377
               

               Cow position:
               chr21:24797691-24797916 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               177
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               58, 0
               

               Conread position:
               144-378
               

               Cow position:
               chr21:5898367-5898142 (view UCSC Genome Browser custom track)
               

               Alignm length:
               238
               

               Alignm identity:
               173
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               218, 54
               

               Conread position:
               144-380
               

               Cow position:
               chr21:22014225-22014456 (view UCSC Genome Browser custom track)
               

               Alignm length:
               240
               

               Alignm identity:
               168
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               149, 17
               

               Conread position:
               144-381
               

               Cow position:
               chr21:15271413-15271168 (view UCSC Genome Browser custom track)
               

               Alignm length:
               249
               

               Alignm identity:
               174
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               37, 155
               

               Conread position:
               144-382
               

               Cow position:
               chr21:5426974-5427194 (view UCSC Genome Browser custom track)
               

               Alignm length:
               240
               

               Alignm identity:
               175
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               223, 43
               

               Conread position:
               144-382
               

               Cow position:
               chr21:10858842-10859079 (view UCSC Genome Browser custom track)
               

               Alignm length:
               241
               

               Alignm identity:
               158
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               231, 52
               

               Conread position:
               144-382
               

               Cow position:
               chr21:17183957-17184189 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               190
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               218, 9
               

               Conread position:
               144-382
               

               Cow position:
               chr21:36508272-36508501 (view UCSC Genome Browser custom track)
               

               Alignm length:
               240
               

               Alignm identity:
               175
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               210, 55
               

               Conread position:
               144-383
               

               Cow position:
               chr21:19083564-19083316 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               170
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               45, 10
               

               Conread position:
               144-383
               

               Cow position:
               chr21:32297484-32297241 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               170
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               141, 9
               

               Conread position:
               144-383
               

               Cow position:
               chr21:40432480-40432731 (view UCSC Genome Browser custom track)
               

               Alignm length:
               257
               

               Alignm identity:
               187
               

               Alignm E-value:
               8e-32
               

               Alignm gaps (pig, cow):
               120, 9
               

               Conread position:
               144-387
               

               Cow position:
               chr21:33752-34006 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               193
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               7, 56
               

               Conread position:
               144-387
               

               Cow position:
               chr21:6834083-6834324 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               177
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               228, 46
               

               Conread position:
               144-387
               

               Cow position:
               chr21:13656601-13656361 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               176
               

               Alignm E-value:
               8e-33
               

               Alignm gaps (pig, cow):
               138, 10
               

               Conread position:
               144-387
               

               Cow position:
               chr21:13840361-13840598 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               167
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               138, 52
               

               Conread position:
               144-387
               

               Cow position:
               chr21:17403817-17403576 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               168
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               7, 44
               

               Conread position:
               144-388
               

               Cow position:
               chr21:42501078-42501328 (view UCSC Genome Browser custom track)
               

               Alignm length:
               253
               

               Alignm identity:
               190
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               50, 151
               

               Conread position:
               144-389
               

               Cow position:
               chr21:15544186-15543958 (view UCSC Genome Browser custom track)
               

               Alignm length:
               253
               

               Alignm identity:
               182
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               218, 35
               

               Conread position:
               144-390
               

               Cow position:
               chr21:41610200-41610455 (view UCSC Genome Browser custom track)
               

               Alignm length:
               258
               

               Alignm identity:
               196
               

               Alignm E-value:
               8.96831e-44
               

               Alignm gaps (pig, cow):
               7, 56
               

               Conread position:
               144-395
               

               Cow position:
               chr21:28244506-28244744 (view UCSC Genome Browser custom track)
               

               Alignm length:
               252
               

               Alignm identity:
               188
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               11, 0
               

               Conread position:
               144-400
               

               Cow position:
               chr21:7710199-7710448 (view UCSC Genome Browser custom track)
               

               Alignm length:
               260
               

               Alignm identity:
               174
               

               Alignm E-value:
               9e-23
               

               Alignm gaps (pig, cow):
               223, 9
               

               Conread position:
               144-409
               

               Cow position:
               chr21:11027321-11027065 (view UCSC Genome Browser custom track)
               

               Alignm length:
               269
               

               Alignm identity:
               183
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               136, 55
               

               Conread position:
               144-409
               

               Cow position:
               chr21:17559894-17559617 (view UCSC Genome Browser custom track)
               

               Alignm length:
               279
               

               Alignm identity:
               190
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               34, 9
               

               Conread position:
               144-413
               

               Cow position:
               chr21:19196129-19195862 (view UCSC Genome Browser custom track)
               

               Alignm length:
               274
               

               Alignm identity:
               190
               

               Alignm E-value:
               8e-32
               

               Alignm gaps (pig, cow):
               136, 9
               

               Conread position:
               144-419
               

               Cow position:
               chr21:12749205-12748933 (view UCSC Genome Browser custom track)
               

               Alignm length:
               277
               

               Alignm identity:
               180
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               129, 52
               

               Conread position:
               145-295
               

               Cow position:
               chr21:25628875-25628730 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               116
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               54, 0
               

               Conread position:
               145-311
               

               Cow position:
               chr21:8213243-8213080 (view UCSC Genome Browser custom track)
               

               Alignm length:
               169
               

               Alignm identity:
               130
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               141, 54
               

               Conread position:
               145-312
               

               Cow position:
               chr21:33563044-33563203 (view UCSC Genome Browser custom track)
               

               Alignm length:
               168
               

               Alignm identity:
               130
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               8, 0
               

               Conread position:
               145-361
               

               Cow position:
               chr21:18318748-18318959 (view UCSC Genome Browser custom track)
               

               Alignm length:
               217
               

               Alignm identity:
               151
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               8, 0
               

               Conread position:
               145-373
               

               Cow position:
               chr21:10410261-10410478 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               166
               

               Alignm E-value:
               7e-31
               

               Alignm gaps (pig, cow):
               8, 0
               

               Conread position:
               145-378
               

               Cow position:
               chr21:42328629-42328399 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               160
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               173, 8
               

               Conread position:
               145-383
               

               Cow position:
               chr21:10148027-10148268 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               164
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               47, 8
               

               Conread position:
               145-386
               

               Cow position:
               chr21:19958250-19958485 (view UCSC Genome Browser custom track)
               

               Alignm length:
               244
               

               Alignm identity:
               164
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               102, 8
               

               Conread position:
               145-387
               

               Cow position:
               chr21:9477198-9477435 (view UCSC Genome Browser custom track)
               

               Alignm length:
               244
               

               Alignm identity:
               167
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               6, 50
               

               Conread position:
               145-387
               

               Cow position:
               chr21:16914806-16915053 (view UCSC Genome Browser custom track)
               

               Alignm length:
               249
               

               Alignm identity:
               175
               

               Alignm E-value:
               8e-33
               

               Alignm gaps (pig, cow):
               9, 223
               

               Conread position:
               145-387
               

               Cow position:
               chr21:23980148-23979904 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               173
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               6, 55
               

               Conread position:
               145-401
               

               Cow position:
               chr21:45971137-45970893 (view UCSC Genome Browser custom track)
               

               Alignm length:
               258
               

               Alignm identity:
               187
               

               Alignm E-value:
               4e-37
               

               Alignm gaps (pig, cow):
               246, 67
               

               Conread position:
               145-404
               

               Cow position:
               chr21:4281839-4281597 (view UCSC Genome Browser custom track)
               

               Alignm length:
               260
               

               Alignm identity:
               189
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               8, 0
               

               Conread position:
               146-291
               

               Cow position:
               chr21:6388035-6388179 (view UCSC Genome Browser custom track)
               

               Alignm length:
               147
               

               Alignm identity:
               110
               

               Alignm E-value:
               9e-23
               

               Alignm gaps (pig, cow):
               142, 44
               

               Conread position:
               146-358
               

               Cow position:
               chr21:829171-828967 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               152
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               99, 15
               

               Conread position:
               146-361
               

               Cow position:
               chr21:20213741-20213525 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               158
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               146, 53
               

               Conread position:
               146-374
               

               Cow position:
               chr21:22210210-22209985 (view UCSC Genome Browser custom track)
               

               Alignm length:
               230
               

               Alignm identity:
               171
               

               Alignm E-value:
               6e-40
               

               Alignm gaps (pig, cow):
               147, 53
               

               Conread position:
               146-378
               

               Cow position:
               chr21:18568603-18568375 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               173
               

               Alignm E-value:
               4e-37
               

               Alignm gaps (pig, cow):
               114, 53
               

               Conread position:
               146-402
               

               Cow position:
               chr21:29658313-29658559 (view UCSC Genome Browser custom track)
               

               Alignm length:
               258
               

               Alignm identity:
               183
               

               Alignm E-value:
               8e-33
               

               Alignm gaps (pig, cow):
               127, 7
               

               Conread position:
               149-291
               

               Cow position:
               chr21:44861074-44860940 (view UCSC Genome Browser custom track)
               

               Alignm length:
               143
               

               Alignm identity:
               109
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               57, 0
               

               Conread position:
               149-361
               

               Cow position:
               chr21:2537100-2536890 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               157
               

               Alignm E-value:
               4e-37
               

               Alignm gaps (pig, cow):
               34, 0
               

               Conread position:
               149-361
               

               Cow position:
               chr21:17875154-17874944 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               140
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               50, 0
               

               Conread position:
               149-371
               

               Cow position:
               chr21:10114291-10114077 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               163
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               45, 0
               

               Conread position:
               149-382
               

               Cow position:
               chr21:977109-976877 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               181
               

               Alignm E-value:
               9e-34
               

               Alignm gaps (pig, cow):
               109, 50
               

               Conread position:
               149-389
               

               Cow position:
               chr21:36696051-36695811 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               159
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               205, 50
               

               Conread position:
               149-404
               

               Cow position:
               chr21:10743426-10743684 (view UCSC Genome Browser custom track)
               

               Alignm length:
               262
               

               Alignm identity:
               172
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               207, 47
               

               Conread position:
               150-285
               

               Cow position:
               chr21:12207762-12207629 (view UCSC Genome Browser custom track)
               

               Alignm length:
               136
               

               Alignm identity:
               103
               

               Alignm E-value:
               9e-23
               

               Alignm gaps (pig, cow):
               49, 0
               

               Conread position:
               150-289
               

               Cow position:
               chr21:10633597-10633464 (view UCSC Genome Browser custom track)
               

               Alignm length:
               140
               

               Alignm identity:
               109
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               49, 0
               

               Conread position:
               150-289
               

               Cow position:
               chr21:17062964-17063098 (view UCSC Genome Browser custom track)
               

               Alignm length:
               140
               

               Alignm identity:
               105
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               49, 0
               

               Conread position:
               150-292
               

               Cow position:
               chr21:7681139-7681277 (view UCSC Genome Browser custom track)
               

               Alignm length:
               143
               

               Alignm identity:
               108
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               43, 0
               

               Conread position:
               150-312
               

               Cow position:
               chr21:13163899-13164059 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               119
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               49, 0
               

               Conread position:
               150-331
               

               Cow position:
               chr21:45329907-45329738 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               135
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               11, 35
               

               Conread position:
               150-359
               

               Cow position:
               chr21:12739120-12739332 (view UCSC Genome Browser custom track)
               

               Alignm length:
               217
               

               Alignm identity:
               161
               

               Alignm E-value:
               9e-34
               

               Alignm gaps (pig, cow):
               149, 46
               

               Conread position:
               150-361
               

               Cow position:
               chr21:17193711-17193502 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               157
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               82, 49
               

               Conread position:
               150-371
               

               Cow position:
               chr21:20160716-20160938 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               177
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               212, 46
               

               Conread position:
               150-378
               

               Cow position:
               chr21:20152996-20153219 (view UCSC Genome Browser custom track)
               

               Alignm length:
               230
               

               Alignm identity:
               171
               

               Alignm E-value:
               5e-39
               

               Alignm gaps (pig, cow):
               136, 49
               

               Conread position:
               150-381
               

               Cow position:
               chr21:36910777-36911002 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               160
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               51, 137
               

               Conread position:
               150-382
               

               Cow position:
               chr21:41155905-41156139 (view UCSC Genome Browser custom track)
               

               Alignm length:
               238
               

               Alignm identity:
               166
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               52, 163
               

               Conread position:
               150-383
               

               Cow position:
               chr21:13089428-13089199 (view UCSC Genome Browser custom track)
               

               Alignm length:
               240
               

               Alignm identity:
               163
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               149, 46
               

               Conread position:
               150-387
               

               Cow position:
               chr21:22005869-22005627 (view UCSC Genome Browser custom track)
               

               Alignm length:
               244
               

               Alignm identity:
               166
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               31, 122
               

               Conread position:
               150-388
               

               Cow position:
               chr21:21968851-21969085 (view UCSC Genome Browser custom track)
               

               Alignm length:
               239
               

               Alignm identity:
               155
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               39, 0
               

               Conread position:
               150-389
               

               Cow position:
               chr21:28924149-28924402 (view UCSC Genome Browser custom track)
               

               Alignm length:
               256
               

               Alignm identity:
               185
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               137, 52
               

               Conread position:
               150-391
               

               Cow position:
               chr21:8241952-8242187 (view UCSC Genome Browser custom track)
               

               Alignm length:
               242
               

               Alignm identity:
               158
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               49, 0
               

               Conread position:
               150-392
               

               Cow position:
               chr21:12154171-12154406 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               183
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               104, 91
               

               Conread position:
               150-399
               

               Cow position:
               chr21:3763702-3763470 (view UCSC Genome Browser custom track)
               

               Alignm length:
               250
               

               Alignm identity:
               176
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               49, 0
               

               Conread position:
               150-413
               

               Cow position:
               chr21:37789959-37789706 (view UCSC Genome Browser custom track)
               

               Alignm length:
               264
               

               Alignm identity:
               171
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               48, 0
               

               Conread position:
               150-433
               

               Cow position:
               chr21:38918244-38918528 (view UCSC Genome Browser custom track)
               

               Alignm length:
               294
               

               Alignm identity:
               204
               

               Alignm E-value:
               8e-33
               

               Alignm gaps (pig, cow):
               135, 44
               

               Conread position:
               151-368
               

               Cow position:
               chr21:18341259-18341476 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               153
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               200, 48
               

               Conread position:
               152-381
               

               Cow position:
               chr21:26735449-26735662 (view UCSC Genome Browser custom track)
               

               Alignm length:
               232
               

               Alignm identity:
               167
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               15, 49
               

               Conread position:
               152-388
               

               Cow position:
               chr21:30938630-30938393 (view UCSC Genome Browser custom track)
               

               Alignm length:
               242
               

               Alignm identity:
               180
               

               Alignm E-value:
               5.99994e-41
               

               Alignm gaps (pig, cow):
               50, 117
               

               Conread position:
               152-400
               

               Cow position:
               chr21:20548318-20548081 (view UCSC Genome Browser custom track)
               

               Alignm length:
               255
               

               Alignm identity:
               177
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               92, 38
               

               Conread position:
               153-288
               

               Cow position:
               chr21:471719-471850 (view UCSC Genome Browser custom track)
               

               Alignm length:
               136
               

               Alignm identity:
               107
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               42, 0
               

               Conread position:
               153-294
               

               Cow position:
               chr21:25383067-25383208 (view UCSC Genome Browser custom track)
               

               Alignm length:
               143
               

               Alignm identity:
               111
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               42, 47
               

               Conread position:
               153-341
               

               Cow position:
               chr21:47764074-47763891 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               135
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               49, 0
               

               Conread position:
               153-344
               

               Cow position:
               chr21:6736146-6735964 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               143
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               49, 0
               

               Conread position:
               153-355
               

               Cow position:
               chr21:7221297-7221108 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               150
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               184, 43
               

               Conread position:
               153-356
               

               Cow position:
               chr21:37640599-37640807 (view UCSC Genome Browser custom track)
               

               Alignm length:
               210
               

               Alignm identity:
               146
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               22, 117
               

               Conread position:
               153-359
               

               Cow position:
               chr21:1764824-1764614 (view UCSC Genome Browser custom track)
               

               Alignm length:
               217
               

               Alignm identity:
               158
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               102, 41
               

               Conread position:
               153-361
               

               Cow position:
               chr21:3360970-3360770 (view UCSC Genome Browser custom track)
               

               Alignm length:
               210
               

               Alignm identity:
               165
               

               Alignm E-value:
               5.99994e-41
               

               Alignm gaps (pig, cow):
               72, 23
               

               Conread position:
               153-361
               

               Cow position:
               chr21:27863470-27863273 (view UCSC Genome Browser custom track)
               

               Alignm length:
               209
               

               Alignm identity:
               154
               

               Alignm E-value:
               7e-31
               

               Alignm gaps (pig, cow):
               39, 0
               

               Conread position:
               153-378
               

               Cow position:
               chr21:13225758-13225979 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               166
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               43, 0
               

               Conread position:
               153-382
               

               Cow position:
               chr21:13674609-13674384 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               156
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               129, 37
               

               Conread position:
               153-387
               

               Cow position:
               chr21:9278566-9278798 (view UCSC Genome Browser custom track)
               

               Alignm length:
               238
               

               Alignm identity:
               171
               

               Alignm E-value:
               8e-33
               

               Alignm gaps (pig, cow):
               32, 7
               

               Conread position:
               153-387
               

               Cow position:
               chr21:11779493-11779268 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               170
               

               Alignm E-value:
               8e-33
               

               Alignm gaps (pig, cow):
               153, 33
               

               Conread position:
               153-387
               

               Cow position:
               chr21:13580456-13580688 (view UCSC Genome Browser custom track)
               

               Alignm length:
               238
               

               Alignm identity:
               166
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               101, 46
               

               Conread position:
               153-387
               

               Cow position:
               chr21:31246307-31246543 (view UCSC Genome Browser custom track)
               

               Alignm length:
               241
               

               Alignm identity:
               172
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               32, 94
               

               Conread position:
               153-387
               

               Cow position:
               chr21:41140674-41140442 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               169
               

               Alignm E-value:
               9e-34
               

               Alignm gaps (pig, cow):
               219, 46
               

               Conread position:
               153-403
               

               Cow position:
               chr21:6584094-6583853 (view UCSC Genome Browser custom track)
               

               Alignm length:
               252
               

               Alignm identity:
               173
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               246, 18
               

               Conread position:
               153-408
               

               Cow position:
               chr21:5464793-5465040 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               181
               

               Alignm E-value:
               6e-30
               

               Alignm gaps (pig, cow):
               160, 33
               

               Conread position:
               153-409
               

               Cow position:
               chr21:8431057-8430799 (view UCSC Genome Browser custom track)
               

               Alignm length:
               262
               

               Alignm identity:
               195
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               122, 40
               

               Conread position:
               153-409
               

               Cow position:
               chr21:38720295-38720539 (view UCSC Genome Browser custom track)
               

               Alignm length:
               258
               

               Alignm identity:
               190
               

               Alignm E-value:
               5e-38
               

               Alignm gaps (pig, cow):
               140, 8
               

               Conread position:
               153-409
               

               Cow position:
               chr21:40589441-40589180 (view UCSC Genome Browser custom track)
               

               Alignm length:
               264
               

               Alignm identity:
               190
               

               Alignm E-value:
               5e-39
               

               Alignm gaps (pig, cow):
               210, 151
               

               Conread position:
               154-293
               

               Cow position:
               chr21:7581861-7581724 (view UCSC Genome Browser custom track)
               

               Alignm length:
               140
               

               Alignm identity:
               103
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               45, 0
               

               Conread position:
               154-296
               

               Cow position:
               chr21:5153665-5153804 (view UCSC Genome Browser custom track)
               

               Alignm length:
               143
               

               Alignm identity:
               109
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               42, 0
               

               Conread position:
               154-312
               

               Cow position:
               chr21:10538211-10538055 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               127
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               45, 0
               

               Conread position:
               154-359
               

               Cow position:
               chr21:10561539-10561341 (view UCSC Genome Browser custom track)
               

               Alignm length:
               206
               

               Alignm identity:
               151
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               45, 0
               

               Conread position:
               154-378
               

               Cow position:
               chr21:25014982-25014773 (view UCSC Genome Browser custom track)
               

               Alignm length:
               230
               

               Alignm identity:
               167
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               100, 36
               

               Conread position:
               154-378
               

               Cow position:
               chr21:41040988-41041215 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               170
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               143, 45
               

               Conread position:
               154-394
               

               Cow position:
               chr21:6051547-6051783 (view UCSC Genome Browser custom track)
               

               Alignm length:
               242
               

               Alignm identity:
               183
               

               Alignm E-value:
               2.8026e-45
               

               Alignm gaps (pig, cow):
               199, 45
               

               Conread position:
               155-281
               

               Cow position:
               chr21:35647783-35647659 (view UCSC Genome Browser custom track)
               

               Alignm length:
               127
               

               Alignm identity:
               98
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               44, 0
               

               Conread position:
               155-294
               

               Cow position:
               chr21:22939812-22939952 (view UCSC Genome Browser custom track)
               

               Alignm length:
               142
               

               Alignm identity:
               111
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               57, 37
               

               Conread position:
               155-360
               

               Cow position:
               chr21:17419037-17418837 (view UCSC Genome Browser custom track)
               

               Alignm length:
               206
               

               Alignm identity:
               142
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               44, 0
               

               Conread position:
               155-385
               

               Cow position:
               chr21:40291701-40291480 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               176
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               42, 0
               

               Conread position:
               155-386
               

               Cow position:
               chr21:12348810-12349043 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               168
               

               Alignm E-value:
               8e-32
               

               Alignm gaps (pig, cow):
               102, 43
               

               Conread position:
               155-387
               

               Cow position:
               chr21:8881966-8882193 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               161
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               24, 7
               

               Conread position:
               155-403
               

               Cow position:
               chr21:22313479-22313725 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               141
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               120, 34
               

               Conread position:
               156-297
               

               Cow position:
               chr21:15976679-15976817 (view UCSC Genome Browser custom track)
               

               Alignm length:
               142
               

               Alignm identity:
               110
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               35, 0
               

               Conread position:
               156-378
               

               Cow position:
               chr21:1562496-1562268 (view UCSC Genome Browser custom track)
               

               Alignm length:
               232
               

               Alignm identity:
               161
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               119, 43
               

               Conread position:
               156-387
               

               Cow position:
               chr21:31652434-31652657 (view UCSC Genome Browser custom track)
               

               Alignm length:
               232
               

               Alignm identity:
               160
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               30, 0
               

               Conread position:
               156-402
               

               Cow position:
               chr21:10070887-10070635 (view UCSC Genome Browser custom track)
               

               Alignm length:
               256
               

               Alignm identity:
               170
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               33, 95
               

               Conread position:
               157-294
               

               Cow position:
               chr21:43259266-43259401 (view UCSC Genome Browser custom track)
               

               Alignm length:
               139
               

               Alignm identity:
               109
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               111, 42
               

               Conread position:
               157-312
               

               Cow position:
               chr21:19360129-19359976 (view UCSC Genome Browser custom track)
               

               Alignm length:
               156
               

               Alignm identity:
               115
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               33, 0
               

               Conread position:
               157-361
               

               Cow position:
               chr21:19161759-19161961 (view UCSC Genome Browser custom track)
               

               Alignm length:
               206
               

               Alignm identity:
               146
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               123, 42
               

               Conread position:
               157-361
               

               Cow position:
               chr21:28237659-28237453 (view UCSC Genome Browser custom track)
               

               Alignm length:
               211
               

               Alignm identity:
               163
               

               Alignm E-value:
               5e-39
               

               Alignm gaps (pig, cow):
               142, 34
               

               Conread position:
               157-387
               

               Cow position:
               chr21:10009776-10009539 (view UCSC Genome Browser custom track)
               

               Alignm length:
               239
               

               Alignm identity:
               166
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               34, 112
               

               Conread position:
               158-335
               

               Cow position:
               chr21:27145944-27145768 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               128
               

               Alignm E-value:
               9e-23
               

               Alignm gaps (pig, cow):
               117, 38
               

               Conread position:
               158-389
               

               Cow position:
               chr21:13303840-13304071 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               158
               

               Alignm E-value:
               9e-23
               

               Alignm gaps (pig, cow):
               203, 38
               

               Conread position:
               158-390
               

               Cow position:
               chr21:8240360-8240587 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               159
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               129, 41
               

               Conread position:
               159-294
               

               Cow position:
               chr21:36909980-36910113 (view UCSC Genome Browser custom track)
               

               Alignm length:
               136
               

               Alignm identity:
               106
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               33, 0
               

               Conread position:
               159-361
               

               Cow position:
               chr21:49699991-49699791 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               143
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               31, 0
               

               Conread position:
               160-360
               

               Cow position:
               chr21:14360415-14360613 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               139
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               36, 0
               

               Conread position:
               160-360
               

               Cow position:
               chr21:41043269-41043072 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               139
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               38, 0
               

               Conread position:
               160-387
               

               Cow position:
               chr21:6153852-6154077 (view UCSC Genome Browser custom track)
               

               Alignm length:
               230
               

               Alignm identity:
               154
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               195, 8
               

               Conread position:
               160-387
               

               Cow position:
               chr21:27810437-27810663 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               170
               

               Alignm E-value:
               7e-31
               

               Alignm gaps (pig, cow):
               15, 33
               

               Conread position:
               160-390
               

               Cow position:
               chr21:82117-82334 (view UCSC Genome Browser custom track)
               

               Alignm length:
               232
               

               Alignm identity:
               166
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               213, 30
               

               Conread position:
               161-348
               

               Cow position:
               chr21:3415705-3415889 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               130
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               35, 0
               

               Conread position:
               161-359
               

               Cow position:
               chr21:17515859-17516054 (view UCSC Genome Browser custom track)
               

               Alignm length:
               199
               

               Alignm identity:
               134
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               35, 0
               

               Conread position:
               161-361
               

               Cow position:
               chr21:700741-700543 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               138
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               121, 37
               

               Conread position:
               161-361
               

               Cow position:
               chr21:17519072-17519274 (view UCSC Genome Browser custom track)
               

               Alignm length:
               205
               

               Alignm identity:
               142
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               124, 35
               

               Conread position:
               161-386
               

               Cow position:
               chr21:641638-641854 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               167
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               102, 33
               

               Conread position:
               161-387
               

               Cow position:
               chr21:17842946-17842725 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               152
               

               Alignm E-value:
               9e-23
               

               Alignm gaps (pig, cow):
               35, 0
               

               Conread position:
               161-387
               

               Cow position:
               chr21:27712192-27711962 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               173
               

               Alignm E-value:
               4e-37
               

               Alignm gaps (pig, cow):
               76, 35
               

               Conread position:
               161-387
               

               Cow position:
               chr21:28792457-28792683 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               150
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               39, 205
               

               Conread position:
               161-387
               

               Cow position:
               chr21:37928700-37928921 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               170
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               29, 0
               

               Conread position:
               161-387
               

               Cow position:
               chr21:39393799-39394023 (view UCSC Genome Browser custom track)
               

               Alignm length:
               232
               

               Alignm identity:
               160
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               109, 29
               

               Conread position:
               161-388
               

               Cow position:
               chr21:11174290-11174516 (view UCSC Genome Browser custom track)
               

               Alignm length:
               230
               

               Alignm identity:
               157
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               110, 35
               

               Conread position:
               161-392
               

               Cow position:
               chr21:16604266-16604035 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               158
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               202, 35
               

               Conread position:
               161-410
               

               Cow position:
               chr21:13048142-13047895 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               161
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               204, 35
               

               Conread position:
               162-381
               

               Cow position:
               chr21:40820801-40820586 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               156
               

               Alignm E-value:
               7e-31
               

               Alignm gaps (pig, cow):
               28, 0
               

               Conread position:
               162-387
               

               Cow position:
               chr21:30145576-30145357 (view UCSC Genome Browser custom track)
               

               Alignm length:
               230
               

               Alignm identity:
               166
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               200, 37
               

               Conread position:
               162-393
               

               Cow position:
               chr21:24875404-24875629 (view UCSC Genome Browser custom track)
               

               Alignm length:
               233
               

               Alignm identity:
               161
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               47, 28
               

               Conread position:
               163-361
               

               Cow position:
               chr21:12541346-12541151 (view UCSC Genome Browser custom track)
               

               Alignm length:
               199
               

               Alignm identity:
               134
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               36, 0
               

               Conread position:
               163-361
               

               Cow position:
               chr21:38943565-38943362 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               155
               

               Alignm E-value:
               9e-23
               

               Alignm gaps (pig, cow):
               50, 5
               

               Conread position:
               163-383
               

               Cow position:
               chr21:3177894-3178119 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               161
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               37, 124
               

               Conread position:
               163-385
               

               Cow position:
               chr21:25012135-25012348 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               153
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               27, 0
               

               Conread position:
               163-389
               

               Cow position:
               chr21:19148163-19148392 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               169
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               131, 33
               

               Conread position:
               163-403
               

               Cow position:
               chr21:38482434-38482667 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               176
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               11, 38
               

               Conread position:
               164-386
               

               Cow position:
               chr21:15012493-15012702 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               157
               

               Alignm E-value:
               9e-23
               

               Alignm gaps (pig, cow):
               209, 38
               

               Conread position:
               165-307
               

               Cow position:
               chr21:5130313-5130169 (view UCSC Genome Browser custom track)
               

               Alignm length:
               147
               

               Alignm identity:
               111
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               120, 25
               

               Conread position:
               165-387
               

               Cow position:
               chr21:29002100-29001875 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               161
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               147, 91
               

               Conread position:
               167-427
               

               Cow position:
               chr21:20174375-20174623 (view UCSC Genome Browser custom track)
               

               Alignm length:
               264
               

               Alignm identity:
               185
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               78, 23
               

               Conread position:
               168-378
               

               Cow position:
               chr21:24296710-24296503 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               151
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               80, 31
               

               Conread position:
               168-389
               

               Cow position:
               chr21:13090432-13090655 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               160
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               112, 31
               

               Conread position:
               168-452
               

               Cow position:
               chr21:34738635-34738915 (view UCSC Genome Browser custom track)
               

               Alignm length:
               290
               

               Alignm identity:
               191
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               175, 36
               

               Conread position:
               169-334
               

               Cow position:
               chr21:40059087-40059244 (view UCSC Genome Browser custom track)
               

               Alignm length:
               166
               

               Alignm identity:
               128
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               117, 0
               

               Conread position:
               169-378
               

               Cow position:
               chr21:31659088-31658892 (view UCSC Genome Browser custom track)
               

               Alignm length:
               210
               

               Alignm identity:
               151
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               25, 0
               

               Conread position:
               169-409
               

               Cow position:
               chr21:48482469-48482237 (view UCSC Genome Browser custom track)
               

               Alignm length:
               241
               

               Alignm identity:
               176
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               30, 0
               

               Conread position:
               171-386
               

               Cow position:
               chr21:21940346-21940142 (view UCSC Genome Browser custom track)
               

               Alignm length:
               217
               

               Alignm identity:
               157
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               104, 25
               

               Conread position:
               172-361
               

               Cow position:
               chr21:42355691-42355887 (view UCSC Genome Browser custom track)
               

               Alignm length:
               199
               

               Alignm identity:
               142
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               10, 24
               

               Conread position:
               172-391
               

               Cow position:
               chr21:745238-745450 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               166
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               190, 9
               

               Conread position:
               173-361
               

               Cow position:
               chr21:14745833-14746018 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               137
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               7, 0
               

               Conread position:
               174-378
               

               Cow position:
               chr21:29418636-29418840 (view UCSC Genome Browser custom track)
               

               Alignm length:
               211
               

               Alignm identity:
               159
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               188, 25
               

               Conread position:
               174-444
               

               Cow position:
               chr21:8523703-8523963 (view UCSC Genome Browser custom track)
               

               Alignm length:
               274
               

               Alignm identity:
               185
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               201, 55
               

               Conread position:
               175-385
               

               Cow position:
               chr21:5218767-5218978 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               159
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               38, 24
               

               Conread position:
               175-386
               

               Cow position:
               chr21:33169663-33169875 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               156
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               131, 10
               

               Conread position:
               175-387
               

               Cow position:
               chr21:30977192-30976996 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               159
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               8, 22
               

               Conread position:
               175-409
               

               Cow position:
               chr21:7539467-7539233 (view UCSC Genome Browser custom track)
               

               Alignm length:
               238
               

               Alignm identity:
               164
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               11, 96
               

               Conread position:
               175-422
               

               Cow position:
               chr21:22211318-22211559 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               169
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               21, 0
               

               Conread position:
               175-431
               

               Cow position:
               chr21:27409667-27409419 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               174
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               180, 21
               

               Conread position:
               176-345
               

               Cow position:
               chr21:9346486-9346656 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               126
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               20, 13
               

               Conread position:
               176-361
               

               Cow position:
               chr21:42146210-42146390 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               137
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               17, 11
               

               Conread position:
               176-380
               

               Cow position:
               chr21:43316829-43316627 (view UCSC Genome Browser custom track)
               

               Alignm length:
               207
               

               Alignm identity:
               144
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               106, 23
               

               Conread position:
               177-375
               

               Cow position:
               chr21:26454943-26454743 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               144
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               9, 95
               

               Conread position:
               177-385
               

               Cow position:
               chr21:26828904-26828696 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               148
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               185, 22
               

               Conread position:
               177-397
               

               Cow position:
               chr21:7201216-7201434 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               150
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               121, 22
               

               Conread position:
               179-371
               

               Cow position:
               chr21:42017534-42017345 (view UCSC Genome Browser custom track)
               

               Alignm length:
               196
               

               Alignm identity:
               151
               

               Alignm E-value:
               9e-34
               

               Alignm gaps (pig, cow):
               101, 25
               

               Conread position:
               179-377
               

               Cow position:
               chr21:11743435-11743232 (view UCSC Genome Browser custom track)
               

               Alignm length:
               207
               

               Alignm identity:
               145
               

               Alignm E-value:
               9e-23
               

               Alignm gaps (pig, cow):
               102, 20
               

               Conread position:
               179-378
               

               Cow position:
               chr21:42189688-42189497 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               145
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               36, 20
               

               Conread position:
               179-385
               

               Cow position:
               chr21:34834013-34833807 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               148
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               141, 64
               

               Conread position:
               180-387
               

               Cow position:
               chr21:41737976-41738182 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               158
               

               Alignm E-value:
               8e-32
               

               Alignm gaps (pig, cow):
               8, 12
               

               Conread position:
               180-425
               

               Cow position:
               chr21:15869760-15869994 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               174
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               94, 16
               

               Conread position:
               181-378
               

               Cow position:
               chr21:8986093-8986293 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               154
               

               Alignm E-value:
               9e-34
               

               Alignm gaps (pig, cow):
               114, 18
               

               Conread position:
               181-386
               

               Cow position:
               chr21:646242-646045 (view UCSC Genome Browser custom track)
               

               Alignm length:
               206
               

               Alignm identity:
               149
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               18, 0
               

               Conread position:
               181-387
               

               Cow position:
               chr21:4108846-4109049 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               146
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               191, 18
               

               Conread position:
               181-428
               

               Cow position:
               chr21:5214419-5214673 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               190
               

               Alignm E-value:
               5e-39
               

               Alignm gaps (pig, cow):
               110, 15
               

               Conread position:
               182-361
               

               Cow position:
               chr21:18783397-18783220 (view UCSC Genome Browser custom track)
               

               Alignm length:
               182
               

               Alignm identity:
               135
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               63, 17
               

               Conread position:
               182-388
               

               Cow position:
               chr21:10587415-10587212 (view UCSC Genome Browser custom track)
               

               Alignm length:
               207
               

               Alignm identity:
               138
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               186-389
               

               Cow position:
               chr21:30970009-30970207 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               153
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               104, 0
               

               Conread position:
               189-386
               

               Cow position:
               chr21:48334715-48334515 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               139
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               104, 143
               

               Conread position:
               189-408
               

               Cow position:
               chr21:25159248-25159491 (view UCSC Genome Browser custom track)
               

               Alignm length:
               244
               

               Alignm identity:
               171
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               112, 0
               

               Conread position:
               190-378
               

               Cow position:
               chr21:32271997-32272196 (view UCSC Genome Browser custom track)
               

               Alignm length:
               200
               

               Alignm identity:
               147
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               7, 0
               

               Conread position:
               190-394
               

               Cow position:
               chr21:45376029-45376231 (view UCSC Genome Browser custom track)
               

               Alignm length:
               210
               

               Alignm identity:
               147
               

               Alignm E-value:
               9e-23
               

               Alignm gaps (pig, cow):
               172, 23
               

               Conread position:
               190-404
               

               Cow position:
               chr21:31278261-31278475 (view UCSC Genome Browser custom track)
               

               Alignm length:
               217
               

               Alignm identity:
               149
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               59, 175
               

               Conread position:
               190-406
               

               Cow position:
               chr21:28882259-28882477 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               159
               

               Alignm E-value:
               8e-33
               

               Alignm gaps (pig, cow):
               172, 102
               

               Conread position:
               191-398
               

               Cow position:
               chr21:27744104-27744315 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               167
               

               Alignm E-value:
               6.99949e-42
               

               Alignm gaps (pig, cow):
               108, 92
               

               Conread position:
               191-423
               

               Cow position:
               chr21:22720653-22720874 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               168
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               108, 15
               

               Conread position:
               192-347
               

               Cow position:
               chr21:12640550-12640705 (view UCSC Genome Browser custom track)
               

               Alignm length:
               157
               

               Alignm identity:
               114
               

               Alignm E-value:
               9e-23
               

               Alignm gaps (pig, cow):
               81, 74
               

               Conread position:
               192-358
               

               Cow position:
               chr21:11353140-11353306 (view UCSC Genome Browser custom track)
               

               Alignm length:
               168
               

               Alignm identity:
               133
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               82, 73
               

               Conread position:
               192-361
               

               Cow position:
               chr21:11006691-11006522 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               125
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               61, 80
               

               Conread position:
               192-361
               

               Cow position:
               chr21:14760645-14760803 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               129
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               107, 0
               

               Conread position:
               192-379
               

               Cow position:
               chr21:32648109-32647922 (view UCSC Genome Browser custom track)
               

               Alignm length:
               190
               

               Alignm identity:
               138
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               45, 54
               

               Conread position:
               192-384
               

               Cow position:
               chr21:24350932-24351121 (view UCSC Genome Browser custom track)
               

               Alignm length:
               196
               

               Alignm identity:
               138
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               90, 40
               

               Conread position:
               192-386
               

               Cow position:
               chr21:8494720-8494913 (view UCSC Genome Browser custom track)
               

               Alignm length:
               196
               

               Alignm identity:
               138
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               90, 74
               

               Conread position:
               192-386
               

               Cow position:
               chr21:37361162-37360964 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               150
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               113, 155
               

               Conread position:
               192-387
               

               Cow position:
               chr21:34737246-34737431 (view UCSC Genome Browser custom track)
               

               Alignm length:
               197
               

               Alignm identity:
               141
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               56, 42
               

               Conread position:
               192-404
               

               Cow position:
               chr21:24757021-24757223 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               147
               

               Alignm E-value:
               9e-23
               

               Alignm gaps (pig, cow):
               21, 0
               

               Conread position:
               192-411
               

               Cow position:
               chr21:18449833-18450053 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               155
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               180, 30
               

               Conread position:
               192-434
               

               Cow position:
               chr21:10138015-10138264 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               167
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               89, 237
               

               Conread position:
               193-293
               

               Cow position:
               chr21:40305024-40305125 (view UCSC Genome Browser custom track)
               

               Alignm length:
               102
               

               Alignm identity:
               84
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               92, 0
               

               Conread position:
               193-387
               

               Cow position:
               chr21:16796932-16797124 (view UCSC Genome Browser custom track)
               

               Alignm length:
               197
               

               Alignm identity:
               146
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               92, 155
               

               Conread position:
               193-411
               

               Cow position:
               chr21:41194074-41193854 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               152
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               96, 76
               

               Conread position:
               194-361
               

               Cow position:
               chr21:6317606-6317439 (view UCSC Genome Browser custom track)
               

               Alignm length:
               169
               

               Alignm identity:
               126
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               63, 59
               

               Conread position:
               194-409
               

               Cow position:
               chr21:19220716-19220498 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               151
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               96, 71
               

               Conread position:
               194-425
               

               Cow position:
               chr21:36121309-36121537 (view UCSC Genome Browser custom track)
               

               Alignm length:
               233
               

               Alignm identity:
               164
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               212, 141
               

               Conread position:
               195-385
               

               Cow position:
               chr21:11182636-11182818 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               138
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               67, 0
               

               Conread position:
               195-389
               

               Cow position:
               chr21:1464426-1464624 (view UCSC Genome Browser custom track)
               

               Alignm length:
               199
               

               Alignm identity:
               141
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               159, 0
               

               Conread position:
               195-412
               

               Cow position:
               chr21:8506463-8506247 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               154
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               195, 106
               

               Conread position:
               195-412
               

               Cow position:
               chr21:8509351-8509135 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               154
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               195, 106
               

               Conread position:
               196-378
               

               Cow position:
               chr21:15305215-15305033 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               130
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               117, 168
               

               Conread position:
               196-387
               

               Cow position:
               chr21:40551659-40551472 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               136
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               23, 12
               

               Conread position:
               197-403
               

               Cow position:
               chr21:41437693-41437902 (view UCSC Genome Browser custom track)
               

               Alignm length:
               211
               

               Alignm identity:
               142
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               85, 72
               

               Conread position:
               198-362
               

               Cow position:
               chr21:7424928-7424766 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               126
               

               Alignm E-value:
               7e-31
               

               Alignm gaps (pig, cow):
               105, 0
               

               Conread position:
               199-360
               

               Cow position:
               chr21:27567981-27568139 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               126
               

               Alignm E-value:
               7e-31
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               199-361
               

               Cow position:
               chr21:6291833-6291995 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               123
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               199-361
               

               Cow position:
               chr21:37495859-37495698 (view UCSC Genome Browser custom track)
               

               Alignm length:
               166
               

               Alignm identity:
               127
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               33, 93
               

               Conread position:
               199-377
               

               Cow position:
               chr21:438649-438822 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               137
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               164, 86
               

               Conread position:
               199-387
               

               Cow position:
               chr21:3135782-3135592 (view UCSC Genome Browser custom track)
               

               Alignm length:
               193
               

               Alignm identity:
               147
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               162, 146
               

               Conread position:
               199-387
               

               Cow position:
               chr21:12473976-12473792 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               138
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               20, 50
               

               Conread position:
               199-388
               

               Cow position:
               chr21:44732956-44732766 (view UCSC Genome Browser custom track)
               

               Alignm length:
               195
               

               Alignm identity:
               139
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               65, 16
               

               Conread position:
               199-392
               

               Cow position:
               chr21:13134688-13134878 (view UCSC Genome Browser custom track)
               

               Alignm length:
               198
               

               Alignm identity:
               141
               

               Alignm E-value:
               9e-23
               

               Alignm gaps (pig, cow):
               164, 21
               

               Conread position:
               201-425
               

               Cow position:
               chr21:9873406-9873630 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               157
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               33, 131
               

               Conread position:
               202-361
               

               Cow position:
               chr21:15444996-15444836 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               120
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               21, 67
               

               Conread position:
               202-402
               

               Cow position:
               chr21:29011880-29011690 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               151
               

               Alignm E-value:
               6e-30
               

               Alignm gaps (pig, cow):
               31, 22
               

               Conread position:
               202-431
               

               Cow position:
               chr21:42454951-42455172 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               163
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               224, 11
               

               Conread position:
               204-379
               

               Cow position:
               chr21:40930383-40930213 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               124
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               97, 0
               

               Conread position:
               206-352
               

               Cow position:
               chr21:42905304-42905158 (view UCSC Genome Browser custom track)
               

               Alignm length:
               147
               

               Alignm identity:
               106
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               206-394
               

               Cow position:
               chr21:45446629-45446815 (view UCSC Genome Browser custom track)
               

               Alignm length:
               190
               

               Alignm identity:
               136
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               83, 9
               

               Conread position:
               208-378
               

               Cow position:
               chr21:40089673-40089499 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               128
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               12, 72
               

               Conread position:
               213-378
               

               Cow position:
               chr21:8359124-8358967 (view UCSC Genome Browser custom track)
               

               Alignm length:
               166
               

               Alignm identity:
               121
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               82, 0
               

               Conread position:
               213-387
               

               Cow position:
               chr21:18495322-18495485 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               134
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               46, 0
               

               Conread position:
               214-369
               

               Cow position:
               chr21:31258568-31258723 (view UCSC Genome Browser custom track)
               

               Alignm length:
               157
               

               Alignm identity:
               120
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               153, 149
               

               Conread position:
               214-384
               

               Cow position:
               chr21:43655804-43655970 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               134
               

               Alignm E-value:
               9e-34
               

               Alignm gaps (pig, cow):
               55, 0
               

               Conread position:
               215-374
               

               Cow position:
               chr21:16120058-16119904 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               124
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               88, 0
               

               Conread position:
               215-378
               

               Cow position:
               chr21:6041887-6042056 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               126
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               84, 0
               

               Conread position:
               215-381
               

               Cow position:
               chr21:39810161-39810330 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               126
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               143, 38
               

               Conread position:
               219-385
               

               Cow position:
               chr21:45537291-45537464 (view UCSC Genome Browser custom track)
               

               Alignm length:
               174
               

               Alignm identity:
               134
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               26, 0
               

               Conread position:
               220-389
               

               Cow position:
               chr21:39845701-39845880 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               131
               

               Alignm E-value:
               9e-23
               

               Alignm gaps (pig, cow):
               29, 0
               

               Conread position:
               222-378
               

               Cow position:
               chr21:42920894-42920738 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               118
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               73, 12
               

               Conread position:
               222-420
               

               Cow position:
               chr21:5344988-5345183 (view UCSC Genome Browser custom track)
               

               Alignm length:
               199
               

               Alignm identity:
               139
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               141, 0
               

               Conread position:
               224-353
               

               Cow position:
               chr21:41692162-41692291 (view UCSC Genome Browser custom track)
               

               Alignm length:
               130
               

               Alignm identity:
               98
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               225-386
               

               Cow position:
               chr21:17856878-17857036 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               121
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               148, 44
               

               Conread position:
               226-368
               

               Cow position:
               chr21:40916597-40916733 (view UCSC Genome Browser custom track)
               

               Alignm length:
               143
               

               Alignm identity:
               112
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               37, 0
               

               Conread position:
               227-409
               

               Cow position:
               chr21:18497879-18497708 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               132
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               58, 0
               

               Conread position:
               233-416
               

               Cow position:
               chr21:42341817-42341641 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               131
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               134, 61
               

               Conread position:
               239-386
               

               Cow position:
               chr21:7535419-7535274 (view UCSC Genome Browser custom track)
               

               Alignm length:
               149
               

               Alignm identity:
               111
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               133, 96
               

               Conread position:
               239-386
               

               Cow position:
               chr21:48242929-48242775 (view UCSC Genome Browser custom track)
               

               Alignm length:
               155
               

               Alignm identity:
               118
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               64, 0
               

               Conread position:
               244-373
               

               Cow position:
               chr21:37014296-37014168 (view UCSC Genome Browser custom track)
               

               Alignm length:
               130
               

               Alignm identity:
               102
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               119, 0
               

               Conread position:
               245-386
               

               Cow position:
               chr21:37479460-37479315 (view UCSC Genome Browser custom track)
               

               Alignm length:
               146
               

               Alignm identity:
               108
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               117, 0
               

               Conread position:
               246-387
               

               Cow position:
               chr21:42227565-42227425 (view UCSC Genome Browser custom track)
               

               Alignm length:
               142
               

               Alignm identity:
               106
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               78, 0
               

               Conread position:
               247-387
               

               Cow position:
               chr21:41829246-41829105 (view UCSC Genome Browser custom track)
               

               Alignm length:
               143
               

               Alignm identity:
               107
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               29, 24
               

               Conread position:
               252-387
               

               Cow position:
               chr21:5488889-5489024 (view UCSC Genome Browser custom track)
               

               Alignm length:
               139
               

               Alignm identity:
               109
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               121, 57
               
Show alignments to all cow chromosomes.
Conread position:	114-381
Cow position:	chr21:5970834-5970581 (view UCSC Genome Browser custom track)
Alignm length:	269
Alignm identity:	181
Alignm E-value:	3e-22
Alignm gaps (pig, cow):	68, 39
Conread position:	114-385
Cow position:	chr21:6997944-6998216 (view UCSC Genome Browser custom track)
Alignm length:	283
Alignm identity:	208
Alignm E-value:	2e-39
Alignm gaps (pig, cow):	17, 40
Conread position:	114-411
Cow position:	chr21:26018384-26018678 (view UCSC Genome Browser custom track)
Alignm length:	300
Alignm identity:	206
Alignm E-value:	1e-37
Alignm gaps (pig, cow):	168, 35
Conread position:	116-356
Cow position:	chr21:19766862-19767105 (view UCSC Genome Browser custom track)
Alignm length:	249
Alignm identity:	171
Alignm E-value:	4e-25
Alignm gaps (pig, cow):	164, 28
Conread position:	116-388
Cow position:	chr21:16083110-16082840 (view UCSC Genome Browser custom track)
Alignm length:	277
Alignm identity:	181
Alignm E-value:	3e-22
Alignm gaps (pig, cow):	15, 29
Conread position:	117-361
Cow position:	chr21:21686427-21686663 (view UCSC Genome Browser custom track)
Alignm length:	246
Alignm identity:	168
Alignm E-value:	4e-25
Alignm gaps (pig, cow):	163, 27
Conread position:	119-409
Cow position:	chr21:38728160-38728450 (view UCSC Genome Browser custom track)
Alignm length:	295
Alignm identity:	191
Alignm E-value:	4e-25
Alignm gaps (pig, cow):	5, 82
Conread position:	121-383
Cow position:	chr21:17511787-17512043 (view UCSC Genome Browser custom track)
Alignm length:	269
Alignm identity:	184
Alignm E-value:	4e-25
Alignm gaps (pig, cow):	107, 78
Conread position:	122-361
Cow position:	chr21:20163719-20163953 (view UCSC Genome Browser custom track)
Alignm length:	241
Alignm identity:	167
Alignm E-value:	2e-28
Alignm gaps (pig, cow):	20, 69
Conread position:	122-382
Cow position:	chr21:17252967-17252712 (view UCSC Genome Browser custom track)
Alignm length:	262
Alignm identity:	176
Alignm E-value:	4e-27
Alignm gaps (pig, cow):	20, 69
Conread position:	123-361
Cow position:	chr21:41107761-41107530 (view UCSC Genome Browser custom track)
Alignm length:	246
Alignm identity:	176
Alignm E-value:	1e-25
Alignm gaps (pig, cow):	14, 73
Conread position:	123-383
Cow position:	chr21:8950195-8950462 (view UCSC Genome Browser custom track)
Alignm length:	269
Alignm identity:	187
Alignm E-value:	8e-33
Alignm gaps (pig, cow):	31, 148
Conread position:	124-297
Cow position:	chr21:14228266-14228095 (view UCSC Genome Browser custom track)
Alignm length:	174
Alignm identity:	121
Alignm E-value:	2e-21
Alignm gaps (pig, cow):	66, 0
Conread position:	124-394
Cow position:	chr21:9418142-9417861 (view UCSC Genome Browser custom track)
Alignm length:	287
Alignm identity:	194
Alignm E-value:	4e-25
Alignm gaps (pig, cow):	16, 65
Conread position:	125-407
Cow position:	chr21:40266142-40266415 (view UCSC Genome Browser custom track)
Alignm length:	285
Alignm identity:	205
Alignm E-value:	6e-40
Alignm gaps (pig, cow):	152, 19
Conread position:	126-291
Cow position:	chr21:1591570-1591726 (view UCSC Genome Browser custom track)
Alignm length:	166
Alignm identity:	124
Alignm E-value:	1e-24
Alignm gaps (pig, cow):	73, 0
Conread position:	126-312
Cow position:	chr21:24642538-24642710 (view UCSC Genome Browser custom track)
Alignm length:	187
Alignm identity:	143
Alignm E-value:	1e-27
Alignm gaps (pig, cow):	27, 0
Conread position:	126-331
Cow position:	chr21:42007445-42007243 (view UCSC Genome Browser custom track)
Alignm length:	206
Alignm identity:	150
Alignm E-value:	3e-33
Alignm gaps (pig, cow):	59, 0
Conread position:	126-361
Cow position:	chr21:8351296-8351048 (view UCSC Genome Browser custom track)
Alignm length:	253
Alignm identity:	184
Alignm E-value:	8e-33
Alignm gaps (pig, cow):	15, 192
Conread position:	126-376
Cow position:	chr21:47363720-47363459 (view UCSC Genome Browser custom track)
Alignm length:	265
Alignm identity:	194
Alignm E-value:	1e-37
Alignm gaps (pig, cow):	16, 28