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Cow genome map

           
Conread name:
           
rche35_a23.y1
        

               
Conread position:
               
90-361
               

               
Cow position:
               
chr28:16450622-16450345 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
57, 162
               

               
Conread position:
               
104-394
               

               
Cow position:
               
chr28:21046640-21046365 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
189, 24
               

               
Conread position:
               
114-297
               

               
Cow position:
               
chr28:5650792-5650612 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
17, 40
               

               
Conread position:
               
114-387
               

               
Cow position:
               
chr28:13371194-13370926 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
140, 71
               

               
Conread position:
               
116-387
               

               
Cow position:
               
chr28:18847497-18847781 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
73, 37
               

               
Conread position:
               
119-360
               

               
Cow position:
               
chr28:30238169-30237928 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
5, 80
               

               
Conread position:
               
120-299
               

               
Cow position:
               
chr28:33051986-33052164 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
52, 80
               

               
Conread position:
               
120-380
               

               
Cow position:
               
chr28:12951369-12951626 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
26, 56
               

               
Conread position:
               
120-404
               

               
Cow position:
               
chr28:20173787-20174067 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
14, 35
               

               
Conread position:
               
121-429
               

               
Cow position:
               
chr28:17949163-17948864 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
21, 71
               

               
Conread position:
               
122-382
               

               
Cow position:
               
chr28:2279635-2279392 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
21, 34
               

               
Conread position:
               
123-343
               

               
Cow position:
               
chr28:3408264-3408053 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
66, 0
               

               
Conread position:
               
123-382
               

               
Cow position:
               
chr28:32179653-32179911 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
182, 10
               

               
Conread position:
               
123-388
               

               
Cow position:
               
chr28:10845062-10845315 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
125-252
               

               
Cow position:
               
chr28:3160995-3160872 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
128
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
8, 0
               

               
Conread position:
               
125-361
               

               
Cow position:
               
chr28:21363704-21363927 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
8, 0
               

               
Conread position:
               
126-289
               

               
Cow position:
               
chr28:13865803-13865957 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
63, 0
               

               
Conread position:
               
126-294
               

               
Cow position:
               
chr28:30865377-30865540 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
126-298
               

               
Cow position:
               
chr28:26685074-26685239 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
11, 29
               

               
Conread position:
               
126-404
               

               
Cow position:
               
chr28:4873389-4873097 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
15, 65
               

               
Conread position:
               
126-409
               

               
Cow position:
               
chr28:21207433-21207143 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
89, 18
               

               
Conread position:
               
127-283
               

               
Cow position:
               
chr28:21380840-21380992 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
127, 26
               

               
Conread position:
               
127-289
               

               
Cow position:
               
chr28:7156795-7156955 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
15, 29
               

               
Conread position:
               
127-385
               

               
Cow position:
               
chr28:5931315-5931560 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
236, 26
               

               
Conread position:
               
127-385
               

               
Cow position:
               
chr28:19564270-19564019 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
235, 72
               

               
Conread position:
               
127-387
               

               
Cow position:
               
chr28:3449263-3449520 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
136, 17
               

               
Conread position:
               
129-383
               

               
Cow position:
               
chr28:7619190-7618951 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
244, 61
               

               
Conread position:
               
129-412
               

               
Cow position:
               
chr28:11866704-11866432 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
274, 24
               

               
Conread position:
               
130-284
               

               
Cow position:
               
chr28:32365805-32365956 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
69, 0
               

               
Conread position:
               
130-297
               

               
Cow position:
               
chr28:32174592-32174755 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
130-311
               

               
Cow position:
               
chr28:20313238-20313415 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
69, 0
               

               
Conread position:
               
130-312
               

               
Cow position:
               
chr28:2752532-2752353 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
130-361
               

               
Cow position:
               
chr28:4045810-4046031 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
133, 41
               

               
Conread position:
               
130-371
               

               
Cow position:
               
chr28:11527298-11527063 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
14, 61
               

               
Conread position:
               
130-382
               

               
Cow position:
               
chr28:5193290-5193536 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
22, 63
               

               
Conread position:
               
130-389
               

               
Cow position:
               
chr28:20759739-20759479 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
9e-37
               

               
Alignm gaps (pig, cow):
               
173, 23
               

               
Conread position:
               
130-399
               

               
Cow position:
               
chr28:19054973-19055246 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
21, 68
               

               
Conread position:
               
130-427
               

               
Cow position:
               
chr28:8291387-8291664 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
13, 59
               

               
Conread position:
               
131-387
               

               
Cow position:
               
chr28:5437125-5436875 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
10, 60
               

               
Conread position:
               
131-400
               

               
Cow position:
               
chr28:11059465-11059722 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
231, 12
               

               
Conread position:
               
133-306
               

               
Cow position:
               
chr28:5230161-5229995 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
30, 11
               

               
Conread position:
               
133-353
               

               
Cow position:
               
chr28:8827127-8827343 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
18, 56
               

               
Conread position:
               
133-355
               

               
Cow position:
               
chr28:10681857-10681641 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
63, 0
               

               
Conread position:
               
133-361
               

               
Cow position:
               
chr28:26264790-26265017 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
10, 64
               

               
Conread position:
               
133-378
               

               
Cow position:
               
chr28:13474265-13474507 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
198, 28
               

               
Conread position:
               
133-378
               

               
Cow position:
               
chr28:20409356-20409599 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
179, 66
               

               
Conread position:
               
133-379
               

               
Cow position:
               
chr28:4185873-4186107 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
133-381
               

               
Cow position:
               
chr28:3411020-3410783 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
111, 11
               

               
Conread position:
               
133-382
               

               
Cow position:
               
chr28:5273474-5273220 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
7, 142
               

               
Conread position:
               
133-383
               

               
Cow position:
               
chr28:11426577-11426339 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
234, 57
               

               
Conread position:
               
133-383
               

               
Cow position:
               
chr28:14998031-14998270 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
56, 0
               

               
Conread position:
               
133-387
               

               
Cow position:
               
chr28:3078717-3078484 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
10, 21
               

               
Conread position:
               
133-388
               

               
Cow position:
               
chr28:8787504-8787752 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
63, 0
               

               
Conread position:
               
133-389
               

               
Cow position:
               
chr28:3445516-3445265 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
132, 28
               

               
Conread position:
               
133-389
               

               
Cow position:
               
chr28:21844922-21845170 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
15, 29
               

               
Conread position:
               
133-404
               

               
Cow position:
               
chr28:24966351-24966621 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
131, 48
               

               
Conread position:
               
133-407
               

               
Cow position:
               
chr28:10615983-10615719 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 67
               

               
Conread position:
               
134-288
               

               
Cow position:
               
chr28:21598288-21598133 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
17, 66
               

               
Conread position:
               
134-361
               

               
Cow position:
               
chr28:15601241-15601461 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
24, 58
               

               
Conread position:
               
134-361
               

               
Cow position:
               
chr28:20397405-20397179 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
213, 60
               

               
Conread position:
               
134-374
               

               
Cow position:
               
chr28:24082233-24082469 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
18, 57
               

               
Conread position:
               
134-375
               

               
Cow position:
               
chr28:31223590-31223351 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
123, 10
               

               
Conread position:
               
134-378
               

               
Cow position:
               
chr28:19262619-19262381 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
103, 19
               

               
Conread position:
               
134-379
               

               
Cow position:
               
chr28:4016497-4016732 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
220, 19
               

               
Conread position:
               
134-380
               

               
Cow position:
               
chr28:28765939-28765691 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
14, 61
               

               
Conread position:
               
134-381
               

               
Cow position:
               
chr28:10669544-10669793 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
47, 19
               

               
Conread position:
               
134-382
               

               
Cow position:
               
chr28:3143909-3143673 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
9, 19
               

               
Conread position:
               
134-384
               

               
Cow position:
               
chr28:4834879-4834628 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
228, 56
               

               
Conread position:
               
134-385
               

               
Cow position:
               
chr28:662072-662311 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
126, 18
               

               
Conread position:
               
134-387
               

               
Cow position:
               
chr28:5630065-5630310 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
134-387
               

               
Cow position:
               
chr28:30293622-30293367 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
160, 19
               

               
Conread position:
               
134-403
               

               
Cow position:
               
chr28:4282524-4282259 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
9e-37
               

               
Alignm gaps (pig, cow):
               
238, 19
               

               
Conread position:
               
135-361
               

               
Cow position:
               
chr28:23578866-23579089 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
7, 20
               

               
Conread position:
               
135-383
               

               
Cow position:
               
chr28:13174606-13174346 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
52, 189
               

               
Conread position:
               
135-388
               

               
Cow position:
               
chr28:9426385-9426139 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
29, 62
               

               
Conread position:
               
135-394
               

               
Cow position:
               
chr28:4070934-4071183 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
219, 19
               

               
Conread position:
               
135-450
               

               
Cow position:
               
chr28:5684670-5684980 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
228, 33
               

               
Conread position:
               
136-291
               

               
Cow position:
               
chr28:4765641-4765796 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
95, 52
               

               
Conread position:
               
136-356
               

               
Cow position:
               
chr28:34430455-34430241 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
146, 17
               

               
Conread position:
               
136-382
               

               
Cow position:
               
chr28:25727344-25727580 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
5, 18
               

               
Conread position:
               
136-384
               

               
Cow position:
               
chr28:3492816-3492577 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
237, 58
               

               
Conread position:
               
136-387
               

               
Cow position:
               
chr28:5199787-5200038 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
56, 229
               

               
Conread position:
               
136-412
               

               
Cow position:
               
chr28:12991103-12991372 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
43, 164
               

               
Conread position:
               
136-418
               

               
Cow position:
               
chr28:15272306-15272020 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
220, 62
               

               
Conread position:
               
136-424
               

               
Cow position:
               
chr28:17739793-17740082 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
237, 17
               

               
Conread position:
               
137-297
               

               
Cow position:
               
chr28:17398262-17398108 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
137-297
               

               
Cow position:
               
chr28:17414503-17414349 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
137-374
               

               
Cow position:
               
chr28:22183181-22182934 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
7, 237
               

               
Conread position:
               
137-377
               

               
Cow position:
               
chr28:12430573-12430808 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
20, 54
               

               
Conread position:
               
137-382
               

               
Cow position:
               
chr28:4158923-4159172 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
155, 53
               

               
Conread position:
               
138-361
               

               
Cow position:
               
chr28:14645143-14644915 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
10, 16
               

               
Conread position:
               
138-378
               

               
Cow position:
               
chr28:4013053-4013291 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
224, 57
               

               
Conread position:
               
138-382
               

               
Cow position:
               
chr28:10053360-10053124 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
57, 129
               

               
Conread position:
               
138-383
               

               
Cow position:
               
chr28:10196899-10196660 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
55, 100
               

               
Conread position:
               
138-385
               

               
Cow position:
               
chr28:21008698-21008460 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
12, 59
               

               
Conread position:
               
138-387
               

               
Cow position:
               
chr28:22132881-22133119 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
141, 15
               

               
Conread position:
               
139-297
               

               
Cow position:
               
chr28:21355201-21355357 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
7, 23
               

               
Conread position:
               
139-319
               

               
Cow position:
               
chr28:8149661-8149484 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
139-335
               

               
Cow position:
               
chr28:28631703-28631898 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
58, 14
               

               
Conread position:
               
139-355
               

               
Cow position:
               
chr28:4138701-4138486 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
149, 60
               

               
Conread position:
               
139-361
               

               
Cow position:
               
chr28:22308611-22308831 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
143, 51
               

               
Conread position:
               
139-376
               

               
Cow position:
               
chr28:17012325-17012099 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
15, 51
               

               
Conread position:
               
139-377
               

               
Cow position:
               
chr28:3023945-3023714 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
12, 53
               

               
Conread position:
               
139-377
               

               
Cow position:
               
chr28:3746168-3746400 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
50, 19
               

               
Conread position:
               
139-382
               

               
Cow position:
               
chr28:3740846-3741077 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
51, 0
               

               
Conread position:
               
139-382
               

               
Cow position:
               
chr28:5254845-5255079 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
228, 14
               

               
Conread position:
               
139-386
               

               
Cow position:
               
chr28:4881270-4881034 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
60, 0
               

               
Conread position:
               
139-387
               

               
Cow position:
               
chr28:16204364-16204118 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
126, 51
               

               
Conread position:
               
139-408
               

               
Cow position:
               
chr28:10958765-10959036 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
60, 13
               

               
Conread position:
               
139-409
               

               
Cow position:
               
chr28:33322428-33322690 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
91, 14
               

               
Conread position:
               
139-419
               

               
Cow position:
               
chr28:2523915-2524185 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
9e-37
               

               
Alignm gaps (pig, cow):
               
256, 14
               

               
Conread position:
               
139-462
               

               
Cow position:
               
chr28:27161355-27161026 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
160, 14
               

               
Conread position:
               
140-312
               

               
Cow position:
               
chr28:2772685-2772851 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
140-312
               

               
Cow position:
               
chr28:19079873-19079702 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
155, 13
               

               
Conread position:
               
140-312
               

               
Cow position:
               
chr28:25677370-25677201 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
140-374
               

               
Cow position:
               
chr28:6975212-6975433 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
124, 45
               

               
Conread position:
               
140-378
               

               
Cow position:
               
chr28:4181974-4182209 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
222, 9
               

               
Conread position:
               
140-385
               

               
Cow position:
               
chr28:3011297-3011058 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
7.00649e-45
               

               
Alignm gaps (pig, cow):
               
106, 13
               

               
Conread position:
               
140-386
               

               
Cow position:
               
chr28:19216793-19217028 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
223, 50
               

               
Conread position:
               
140-386
               

               
Cow position:
               
chr28:20124755-20124991 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
8, 15
               

               
Conread position:
               
140-390
               

               
Cow position:
               
chr28:4307927-4307672 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
23, 13
               

               
Conread position:
               
140-408
               

               
Cow position:
               
chr28:7144764-7145033 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
49, 13
               

               
Conread position:
               
140-423
               

               
Cow position:
               
chr28:24672237-24672519 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
140, 13
               

               
Conread position:
               
141-312
               

               
Cow position:
               
chr28:19026033-19025866 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
58, 0
               

               
Conread position:
               
141-335
               

               
Cow position:
               
chr28:9812251-9812433 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
113, 12
               

               
Conread position:
               
141-361
               

               
Cow position:
               
chr28:18370032-18369826 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
172, 12
               

               
Conread position:
               
141-361
               

               
Cow position:
               
chr28:29434456-29434220 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
158, 58
               

               
Conread position:
               
141-378
               

               
Cow position:
               
chr28:5236632-5236392 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
152, 58
               

               
Conread position:
               
141-380
               

               
Cow position:
               
chr28:26719316-26719540 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
220, 12
               

               
Conread position:
               
141-386
               

               
Cow position:
               
chr28:1837966-1838208 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
144, 12
               

               
Conread position:
               
141-387
               

               
Cow position:
               
chr28:5817811-5818049 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
22, 150
               

               
Conread position:
               
141-398
               

               
Cow position:
               
chr28:5204167-5204408 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
232, 49
               

               
Conread position:
               
141-407
               

               
Cow position:
               
chr28:7698007-7697742 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
10, 37
               

               
Conread position:
               
141-415
               

               
Cow position:
               
chr28:26944185-26943907 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
90, 12
               

               
Conread position:
               
141-428
               

               
Cow position:
               
chr28:12933761-12933475 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
60, 12
               

               
Conread position:
               
142-297
               

               
Cow position:
               
chr28:34248056-34247905 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
49, 0
               

               
Conread position:
               
142-341
               

               
Cow position:
               
chr28:24706871-24707075 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
155, 11
               

               
Conread position:
               
142-377
               

               
Cow position:
               
chr28:30746757-30746531 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
121, 57
               

               
Conread position:
               
142-379
               

               
Cow position:
               
chr28:29416743-29416516 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
220, 48
               

               
Conread position:
               
142-383
               

               
Cow position:
               
chr28:21103854-21103610 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
112, 62
               

               
Conread position:
               
142-387
               

               
Cow position:
               
chr28:3484555-3484802 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
126, 39
               

               
Conread position:
               
142-397
               

               
Cow position:
               
chr28:12672491-12672236 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
112, 11
               

               
Conread position:
               
142-400
               

               
Cow position:
               
chr28:13356393-13356137 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
85, 11
               

               
Conread position:
               
142-415
               

               
Cow position:
               
chr28:5826924-5827172 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
246, 11
               

               
Conread position:
               
143-378
               

               
Cow position:
               
chr28:34230202-34230435 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
229, 56
               

               
Conread position:
               
143-383
               

               
Cow position:
               
chr28:11987147-11987372 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
8, 81
               

               
Conread position:
               
143-383
               

               
Cow position:
               
chr28:12055385-12055610 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
8, 81
               

               
Conread position:
               
143-385
               

               
Cow position:
               
chr28:13133607-13133847 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
110, 10
               

               
Conread position:
               
143-389
               

               
Cow position:
               
chr28:23724488-23724255 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
93, 56
               

               
Conread position:
               
143-401
               

               
Cow position:
               
chr28:11422839-11422594 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
46, 0
               

               
Conread position:
               
143-408
               

               
Cow position:
               
chr28:7350628-7350886 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
230, 54
               

               
Conread position:
               
144-290
               

               
Cow position:
               
chr28:7388791-7388653 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
144-295
               

               
Cow position:
               
chr28:26922392-26922244 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
144-305
               

               
Cow position:
               
chr28:23410350-23410189 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
77, 58
               

               
Conread position:
               
144-341
               

               
Cow position:
               
chr28:23793336-23793144 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
112, 0
               

               
Conread position:
               
144-348
               

               
Cow position:
               
chr28:11559658-11559459 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
7, 56
               

               
Conread position:
               
144-354
               

               
Cow position:
               
chr28:8112298-8112090 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
146, 10
               

               
Conread position:
               
144-354
               

               
Cow position:
               
chr28:19222174-19221963 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
142, 9
               

               
Conread position:
               
144-361
               

               
Cow position:
               
chr28:6935210-6934989 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
48, 0
               

               
Conread position:
               
144-376
               

               
Cow position:
               
chr28:26982763-26982535 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
52, 0
               

               
Conread position:
               
144-378
               

               
Cow position:
               
chr28:32358083-32358312 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
218, 43
               

               
Conread position:
               
144-379
               

               
Cow position:
               
chr28:5139016-5138790 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
218, 53
               

               
Conread position:
               
144-381
               

               
Cow position:
               
chr28:14710309-14710545 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
20, 73
               

               
Conread position:
               
144-383
               

               
Cow position:
               
chr28:11346512-11346281 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
46, 0
               

               
Conread position:
               
144-383
               

               
Cow position:
               
chr28:11398823-11398581 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
7, 56
               

               
Conread position:
               
144-383
               

               
Cow position:
               
chr28:18625209-18625449 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
217, 52
               

               
Conread position:
               
144-388
               

               
Cow position:
               
chr28:7009004-7008769 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
10, 56
               

               
Conread position:
               
144-394
               

               
Cow position:
               
chr28:27218298-27218544 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
223, 47
               

               
Conread position:
               
144-400
               

               
Cow position:
               
chr28:3406435-3406187 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
138, 42
               

               
Conread position:
               
144-401
               

               
Cow position:
               
chr28:9740442-9740685 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
200, 9
               

               
Conread position:
               
144-402
               

               
Cow position:
               
chr28:10495322-10495068 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
23, 9
               

               
Conread position:
               
144-406
               

               
Cow position:
               
chr28:18770059-18770316 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
141, 55
               

               
Conread position:
               
144-409
               

               
Cow position:
               
chr28:2819750-2820004 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
93, 49
               

               
Conread position:
               
144-410
               

               
Cow position:
               
chr28:751203-751463 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
124, 9
               

               
Conread position:
               
144-411
               

               
Cow position:
               
chr28:13245537-13245799 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
144-417
               

               
Cow position:
               
chr28:2077465-2077741 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
37, 167
               

               
Conread position:
               
144-429
               

               
Cow position:
               
chr28:10606649-10606380 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
218, 9
               

               
Conread position:
               
145-312
               

               
Cow position:
               
chr28:8147886-8147723 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
8, 0
               

               
Conread position:
               
145-334
               

               
Cow position:
               
chr28:25399850-25400036 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
142, 8
               

               
Conread position:
               
145-361
               

               
Cow position:
               
chr28:7267967-7267762 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
54, 0
               

               
Conread position:
               
145-383
               

               
Cow position:
               
chr28:14657673-14657926 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
73, 54
               

               
Conread position:
               
145-385
               

               
Cow position:
               
chr28:5224684-5224914 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
154, 9
               

               
Conread position:
               
145-388
               

               
Cow position:
               
chr28:8304224-8304460 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
217, 8
               

               
Conread position:
               
145-399
               

               
Cow position:
               
chr28:4823581-4823825 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
132, 13
               

               
Conread position:
               
145-438
               

               
Cow position:
               
chr28:1383308-1383015 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
40, 8
               

               
Conread position:
               
146-295
               

               
Cow position:
               
chr28:31110027-31109880 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
53, 0
               

               
Conread position:
               
147-310
               

               
Cow position:
               
chr28:17601575-17601415 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
6, 0
               

               
Conread position:
               
148-308
               

               
Cow position:
               
chr28:4355524-4355683 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
21, 40
               

               
Conread position:
               
149-349
               

               
Cow position:
               
chr28:2898969-2899173 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
150, 50
               

               
Conread position:
               
149-351
               

               
Cow position:
               
chr28:6059490-6059284 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
168, 50
               

               
Conread position:
               
149-389
               

               
Cow position:
               
chr28:12598320-12598553 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
223, 12
               

               
Conread position:
               
149-404
               

               
Cow position:
               
chr28:4101500-4101745 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
214, 142
               

               
Conread position:
               
150-276
               

               
Cow position:
               
chr28:11786737-11786612 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
127
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
49, 0
               

               
Conread position:
               
150-292
               

               
Cow position:
               
chr28:23007749-23007609 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
49, 0
               

               
Conread position:
               
150-293
               

               
Cow position:
               
chr28:25249335-25249476 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
47, 0
               

               
Conread position:
               
150-348
               

               
Cow position:
               
chr28:13527177-13527373 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
105, 38
               

               
Conread position:
               
150-359
               

               
Cow position:
               
chr28:26743607-26743816 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
149, 40
               

               
Conread position:
               
150-361
               

               
Cow position:
               
chr28:3200440-3200649 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
49, 0
               

               
Conread position:
               
150-361
               

               
Cow position:
               
chr28:17071318-17071527 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
46, 0
               

               
Conread position:
               
150-361
               

               
Cow position:
               
chr28:27721684-27721883 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
150-383
               

               
Cow position:
               
chr28:555485-555704 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
49, 0
               

               
Conread position:
               
150-387
               

               
Cow position:
               
chr28:8408715-8408973 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
122, 49
               

               
Conread position:
               
150-389
               

               
Cow position:
               
chr28:4937261-4937019 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
87, 49
               

               
Conread position:
               
150-394
               

               
Cow position:
               
chr28:5144540-5144289 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
149, 49
               

               
Conread position:
               
150-397
               

               
Cow position:
               
chr28:4643789-4643541 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
213, 43
               

               
Conread position:
               
150-402
               

               
Cow position:
               
chr28:9099917-9100154 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
49, 0
               

               
Conread position:
               
150-407
               

               
Cow position:
               
chr28:8347712-8347967 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
5.99756e-43
               

               
Alignm gaps (pig, cow):
               
250, 49
               

               
Conread position:
               
150-434
               

               
Cow position:
               
chr28:3726230-3725947 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
193, 139
               

               
Conread position:
               
152-383
               

               
Cow position:
               
chr28:9384304-9384088 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
142, 47
               

               
Conread position:
               
152-387
               

               
Cow position:
               
chr28:1655115-1654877 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
30, 9
               

               
Conread position:
               
152-387
               

               
Cow position:
               
chr28:29661730-29661968 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
40, 114
               

               
Conread position:
               
152-392
               

               
Cow position:
               
chr28:10480824-10480586 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
75, 17
               

               
Conread position:
               
152-413
               

               
Cow position:
               
chr28:26826209-26826466 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
102, 11
               

               
Conread position:
               
153-293
               

               
Cow position:
               
chr28:5166752-5166889 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
153-297
               

               
Cow position:
               
chr28:5867711-5867848 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
140, 30
               

               
Conread position:
               
153-343
               

               
Cow position:
               
chr28:19295145-19294964 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
112, 51
               

               
Conread position:
               
153-354
               

               
Cow position:
               
chr28:5231922-5232118 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
46, 0
               

               
Conread position:
               
153-358
               

               
Cow position:
               
chr28:1538150-1538353 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
140, 38
               

               
Conread position:
               
153-361
               

               
Cow position:
               
chr28:23460132-23460331 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
72, 28
               

               
Conread position:
               
153-377
               

               
Cow position:
               
chr28:17680606-17680832 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
209, 51
               

               
Conread position:
               
153-378
               

               
Cow position:
               
chr28:8259612-8259840 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
132, 46
               

               
Conread position:
               
153-386
               

               
Cow position:
               
chr28:11307534-11307308 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
84, 43
               

               
Conread position:
               
153-387
               

               
Cow position:
               
chr28:6283504-6283273 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
209, 37
               

               
Conread position:
               
153-387
               

               
Cow position:
               
chr28:23296306-23296534 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
213, 46
               

               
Conread position:
               
153-412
               

               
Cow position:
               
chr28:34843588-34843334 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
239, 46
               

               
Conread position:
               
154-387
               

               
Cow position:
               
chr28:13048298-13048067 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
125, 32
               

               
Conread position:
               
155-384
               

               
Cow position:
               
chr28:11815092-11814871 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
82, 44
               

               
Conread position:
               
155-386
               

               
Cow position:
               
chr28:1632666-1632435 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
135, 22
               

               
Conread position:
               
155-387
               

               
Cow position:
               
chr28:14242678-14242907 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
18, 44
               

               
Conread position:
               
156-402
               

               
Cow position:
               
chr28:5235868-5236106 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
205, 46
               

               
Conread position:
               
157-383
               

               
Cow position:
               
chr28:21868445-21868666 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
216, 33
               

               
Conread position:
               
157-387
               

               
Cow position:
               
chr28:6563910-6563683 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
65, 33
               

               
Conread position:
               
157-387
               

               
Cow position:
               
chr28:11828968-11828746 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
210, 26
               

               
Conread position:
               
157-387
               

               
Cow position:
               
chr28:15362567-15362789 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
123, 39
               

               
Conread position:
               
157-393
               

               
Cow position:
               
chr28:7132099-7131871 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
75, 38
               

               
Conread position:
               
157-396
               

               
Cow position:
               
chr28:9636469-9636233 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
187, 33
               

               
Conread position:
               
158-361
               

               
Cow position:
               
chr28:7014442-7014641 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
41, 0
               

               
Conread position:
               
158-387
               

               
Cow position:
               
chr28:27313744-27313512 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
5, 39
               

               
Conread position:
               
158-401
               

               
Cow position:
               
chr28:1531996-1532239 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
204, 38
               

               
Conread position:
               
159-394
               

               
Cow position:
               
chr28:19039029-19038794 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
6.02558e-44
               

               
Alignm gaps (pig, cow):
               
204, 40
               

               
Conread position:
               
160-399
               

               
Cow position:
               
chr28:18797311-18797534 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
161-355
               

               
Cow position:
               
chr28:26055472-26055659 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
35, 0
               

               
Conread position:
               
161-374
               

               
Cow position:
               
chr28:5188437-5188230 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
76, 41
               

               
Conread position:
               
161-378
               

               
Cow position:
               
chr28:24064903-24064684 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
150, 26
               

               
Conread position:
               
161-384
               

               
Cow position:
               
chr28:19361728-19361947 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
35, 0
               

               
Conread position:
               
161-386
               

               
Cow position:
               
chr28:11585210-11584993 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
194, 29
               

               
Conread position:
               
161-387
               

               
Cow position:
               
chr28:7557742-7557513 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
124, 29
               

               
Conread position:
               
161-387
               

               
Cow position:
               
chr28:16919176-16918955 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
201, 29
               

               
Conread position:
               
161-389
               

               
Cow position:
               
chr28:777667-777895 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
103, 29
               

               
Conread position:
               
161-390
               

               
Cow position:
               
chr28:8396327-8396544 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
29, 0
               

               
Conread position:
               
161-409
               

               
Cow position:
               
chr28:9705645-9705888 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
134, 24
               

               
Conread position:
               
161-409
               

               
Cow position:
               
chr28:19128177-19127938 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
35, 0
               

               
Conread position:
               
161-432
               

               
Cow position:
               
chr28:4440288-4440562 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
200, 35
               

               
Conread position:
               
162-383
               

               
Cow position:
               
chr28:5552722-5552499 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
15, 24
               

               
Conread position:
               
162-410
               

               
Cow position:
               
chr28:26810672-26810916 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
153, 40
               

               
Conread position:
               
163-361
               

               
Cow position:
               
chr28:11016402-11016591 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
58, 13
               

               
Conread position:
               
163-361
               

               
Cow position:
               
chr28:12088654-12088459 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
98, 36
               

               
Conread position:
               
163-361
               

               
Cow position:
               
chr28:12973874-12974071 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
6, 34
               

               
Conread position:
               
163-361
               

               
Cow position:
               
chr28:16879567-16879755 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
163-389
               

               
Cow position:
               
chr28:5673870-5674085 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
111, 5
               

               
Conread position:
               
163-397
               

               
Cow position:
               
chr28:5805665-5805884 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
210, 35
               

               
Conread position:
               
163-402
               

               
Cow position:
               
chr28:6358420-6358182 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
123, 36
               

               
Conread position:
               
165-378
               

               
Cow position:
               
chr28:5441901-5441694 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
131, 34
               

               
Conread position:
               
165-378
               

               
Cow position:
               
chr28:30902122-30902325 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
202, 31
               

               
Conread position:
               
165-387
               

               
Cow position:
               
chr28:30303204-30302998 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
204, 24
               

               
Conread position:
               
168-359
               

               
Cow position:
               
chr28:18608369-18608180 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
28, 0
               

               
Conread position:
               
168-378
               

               
Cow position:
               
chr28:17728100-17727903 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
194, 31
               

               
Conread position:
               
168-384
               

               
Cow position:
               
chr28:6321816-6322029 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
9e-37
               

               
Alignm gaps (pig, cow):
               
151, 30
               

               
Conread position:
               
168-385
               

               
Cow position:
               
chr28:11411537-11411328 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
199, 117
               

               
Conread position:
               
168-403
               

               
Cow position:
               
chr28:4163580-4163354 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
31, 0
               

               
Conread position:
               
169-361
               

               
Cow position:
               
chr28:7413653-7413850 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
170-292
               

               
Cow position:
               
chr28:26784240-26784121 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
123
               

               
Alignm identity:
               
96
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
29, 0
               

               
Conread position:
               
170-374
               

               
Cow position:
               
chr28:24996612-24996419 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
172, 29
               

               
Conread position:
               
171-297
               

               
Cow position:
               
chr28:29042052-29041928 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
127
               

               
Alignm identity:
               
98
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
172-361
               

               
Cow position:
               
chr28:19994943-19994759 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
103, 27
               

               
Conread position:
               
172-385
               

               
Cow position:
               
chr28:9418963-9418732 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
126, 27
               

               
Conread position:
               
172-386
               

               
Cow position:
               
chr28:28903559-28903345 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
14, 35
               

               
Conread position:
               
173-312
               

               
Cow position:
               
chr28:12385289-12385153 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
173-388
               

               
Cow position:
               
chr28:28602757-28602966 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
173-389
               

               
Cow position:
               
chr28:2821257-2821476 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
57, 26
               

               
Conread position:
               
174-293
               

               
Cow position:
               
chr28:16691928-16692045 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
120
               

               
Alignm identity:
               
95
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
174-374
               

               
Cow position:
               
chr28:20968575-20968377 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
100, 16
               

               
Conread position:
               
174-379
               

               
Cow position:
               
chr28:3137548-3137762 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
94, 24
               

               
Conread position:
               
174-386
               

               
Cow position:
               
chr28:4022678-4022887 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
9e-37
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
175-359
               

               
Cow position:
               
chr28:25827725-25827543 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
103, 15
               

               
Conread position:
               
175-378
               

               
Cow position:
               
chr28:4073975-4074180 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
112, 23
               

               
Conread position:
               
175-403
               

               
Cow position:
               
chr28:117757-117527 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
5.99756e-43
               

               
Alignm gaps (pig, cow):
               
80, 24
               

               
Conread position:
               
177-361
               

               
Cow position:
               
chr28:8716379-8716193 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
82, 10
               

               
Conread position:
               
177-385
               

               
Cow position:
               
chr28:11798775-11798564 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
9, 94
               

               
Conread position:
               
180-341
               

               
Cow position:
               
chr28:13448134-13448291 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
182-384
               

               
Cow position:
               
chr28:22307022-22307215 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
97, 17
               

               
Conread position:
               
182-387
               

               
Cow position:
               
chr28:659282-659075 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
117, 17
               

               
Conread position:
               
183-383
               

               
Cow position:
               
chr28:22847578-22847375 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
10, 5
               

               
Conread position:
               
183-387
               

               
Cow position:
               
chr28:26530852-26530655 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
183-428
               

               
Cow position:
               
chr28:32593623-32593381 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
123, 16
               

               
Conread position:
               
187-361
               

               
Cow position:
               
chr28:5609901-5609731 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
87, 79
               

               
Conread position:
               
187-388
               

               
Cow position:
               
chr28:21118694-21118899 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
176, 35
               

               
Conread position:
               
188-404
               

               
Cow position:
               
chr28:32014800-32015013 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
5, 116
               

               
Conread position:
               
190-382
               

               
Cow position:
               
chr28:7964659-7964471 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
88, 0
               

               
Conread position:
               
190-387
               

               
Cow position:
               
chr28:3678381-3678576 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
172, 101
               

               
Conread position:
               
190-387
               

               
Cow position:
               
chr28:18761984-18761795 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
182, 60
               

               
Conread position:
               
190-387
               

               
Cow position:
               
chr28:19394894-19395075 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
191-404
               

               
Cow position:
               
chr28:17620340-17620132 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
191-438
               

               
Cow position:
               
chr28:20281778-20282012 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
215, 57
               

               
Conread position:
               
192-344
               

               
Cow position:
               
chr28:25459774-25459923 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
93, 0
               

               
Conread position:
               
192-361
               

               
Cow position:
               
chr28:3423798-3423964 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
93, 0
               

               
Conread position:
               
192-386
               

               
Cow position:
               
chr28:9109237-9109422 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
68, 0
               

               
Conread position:
               
192-386
               

               
Cow position:
               
chr28:9639668-9639866 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
192-387
               

               
Cow position:
               
chr28:18791063-18791245 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
45, 21
               

               
Conread position:
               
192-390
               

               
Cow position:
               
chr28:7644761-7644961 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
43, 61
               

               
Conread position:
               
192-394
               

               
Cow position:
               
chr28:4884235-4884033 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
33, 107
               

               
Conread position:
               
192-398
               

               
Cow position:
               
chr28:118630-118836 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
63, 173
               

               
Conread position:
               
193-378
               

               
Cow position:
               
chr28:5245378-5245565 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
108, 47
               

               
Conread position:
               
193-407
               

               
Cow position:
               
chr28:2892274-2892486 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
95, 171
               

               
Conread position:
               
193-444
               

               
Cow position:
               
chr28:4027440-4027201 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
234, 29
               

               
Conread position:
               
194-378
               

               
Cow position:
               
chr28:22085519-22085342 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
101, 0
               

               
Conread position:
               
194-383
               

               
Cow position:
               
chr28:2825442-2825631 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
41, 51
               

               
Conread position:
               
194-385
               

               
Cow position:
               
chr28:26820256-26820066 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
119, 49
               

               
Conread position:
               
194-387
               

               
Cow position:
               
chr28:8898067-8898266 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
125, 68
               

               
Conread position:
               
194-389
               

               
Cow position:
               
chr28:10203142-10203329 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
179, 69
               

               
Conread position:
               
194-390
               

               
Cow position:
               
chr28:11827711-11827910 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
167, 19
               

               
Conread position:
               
195-383
               

               
Cow position:
               
chr28:4870781-4870583 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
89, 0
               

               
Conread position:
               
195-383
               

               
Cow position:
               
chr28:29989086-29988899 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
172, 84
               

               
Conread position:
               
195-385
               

               
Cow position:
               
chr28:22332552-22332744 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
58, 75
               

               
Conread position:
               
195-401
               

               
Cow position:
               
chr28:11239296-11239086 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
48, 160
               

               
Conread position:
               
196-388
               

               
Cow position:
               
chr28:8681405-8681224 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
103, 0
               

               
Conread position:
               
196-407
               

               
Cow position:
               
chr28:10252892-10252682 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
176, 89
               

               
Conread position:
               
197-383
               

               
Cow position:
               
chr28:11305606-11305427 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
198-334
               

               
Cow position:
               
chr28:8167327-8167193 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
39, 48
               

               
Conread position:
               
198-359
               

               
Cow position:
               
chr28:30385180-30385340 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
76, 10
               

               
Conread position:
               
198-382
               

               
Cow position:
               
chr28:8936177-8936357 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
175, 76
               

               
Conread position:
               
198-387
               

               
Cow position:
               
chr28:10863765-10863583 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
97, 0
               

               
Conread position:
               
201-361
               

               
Cow position:
               
chr28:26269416-26269586 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
121, 0
               

               
Conread position:
               
201-383
               

               
Cow position:
               
chr28:4866544-4866369 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
17, 101
               

               
Conread position:
               
201-387
               

               
Cow position:
               
chr28:21744745-21744929 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
162, 98
               

               
Conread position:
               
201-427
               

               
Cow position:
               
chr28:9677699-9677924 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
149, 93
               

               
Conread position:
               
202-361
               

               
Cow position:
               
chr28:19118000-19118159 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
80, 85
               

               
Conread position:
               
202-387
               

               
Cow position:
               
chr28:11562215-11562032 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
161, 0
               

               
Conread position:
               
203-381
               

               
Cow position:
               
chr28:26960877-26960702 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
159, 76
               

               
Conread position:
               
203-401
               

               
Cow position:
               
chr28:24698722-24698924 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
77, 63
               

               
Conread position:
               
205-361
               

               
Cow position:
               
chr28:4227510-4227663 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
87, 16
               

               
Conread position:
               
206-378
               

               
Cow position:
               
chr28:25518729-25518553 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
93, 7
               

               
Conread position:
               
206-386
               

               
Cow position:
               
chr28:26868116-26867943 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
93, 0
               

               
Conread position:
               
210-387
               

               
Cow position:
               
chr28:16200704-16200528 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
153, 0
               

               
Conread position:
               
213-398
               

               
Cow position:
               
chr28:8656124-8655944 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
214-361
               

               
Cow position:
               
chr28:16857064-16856919 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
71, 0
               

               
Conread position:
               
215-334
               

               
Cow position:
               
chr28:24726393-24726280 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
120
               

               
Alignm identity:
               
97
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
86, 0
               

               
Conread position:
               
215-381
               

               
Cow position:
               
chr28:11310056-11309883 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
88, 0
               

               
Conread position:
               
215-389
               

               
Cow position:
               
chr28:3311181-3311004 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
14, 149
               

               
Conread position:
               
215-399
               

               
Cow position:
               
chr28:3759034-3759225 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
40, 55
               

               
Conread position:
               
215-402
               

               
Cow position:
               
chr28:16252361-16252177 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
141, 28
               

               
Conread position:
               
215-409
               

               
Cow position:
               
chr28:29500444-29500638 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
76, 152
               

               
Conread position:
               
216-401
               

               
Cow position:
               
chr28:34830199-34830387 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
64, 50
               

               
Conread position:
               
219-385
               

               
Cow position:
               
chr28:17738105-17737941 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
26, 16
               

               
Conread position:
               
220-378
               

               
Cow position:
               
chr28:3494404-3494569 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
220-409
               

               
Cow position:
               
chr28:6301130-6301316 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
143, 0
               

               
Conread position:
               
222-389
               

               
Cow position:
               
chr28:4077295-4077122 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
81, 147
               

               
Conread position:
               
223-383
               

               
Cow position:
               
chr28:21263209-21263362 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
72, 0
               

               
Conread position:
               
223-421
               

               
Cow position:
               
chr28:16159819-16159625 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
51, 46
               

               
Conread position:
               
227-361
               

               
Cow position:
               
chr28:24767460-24767595 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
136
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
120, 0
               

               
Conread position:
               
228-382
               

               
Cow position:
               
chr28:22278575-22278413 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
66, 0
               

               
Conread position:
               
232-361
               

               
Cow position:
               
chr28:8165155-8165026 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
130
               

               
Alignm identity:
               
97
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
234-382
               

               
Cow position:
               
chr28:22170217-22170075 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
25, 58
               

               
Conread position:
               
251-361
               

               
Cow position:
               
chr28:16964887-16964777 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
111
               

               
Alignm identity:
               
87
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
271-403
               

               
Cow position:
               
chr28:6124162-6124033 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
133
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
46, 0
               
Show alignments to all cow chromosomes.