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Cow genome map

           
Conread name:
           
rche35_a23.y1
        

               
Conread position:
               
72-404
               

               
Cow position:
               
chr6:66590019-66590345 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
82, 118
               

               
Conread position:
               
92-359
               

               
Cow position:
               
chr6:66433908-66434174 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
156, 107
               

               
Conread position:
               
116-286
               

               
Cow position:
               
chr6:8788055-8787887 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
71, 0
               

               
Conread position:
               
116-340
               

               
Cow position:
               
chr6:2153616-2153395 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
116-379
               

               
Cow position:
               
chr6:4691997-4691724 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
11, 77
               

               
Conread position:
               
116-387
               

               
Cow position:
               
chr6:63426645-63426911 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
22, 41
               

               
Conread position:
               
116-405
               

               
Cow position:
               
chr6:55297110-55296828 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
138, 15
               

               
Conread position:
               
119-379
               

               
Cow position:
               
chr6:21587445-21587195 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
7, 36
               

               
Conread position:
               
121-297
               

               
Cow position:
               
chr6:37783390-37783561 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
121-387
               

               
Cow position:
               
chr6:61824401-61824657 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
168, 32
               

               
Conread position:
               
122-357
               

               
Cow position:
               
chr6:12928135-12928358 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
158, 31
               

               
Conread position:
               
122-360
               

               
Cow position:
               
chr6:2607591-2607829 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
11, 133
               

               
Conread position:
               
123-361
               

               
Cow position:
               
chr6:19401833-19402067 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
81, 124
               

               
Conread position:
               
123-398
               

               
Cow position:
               
chr6:1703795-1704058 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
231, 10
               

               
Conread position:
               
123-415
               

               
Cow position:
               
chr6:42034761-42035043 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
79, 94
               

               
Conread position:
               
125-389
               

               
Cow position:
               
chr6:27888343-27888597 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
28, 0
               

               
Conread position:
               
125-390
               

               
Cow position:
               
chr6:48803642-48803390 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
104, 65
               

               
Conread position:
               
126-280
               

               
Cow position:
               
chr6:17527594-17527445 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
126-291
               

               
Cow position:
               
chr6:2899579-2899410 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
126-294
               

               
Cow position:
               
chr6:47339364-47339198 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
126-382
               

               
Cow position:
               
chr6:44078511-44078757 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
126-383
               

               
Cow position:
               
chr6:11246757-11247011 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
16, 72
               

               
Conread position:
               
126-385
               

               
Cow position:
               
chr6:33206736-33206974 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
43, 23
               

               
Conread position:
               
126-385
               

               
Cow position:
               
chr6:47305332-47305587 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
25, 66
               

               
Conread position:
               
126-387
               

               
Cow position:
               
chr6:17313727-17313990 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
167, 73
               

               
Conread position:
               
126-387
               

               
Cow position:
               
chr6:40032183-40032425 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
69, 0
               

               
Conread position:
               
126-408
               

               
Cow position:
               
chr6:19446247-19446520 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
8.99998e-41
               

               
Alignm gaps (pig, cow):
               
104, 18
               

               
Conread position:
               
126-411
               

               
Cow position:
               
chr6:48010530-48010251 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
162, 27
               

               
Conread position:
               
127-297
               

               
Cow position:
               
chr6:35103337-35103167 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
21, 55
               

               
Conread position:
               
127-361
               

               
Cow position:
               
chr6:38207496-38207264 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
138, 41
               

               
Conread position:
               
127-383
               

               
Cow position:
               
chr6:44194554-44194312 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
246, 22
               

               
Conread position:
               
127-387
               

               
Cow position:
               
chr6:59603215-59602965 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
235, 63
               

               
Conread position:
               
127-394
               

               
Cow position:
               
chr6:5330406-5330674 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
147, 27
               

               
Conread position:
               
128-295
               

               
Cow position:
               
chr6:58709065-58709234 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
66, 25
               

               
Conread position:
               
128-361
               

               
Cow position:
               
chr6:39358352-39358121 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
23, 160
               

               
Conread position:
               
128-400
               

               
Cow position:
               
chr6:58459716-58459976 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
129-312
               

               
Cow position:
               
chr6:55535753-55535576 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
129-361
               

               
Cow position:
               
chr6:41733622-41733857 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
68, 25
               

               
Conread position:
               
129-376
               

               
Cow position:
               
chr6:67950949-67951194 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
22, 62
               

               
Conread position:
               
129-389
               

               
Cow position:
               
chr6:7190122-7189877 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
229, 24
               

               
Conread position:
               
129-390
               

               
Cow position:
               
chr6:48468996-48469259 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
150, 24
               

               
Conread position:
               
129-395
               

               
Cow position:
               
chr6:37149185-37149443 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
234, 24
               

               
Conread position:
               
129-399
               

               
Cow position:
               
chr6:61524210-61523951 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
136, 67
               

               
Conread position:
               
129-404
               

               
Cow position:
               
chr6:32121902-32122165 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
227, 61
               

               
Conread position:
               
130-281
               

               
Cow position:
               
chr6:51969073-51969221 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
12, 24
               

               
Conread position:
               
130-341
               

               
Cow position:
               
chr6:18144188-18144412 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
68, 23
               

               
Conread position:
               
130-359
               

               
Cow position:
               
chr6:10466088-10466310 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
15, 62
               

               
Conread position:
               
130-361
               

               
Cow position:
               
chr6:48379619-48379389 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
21, 75
               

               
Conread position:
               
130-395
               

               
Cow position:
               
chr6:40050066-40050332 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
46, 23
               

               
Conread position:
               
130-396
               

               
Cow position:
               
chr6:7119623-7119374 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
12, 24
               

               
Conread position:
               
130-404
               

               
Cow position:
               
chr6:445318-445592 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
13, 67
               

               
Conread position:
               
130-417
               

               
Cow position:
               
chr6:27219176-27219441 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
44, 0
               

               
Conread position:
               
131-311
               

               
Cow position:
               
chr6:582275-582100 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
59, 0
               

               
Conread position:
               
131-361
               

               
Cow position:
               
chr6:51835395-51835620 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
19, 54
               

               
Conread position:
               
131-383
               

               
Cow position:
               
chr6:23025108-23024855 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
17, 23
               

               
Conread position:
               
132-391
               

               
Cow position:
               
chr6:47355822-47356077 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
154, 21
               

               
Conread position:
               
132-400
               

               
Cow position:
               
chr6:6264650-6264912 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
83, 64
               

               
Conread position:
               
133-289
               

               
Cow position:
               
chr6:68652353-68652198 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
19, 67
               

               
Conread position:
               
133-294
               

               
Cow position:
               
chr6:53090008-53090166 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
56, 0
               

               
Conread position:
               
133-297
               

               
Cow position:
               
chr6:16316311-16316477 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
11, 61
               

               
Conread position:
               
133-318
               

               
Cow position:
               
chr6:7989418-7989238 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
18, 67
               

               
Conread position:
               
133-335
               

               
Cow position:
               
chr6:55502765-55502969 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
151, 65
               

               
Conread position:
               
133-343
               

               
Cow position:
               
chr6:61269309-61269515 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
11, 57
               

               
Conread position:
               
133-358
               

               
Cow position:
               
chr6:35842655-35842879 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
9, 41
               

               
Conread position:
               
133-359
               

               
Cow position:
               
chr6:9718913-9718697 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
48, 0
               

               
Conread position:
               
133-359
               

               
Cow position:
               
chr6:51539085-51538852 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
1e-20
               

               
Alignm gaps (pig, cow):
               
26, 138
               

               
Conread position:
               
133-361
               

               
Cow position:
               
chr6:68816167-68816392 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
175, 39
               

               
Conread position:
               
133-378
               

               
Cow position:
               
chr6:7627961-7628207 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
46, 20
               

               
Conread position:
               
133-379
               

               
Cow position:
               
chr6:5609447-5609203 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
11, 57
               

               
Conread position:
               
133-379
               

               
Cow position:
               
chr6:38609967-38610213 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
121, 63
               

               
Conread position:
               
133-381
               

               
Cow position:
               
chr6:1475345-1475583 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
229, 20
               

               
Conread position:
               
133-382
               

               
Cow position:
               
chr6:27851709-27851466 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
65, 43
               

               
Conread position:
               
133-383
               

               
Cow position:
               
chr6:23696000-23696238 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
234, 21
               

               
Conread position:
               
133-386
               

               
Cow position:
               
chr6:52478412-52478165 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
57, 0
               

               
Conread position:
               
133-386
               

               
Cow position:
               
chr6:60274013-60273763 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
9, 61
               

               
Conread position:
               
133-387
               

               
Cow position:
               
chr6:2078815-2078568 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
133-387
               

               
Cow position:
               
chr6:47540850-47540588 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
13, 26
               

               
Conread position:
               
133-390
               

               
Cow position:
               
chr6:43345444-43345191 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
31, 64
               

               
Conread position:
               
133-391
               

               
Cow position:
               
chr6:6965397-6965137 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
148, 39
               

               
Conread position:
               
133-391
               

               
Cow position:
               
chr6:53546034-53546285 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
229, 56
               

               
Conread position:
               
133-402
               

               
Cow position:
               
chr6:63251923-63251657 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
234, 20
               

               
Conread position:
               
133-404
               

               
Cow position:
               
chr6:21293498-21293234 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
9, 104
               

               
Conread position:
               
133-406
               

               
Cow position:
               
chr6:55209555-55209825 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
26, 67
               

               
Conread position:
               
133-407
               

               
Cow position:
               
chr6:36202820-36203085 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
142, 63
               

               
Conread position:
               
133-409
               

               
Cow position:
               
chr6:59104599-59104874 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
89, 20
               

               
Conread position:
               
133-416
               

               
Cow position:
               
chr6:17704829-17705109 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
18, 64
               

               
Conread position:
               
133-425
               

               
Cow position:
               
chr6:53145683-53145393 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
149, 20
               

               
Conread position:
               
133-428
               

               
Cow position:
               
chr6:54365331-54365031 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
15, 65
               

               
Conread position:
               
133-433
               

               
Cow position:
               
chr6:62929494-62929796 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
19, 36
               

               
Conread position:
               
134-301
               

               
Cow position:
               
chr6:54573258-54573425 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
13, 66
               

               
Conread position:
               
134-312
               

               
Cow position:
               
chr6:36284242-36284417 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
31, 19
               

               
Conread position:
               
134-358
               

               
Cow position:
               
chr6:54036142-54035921 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
42, 0
               

               
Conread position:
               
134-361
               

               
Cow position:
               
chr6:12091993-12091764 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
145, 62
               

               
Conread position:
               
134-361
               

               
Cow position:
               
chr6:21399758-21399532 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
25, 64
               

               
Conread position:
               
134-361
               

               
Cow position:
               
chr6:32453384-32453611 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
9, 66
               

               
Conread position:
               
134-361
               

               
Cow position:
               
chr6:41014978-41014752 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
103, 19
               

               
Conread position:
               
134-379
               

               
Cow position:
               
chr6:35990235-35989994 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
225, 19
               

               
Conread position:
               
134-380
               

               
Cow position:
               
chr6:42567490-42567736 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
17, 64
               

               
Conread position:
               
134-386
               

               
Cow position:
               
chr6:19264497-19264250 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
228, 15
               

               
Conread position:
               
134-387
               

               
Cow position:
               
chr6:62669866-62670119 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
159, 19
               

               
Conread position:
               
134-388
               

               
Cow position:
               
chr6:68272592-68272851 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
55, 14
               

               
Conread position:
               
134-390
               

               
Cow position:
               
chr6:50090643-50090897 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
146, 19
               

               
Conread position:
               
134-390
               

               
Cow position:
               
chr6:50984224-50984474 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
163, 15
               

               
Conread position:
               
135-359
               

               
Cow position:
               
chr6:60121600-60121376 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
30, 62
               

               
Conread position:
               
135-361
               

               
Cow position:
               
chr6:60516825-60517060 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
13, 69
               

               
Conread position:
               
135-381
               

               
Cow position:
               
chr6:143372-143132 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
8.99998e-41
               

               
Alignm gaps (pig, cow):
               
228, 18
               

               
Conread position:
               
135-382
               

               
Cow position:
               
chr6:50810673-50810431 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
7, 92
               

               
Conread position:
               
135-383
               

               
Cow position:
               
chr6:38771287-38771515 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
238, 18
               

               
Conread position:
               
135-401
               

               
Cow position:
               
chr6:58304416-58304673 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
135-402
               

               
Cow position:
               
chr6:6098257-6097982 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
164, 14
               

               
Conread position:
               
135-405
               

               
Cow position:
               
chr6:54846278-54846009 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
145, 61
               

               
Conread position:
               
135-409
               

               
Cow position:
               
chr6:68643990-68644259 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
221, 61
               

               
Conread position:
               
135-410
               

               
Cow position:
               
chr6:694152-693870 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
23, 57
               

               
Conread position:
               
135-411
               

               
Cow position:
               
chr6:51526491-51526767 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
232, 18
               

               
Conread position:
               
136-361
               

               
Cow position:
               
chr6:38853656-38853434 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
136-381
               

               
Cow position:
               
chr6:21470427-21470190 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
124, 54
               

               
Conread position:
               
136-386
               

               
Cow position:
               
chr6:46465822-46466063 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
8, 19
               

               
Conread position:
               
136-390
               

               
Cow position:
               
chr6:21467261-21467015 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
245, 18
               

               
Conread position:
               
137-353
               

               
Cow position:
               
chr6:19013075-19013279 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
137-361
               

               
Cow position:
               
chr6:21475731-21475947 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
137-387
               

               
Cow position:
               
chr6:8688844-8688602 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
6, 18
               

               
Conread position:
               
137-387
               

               
Cow position:
               
chr6:58370761-58370998 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
216, 62
               

               
Conread position:
               
137-387
               

               
Cow position:
               
chr6:60057654-60057386 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
15, 37
               

               
Conread position:
               
137-389
               

               
Cow position:
               
chr6:8731411-8731675 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
55, 118
               

               
Conread position:
               
137-390
               

               
Cow position:
               
chr6:26155151-26155400 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
126, 53
               

               
Conread position:
               
138-289
               

               
Cow position:
               
chr6:41937268-41937118 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
61, 15
               

               
Conread position:
               
138-368
               

               
Cow position:
               
chr6:67069811-67069582 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
100, 39
               

               
Conread position:
               
138-377
               

               
Cow position:
               
chr6:9302713-9302486 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
126, 52
               

               
Conread position:
               
138-382
               

               
Cow position:
               
chr6:46558062-46558297 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
141, 15
               

               
Conread position:
               
138-387
               

               
Cow position:
               
chr6:19045626-19045880 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
161, 58
               

               
Conread position:
               
138-387
               

               
Cow position:
               
chr6:51530186-51529937 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
8.99998e-41
               

               
Alignm gaps (pig, cow):
               
234, 215
               

               
Conread position:
               
138-389
               

               
Cow position:
               
chr6:17414443-17414194 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
217, 153
               

               
Conread position:
               
138-390
               

               
Cow position:
               
chr6:4468774-4469022 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
225, 15
               

               
Conread position:
               
138-422
               

               
Cow position:
               
chr6:20157337-20157619 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
224, 49
               

               
Conread position:
               
139-292
               

               
Cow position:
               
chr6:19681521-19681369 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
12, 61
               

               
Conread position:
               
139-306
               

               
Cow position:
               
chr6:7568128-7568293 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
54, 38
               

               
Conread position:
               
139-312
               

               
Cow position:
               
chr6:60451431-60451602 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
15, 59
               

               
Conread position:
               
139-333
               

               
Cow position:
               
chr6:31078871-31078674 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
9, 16
               

               
Conread position:
               
139-361
               

               
Cow position:
               
chr6:6229707-6229908 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
1e-20
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
139-361
               

               
Cow position:
               
chr6:13367290-13367504 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
115, 48
               

               
Conread position:
               
139-361
               

               
Cow position:
               
chr6:17794758-17794533 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
175, 14
               

               
Conread position:
               
139-361
               

               
Cow position:
               
chr6:50467140-50467360 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
59, 0
               

               
Conread position:
               
139-361
               

               
Cow position:
               
chr6:60118156-60118364 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
139-361
               

               
Cow position:
               
chr6:61109792-61110004 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
51, 0
               

               
Conread position:
               
139-374
               

               
Cow position:
               
chr6:49398614-49398395 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
1e-20
               

               
Alignm gaps (pig, cow):
               
106, 33
               

               
Conread position:
               
139-374
               

               
Cow position:
               
chr6:60144190-60143960 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
222, 17
               

               
Conread position:
               
139-377
               

               
Cow position:
               
chr6:19292804-19293040 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
24, 14
               

               
Conread position:
               
139-378
               

               
Cow position:
               
chr6:41656037-41655812 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
223, 51
               

               
Conread position:
               
139-378
               

               
Cow position:
               
chr6:50504461-50504694 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
174, 63
               

               
Conread position:
               
139-379
               

               
Cow position:
               
chr6:56850022-56850261 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
58, 48
               

               
Conread position:
               
139-382
               

               
Cow position:
               
chr6:17816990-17816748 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
42, 14
               

               
Conread position:
               
139-382
               

               
Cow position:
               
chr6:67728381-67728625 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
223, 14
               

               
Conread position:
               
139-383
               

               
Cow position:
               
chr6:44566420-44566671 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
27, 14
               

               
Conread position:
               
139-384
               

               
Cow position:
               
chr6:4383485-4383718 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
139-385
               

               
Cow position:
               
chr6:31535564-31535322 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
224, 50
               

               
Conread position:
               
139-387
               

               
Cow position:
               
chr6:35727849-35728097 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
42, 14
               

               
Conread position:
               
139-387
               

               
Cow position:
               
chr6:55404912-55405164 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
36, 14
               

               
Conread position:
               
139-387
               

               
Cow position:
               
chr6:58725375-58725614 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
56, 0
               

               
Conread position:
               
139-388
               

               
Cow position:
               
chr6:53841501-53841254 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
228, 48
               

               
Conread position:
               
139-389
               

               
Cow position:
               
chr6:67451366-67451118 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
60, 0
               

               
Conread position:
               
139-390
               

               
Cow position:
               
chr6:37827947-37827697 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
50, 14
               

               
Conread position:
               
139-391
               

               
Cow position:
               
chr6:51581248-51580999 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
12, 70
               

               
Conread position:
               
139-393
               

               
Cow position:
               
chr6:323300-323047 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
7, 16
               

               
Conread position:
               
139-396
               

               
Cow position:
               
chr6:15447194-15446936 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 61
               

               
Conread position:
               
139-399
               

               
Cow position:
               
chr6:60468244-60468497 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
132, 22
               

               
Conread position:
               
139-401
               

               
Cow position:
               
chr6:24536526-24536267 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
136, 14
               

               
Conread position:
               
139-404
               

               
Cow position:
               
chr6:6060569-6060305 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
16, 62
               

               
Conread position:
               
139-432
               

               
Cow position:
               
chr6:42518990-42519277 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
50, 13
               

               
Conread position:
               
140-293
               

               
Cow position:
               
chr6:49096443-49096297 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
140-361
               

               
Cow position:
               
chr6:10039728-10039948 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
5, 57
               

               
Conread position:
               
140-362
               

               
Cow position:
               
chr6:39093757-39093968 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
140-371
               

               
Cow position:
               
chr6:63720206-63720425 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
222, 68
               

               
Conread position:
               
140-382
               

               
Cow position:
               
chr6:60266175-60265926 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
145, 27
               

               
Conread position:
               
140-383
               

               
Cow position:
               
chr6:63065833-63066081 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
88, 13
               

               
Conread position:
               
140-385
               

               
Cow position:
               
chr6:32287645-32287877 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
31, 13
               

               
Conread position:
               
140-387
               

               
Cow position:
               
chr6:15243260-15243514 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
20, 63
               

               
Conread position:
               
140-388
               

               
Cow position:
               
chr6:611556-611792 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
11, 32
               

               
Conread position:
               
140-394
               

               
Cow position:
               
chr6:38640239-38640489 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
8, 21
               

               
Conread position:
               
140-404
               

               
Cow position:
               
chr6:35181249-35180992 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
141-286
               

               
Cow position:
               
chr6:20196291-20196153 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
141-302
               

               
Cow position:
               
chr6:67806007-67805849 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
141-312
               

               
Cow position:
               
chr6:18049016-18048848 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
129, 12
               

               
Conread position:
               
141-333
               

               
Cow position:
               
chr6:14063303-14063105 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
10, 0
               

               
Conread position:
               
141-350
               

               
Cow position:
               
chr6:67643684-67643478 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
49, 0
               

               
Conread position:
               
141-355
               

               
Cow position:
               
chr6:8125334-8125545 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
141-361
               

               
Cow position:
               
chr6:19996623-19996837 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
113, 40
               

               
Conread position:
               
141-361
               

               
Cow position:
               
chr6:57287654-57287449 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
7, 13
               

               
Conread position:
               
141-374
               

               
Cow position:
               
chr6:24781548-24781317 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
155, 58
               

               
Conread position:
               
141-376
               

               
Cow position:
               
chr6:57546214-57545988 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
213, 48
               

               
Conread position:
               
141-378
               

               
Cow position:
               
chr6:581740-581502 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
10, 49
               

               
Conread position:
               
141-378
               

               
Cow position:
               
chr6:12270527-12270288 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
62, 12
               

               
Conread position:
               
141-382
               

               
Cow position:
               
chr6:28148262-28148507 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
190, 12
               

               
Conread position:
               
141-383
               

               
Cow position:
               
chr6:18118042-18117806 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
221, 65
               

               
Conread position:
               
141-383
               

               
Cow position:
               
chr6:20219769-20219533 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
96, 50
               

               
Conread position:
               
141-384
               

               
Cow position:
               
chr6:10399897-10399661 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
160, 8
               

               
Conread position:
               
141-387
               

               
Cow position:
               
chr6:35171613-35171860 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
53, 12
               

               
Conread position:
               
141-409
               

               
Cow position:
               
chr6:62683377-62683653 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
41, 12
               

               
Conread position:
               
142-292
               

               
Cow position:
               
chr6:46865583-46865436 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
142-334
               

               
Cow position:
               
chr6:21590715-21590900 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
57, 0
               

               
Conread position:
               
142-358
               

               
Cow position:
               
chr6:41169528-41169314 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
131, 48
               

               
Conread position:
               
142-379
               

               
Cow position:
               
chr6:56986639-56986408 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
10, 0
               

               
Conread position:
               
142-382
               

               
Cow position:
               
chr6:47245789-47246025 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
129, 29
               

               
Conread position:
               
142-387
               

               
Cow position:
               
chr6:26450322-26450552 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
217, 57
               

               
Conread position:
               
142-388
               

               
Cow position:
               
chr6:12338000-12338243 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
5, 49
               

               
Conread position:
               
142-400
               

               
Cow position:
               
chr6:24110291-24110542 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
142-402
               

               
Cow position:
               
chr6:48988439-48988706 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
148, 11
               

               
Conread position:
               
143-345
               

               
Cow position:
               
chr6:69153422-69153618 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
143-359
               

               
Cow position:
               
chr6:33450960-33450757 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
10, 0
               

               
Conread position:
               
143-374
               

               
Cow position:
               
chr6:37692760-37692983 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
143-378
               

               
Cow position:
               
chr6:120257-120480 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
211, 10
               

               
Conread position:
               
143-385
               

               
Cow position:
               
chr6:8600011-8600255 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
150, 12
               

               
Conread position:
               
143-400
               

               
Cow position:
               
chr6:35726103-35726351 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
122, 55
               

               
Conread position:
               
143-406
               

               
Cow position:
               
chr6:8562732-8562985 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
10, 0
               

               
Conread position:
               
143-413
               

               
Cow position:
               
chr6:64431946-64432203 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
65, 0
               

               
Conread position:
               
144-299
               

               
Cow position:
               
chr6:37463033-37463186 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
144, 9
               

               
Conread position:
               
144-307
               

               
Cow position:
               
chr6:54867528-54867688 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
144-310
               

               
Cow position:
               
chr6:65259478-65259320 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
22, 17
               

               
Conread position:
               
144-311
               

               
Cow position:
               
chr6:47799304-47799468 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
144-312
               

               
Cow position:
               
chr6:67456729-67456894 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
144-340
               

               
Cow position:
               
chr6:67281906-67282092 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
144-342
               

               
Cow position:
               
chr6:36189709-36189903 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
144-355
               

               
Cow position:
               
chr6:38641507-38641710 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
165, 55
               

               
Conread position:
               
144-356
               

               
Cow position:
               
chr6:52431017-52430802 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
45, 9
               

               
Conread position:
               
144-359
               

               
Cow position:
               
chr6:46173248-46173038 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
44, 0
               

               
Conread position:
               
144-361
               

               
Cow position:
               
chr6:1770188-1769972 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
138, 52
               

               
Conread position:
               
144-361
               

               
Cow position:
               
chr6:51121064-51120844 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
48, 9
               

               
Conread position:
               
144-361
               

               
Cow position:
               
chr6:51542903-51543124 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
40, 9
               

               
Conread position:
               
144-361
               

               
Cow position:
               
chr6:56799888-56799669 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
45, 9
               

               
Conread position:
               
144-361
               

               
Cow position:
               
chr6:57089208-57089426 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
51, 149
               

               
Conread position:
               
144-361
               

               
Cow position:
               
chr6:61681088-61681300 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
144-377
               

               
Cow position:
               
chr6:21061871-21061649 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
217, 56
               

               
Conread position:
               
144-378
               

               
Cow position:
               
chr6:17997309-17997074 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
170, 53
               

               
Conread position:
               
144-378
               

               
Cow position:
               
chr6:21535047-21535283 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
217, 151
               

               
Conread position:
               
144-378
               

               
Cow position:
               
chr6:43787901-43787665 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
218, 51
               

               
Conread position:
               
144-378
               

               
Cow position:
               
chr6:60819524-60819754 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
130, 10
               

               
Conread position:
               
144-382
               

               
Cow position:
               
chr6:9751043-9750802 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
143, 9
               

               
Conread position:
               
144-383
               

               
Cow position:
               
chr6:10105968-10105740 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
144-383
               

               
Cow position:
               
chr6:12669111-12669343 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
161, 9
               

               
Conread position:
               
144-383
               

               
Cow position:
               
chr6:14166698-14166447 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
7, 114
               

               
Conread position:
               
144-385
               

               
Cow position:
               
chr6:38441185-38441425 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
159, 46
               

               
Conread position:
               
144-387
               

               
Cow position:
               
chr6:54854250-54854499 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
45, 107
               

               
Conread position:
               
144-389
               

               
Cow position:
               
chr6:6724516-6724758 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
138, 54
               

               
Conread position:
               
144-389
               

               
Cow position:
               
chr6:12964862-12965103 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
8.99998e-41
               

               
Alignm gaps (pig, cow):
               
131, 55
               

               
Conread position:
               
144-389
               

               
Cow position:
               
chr6:57079434-57079675 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
144-394
               

               
Cow position:
               
chr6:15300819-15300587 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
55, 0
               

               
Conread position:
               
144-398
               

               
Cow position:
               
chr6:55417519-55417276 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
37, 55
               

               
Conread position:
               
144-406
               

               
Cow position:
               
chr6:7539585-7539847 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
19, 14
               

               
Conread position:
               
144-409
               

               
Cow position:
               
chr6:55548524-55548266 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
52, 0
               

               
Conread position:
               
144-413
               

               
Cow position:
               
chr6:60783880-60784142 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
141, 54
               

               
Conread position:
               
144-419
               

               
Cow position:
               
chr6:53932838-53932567 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
54, 9
               

               
Conread position:
               
144-455
               

               
Cow position:
               
chr6:15242843-15243151 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
6, 45
               

               
Conread position:
               
145-288
               

               
Cow position:
               
chr6:6343438-6343582 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
82, 8
               

               
Conread position:
               
145-294
               

               
Cow position:
               
chr6:528273-528125 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
141, 54
               

               
Conread position:
               
145-312
               

               
Cow position:
               
chr6:35993596-35993759 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
145-331
               

               
Cow position:
               
chr6:59631917-59631727 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
44, 0
               

               
Conread position:
               
145-361
               

               
Cow position:
               
chr6:2584954-2585163 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
8, 0
               

               
Conread position:
               
145-361
               

               
Cow position:
               
chr6:60740026-60740232 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
8, 0
               

               
Conread position:
               
145-382
               

               
Cow position:
               
chr6:3329999-3330238 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
1e-20
               

               
Alignm gaps (pig, cow):
               
30, 8
               

               
Conread position:
               
145-387
               

               
Cow position:
               
chr6:60850708-60850946 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
15, 60
               

               
Conread position:
               
145-387
               

               
Cow position:
               
chr6:62437425-62437666 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
220, 49
               

               
Conread position:
               
145-404
               

               
Cow position:
               
chr6:65264531-65264289 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
46, 0
               

               
Conread position:
               
145-407
               

               
Cow position:
               
chr6:23401980-23401727 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
228, 8
               

               
Conread position:
               
145-409
               

               
Cow position:
               
chr6:48435847-48436106 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
217, 8
               

               
Conread position:
               
145-412
               

               
Cow position:
               
chr6:5095533-5095269 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
27, 8
               

               
Conread position:
               
145-419
               

               
Cow position:
               
chr6:1941820-1941554 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
83, 8
               

               
Conread position:
               
145-422
               

               
Cow position:
               
chr6:13565100-13565370 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
129, 9
               

               
Conread position:
               
146-289
               

               
Cow position:
               
chr6:24004548-24004689 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
44, 0
               

               
Conread position:
               
146-361
               

               
Cow position:
               
chr6:23110187-23109969 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
46, 7
               

               
Conread position:
               
146-361
               

               
Cow position:
               
chr6:67617937-67617725 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
47, 7
               

               
Conread position:
               
146-382
               

               
Cow position:
               
chr6:21004686-21004923 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
151, 218
               

               
Conread position:
               
146-382
               

               
Cow position:
               
chr6:59620666-59620902 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
215, 30
               

               
Conread position:
               
146-387
               

               
Cow position:
               
chr6:22215463-22215215 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
42, 8
               

               
Conread position:
               
146-397
               

               
Cow position:
               
chr6:34569421-34569674 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
153, 21
               

               
Conread position:
               
146-407
               

               
Cow position:
               
chr6:30502111-30501853 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
136, 8
               

               
Conread position:
               
146-430
               

               
Cow position:
               
chr6:30123175-30122876 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
43, 7
               

               
Conread position:
               
147-387
               

               
Cow position:
               
chr6:6195095-6194855 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
35, 6
               

               
Conread position:
               
147-431
               

               
Cow position:
               
chr6:10176288-10176012 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
7, 0
               

               
Conread position:
               
148-361
               

               
Cow position:
               
chr6:28089034-28088825 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
48, 0
               

               
Conread position:
               
149-292
               

               
Cow position:
               
chr6:42565703-42565843 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
50, 0
               

               
Conread position:
               
149-360
               

               
Cow position:
               
chr6:28483030-28483238 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
66, 42
               

               
Conread position:
               
149-361
               

               
Cow position:
               
chr6:16700276-16700476 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
50, 0
               

               
Conread position:
               
149-383
               

               
Cow position:
               
chr6:1103724-1103497 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
41, 0
               

               
Conread position:
               
149-383
               

               
Cow position:
               
chr6:32126071-32126295 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
50, 0
               

               
Conread position:
               
149-385
               

               
Cow position:
               
chr6:22850240-22850008 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
148, 50
               

               
Conread position:
               
149-386
               

               
Cow position:
               
chr6:53138923-53138688 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
36, 78
               

               
Conread position:
               
149-387
               

               
Cow position:
               
chr6:14914220-14913988 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
149-408
               

               
Cow position:
               
chr6:6063279-6063023 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
125, 48
               

               
Conread position:
               
150-277
               

               
Cow position:
               
chr6:61142547-61142421 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
129
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
43, 38
               

               
Conread position:
               
150-285
               

               
Cow position:
               
chr6:13053810-13053946 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
1e-20
               

               
Alignm gaps (pig, cow):
               
48, 0
               

               
Conread position:
               
150-291
               

               
Cow position:
               
chr6:60667429-60667565 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
52, 0
               

               
Conread position:
               
150-297
               

               
Cow position:
               
chr6:59069608-59069459 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
94, 49
               

               
Conread position:
               
150-307
               

               
Cow position:
               
chr6:23610958-23611108 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
41, 0
               

               
Conread position:
               
150-338
               

               
Cow position:
               
chr6:61575841-61576013 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
150-341
               

               
Cow position:
               
chr6:6067686-6067502 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
113, 40
               

               
Conread position:
               
150-341
               

               
Cow position:
               
chr6:67323325-67323508 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
104, 49
               

               
Conread position:
               
150-357
               

               
Cow position:
               
chr6:43134923-43134722 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
104, 49
               

               
Conread position:
               
150-361
               

               
Cow position:
               
chr6:5114033-5113825 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
139, 49
               

               
Conread position:
               
150-361
               

               
Cow position:
               
chr6:8161678-8161463 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
42, 123
               

               
Conread position:
               
150-361
               

               
Cow position:
               
chr6:41375788-41375992 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
131, 46
               

               
Conread position:
               
150-361
               

               
Cow position:
               
chr6:61515173-61514976 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
26, 15
               

               
Conread position:
               
150-361
               

               
Cow position:
               
chr6:65535155-65534946 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
93, 46
               

               
Conread position:
               
150-374
               

               
Cow position:
               
chr6:32268868-32268653 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
120, 49
               

               
Conread position:
               
150-379
               

               
Cow position:
               
chr6:37395385-37395161 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
102, 49
               

               
Conread position:
               
150-382
               

               
Cow position:
               
chr6:5845155-5844921 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
212, 49
               

               
Conread position:
               
150-387
               

               
Cow position:
               
chr6:17548958-17548717 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
143, 49
               

               
Conread position:
               
150-387
               

               
Cow position:
               
chr6:23353567-23353807 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
124, 37
               

               
Conread position:
               
150-387
               

               
Cow position:
               
chr6:35319118-35318886 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
103, 49
               

               
Conread position:
               
150-387
               

               
Cow position:
               
chr6:55546159-55545921 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
1e-20
               

               
Alignm gaps (pig, cow):
               
213, 46
               

               
Conread position:
               
150-387
               

               
Cow position:
               
chr6:66947802-66947574 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
207, 47
               

               
Conread position:
               
150-387
               

               
Cow position:
               
chr6:67187699-67187931 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
14, 19
               

               
Conread position:
               
150-387
               

               
Cow position:
               
chr6:67574403-67574638 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
28, 50
               

               
Conread position:
               
150-389
               

               
Cow position:
               
chr6:55282278-55282038 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
95, 40
               

               
Conread position:
               
150-390
               

               
Cow position:
               
chr6:1429656-1429883 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
49, 0
               

               
Conread position:
               
150-402
               

               
Cow position:
               
chr6:9008596-9008362 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
222, 49
               

               
Conread position:
               
150-404
               

               
Cow position:
               
chr6:10225631-10225387 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
143, 49
               

               
Conread position:
               
150-404
               

               
Cow position:
               
chr6:26638397-26638652 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
39, 120
               

               
Conread position:
               
150-409
               

               
Cow position:
               
chr6:30023901-30024144 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
223, 40
               

               
Conread position:
               
150-413
               

               
Cow position:
               
chr6:46462366-46462107 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
87, 45
               

               
Conread position:
               
150-416
               

               
Cow position:
               
chr6:12623531-12623782 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
52, 0
               

               
Conread position:
               
150-429
               

               
Cow position:
               
chr6:22332382-22332103 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
130, 49
               

               
Conread position:
               
151-346
               

               
Cow position:
               
chr6:7801375-7801188 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
153-288
               

               
Cow position:
               
chr6:38218687-38218819 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
132, 53
               

               
Conread position:
               
153-290
               

               
Cow position:
               
chr6:16707034-16707166 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
46, 0
               

               
Conread position:
               
153-292
               

               
Cow position:
               
chr6:63047611-63047748 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
46, 0
               

               
Conread position:
               
153-293
               

               
Cow position:
               
chr6:19131449-19131587 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
153-344
               

               
Cow position:
               
chr6:31865117-31865300 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
28, 0
               

               
Conread position:
               
153-346
               

               
Cow position:
               
chr6:9832225-9832409 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
40, 0
               

               
Conread position:
               
153-348
               

               
Cow position:
               
chr6:40774313-40774125 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
176, 49
               

               
Conread position:
               
153-359
               

               
Cow position:
               
chr6:65903605-65903406 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
167, 46
               

               
Conread position:
               
153-361
               

               
Cow position:
               
chr6:45094585-45094800 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
46, 0
               

               
Conread position:
               
153-376
               

               
Cow position:
               
chr6:19695828-19696045 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
84, 46
               

               
Conread position:
               
153-383
               

               
Cow position:
               
chr6:23532676-23532890 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
220, 35
               

               
Conread position:
               
153-387
               

               
Cow position:
               
chr6:18080496-18080268 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
219, 46
               

               
Conread position:
               
153-387
               

               
Cow position:
               
chr6:28559546-28559788 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
60, 147
               

               
Conread position:
               
153-389
               

               
Cow position:
               
chr6:27239987-27239755 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
49, 0
               

               
Conread position:
               
153-389
               

               
Cow position:
               
chr6:45388344-45388570 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
41, 26
               

               
Conread position:
               
153-394
               

               
Cow position:
               
chr6:50771340-50771106 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
220, 36
               

               
Conread position:
               
153-394
               

               
Cow position:
               
chr6:61631590-61631351 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
104, 46
               

               
Conread position:
               
153-404
               

               
Cow position:
               
chr6:47958834-47959068 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
42, 0
               

               
Conread position:
               
153-419
               

               
Cow position:
               
chr6:61884148-61883892 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
139, 46
               

               
Conread position:
               
154-297
               

               
Cow position:
               
chr6:21235062-21235204 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
154-307
               

               
Cow position:
               
chr6:67214769-67214921 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
147, 45
               

               
Conread position:
               
154-382
               

               
Cow position:
               
chr6:33150272-33150052 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
43, 0
               

               
Conread position:
               
154-382
               

               
Cow position:
               
chr6:62078943-62079164 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
119, 7
               

               
Conread position:
               
154-395
               

               
Cow position:
               
chr6:16288038-16287808 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
207, 39
               

               
Conread position:
               
154-409
               

               
Cow position:
               
chr6:3952538-3952789 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
155-356
               

               
Cow position:
               
chr6:21736864-21736685 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
44, 0
               

               
Conread position:
               
155-381
               

               
Cow position:
               
chr6:60777782-60778015 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
27, 143
               

               
Conread position:
               
155-383
               

               
Cow position:
               
chr6:31847222-31846999 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
36, 19
               

               
Conread position:
               
155-387
               

               
Cow position:
               
chr6:16640779-16641003 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
1e-20
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
155-387
               

               
Cow position:
               
chr6:54127792-54127574 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
44, 0
               

               
Conread position:
               
155-398
               

               
Cow position:
               
chr6:42483436-42483673 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
49, 0
               

               
Conread position:
               
155-406
               

               
Cow position:
               
chr6:18447496-18447250 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
9, 42
               

               
Conread position:
               
155-411
               

               
Cow position:
               
chr6:44867522-44867277 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
156-312
               

               
Cow position:
               
chr6:21066862-21066707 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
156-381
               

               
Cow position:
               
chr6:47174005-47173791 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
206, 18
               

               
Conread position:
               
156-387
               

               
Cow position:
               
chr6:57115097-57115330 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
33, 205
               

               
Conread position:
               
156-387
               

               
Cow position:
               
chr6:66259751-66259983 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
99, 40
               

               
Conread position:
               
156-407
               

               
Cow position:
               
chr6:8365833-8366085 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
117, 43
               

               
Conread position:
               
157-316
               

               
Cow position:
               
chr6:47574929-47575086 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
41, 0
               

               
Conread position:
               
157-361
               

               
Cow position:
               
chr6:15305594-15305793 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
31, 0
               

               
Conread position:
               
157-383
               

               
Cow position:
               
chr6:17068625-17068407 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
197, 33
               

               
Conread position:
               
157-408
               

               
Cow position:
               
chr6:15937832-15937577 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
205, 45
               

               
Conread position:
               
158-381
               

               
Cow position:
               
chr6:66839222-66839434 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
158-387
               

               
Cow position:
               
chr6:54831500-54831725 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
41, 0
               

               
Conread position:
               
158-391
               

               
Cow position:
               
chr6:30825742-30825525 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
215, 39
               

               
Conread position:
               
158-409
               

               
Cow position:
               
chr6:22205003-22204752 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
204, 38
               

               
Conread position:
               
158-410
               

               
Cow position:
               
chr6:16090927-16091169 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
215, 44
               

               
Conread position:
               
159-407
               

               
Cow position:
               
chr6:6201449-6201697 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
95, 37
               

               
Conread position:
               
160-396
               

               
Cow position:
               
chr6:21184195-21183961 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
108, 10
               

               
Conread position:
               
161-292
               

               
Cow position:
               
chr6:28977013-28976884 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
132
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
29, 0
               

               
Conread position:
               
161-355
               

               
Cow position:
               
chr6:62811577-62811766 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
35, 0
               

               
Conread position:
               
161-361
               

               
Cow position:
               
chr6:1871171-1870975 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
132, 31
               

               
Conread position:
               
161-371
               

               
Cow position:
               
chr6:52412888-52413095 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
116, 25
               

               
Conread position:
               
161-376
               

               
Cow position:
               
chr6:54848955-54849172 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
112, 35
               

               
Conread position:
               
161-379
               

               
Cow position:
               
chr6:32867191-32866981 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
48, 16
               

               
Conread position:
               
161-383
               

               
Cow position:
               
chr6:24468369-24468155 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
102, 37
               

               
Conread position:
               
161-384
               

               
Cow position:
               
chr6:29485109-29485329 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
54, 35
               

               
Conread position:
               
161-386
               

               
Cow position:
               
chr6:47782888-47783113 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
113, 35
               

               
Conread position:
               
161-386
               

               
Cow position:
               
chr6:50883651-50883432 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
125, 0
               

               
Conread position:
               
161-387
               

               
Cow position:
               
chr6:47648209-47647988 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
35, 0
               

               
Conread position:
               
161-394
               

               
Cow position:
               
chr6:13687785-13687563 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
161-394
               

               
Cow position:
               
chr6:47520080-47520313 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
84, 27
               

               
Conread position:
               
161-398
               

               
Cow position:
               
chr6:28852000-28852240 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
200, 35
               

               
Conread position:
               
161-399
               

               
Cow position:
               
chr6:42728672-42728910 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
201, 35
               

               
Conread position:
               
161-399
               

               
Cow position:
               
chr6:48282019-48282261 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
121, 38
               

               
Conread position:
               
161-403
               

               
Cow position:
               
chr6:47778902-47779147 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
195, 29
               

               
Conread position:
               
161-404
               

               
Cow position:
               
chr6:50862969-50863209 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
58, 35
               

               
Conread position:
               
161-407
               

               
Cow position:
               
chr6:64429169-64428929 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
35, 0
               

               
Conread position:
               
161-408
               

               
Cow position:
               
chr6:1090607-1090857 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
202, 35
               

               
Conread position:
               
161-409
               

               
Cow position:
               
chr6:14056443-14056200 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
99, 35
               

               
Conread position:
               
162-313
               

               
Cow position:
               
chr6:54864628-54864483 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
112, 29
               

               
Conread position:
               
162-361
               

               
Cow position:
               
chr6:19755054-19754856 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
14, 29
               

               
Conread position:
               
162-407
               

               
Cow position:
               
chr6:16380572-16380812 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
58, 34
               

               
Conread position:
               
163-358
               

               
Cow position:
               
chr6:61978454-61978647 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
163-361
               

               
Cow position:
               
chr6:16261805-16262003 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
10, 35
               

               
Conread position:
               
163-377
               

               
Cow position:
               
chr6:40878806-40879032 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
1e-20
               

               
Alignm gaps (pig, cow):
               
41, 181
               

               
Conread position:
               
163-378
               

               
Cow position:
               
chr6:39414848-39415062 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
32, 24
               

               
Conread position:
               
163-386
               

               
Cow position:
               
chr6:33509818-33510037 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
199, 36
               

               
Conread position:
               
165-297
               

               
Cow position:
               
chr6:60516656-60516785 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
134
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
128, 34
               

               
Conread position:
               
165-341
               

               
Cow position:
               
chr6:59301759-59301581 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
28, 24
               

               
Conread position:
               
165-361
               

               
Cow position:
               
chr6:57295760-57295954 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
165-389
               

               
Cow position:
               
chr6:2623805-2624009 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
28, 22
               

               
Conread position:
               
167-387
               

               
Cow position:
               
chr6:15587562-15587346 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
107, 29
               

               
Conread position:
               
167-393
               

               
Cow position:
               
chr6:23058243-23058468 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
9, 30
               

               
Conread position:
               
168-361
               

               
Cow position:
               
chr6:8369458-8369646 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
31, 0
               

               
Conread position:
               
168-378
               

               
Cow position:
               
chr6:16352320-16352133 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
31, 0
               

               
Conread position:
               
168-387
               

               
Cow position:
               
chr6:22876897-22876682 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
168-395
               

               
Cow position:
               
chr6:53024770-53024556 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
168-399
               

               
Cow position:
               
chr6:12761313-12761546 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
195, 36
               

               
Conread position:
               
168-409
               

               
Cow position:
               
chr6:62707693-62707457 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
137, 28
               

               
Conread position:
               
169-361
               

               
Cow position:
               
chr6:18608777-18608588 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
30, 0
               

               
Conread position:
               
169-361
               

               
Cow position:
               
chr6:48792806-48793002 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
20, 101
               

               
Conread position:
               
169-385
               

               
Cow position:
               
chr6:8468700-8468907 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
193, 21
               

               
Conread position:
               
171-307
               

               
Cow position:
               
chr6:37603599-37603738 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
171-387
               

               
Cow position:
               
chr6:47150853-47151064 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
23, 95
               

               
Conread position:
               
171-421
               

               
Cow position:
               
chr6:29853028-29852775 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
128, 33
               

               
Conread position:
               
172-397
               

               
Cow position:
               
chr6:45921176-45920960 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
106, 27
               

               
Conread position:
               
173-361
               

               
Cow position:
               
chr6:15058415-15058597 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
173-386
               

               
Cow position:
               
chr6:24514507-24514286 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
47, 26
               

               
Conread position:
               
173-386
               

               
Cow position:
               
chr6:59297087-59297297 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
13, 97
               

               
Conread position:
               
173-389
               

               
Cow position:
               
chr6:35743014-35743234 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
20, 147
               

               
Conread position:
               
174-348
               

               
Cow position:
               
chr6:30895953-30895781 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
174-387
               

               
Cow position:
               
chr6:53711442-53711650 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
174-409
               

               
Cow position:
               
chr6:24491068-24491305 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
53, 25
               

               
Conread position:
               
175-371
               

               
Cow position:
               
chr6:14471400-14471597 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
23, 189
               

               
Conread position:
               
175-383
               

               
Cow position:
               
chr6:57072463-57072668 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
197, 24
               

               
Conread position:
               
175-387
               

               
Cow position:
               
chr6:62724596-62724804 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
103, 21
               

               
Conread position:
               
175-408
               

               
Cow position:
               
chr6:56061701-56061930 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
176-308
               

               
Cow position:
               
chr6:19508146-19508016 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
133
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
176-361
               

               
Cow position:
               
chr6:55044600-55044419 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
176-385
               

               
Cow position:
               
chr6:20075835-20076044 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
64, 23
               

               
Conread position:
               
176-387
               

               
Cow position:
               
chr6:24776180-24776390 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
179, 22
               

               
Conread position:
               
176-394
               

               
Cow position:
               
chr6:19936532-19936309 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
11, 91
               

               
Conread position:
               
176-399
               

               
Cow position:
               
chr6:62805682-62805909 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
17, 9
               

               
Conread position:
               
176-401
               

               
Cow position:
               
chr6:6614662-6614891 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
106, 23
               

               
Conread position:
               
177-334
               

               
Cow position:
               
chr6:58076436-58076591 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
177-361
               

               
Cow position:
               
chr6:13742031-13742209 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
177-361
               

               
Cow position:
               
chr6:36163786-36163968 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
76, 22
               

               
Conread position:
               
177-361
               

               
Cow position:
               
chr6:46206340-46206513 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
100, 22
               

               
Conread position:
               
177-378
               

               
Cow position:
               
chr6:19563441-19563240 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
116, 22
               

               
Conread position:
               
177-386
               

               
Cow position:
               
chr6:53765852-53765647 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
9, 74
               

               
Conread position:
               
177-387
               

               
Cow position:
               
chr6:18776289-18776498 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
9, 68
               

               
Conread position:
               
177-387
               

               
Cow position:
               
chr6:36225151-36225362 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
182, 22
               

               
Conread position:
               
177-399
               

               
Cow position:
               
chr6:15974477-15974263 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
209, 22
               

               
Conread position:
               
177-415
               

               
Cow position:
               
chr6:40262225-40262002 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
110, 34
               

               
Conread position:
               
178-358
               

               
Cow position:
               
chr6:5445708-5445887 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
21, 12
               

               
Conread position:
               
178-383
               

               
Cow position:
               
chr6:45980147-45979938 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
8, 90
               

               
Conread position:
               
179-381
               

               
Cow position:
               
chr6:25773171-25772978 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
179-386
               

               
Cow position:
               
chr6:32336069-32336285 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
22, 194
               

               
Conread position:
               
180-361
               

               
Cow position:
               
chr6:47022606-47022781 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
97, 16
               

               
Conread position:
               
180-380
               

               
Cow position:
               
chr6:8187144-8186947 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
180-389
               

               
Cow position:
               
chr6:26408461-26408249 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
182, 208
               

               
Conread position:
               
182-382
               

               
Cow position:
               
chr6:27636362-27636561 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
180, 14
               

               
Conread position:
               
183-359
               

               
Cow position:
               
chr6:17172873-17173048 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
92, 65
               

               
Conread position:
               
183-403
               

               
Cow position:
               
chr6:68246787-68246569 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
99, 86
               

               
Conread position:
               
183-420
               

               
Cow position:
               
chr6:48893883-48893648 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
99, 13
               

               
Conread position:
               
187-386
               

               
Cow position:
               
chr6:58697580-58697384 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
5, 0
               

               
Conread position:
               
189-384
               

               
Cow position:
               
chr6:3936836-3937032 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
14, 5
               

               
Conread position:
               
190-361
               

               
Cow position:
               
chr6:50682244-50682077 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
40, 0
               

               
Conread position:
               
190-423
               

               
Cow position:
               
chr6:18440424-18440191 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
85, 73
               

               
Conread position:
               
191-386
               

               
Cow position:
               
chr6:63168709-63168511 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
114, 18
               

               
Conread position:
               
191-392
               

               
Cow position:
               
chr6:24903524-24903324 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
17, 173
               

               
Conread position:
               
191-393
               

               
Cow position:
               
chr6:32006400-32006205 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
103, 0
               

               
Conread position:
               
192-311
               

               
Cow position:
               
chr6:35654494-35654377 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
120
               

               
Alignm identity:
               
95
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
111, 0
               

               
Conread position:
               
192-322
               

               
Cow position:
               
chr6:53346030-53346159 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
131
               

               
Alignm identity:
               
99
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
93, 0
               

               
Conread position:
               
192-357
               

               
Cow position:
               
chr6:49607448-49607627 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
107, 0
               

               
Conread position:
               
192-361
               

               
Cow position:
               
chr6:26054849-26054678 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
101, 0
               

               
Conread position:
               
192-361
               

               
Cow position:
               
chr6:34380759-34380594 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
107, 52
               

               
Conread position:
               
192-361
               

               
Cow position:
               
chr6:36537305-36537141 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
1e-20
               

               
Alignm gaps (pig, cow):
               
99, 0
               

               
Conread position:
               
192-377
               

               
Cow position:
               
chr6:34722049-34721874 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
153, 51
               

               
Conread position:
               
192-378
               

               
Cow position:
               
chr6:35985081-35984896 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
171, 0
               

               
Conread position:
               
192-378
               

               
Cow position:
               
chr6:60186607-60186413 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
103, 0
               

               
Conread position:
               
192-390
               

               
Cow position:
               
chr6:48448880-48449064 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
192-402
               

               
Cow position:
               
chr6:44540863-44541065 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
1e-20
               

               
Alignm gaps (pig, cow):
               
98, 0
               

               
Conread position:
               
193-359
               

               
Cow position:
               
chr6:34076218-34076383 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
50, 80
               

               
Conread position:
               
193-361
               

               
Cow position:
               
chr6:57299815-57299992 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
102, 0
               

               
Conread position:
               
193-377
               

               
Cow position:
               
chr6:12631558-12631736 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
150, 18
               

               
Conread position:
               
193-379
               

               
Cow position:
               
chr6:36938924-36939118 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
97, 0
               

               
Conread position:
               
193-385
               

               
Cow position:
               
chr6:28562112-28561924 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
77, 0
               

               
Conread position:
               
193-387
               

               
Cow position:
               
chr6:49685875-49686066 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
193-390
               

               
Cow position:
               
chr6:14263834-14263640 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
32, 56
               

               
Conread position:
               
193-398
               

               
Cow position:
               
chr6:21052393-21052184 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
96, 171
               

               
Conread position:
               
193-398
               

               
Cow position:
               
chr6:66293541-66293745 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
179, 142
               

               
Conread position:
               
193-407
               

               
Cow position:
               
chr6:48892303-48892089 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
97, 168
               

               
Conread position:
               
193-409
               

               
Cow position:
               
chr6:30983576-30983780 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
106, 69
               

               
Conread position:
               
193-413
               

               
Cow position:
               
chr6:55014935-55015158 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
70, 77
               

               
Conread position:
               
194-361
               

               
Cow position:
               
chr6:61644801-61644634 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
194-383
               

               
Cow position:
               
chr6:57467654-57467842 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
169, 0
               

               
Conread position:
               
194-386
               

               
Cow position:
               
chr6:33302452-33302647 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
91, 110
               

               
Conread position:
               
194-397
               

               
Cow position:
               
chr6:1173899-1173691 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
1e-20
               

               
Alignm gaps (pig, cow):
               
97, 176
               

               
Conread position:
               
194-404
               

               
Cow position:
               
chr6:45160000-45159789 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
178, 169
               

               
Conread position:
               
194-453
               

               
Cow position:
               
chr6:411158-410902 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
188, 52
               

               
Conread position:
               
195-312
               

               
Cow position:
               
chr6:34512763-34512880 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
119
               

               
Alignm identity:
               
93
               

               
Alignm E-value:
               
1e-20
               

               
Alignm gaps (pig, cow):
               
98, 39
               

               
Conread position:
               
195-385
               

               
Cow position:
               
chr6:17404619-17404813 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
108, 48
               

               
Conread position:
               
195-386
               

               
Cow position:
               
chr6:36570518-36570718 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
104, 0
               

               
Conread position:
               
196-361
               

               
Cow position:
               
chr6:6996839-6996677 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
47, 0
               

               
Conread position:
               
196-361
               

               
Cow position:
               
chr6:54820891-54821056 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
196-390
               

               
Cow position:
               
chr6:6850381-6850583 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
36, 109
               

               
Conread position:
               
197-385
               

               
Cow position:
               
chr6:53811643-53811831 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
102, 167
               

               
Conread position:
               
197-394
               

               
Cow position:
               
chr6:54889660-54889859 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
85, 72
               

               
Conread position:
               
197-423
               

               
Cow position:
               
chr6:34423398-34423174 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
188, 101
               

               
Conread position:
               
197-446
               

               
Cow position:
               
chr6:14383736-14383990 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
108, 60
               

               
Conread position:
               
198-361
               

               
Cow position:
               
chr6:44544087-44543925 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
93, 0
               

               
Conread position:
               
198-378
               

               
Cow position:
               
chr6:24651919-24651742 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
55, 8
               

               
Conread position:
               
198-411
               

               
Cow position:
               
chr6:43906622-43906402 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
77, 67
               

               
Conread position:
               
199-361
               

               
Cow position:
               
chr6:43607191-43607020 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
51, 0
               

               
Conread position:
               
199-375
               

               
Cow position:
               
chr6:40833955-40833781 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
14, 73
               

               
Conread position:
               
201-362
               

               
Cow position:
               
chr6:21350968-21350808 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
110, 40
               

               
Conread position:
               
201-379
               

               
Cow position:
               
chr6:35342117-35341943 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
11, 64
               

               
Conread position:
               
201-443
               

               
Cow position:
               
chr6:50577585-50577817 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
172, 93
               

               
Conread position:
               
202-381
               

               
Cow position:
               
chr6:48278823-48278653 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
171, 99
               

               
Conread position:
               
202-403
               

               
Cow position:
               
chr6:17412501-17412312 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
154, 89
               

               
Conread position:
               
203-395
               

               
Cow position:
               
chr6:14150313-14150120 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
70, 59
               

               
Conread position:
               
204-413
               

               
Cow position:
               
chr6:62224489-62224692 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
82, 121
               

               
Conread position:
               
206-387
               

               
Cow position:
               
chr6:16411680-16411859 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
69, 56
               

               
Conread position:
               
208-394
               

               
Cow position:
               
chr6:55060934-55061128 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
93, 181
               

               
Conread position:
               
213-361
               

               
Cow position:
               
chr6:53732058-53732207 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
65, 53
               

               
Conread position:
               
213-388
               

               
Cow position:
               
chr6:38032934-38033105 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
78, 0
               

               
Conread position:
               
215-382
               

               
Cow position:
               
chr6:7291394-7291558 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
147, 78
               

               
Conread position:
               
215-386
               

               
Cow position:
               
chr6:21175416-21175585 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
148, 80
               

               
Conread position:
               
215-393
               

               
Cow position:
               
chr6:8325875-8326051 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
99, 66
               

               
Conread position:
               
215-400
               

               
Cow position:
               
chr6:34463509-34463330 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
153, 84
               

               
Conread position:
               
215-413
               

               
Cow position:
               
chr6:16137692-16137493 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
64, 149
               

               
Conread position:
               
219-386
               

               
Cow position:
               
chr6:54840425-54840254 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
97, 149
               

               
Conread position:
               
220-389
               

               
Cow position:
               
chr6:54406716-54406552 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
143, 72
               

               
Conread position:
               
221-387
               

               
Cow position:
               
chr6:59101237-59101072 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
142, 0
               

               
Conread position:
               
222-386
               

               
Cow position:
               
chr6:31928722-31928891 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
141, 0
               

               
Conread position:
               
222-390
               

               
Cow position:
               
chr6:37129849-37129683 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
1e-20
               

               
Alignm gaps (pig, cow):
               
120, 81
               

               
Conread position:
               
222-398
               

               
Cow position:
               
chr6:67963970-67963800 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
223-376
               

               
Cow position:
               
chr6:4049066-4048910 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
140, 0
               

               
Conread position:
               
223-400
               

               
Cow position:
               
chr6:36891738-36891911 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
1e-20
               

               
Alignm gaps (pig, cow):
               
73, 113
               

               
Conread position:
               
225-412
               

               
Cow position:
               
chr6:54828234-54828047 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
147, 138
               

               
Conread position:
               
226-403
               

               
Cow position:
               
chr6:16016123-16016296 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
231-361
               

               
Cow position:
               
chr6:23381574-23381444 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
131
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
237-383
               

               
Cow position:
               
chr6:30688411-30688266 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
126, 0
               

               
Conread position:
               
269-378
               

               
Cow position:
               
chr6:38615259-38615370 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
114
               

               
Alignm identity:
               
94
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
93, 34
               

               
Conread position:
               
269-387
               

               
Cow position:
               
chr6:19681846-19681970 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
125
               

               
Alignm identity:
               
99
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
5, 0
               
Show alignments to all cow chromosomes.