Non-Coding RNA Search

Cow genome map


           Conread name:
           rcje38_p18.y1
        

               Conread position:
               1-112
               

               Cow position:
               chr1:12978682-12978793 (view UCSC Genome Browser custom track)
               

               Alignm length:
               112
               

               Alignm identity:
               88
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1-119
               

               Cow position:
               chr1:83618608-83618486 (view UCSC Genome Browser custom track)
               

               Alignm length:
               123
               

               Alignm identity:
               97
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               56, 0
               

               Conread position:
               1-120
               

               Cow position:
               chr1:85028953-85029073 (view UCSC Genome Browser custom track)
               

               Alignm length:
               121
               

               Alignm identity:
               97
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               57, 0
               

               Conread position:
               1-120
               

               Cow position:
               chr1:89349965-89350084 (view UCSC Genome Browser custom track)
               

               Alignm length:
               120
               

               Alignm identity:
               98
               

               Alignm E-value:
               8e-27
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1-125
               

               Cow position:
               chr1:42537323-42537198 (view UCSC Genome Browser custom track)
               

               Alignm length:
               127
               

               Alignm identity:
               99
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               51, 87
               

               Conread position:
               1-132
               

               Cow position:
               chr1:93044021-93044148 (view UCSC Genome Browser custom track)
               

               Alignm length:
               132
               

               Alignm identity:
               107
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               25, 0
               

               Conread position:
               1-134
               

               Cow position:
               chr1:69481948-69481817 (view UCSC Genome Browser custom track)
               

               Alignm length:
               134
               

               Alignm identity:
               102
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               108, 0
               

               Conread position:
               1-134
               

               Cow position:
               chr1:91874912-91874784 (view UCSC Genome Browser custom track)
               

               Alignm length:
               134
               

               Alignm identity:
               104
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               56, 0
               

               Conread position:
               1-135
               

               Cow position:
               chr1:62036802-62036937 (view UCSC Genome Browser custom track)
               

               Alignm length:
               136
               

               Alignm identity:
               110
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               123, 0
               

               Conread position:
               1-136
               

               Cow position:
               chr1:92369736-92369869 (view UCSC Genome Browser custom track)
               

               Alignm length:
               139
               

               Alignm identity:
               108
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               31, 56
               

               Conread position:
               1-137
               

               Cow position:
               chr1:84255767-84255903 (view UCSC Genome Browser custom track)
               

               Alignm length:
               138
               

               Alignm identity:
               112
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               61, 52
               

               Conread position:
               1-138
               

               Cow position:
               chr1:44269091-44269225 (view UCSC Genome Browser custom track)
               

               Alignm length:
               139
               

               Alignm identity:
               109
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               92, 43
               

               Conread position:
               1-140
               

               Cow position:
               chr1:52995024-52995165 (view UCSC Genome Browser custom track)
               

               Alignm length:
               142
               

               Alignm identity:
               106
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               77, 0
               

               Conread position:
               1-141
               

               Cow position:
               chr1:8670773-8670912 (view UCSC Genome Browser custom track)
               

               Alignm length:
               142
               

               Alignm identity:
               106
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               92, 85
               

               Conread position:
               1-141
               

               Cow position:
               chr1:50991933-50992072 (view UCSC Genome Browser custom track)
               

               Alignm length:
               141
               

               Alignm identity:
               111
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               116, 0
               

               Conread position:
               1-141
               

               Cow position:
               chr1:74822447-74822593 (view UCSC Genome Browser custom track)
               

               Alignm length:
               147
               

               Alignm identity:
               115
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               78, 0
               

               Conread position:
               1-141
               

               Cow position:
               chr1:81580178-81580317 (view UCSC Genome Browser custom track)
               

               Alignm length:
               141
               

               Alignm identity:
               113
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               48, 0
               

               Conread position:
               1-141
               

               Cow position:
               chr1:81613389-81613530 (view UCSC Genome Browser custom track)
               

               Alignm length:
               142
               

               Alignm identity:
               116
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               130, 0
               

               Conread position:
               1-141
               

               Cow position:
               chr1:86912440-86912580 (view UCSC Genome Browser custom track)
               

               Alignm length:
               141
               

               Alignm identity:
               104
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1-141
               

               Cow position:
               chr1:97750619-97750479 (view UCSC Genome Browser custom track)
               

               Alignm length:
               141
               

               Alignm identity:
               106
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1-141
               

               Cow position:
               chr1:98551720-98551859 (view UCSC Genome Browser custom track)
               

               Alignm length:
               141
               

               Alignm identity:
               112
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               100, 0
               

               Conread position:
               1-142
               

               Cow position:
               chr1:83783930-83783790 (view UCSC Genome Browser custom track)
               

               Alignm length:
               142
               

               Alignm identity:
               109
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               121, 0
               

               Conread position:
               1-146
               

               Cow position:
               chr1:80841646-80841791 (view UCSC Genome Browser custom track)
               

               Alignm length:
               146
               

               Alignm identity:
               116
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1-148
               

               Cow position:
               chr1:39510058-39509911 (view UCSC Genome Browser custom track)
               

               Alignm length:
               148
               

               Alignm identity:
               107
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1-151
               

               Cow position:
               chr1:89341986-89341832 (view UCSC Genome Browser custom track)
               

               Alignm length:
               157
               

               Alignm identity:
               125
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               26, 129
               

               Conread position:
               1-162
               

               Cow position:
               chr1:19962053-19962209 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               126
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               43, 0
               

               Conread position:
               1-162
               

               Cow position:
               chr1:52039638-52039793 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               127
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               48, 0
               

               Conread position:
               1-169
               

               Cow position:
               chr1:69694992-69694831 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               124
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               15, 32
               

               Conread position:
               1-176
               

               Cow position:
               chr1:96277052-96276879 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               132
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               31, 45
               

               Conread position:
               1-178
               

               Cow position:
               chr1:53397975-53398149 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               134
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               124, 0
               

               Conread position:
               1-182
               

               Cow position:
               chr1:65028534-65028701 (view UCSC Genome Browser custom track)
               

               Alignm length:
               182
               

               Alignm identity:
               137
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               105, 0
               

               Conread position:
               1-186
               

               Cow position:
               chr1:78096927-78097110 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               145
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               123, 0
               

               Conread position:
               1-187
               

               Cow position:
               chr1:71078960-71078777 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               148
               

               Alignm E-value:
               4.00001e-40
               

               Alignm gaps (pig, cow):
               110, 0
               

               Conread position:
               1-189
               

               Cow position:
               chr1:6031624-6031814 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               129
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               133, 0
               

               Conread position:
               1-194
               

               Cow position:
               chr1:98511927-98512133 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               155
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               131, 93
               

               Conread position:
               1-195
               

               Cow position:
               chr1:80311449-80311649 (view UCSC Genome Browser custom track)
               

               Alignm length:
               207
               

               Alignm identity:
               148
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               102, 32
               

               Conread position:
               1-195
               

               Cow position:
               chr1:85772009-85772198 (view UCSC Genome Browser custom track)
               

               Alignm length:
               196
               

               Alignm identity:
               141
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               152, 99
               

               Conread position:
               1-196
               

               Cow position:
               chr1:11729175-11729365 (view UCSC Genome Browser custom track)
               

               Alignm length:
               197
               

               Alignm identity:
               139
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               192, 134
               

               Conread position:
               1-196
               

               Cow position:
               chr1:31855247-31855036 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               165
               

               Alignm E-value:
               7e-36
               

               Alignm gaps (pig, cow):
               121, 202
               

               Conread position:
               1-196
               

               Cow position:
               chr1:45223581-45223769 (view UCSC Genome Browser custom track)
               

               Alignm length:
               196
               

               Alignm identity:
               139
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               122, 0
               

               Conread position:
               1-196
               

               Cow position:
               chr1:64113791-64113607 (view UCSC Genome Browser custom track)
               

               Alignm length:
               197
               

               Alignm identity:
               144
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               86, 117
               

               Conread position:
               1-197
               

               Cow position:
               chr1:53622958-53623148 (view UCSC Genome Browser custom track)
               

               Alignm length:
               198
               

               Alignm identity:
               148
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               141, 34
               

               Conread position:
               1-197
               

               Cow position:
               chr1:100762077-100762268 (view UCSC Genome Browser custom track)
               

               Alignm length:
               198
               

               Alignm identity:
               148
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               61, 33
               

               Conread position:
               1-199
               

               Cow position:
               chr1:37726419-37726218 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               142
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               105, 8
               

               Conread position:
               1-202
               

               Cow position:
               chr1:261479-261265 (view UCSC Genome Browser custom track)
               

               Alignm length:
               217
               

               Alignm identity:
               164
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               43, 173
               

               Conread position:
               1-202
               

               Cow position:
               chr1:72813616-72813817 (view UCSC Genome Browser custom track)
               

               Alignm length:
               205
               

               Alignm identity:
               145
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               125, 162
               

               Conread position:
               1-202
               

               Cow position:
               chr1:81481382-81481186 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               163
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               125, 0
               

               Conread position:
               1-202
               

               Cow position:
               chr1:101280734-101280539 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               148
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               41, 0
               

               Conread position:
               1-203
               

               Cow position:
               chr1:759418-759212 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               169
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               123, 190
               

               Conread position:
               1-203
               

               Cow position:
               chr1:6381772-6381976 (view UCSC Genome Browser custom track)
               

               Alignm length:
               207
               

               Alignm identity:
               148
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               130, 82
               

               Conread position:
               1-203
               

               Cow position:
               chr1:24530502-24530698 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               154
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               7, 0
               

               Conread position:
               1-203
               

               Cow position:
               chr1:24777989-24777784 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               155
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               122, 32
               

               Conread position:
               1-203
               

               Cow position:
               chr1:30983492-30983292 (view UCSC Genome Browser custom track)
               

               Alignm length:
               207
               

               Alignm identity:
               149
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               98, 19
               

               Conread position:
               1-203
               

               Cow position:
               chr1:41027075-41027272 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               162
               

               Alignm E-value:
               5.04467e-44
               

               Alignm gaps (pig, cow):
               38, 0
               

               Conread position:
               1-203
               

               Cow position:
               chr1:45555366-45555565 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               155
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               100, 0
               

               Conread position:
               1-203
               

               Cow position:
               chr1:48105430-48105225 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               169
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               125, 11
               

               Conread position:
               1-203
               

               Cow position:
               chr1:49980710-49980908 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               149
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               58, 0
               

               Conread position:
               1-203
               

               Cow position:
               chr1:63079010-63079201 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               148
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               52, 0
               

               Conread position:
               1-203
               

               Cow position:
               chr1:63530558-63530759 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               136
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               184, 0
               

               Conread position:
               1-203
               

               Cow position:
               chr1:76735478-76735279 (view UCSC Genome Browser custom track)
               

               Alignm length:
               209
               

               Alignm identity:
               148
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               121, 41
               

               Conread position:
               1-203
               

               Cow position:
               chr1:89448900-89449098 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               161
               

               Alignm E-value:
               5.04467e-44
               

               Alignm gaps (pig, cow):
               125, 0
               

               Conread position:
               1-203
               

               Cow position:
               chr1:100573627-100573428 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               157
               

               Alignm E-value:
               4.00001e-41
               

               Alignm gaps (pig, cow):
               123, 0
               

               Conread position:
               1-204
               

               Cow position:
               chr1:79146817-79146613 (view UCSC Genome Browser custom track)
               

               Alignm length:
               209
               

               Alignm identity:
               158
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               148, 56
               

               Conread position:
               1-206
               

               Cow position:
               chr1:46143461-46143264 (view UCSC Genome Browser custom track)
               

               Alignm length:
               207
               

               Alignm identity:
               165
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               174, 43
               

               Conread position:
               1-206
               

               Cow position:
               chr1:100474234-100474442 (view UCSC Genome Browser custom track)
               

               Alignm length:
               210
               

               Alignm identity:
               155
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               127, 189
               

               Conread position:
               1-207
               

               Cow position:
               chr1:42541598-42541795 (view UCSC Genome Browser custom track)
               

               Alignm length:
               207
               

               Alignm identity:
               148
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               122, 0
               

               Conread position:
               1-207
               

               Cow position:
               chr1:43855301-43855493 (view UCSC Genome Browser custom track)
               

               Alignm length:
               207
               

               Alignm identity:
               153
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               42, 0
               

               Conread position:
               1-207
               

               Cow position:
               chr1:51860561-51860360 (view UCSC Genome Browser custom track)
               

               Alignm length:
               207
               

               Alignm identity:
               147
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               125, 0
               

               Conread position:
               1-207
               

               Cow position:
               chr1:60044988-60045191 (view UCSC Genome Browser custom track)
               

               Alignm length:
               209
               

               Alignm identity:
               147
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               125, 41
               

               Conread position:
               1-207
               

               Cow position:
               chr1:73551510-73551298 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               153
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               69, 192
               

               Conread position:
               1-208
               

               Cow position:
               chr1:242557-242757 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               143
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               123, 0
               

               Conread position:
               1-208
               

               Cow position:
               chr1:1956333-1956133 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               157
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               52, 0
               

               Conread position:
               1-208
               

               Cow position:
               chr1:7739948-7740148 (view UCSC Genome Browser custom track)
               

               Alignm length:
               209
               

               Alignm identity:
               145
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               174, 43
               

               Conread position:
               1-208
               

               Cow position:
               chr1:20667742-20667545 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               153
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               104, 0
               

               Conread position:
               1-208
               

               Cow position:
               chr1:22729056-22729259 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               155
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               141, 0
               

               Conread position:
               1-208
               

               Cow position:
               chr1:22730734-22730938 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               143
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               113, 0
               

               Conread position:
               1-208
               

               Cow position:
               chr1:25383669-25383874 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               168
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               9, 0
               

               Conread position:
               1-208
               

               Cow position:
               chr1:26895811-26895607 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               146
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               122, 0
               

               Conread position:
               1-208
               

               Cow position:
               chr1:34771503-34771294 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               150
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               123, 184
               

               Conread position:
               1-208
               

               Cow position:
               chr1:43499296-43499105 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               153
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               100, 0
               

               Conread position:
               1-208
               

               Cow position:
               chr1:43505529-43505729 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               164
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               123, 0
               

               Conread position:
               1-208
               

               Cow position:
               chr1:48618244-48618042 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               165
               

               Alignm E-value:
               5.60519e-45
               

               Alignm gaps (pig, cow):
               136, 0
               

               Conread position:
               1-208
               

               Cow position:
               chr1:55428957-55428748 (view UCSC Genome Browser custom track)
               

               Alignm length:
               211
               

               Alignm identity:
               150
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               21, 188
               

               Conread position:
               1-208
               

               Cow position:
               chr1:55705246-55705042 (view UCSC Genome Browser custom track)
               

               Alignm length:
               211
               

               Alignm identity:
               162
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               58, 126
               

               Conread position:
               1-208
               

               Cow position:
               chr1:59518922-59519116 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               154
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               32, 0
               

               Conread position:
               1-208
               

               Cow position:
               chr1:64572515-64572719 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               156
               

               Alignm E-value:
               9e-38
               

               Alignm gaps (pig, cow):
               115, 0
               

               Conread position:
               1-208
               

               Cow position:
               chr1:68817797-68817596 (view UCSC Genome Browser custom track)
               

               Alignm length:
               209
               

               Alignm identity:
               163
               

               Alignm E-value:
               4.00001e-40
               

               Alignm gaps (pig, cow):
               32, 44
               

               Conread position:
               1-208
               

               Cow position:
               chr1:74956017-74955827 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               148
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               32, 0
               

               Conread position:
               1-208
               

               Cow position:
               chr1:79844465-79844684 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               170
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               128, 198
               

               Conread position:
               1-208
               

               Cow position:
               chr1:88359878-88360090 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               157
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               129, 190
               

               Conread position:
               1-208
               

               Cow position:
               chr1:89388340-89388548 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               172
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               21, 127
               

               Conread position:
               1-208
               

               Cow position:
               chr1:91066151-91065952 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               150
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               62, 0
               

               Conread position:
               1-209
               

               Cow position:
               chr1:6731180-6731385 (view UCSC Genome Browser custom track)
               

               Alignm length:
               209
               

               Alignm identity:
               162
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               125, 0
               

               Conread position:
               1-209
               

               Cow position:
               chr1:10633046-10633246 (view UCSC Genome Browser custom track)
               

               Alignm length:
               209
               

               Alignm identity:
               160
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               116, 0
               

               Conread position:
               1-209
               

               Cow position:
               chr1:16061004-16060802 (view UCSC Genome Browser custom track)
               

               Alignm length:
               210
               

               Alignm identity:
               154
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               104, 94
               

               Conread position:
               1-209
               

               Cow position:
               chr1:101714120-101714322 (view UCSC Genome Browser custom track)
               

               Alignm length:
               209
               

               Alignm identity:
               154
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               31, 0
               

               Conread position:
               1-210
               

               Cow position:
               chr1:8128968-8128771 (view UCSC Genome Browser custom track)
               

               Alignm length:
               211
               

               Alignm identity:
               154
               

               Alignm E-value:
               8e-27
               

               Alignm gaps (pig, cow):
               200, 109
               

               Conread position:
               1-210
               

               Cow position:
               chr1:45575933-45576127 (view UCSC Genome Browser custom track)
               

               Alignm length:
               210
               

               Alignm identity:
               155
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               116, 0
               

               Conread position:
               1-210
               

               Cow position:
               chr1:65318575-65318786 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               159
               

               Alignm E-value:
               6e-35
               

               Alignm gaps (pig, cow):
               128, 102
               

               Conread position:
               1-211
               

               Cow position:
               chr1:8287630-8287422 (view UCSC Genome Browser custom track)
               

               Alignm length:
               211
               

               Alignm identity:
               151
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               94, 0
               

               Conread position:
               1-212
               

               Cow position:
               chr1:22827157-22827360 (view UCSC Genome Browser custom track)
               

               Alignm length:
               217
               

               Alignm identity:
               156
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               61, 101
               

               Conread position:
               1-212
               

               Cow position:
               chr1:56618650-56618447 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               162
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               65, 0
               

               Conread position:
               1-212
               

               Cow position:
               chr1:62997799-62998011 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               160
               

               Alignm E-value:
               7e-36
               

               Alignm gaps (pig, cow):
               124, 43
               

               Conread position:
               1-212
               

               Cow position:
               chr1:77739722-77739933 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               152
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               125, 94
               

               Conread position:
               1-214
               

               Cow position:
               chr1:34159835-34160039 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               150
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               65, 126
               

               Conread position:
               1-215
               

               Cow position:
               chr1:49825066-49824853 (view UCSC Genome Browser custom track)
               

               Alignm length:
               217
               

               Alignm identity:
               157
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               22, 118
               

               Conread position:
               1-215
               

               Cow position:
               chr1:64302244-64302037 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               163
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               55, 43
               

               Conread position:
               1-216
               

               Cow position:
               chr1:67654320-67654112 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               171
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               120, 0
               

               Conread position:
               1-217
               

               Cow position:
               chr1:57089679-57089465 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               156
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               125, 84
               

               Conread position:
               1-219
               

               Cow position:
               chr1:10674151-10674362 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               155
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               45, 101
               

               Conread position:
               1-219
               

               Cow position:
               chr1:37321998-37321793 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               176
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               174, 43
               

               Conread position:
               1-220
               

               Cow position:
               chr1:52912897-52912675 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               172
               

               Alignm E-value:
               3.99931e-42
               

               Alignm gaps (pig, cow):
               123, 71
               

               Conread position:
               1-220
               

               Cow position:
               chr1:55753215-55753002 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               166
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               18, 0
               

               Conread position:
               1-220
               

               Cow position:
               chr1:96558849-96558629 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               163
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               133, 185
               

               Conread position:
               1-221
               

               Cow position:
               chr1:7965853-7966066 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               173
               

               Alignm E-value:
               5.00264e-43
               

               Alignm gaps (pig, cow):
               213, 23
               

               Conread position:
               1-221
               

               Cow position:
               chr1:10778563-10778773 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               160
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               202, 123
               

               Conread position:
               1-221
               

               Cow position:
               chr1:22035611-22035824 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               158
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               102, 93
               

               Conread position:
               1-221
               

               Cow position:
               chr1:24133060-24132842 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               186
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               204, 43
               

               Conread position:
               1-221
               

               Cow position:
               chr1:24542570-24542350 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               160
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               70, 55
               

               Conread position:
               1-221
               

               Cow position:
               chr1:66898498-66898275 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               152
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               103, 188
               

               Conread position:
               1-221
               

               Cow position:
               chr1:68688583-68688797 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               167
               

               Alignm E-value:
               4.00001e-40
               

               Alignm gaps (pig, cow):
               121, 0
               

               Conread position:
               1-221
               

               Cow position:
               chr1:90621506-90621288 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               178
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               61, 153
               

               Conread position:
               1-221
               

               Cow position:
               chr1:100852709-100852918 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               176
               

               Alignm E-value:
               5.60519e-45
               

               Alignm gaps (pig, cow):
               136, 0
               

               Conread position:
               1-221
               

               Cow position:
               chr1:102768181-102768395 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               162
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               203, 30
               

               Conread position:
               1-222
               

               Cow position:
               chr1:3583844-3583608 (view UCSC Genome Browser custom track)
               

               Alignm length:
               240
               

               Alignm identity:
               172
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               48, 19
               

               Conread position:
               1-222
               

               Cow position:
               chr1:54258567-54258788 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               164
               

               Alignm E-value:
               8e-37
               

               Alignm gaps (pig, cow):
               125, 67
               

               Conread position:
               1-222
               

               Cow position:
               chr1:69539691-69539902 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               158
               

               Alignm E-value:
               9e-28
               

               Alignm gaps (pig, cow):
               116, 0
               

               Conread position:
               1-222
               

               Cow position:
               chr1:85688178-85688405 (view UCSC Genome Browser custom track)
               

               Alignm length:
               232
               

               Alignm identity:
               159
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               121, 76
               

               Conread position:
               1-222
               

               Cow position:
               chr1:89509921-89509712 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               170
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               116, 0
               

               Conread position:
               1-223
               

               Cow position:
               chr1:61884913-61885132 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               172
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               111, 0
               

               Conread position:
               1-223
               

               Cow position:
               chr1:70175539-70175321 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               168
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               61, 116
               

               Conread position:
               1-224
               

               Cow position:
               chr1:635685-635464 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               151
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               51, 41
               

               Conread position:
               1-224
               

               Cow position:
               chr1:37886806-37886581 (view UCSC Genome Browser custom track)
               

               Alignm length:
               232
               

               Alignm identity:
               163
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               124, 25
               

               Conread position:
               1-224
               

               Cow position:
               chr1:45315636-45315410 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               181
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               139, 189
               

               Conread position:
               1-224
               

               Cow position:
               chr1:54156734-54156508 (view UCSC Genome Browser custom track)
               

               Alignm length:
               230
               

               Alignm identity:
               171
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               109, 48
               

               Conread position:
               1-224
               

               Cow position:
               chr1:74084188-74083969 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               164
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               98, 36
               

               Conread position:
               1-224
               

               Cow position:
               chr1:98912008-98912230 (view UCSC Genome Browser custom track)
               

               Alignm length:
               230
               

               Alignm identity:
               171
               

               Alignm E-value:
               6e-34
               

               Alignm gaps (pig, cow):
               120, 48
               

               Conread position:
               1-225
               

               Cow position:
               chr1:12222607-12222383 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               154
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               112, 93
               

               Conread position:
               1-225
               

               Cow position:
               chr1:21681537-21681311 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               153
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               123, 186
               

               Conread position:
               1-225
               

               Cow position:
               chr1:40212332-40212125 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               177
               

               Alignm E-value:
               9e-38
               

               Alignm gaps (pig, cow):
               174, 41
               

               Conread position:
               1-225
               

               Cow position:
               chr1:67529055-67529278 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               158
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               221, 185
               

               Conread position:
               1-225
               

               Cow position:
               chr1:79630902-79630696 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               182
               

               Alignm E-value:
               4.00001e-41
               

               Alignm gaps (pig, cow):
               194, 19
               

               Conread position:
               1-225
               

               Cow position:
               chr1:89381275-89381497 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               171
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               216, 136
               

               Conread position:
               1-225
               

               Cow position:
               chr1:99642367-99642141 (view UCSC Genome Browser custom track)
               

               Alignm length:
               230
               

               Alignm identity:
               160
               

               Alignm E-value:
               9e-28
               

               Alignm gaps (pig, cow):
               193, 17
               

               Conread position:
               1-226
               

               Cow position:
               chr1:86113400-86113170 (view UCSC Genome Browser custom track)
               

               Alignm length:
               233
               

               Alignm identity:
               162
               

               Alignm E-value:
               8e-27
               

               Alignm gaps (pig, cow):
               104, 98
               

               Conread position:
               1-226
               

               Cow position:
               chr1:102266268-102266049 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               153
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               120, 0
               

               Conread position:
               1-227
               

               Cow position:
               chr1:31795005-31794785 (view UCSC Genome Browser custom track)
               

               Alignm length:
               230
               

               Alignm identity:
               164
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               98, 42
               

               Conread position:
               1-227
               

               Cow position:
               chr1:36688378-36688155 (view UCSC Genome Browser custom track)
               

               Alignm length:
               230
               

               Alignm identity:
               157
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               135, 93
               

               Conread position:
               1-227
               

               Cow position:
               chr1:92032607-92032375 (view UCSC Genome Browser custom track)
               

               Alignm length:
               239
               

               Alignm identity:
               166
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               88, 104
               

               Conread position:
               1-227
               

               Cow position:
               chr1:101507360-101507573 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               163
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               94, 0
               

               Conread position:
               1-228
               

               Cow position:
               chr1:15206872-15206655 (view UCSC Genome Browser custom track)
               

               Alignm length:
               232
               

               Alignm identity:
               163
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               132, 71
               

               Conread position:
               1-228
               

               Cow position:
               chr1:21561012-21561242 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               161
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               116, 192
               

               Conread position:
               1-228
               

               Cow position:
               chr1:23998934-23998699 (view UCSC Genome Browser custom track)
               

               Alignm length:
               240
               

               Alignm identity:
               175
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               109, 65
               

               Conread position:
               1-228
               

               Cow position:
               chr1:52435272-52435501 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               155
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               130, 178
               

               Conread position:
               1-228
               

               Cow position:
               chr1:81515233-81515461 (view UCSC Genome Browser custom track)
               

               Alignm length:
               233
               

               Alignm identity:
               158
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               126, 190
               

               Conread position:
               1-228
               

               Cow position:
               chr1:86110737-86110517 (view UCSC Genome Browser custom track)
               

               Alignm length:
               232
               

               Alignm identity:
               182
               

               Alignm E-value:
               5.00264e-43
               

               Alignm gaps (pig, cow):
               124, 48
               

               Conread position:
               1-229
               

               Cow position:
               chr1:10942094-10941870 (view UCSC Genome Browser custom track)
               

               Alignm length:
               232
               

               Alignm identity:
               160
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               110, 81
               

               Conread position:
               1-229
               

               Cow position:
               chr1:10964292-10964516 (view UCSC Genome Browser custom track)
               

               Alignm length:
               232
               

               Alignm identity:
               161
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               110, 81
               

               Conread position:
               1-229
               

               Cow position:
               chr1:23186798-23186578 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               153
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               58, 0
               

               Conread position:
               1-229
               

               Cow position:
               chr1:51445888-51446108 (view UCSC Genome Browser custom track)
               

               Alignm length:
               230
               

               Alignm identity:
               168
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               206, 13
               

               Conread position:
               1-229
               

               Cow position:
               chr1:53452537-53452747 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               174
               

               Alignm E-value:
               7e-36
               

               Alignm gaps (pig, cow):
               73, 0
               

               Conread position:
               1-229
               

               Cow position:
               chr1:64804102-64803872 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               170
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               98, 93
               

               Conread position:
               1-229
               

               Cow position:
               chr1:71665932-71665710 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               163
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               125, 96
               

               Conread position:
               1-229
               

               Cow position:
               chr1:78838796-78839011 (view UCSC Genome Browser custom track)
               

               Alignm length:
               230
               

               Alignm identity:
               168
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               202, 32
               

               Conread position:
               1-229
               

               Cow position:
               chr1:81390922-81391149 (view UCSC Genome Browser custom track)
               

               Alignm length:
               233
               

               Alignm identity:
               160
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               109, 72
               

               Conread position:
               1-229
               

               Cow position:
               chr1:87197820-87198054 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               189
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               179, 132
               

               Conread position:
               1-229
               

               Cow position:
               chr1:95835798-95835568 (view UCSC Genome Browser custom track)
               

               Alignm length:
               233
               

               Alignm identity:
               168
               

               Alignm E-value:
               6e-35
               

               Alignm gaps (pig, cow):
               125, 187
               

               Conread position:
               1-229
               

               Cow position:
               chr1:97794547-97794323 (view UCSC Genome Browser custom track)
               

               Alignm length:
               233
               

               Alignm identity:
               164
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               98, 25
               

               Conread position:
               1-229
               

               Cow position:
               chr1:101177515-101177750 (view UCSC Genome Browser custom track)
               

               Alignm length:
               238
               

               Alignm identity:
               162
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               76, 72
               

               Conread position:
               1-229
               

               Cow position:
               chr1:102306140-102305924 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               169
               

               Alignm E-value:
               6e-34
               

               Alignm gaps (pig, cow):
               23, 0
               

               Conread position:
               1-230
               

               Cow position:
               chr1:43352654-43352422 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               176
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               125, 34
               

               Conread position:
               1-230
               

               Cow position:
               chr1:72068835-72068605 (view UCSC Genome Browser custom track)
               

               Alignm length:
               233
               

               Alignm identity:
               164
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               98, 188
               

               Conread position:
               1-230
               

               Cow position:
               chr1:90904756-90904529 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               175
               

               Alignm E-value:
               5.04467e-44
               

               Alignm gaps (pig, cow):
               214, 123
               

               Conread position:
               1-231
               

               Cow position:
               chr1:43311772-43311540 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               164
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               82, 207
               

               Conread position:
               1-231
               

               Cow position:
               chr1:49334392-49334161 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               167
               

               Alignm E-value:
               9e-28
               

               Alignm gaps (pig, cow):
               99, 28
               

               Conread position:
               1-231
               

               Cow position:
               chr1:53370085-53370314 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               165
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               125, 34
               

               Conread position:
               1-231
               

               Cow position:
               chr1:73020662-73020438 (view UCSC Genome Browser custom track)
               

               Alignm length:
               233
               

               Alignm identity:
               160
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               125, 185
               

               Conread position:
               1-231
               

               Cow position:
               chr1:81228334-81228102 (view UCSC Genome Browser custom track)
               

               Alignm length:
               238
               

               Alignm identity:
               163
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               63, 95
               

               Conread position:
               1-232
               

               Cow position:
               chr1:44506973-44507195 (view UCSC Genome Browser custom track)
               

               Alignm length:
               232
               

               Alignm identity:
               159
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               112, 0
               

               Conread position:
               1-233
               

               Cow position:
               chr1:95152871-95153107 (view UCSC Genome Browser custom track)
               

               Alignm length:
               238
               

               Alignm identity:
               172
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               133, 186
               

               Conread position:
               1-234
               

               Cow position:
               chr1:70538611-70538837 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               174
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               121, 0
               

               Conread position:
               1-234
               

               Cow position:
               chr1:72422408-72422175 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               164
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               126, 64
               

               Conread position:
               1-235
               

               Cow position:
               chr1:20871559-20871323 (view UCSC Genome Browser custom track)
               

               Alignm length:
               239
               

               Alignm identity:
               168
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               98, 92
               

               Conread position:
               1-237
               

               Cow position:
               chr1:84104061-84103824 (view UCSC Genome Browser custom track)
               

               Alignm length:
               239
               

               Alignm identity:
               161
               

               Alignm E-value:
               9e-28
               

               Alignm gaps (pig, cow):
               126, 187
               

               Conread position:
               1-241
               

               Cow position:
               chr1:61005562-61005319 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               190
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               126, 58
               

               Conread position:
               1-248
               

               Cow position:
               chr1:8788291-8788532 (view UCSC Genome Browser custom track)
               

               Alignm length:
               252
               

               Alignm identity:
               179
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               91, 118
               

               Conread position:
               1-248
               

               Cow position:
               chr1:88913320-88913564 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               192
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               58, 0
               

               Conread position:
               2-130
               

               Cow position:
               chr1:5135709-5135580 (view UCSC Genome Browser custom track)
               

               Alignm length:
               130
               

               Alignm identity:
               108
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               111, 0
               

               Conread position:
               2-203
               

               Cow position:
               chr1:95049863-95049665 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               144
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               134, 33
               

               Conread position:
               2-208
               

               Cow position:
               chr1:34731044-34731254 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               145
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               16, 93
               

               Conread position:
               2-227
               

               Cow position:
               chr1:41022422-41022640 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               161
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               10, 0
               

               Conread position:
               3-138
               

               Cow position:
               chr1:53640717-53640849 (view UCSC Genome Browser custom track)
               

               Alignm length:
               136
               

               Alignm identity:
               106
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               53, 0
               

               Conread position:
               3-187
               

               Cow position:
               chr1:69940821-69940639 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               129
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               113, 0
               

               Conread position:
               3-203
               

               Cow position:
               chr1:27463138-27463328 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               142
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               25, 0
               

               Conread position:
               3-208
               

               Cow position:
               chr1:3923798-3923599 (view UCSC Genome Browser custom track)
               

               Alignm length:
               206
               

               Alignm identity:
               154
               

               Alignm E-value:
               6e-35
               

               Alignm gaps (pig, cow):
               121, 0
               

               Conread position:
               3-208
               

               Cow position:
               chr1:50930973-50930775 (view UCSC Genome Browser custom track)
               

               Alignm length:
               206
               

               Alignm identity:
               153
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               17, 0
               

               Conread position:
               3-212
               

               Cow position:
               chr1:37706968-37706760 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               157
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               114, 39
               

               Conread position:
               3-213
               

               Cow position:
               chr1:15102891-15103094 (view UCSC Genome Browser custom track)
               

               Alignm length:
               211
               

               Alignm identity:
               159
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               13, 0
               

               Conread position:
               3-221
               

               Cow position:
               chr1:25022073-25021859 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               157
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               202, 121
               

               Conread position:
               3-225
               

               Cow position:
               chr1:42774913-42775128 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               170
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               113, 18
               

               Conread position:
               3-226
               

               Cow position:
               chr1:22192771-22192996 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               170
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               128, 139
               

               Conread position:
               3-228
               

               Cow position:
               chr1:852172-852399 (view UCSC Genome Browser custom track)
               

               Alignm length:
               230
               

               Alignm identity:
               157
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               107, 91
               

               Conread position:
               3-229
               

               Cow position:
               chr1:76613133-76612905 (view UCSC Genome Browser custom track)
               

               Alignm length:
               230
               

               Alignm identity:
               160
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               123, 185
               

               Conread position:
               3-232
               

               Cow position:
               chr1:61741965-61741741 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               182
               

               Alignm E-value:
               4.00001e-40
               

               Alignm gaps (pig, cow):
               53, 41
               

               Conread position:
               3-237
               

               Cow position:
               chr1:500177-500408 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               167
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               59, 54
               

               Conread position:
               4-135
               

               Cow position:
               chr1:84768876-84768745 (view UCSC Genome Browser custom track)
               

               Alignm length:
               132
               

               Alignm identity:
               98
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               4-136
               

               Cow position:
               chr1:54157297-54157431 (view UCSC Genome Browser custom track)
               

               Alignm length:
               135
               

               Alignm identity:
               103
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               4-140
               

               Cow position:
               chr1:31272439-31272304 (view UCSC Genome Browser custom track)
               

               Alignm length:
               137
               

               Alignm identity:
               107
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               111, 0
               

               Conread position:
               4-140
               

               Cow position:
               chr1:49153323-49153455 (view UCSC Genome Browser custom track)
               

               Alignm length:
               137
               

               Alignm identity:
               105
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               44, 0
               

               Conread position:
               4-141
               

               Cow position:
               chr1:3882456-3882319 (view UCSC Genome Browser custom track)
               

               Alignm length:
               138
               

               Alignm identity:
               111
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               4-141
               

               Cow position:
               chr1:32857035-32857178 (view UCSC Genome Browser custom track)
               

               Alignm length:
               144
               

               Alignm identity:
               109
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               24, 0
               

               Conread position:
               4-165
               

               Cow position:
               chr1:51044301-51044145 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               116
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               75, 0
               

               Conread position:
               4-178
               

               Cow position:
               chr1:13637660-13637489 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               142
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               112, 0
               

               Conread position:
               4-187
               

               Cow position:
               chr1:45019798-45019621 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               132
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               95, 120
               

               Conread position:
               4-187
               

               Cow position:
               chr1:89158122-89157945 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               141
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               119, 0
               

               Conread position:
               4-192
               

               Cow position:
               chr1:49433261-49433071 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               139
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               122, 0
               

               Conread position:
               4-194
               

               Cow position:
               chr1:43389045-43388863 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               154
               

               Alignm E-value:
               4.00001e-40
               

               Alignm gaps (pig, cow):
               39, 0
               

               Conread position:
               4-194
               

               Cow position:
               chr1:101525922-101525729 (view UCSC Genome Browser custom track)
               

               Alignm length:
               195
               

               Alignm identity:
               135
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               123, 186
               

               Conread position:
               4-200
               

               Cow position:
               chr1:95072335-95072540 (view UCSC Genome Browser custom track)
               

               Alignm length:
               207
               

               Alignm identity:
               158
               

               Alignm E-value:
               7e-36
               

               Alignm gaps (pig, cow):
               131, 190
               

               Conread position:
               4-201
               

               Cow position:
               chr1:33998762-33998947 (view UCSC Genome Browser custom track)
               

               Alignm length:
               198
               

               Alignm identity:
               141
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               40, 0
               

               Conread position:
               4-203
               

               Cow position:
               chr1:15333898-15334088 (view UCSC Genome Browser custom track)
               

               Alignm length:
               200
               

               Alignm identity:
               146
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               29, 0
               

               Conread position:
               4-203
               

               Cow position:
               chr1:53520914-53521105 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               148
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               82, 137
               

               Conread position:
               4-203
               

               Cow position:
               chr1:73721363-73721564 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               149
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               92, 107
               

               Conread position:
               4-203
               

               Cow position:
               chr1:95618645-95618841 (view UCSC Genome Browser custom track)
               

               Alignm length:
               200
               

               Alignm identity:
               143
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               117, 0
               

               Conread position:
               4-203
               

               Cow position:
               chr1:97833715-97833897 (view UCSC Genome Browser custom track)
               

               Alignm length:
               200
               

               Alignm identity:
               149
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               9, 0
               

               Conread position:
               4-208
               

               Cow position:
               chr1:22525881-22526079 (view UCSC Genome Browser custom track)
               

               Alignm length:
               205
               

               Alignm identity:
               147
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               116, 0
               

               Conread position:
               4-208
               

               Cow position:
               chr1:41697061-41697259 (view UCSC Genome Browser custom track)
               

               Alignm length:
               206
               

               Alignm identity:
               149
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               173, 35
               

               Conread position:
               4-208
               

               Cow position:
               chr1:55685975-55685773 (view UCSC Genome Browser custom track)
               

               Alignm length:
               205
               

               Alignm identity:
               161
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               132, 0
               

               Conread position:
               4-208
               

               Cow position:
               chr1:56477595-56477791 (view UCSC Genome Browser custom track)
               

               Alignm length:
               206
               

               Alignm identity:
               142
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               200, 129
               

               Conread position:
               4-208
               

               Cow position:
               chr1:73719464-73719676 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               151
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               116, 191
               

               Conread position:
               4-208
               

               Cow position:
               chr1:79165079-79164877 (view UCSC Genome Browser custom track)
               

               Alignm length:
               207
               

               Alignm identity:
               146
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               83, 45
               

               Conread position:
               4-209
               

               Cow position:
               chr1:12464661-12464459 (view UCSC Genome Browser custom track)
               

               Alignm length:
               207
               

               Alignm identity:
               168
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               169, 117
               

               Conread position:
               4-209
               

               Cow position:
               chr1:30948995-30949188 (view UCSC Genome Browser custom track)
               

               Alignm length:
               206
               

               Alignm identity:
               151
               

               Alignm E-value:
               9e-28
               

               Alignm gaps (pig, cow):
               68, 0
               

               Conread position:
               4-209
               

               Cow position:
               chr1:35162413-35162611 (view UCSC Genome Browser custom track)
               

               Alignm length:
               206
               

               Alignm identity:
               146
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               124, 0
               

               Conread position:
               4-209
               

               Cow position:
               chr1:102784961-102785152 (view UCSC Genome Browser custom track)
               

               Alignm length:
               207
               

               Alignm identity:
               152
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               166, 24
               

               Conread position:
               4-210
               

               Cow position:
               chr1:3942212-3942009 (view UCSC Genome Browser custom track)
               

               Alignm length:
               207
               

               Alignm identity:
               161
               

               Alignm E-value:
               5.00264e-43
               

               Alignm gaps (pig, cow):
               97, 0
               

               Conread position:
               4-210
               

               Cow position:
               chr1:15547474-15547672 (view UCSC Genome Browser custom track)
               

               Alignm length:
               207
               

               Alignm identity:
               142
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               49, 0
               

               Conread position:
               4-212
               

               Cow position:
               chr1:5821516-5821725 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               143
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               109, 92
               

               Conread position:
               4-212
               

               Cow position:
               chr1:51394421-51394628 (view UCSC Genome Browser custom track)
               

               Alignm length:
               210
               

               Alignm identity:
               147
               

               Alignm E-value:
               9e-28
               

               Alignm gaps (pig, cow):
               200, 106
               

               Conread position:
               4-215
               

               Cow position:
               chr1:68127187-68126979 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               147
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               142, 121
               

               Conread position:
               4-217
               

               Cow position:
               chr1:15488803-15489015 (view UCSC Genome Browser custom track)
               

               Alignm length:
               217
               

               Alignm identity:
               148
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               101, 92
               

               Conread position:
               4-220
               

               Cow position:
               chr1:30189153-30189374 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               163
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               19, 36
               

               Conread position:
               4-220
               

               Cow position:
               chr1:84811936-84811724 (view UCSC Genome Browser custom track)
               

               Alignm length:
               217
               

               Alignm identity:
               176
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               113, 0
               

               Conread position:
               4-221
               

               Cow position:
               chr1:5597205-5596993 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               170
               

               Alignm E-value:
               4.00001e-41
               

               Alignm gaps (pig, cow):
               58, 15
               

               Conread position:
               4-221
               

               Cow position:
               chr1:32014201-32014412 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               159
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               201, 14
               

               Conread position:
               4-221
               

               Cow position:
               chr1:50765615-50765831 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               152
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               49, 33
               

               Conread position:
               4-221
               

               Cow position:
               chr1:79135287-79135497 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               160
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               58, 33
               

               Conread position:
               4-221
               

               Cow position:
               chr1:82936594-82936387 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               168
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               113, 0
               

               Conread position:
               4-222
               

               Cow position:
               chr1:26178808-26178589 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               148
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               109, 91
               

               Conread position:
               4-222
               

               Cow position:
               chr1:53374436-53374644 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               153
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               120, 75
               

               Conread position:
               4-222
               

               Cow position:
               chr1:81569025-81568810 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               179
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               120, 0
               

               Conread position:
               4-225
               

               Cow position:
               chr1:197002-196786 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               178
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               102, 0
               

               Conread position:
               4-225
               

               Cow position:
               chr1:52662169-52661956 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               163
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               8, 0
               

               Conread position:
               4-227
               

               Cow position:
               chr1:5751316-5751536 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               168
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               99, 90
               

               Conread position:
               4-227
               

               Cow position:
               chr1:41181848-41182058 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               155
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               81, 0
               

               Conread position:
               4-228
               

               Cow position:
               chr1:93499623-93499844 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               177
               

               Alignm E-value:
               5.60519e-45
               

               Alignm gaps (pig, cow):
               34, 18
               

               Conread position:
               4-229
               

               Cow position:
               chr1:48214152-48213919 (view UCSC Genome Browser custom track)
               

               Alignm length:
               238
               

               Alignm identity:
               178
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               121, 40
               

               Conread position:
               4-229
               

               Cow position:
               chr1:78794228-78794010 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               157
               

               Alignm E-value:
               9e-28
               

               Alignm gaps (pig, cow):
               133, 0
               

               Conread position:
               4-229
               

               Cow position:
               chr1:93590583-93590368 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               181
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               120, 0
               

               Conread position:
               4-230
               

               Cow position:
               chr1:47790659-47790437 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               157
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               200, 67
               

               Conread position:
               4-231
               

               Cow position:
               chr1:98583755-98583975 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               169
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               31, 121
               

               Conread position:
               4-233
               

               Cow position:
               chr1:78857326-78857097 (view UCSC Genome Browser custom track)
               

               Alignm length:
               232
               

               Alignm identity:
               180
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               122, 184
               

               Conread position:
               4-235
               

               Cow position:
               chr1:22823908-22824141 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               174
               

               Alignm E-value:
               4.00001e-41
               

               Alignm gaps (pig, cow):
               122, 185
               

               Conread position:
               4-238
               

               Cow position:
               chr1:66752626-66752395 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               172
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               200, 116
               

               Conread position:
               5-114
               

               Cow position:
               chr1:52429656-52429547 (view UCSC Genome Browser custom track)
               

               Alignm length:
               110
               

               Alignm identity:
               87
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               5-130
               

               Cow position:
               chr1:85647776-85647653 (view UCSC Genome Browser custom track)
               

               Alignm length:
               126
               

               Alignm identity:
               99
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               88, 0
               

               Conread position:
               5-133
               

               Cow position:
               chr1:67688578-67688451 (view UCSC Genome Browser custom track)
               

               Alignm length:
               129
               

               Alignm identity:
               105
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               59, 0
               

               Conread position:
               5-139
               

               Cow position:
               chr1:41047297-41047164 (view UCSC Genome Browser custom track)
               

               Alignm length:
               136
               

               Alignm identity:
               107
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               112, 34
               

               Conread position:
               5-140
               

               Cow position:
               chr1:808817-808679 (view UCSC Genome Browser custom track)
               

               Alignm length:
               139
               

               Alignm identity:
               105
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               72, 0
               

               Conread position:
               5-140
               

               Cow position:
               chr1:3167069-3166935 (view UCSC Genome Browser custom track)
               

               Alignm length:
               138
               

               Alignm identity:
               105
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               110, 39
               

               Conread position:
               5-140
               

               Cow position:
               chr1:47233474-47233339 (view UCSC Genome Browser custom track)
               

               Alignm length:
               137
               

               Alignm identity:
               114
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               66, 61
               

               Conread position:
               5-141
               

               Cow position:
               chr1:45553236-45553103 (view UCSC Genome Browser custom track)
               

               Alignm length:
               137
               

               Alignm identity:
               109
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               39, 0
               

               Conread position:
               5-141
               

               Cow position:
               chr1:68845165-68845032 (view UCSC Genome Browser custom track)
               

               Alignm length:
               137
               

               Alignm identity:
               104
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               109, 0
               

               Conread position:
               5-141
               

               Cow position:
               chr1:71253549-71253416 (view UCSC Genome Browser custom track)
               

               Alignm length:
               137
               

               Alignm identity:
               105
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               39, 0
               

               Conread position:
               5-171
               

               Cow position:
               chr1:53458702-53458867 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               132
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               115, 39
               

               Conread position:
               5-172
               

               Cow position:
               chr1:4511987-4512149 (view UCSC Genome Browser custom track)
               

               Alignm length:
               168
               

               Alignm identity:
               120
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               116, 0
               

               Conread position:
               5-178
               

               Cow position:
               chr1:19516385-19516220 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               127
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               122, 52
               

               Conread position:
               5-193
               

               Cow position:
               chr1:98030927-98031105 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               147
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               90, 0
               

               Conread position:
               5-194
               

               Cow position:
               chr1:17196623-17196434 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               152
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               120, 182
               

               Conread position:
               5-194
               

               Cow position:
               chr1:33775639-33775448 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               149
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               35, 70
               

               Conread position:
               5-195
               

               Cow position:
               chr1:83025160-83024973 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               148
               

               Alignm E-value:
               7e-36
               

               Alignm gaps (pig, cow):
               88, 112
               

               Conread position:
               5-196
               

               Cow position:
               chr1:58754790-58754605 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               140
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               35, 0
               

               Conread position:
               5-196
               

               Cow position:
               chr1:62034824-62034642 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               144
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               62, 0
               

               Conread position:
               5-197
               

               Cow position:
               chr1:23633928-23633733 (view UCSC Genome Browser custom track)
               

               Alignm length:
               198
               

               Alignm identity:
               143
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               18, 99
               

               Conread position:
               5-197
               

               Cow position:
               chr1:97090330-97090511 (view UCSC Genome Browser custom track)
               

               Alignm length:
               193
               

               Alignm identity:
               145
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               124, 0
               

               Conread position:
               5-198
               

               Cow position:
               chr1:61011185-61011370 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               147
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               119, 0
               

               Conread position:
               5-199
               

               Cow position:
               chr1:11489157-11488962 (view UCSC Genome Browser custom track)
               

               Alignm length:
               199
               

               Alignm identity:
               140
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               19, 179
               

               Conread position:
               5-202
               

               Cow position:
               chr1:70828907-70829095 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               149
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               38, 74
               

               Conread position:
               5-202
               

               Cow position:
               chr1:79003980-79004175 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               159
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               120, 51
               

               Conread position:
               5-202
               

               Cow position:
               chr1:95156960-95156766 (view UCSC Genome Browser custom track)
               

               Alignm length:
               198
               

               Alignm identity:
               146
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               123, 0
               

               Conread position:
               5-203
               

               Cow position:
               chr1:8619-8818 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               147
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               120, 183
               

               Conread position:
               5-207
               

               Cow position:
               chr1:80584434-80584632 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               151
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               96, 0
               

               Conread position:
               5-208
               

               Cow position:
               chr1:3965840-3966034 (view UCSC Genome Browser custom track)
               

               Alignm length:
               206
               

               Alignm identity:
               152
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               120, 43
               

               Conread position:
               5-208
               

               Cow position:
               chr1:10716501-10716710 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               165
               

               Alignm E-value:
               4.00001e-40
               

               Alignm gaps (pig, cow):
               119, 44
               

               Conread position:
               5-208
               

               Cow position:
               chr1:20104270-20104471 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               156
               

               Alignm E-value:
               4.00001e-40
               

               Alignm gaps (pig, cow):
               117, 0
               

               Conread position:
               5-208
               

               Cow position:
               chr1:27959546-27959342 (view UCSC Genome Browser custom track)
               

               Alignm length:
               209
               

               Alignm identity:
               152
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               133, 39
               

               Conread position:
               5-208
               

               Cow position:
               chr1:92197459-92197659 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               155
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               110, 17
               

               Conread position:
               5-210
               

               Cow position:
               chr1:43286350-43286536 (view UCSC Genome Browser custom track)
               

               Alignm length:
               207
               

               Alignm identity:
               154
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               63, 69
               

               Conread position:
               5-210
               

               Cow position:
               chr1:77232574-77232362 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               169
               

               Alignm E-value:
               7e-36
               

               Alignm gaps (pig, cow):
               120, 182
               

               Conread position:
               5-210
               

               Cow position:
               chr1:102529853-102529646 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               164
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               112, 53
               

               Conread position:
               5-212
               

               Cow position:
               chr1:816405-816188 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               163
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               111, 39
               

               Conread position:
               5-213
               

               Cow position:
               chr1:68855169-68855376 (view UCSC Genome Browser custom track)
               

               Alignm length:
               210
               

               Alignm identity:
               150
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               22, 17
               

               Conread position:
               5-216
               

               Cow position:
               chr1:83072445-83072654 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               157
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               181, 0
               

               Conread position:
               5-217
               

               Cow position:
               chr1:78066533-78066328 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               168
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               63, 70
               

               Conread position:
               5-217
               

               Cow position:
               chr1:82513349-82513138 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               167
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               112, 96
               

               Conread position:
               5-219
               

               Cow position:
               chr1:99605183-99604975 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               165
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               198, 120
               

               Conread position:
               5-220
               

               Cow position:
               chr1:41056682-41056896 (view UCSC Genome Browser custom track)
               

               Alignm length:
               217
               

               Alignm identity:
               169
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               112, 182
               

               Conread position:
               5-221
               

               Cow position:
               chr1:54267933-54267720 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               178
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               190, 32
               

               Conread position:
               5-221
               

               Cow position:
               chr1:56225473-56225685 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               167
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               209, 117
               

               Conread position:
               5-221
               

               Cow position:
               chr1:89158693-89158488 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               167
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               199, 20
               

               Conread position:
               5-221
               

               Cow position:
               chr1:91023461-91023250 (view UCSC Genome Browser custom track)
               

               Alignm length:
               217
               

               Alignm identity:
               175
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               17, 0
               

               Conread position:
               5-224
               

               Cow position:
               chr1:73960707-73960908 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               162
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               203, 65
               

               Conread position:
               5-224
               

               Cow position:
               chr1:97303245-97303032 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               163
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               45, 0
               

               Conread position:
               5-225
               

               Cow position:
               chr1:42887273-42887061 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               176
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               111, 0
               

               Conread position:
               5-225
               

               Cow position:
               chr1:81290511-81290728 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               173
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               205, 44
               

               Conread position:
               5-225
               

               Cow position:
               chr1:83092879-83093082 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               165
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               39, 0
               

               Conread position:
               5-225
               

               Cow position:
               chr1:86682556-86682345 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               166
               

               Alignm E-value:
               6e-34
               

               Alignm gaps (pig, cow):
               215, 90
               

               Conread position:
               5-225
               

               Cow position:
               chr1:101158920-101159151 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               161
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               110, 56
               

               Conread position:
               5-229
               

               Cow position:
               chr1:1981109-1980885 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               164
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               97, 132
               

               Conread position:
               5-229
               

               Cow position:
               chr1:41138140-41137920 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               171
               

               Alignm E-value:
               4.00001e-40
               

               Alignm gaps (pig, cow):
               200, 116
               

               Conread position:
               5-229
               

               Cow position:
               chr1:42175725-42175954 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               180
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               16, 187
               

               Conread position:
               6-187
               

               Cow position:
               chr1:31630282-31630098 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               130
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               121, 0
               

               Conread position:
               6-194
               

               Cow position:
               chr1:95499491-95499305 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               143
               

               Alignm E-value:
               6e-35
               

               Alignm gaps (pig, cow):
               119, 0
               

               Conread position:
               6-208
               

               Cow position:
               chr1:87149810-87149611 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               146
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               136, 0
               

               Conread position:
               6-222
               

               Cow position:
               chr1:71295291-71295084 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               169
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               16, 125
               

               Conread position:
               7-141
               

               Cow position:
               chr1:85162541-85162405 (view UCSC Genome Browser custom track)
               

               Alignm length:
               137
               

               Alignm identity:
               106
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               108, 0
               

               Conread position:
               7-202
               

               Cow position:
               chr1:24581586-24581766 (view UCSC Genome Browser custom track)
               

               Alignm length:
               197
               

               Alignm identity:
               143
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               191, 14
               

               Conread position:
               7-203
               

               Cow position:
               chr1:35671548-35671736 (view UCSC Genome Browser custom track)
               

               Alignm length:
               197
               

               Alignm identity:
               145
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               37, 0
               

               Conread position:
               7-207
               

               Cow position:
               chr1:60603571-60603366 (view UCSC Genome Browser custom track)
               

               Alignm length:
               207
               

               Alignm identity:
               143
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               135, 185
               

               Conread position:
               7-210
               

               Cow position:
               chr1:4329894-4329701 (view UCSC Genome Browser custom track)
               

               Alignm length:
               205
               

               Alignm identity:
               151
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               201, 35
               

               Conread position:
               7-222
               

               Cow position:
               chr1:62964272-62964486 (view UCSC Genome Browser custom track)
               

               Alignm length:
               217
               

               Alignm identity:
               161
               

               Alignm E-value:
               9e-38
               

               Alignm gaps (pig, cow):
               111, 180
               

               Conread position:
               7-222
               

               Cow position:
               chr1:79640282-79640071 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               166
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               117, 0
               

               Conread position:
               7-223
               

               Cow position:
               chr1:78811044-78811259 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               166
               

               Alignm E-value:
               3.99931e-42
               

               Alignm gaps (pig, cow):
               198, 109
               

               Conread position:
               7-229
               

               Cow position:
               chr1:70483328-70483111 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               177
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               130, 0
               

               Conread position:
               7-229
               

               Cow position:
               chr1:71946078-71945854 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               181
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               114, 168
               

               Conread position:
               7-229
               

               Cow position:
               chr1:81477863-81477636 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               166
               

               Alignm E-value:
               6e-34
               

               Alignm gaps (pig, cow):
               95, 184
               

               Conread position:
               8-201
               

               Cow position:
               chr1:101439475-101439291 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               150
               

               Alignm E-value:
               6e-34
               

               Alignm gaps (pig, cow):
               29, 0
               

               Conread position:
               8-208
               

               Cow position:
               chr1:75744869-75745065 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               152
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               175, 0
               

               Conread position:
               8-233
               

               Cow position:
               chr1:47886472-47886248 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               164
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               97, 18
               

               Conread position:
               8-242
               

               Cow position:
               chr1:48206524-48206304 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               178
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               23, 0
               

               Conread position:
               9-195
               

               Cow position:
               chr1:87095206-87095019 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               136
               

               Alignm E-value:
               9e-28
               

               Alignm gaps (pig, cow):
               117, 179
               

               Conread position:
               9-196
               

               Cow position:
               chr1:7305976-7306162 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               131
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               93, 85
               

               Conread position:
               9-206
               

               Cow position:
               chr1:13828578-13828380 (view UCSC Genome Browser custom track)
               

               Alignm length:
               205
               

               Alignm identity:
               146
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               109, 34
               

               Conread position:
               9-206
               

               Cow position:
               chr1:78030024-78029823 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               143
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               90, 85
               

               Conread position:
               9-208
               

               Cow position:
               chr1:1878028-1878228 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               139
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               90, 85
               

               Conread position:
               9-208
               

               Cow position:
               chr1:29474339-29474147 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               139
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               113, 94
               

               Conread position:
               9-208
               

               Cow position:
               chr1:33846561-33846365 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               138
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               51, 30
               

               Conread position:
               9-208
               

               Cow position:
               chr1:42482210-42482405 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               142
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               124, 66
               

               Conread position:
               9-208
               

               Cow position:
               chr1:102468609-102468417 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               144
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               117, 152
               

               Conread position:
               9-221
               

               Cow position:
               chr1:81364268-81364479 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               148
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               117, 179
               

               Conread position:
               9-222
               

               Cow position:
               chr1:21577817-21578028 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               150
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               162, 107
               

               Conread position:
               9-225
               

               Cow position:
               chr1:34001055-34001265 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               153
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               61, 86
               

               Conread position:
               9-228
               

               Cow position:
               chr1:1496524-1496302 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               154
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               90, 85
               

               Conread position:
               9-229
               

               Cow position:
               chr1:11709010-11708797 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               170
               

               Alignm E-value:
               4.00001e-40
               

               Alignm gaps (pig, cow):
               200, 91
               

               Conread position:
               9-230
               

               Cow position:
               chr1:71770301-71770076 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               151
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               126, 179
               

               Conread position:
               9-232
               

               Cow position:
               chr1:17875699-17875483 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               161
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               200, 40
               

               Conread position:
               9-237
               

               Cow position:
               chr1:20950722-20950951 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               155
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               117, 179
               

               Conread position:
               10-221
               

               Cow position:
               chr1:524817-525023 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               161
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               104, 0
               

               Conread position:
               10-229
               

               Cow position:
               chr1:26934263-26934043 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               164
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               109, 179
               

               Conread position:
               10-231
               

               Cow position:
               chr1:29935378-29935164 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               162
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               101, 0
               

               Conread position:
               11-140
               

               Cow position:
               chr1:7023131-7023260 (view UCSC Genome Browser custom track)
               

               Alignm length:
               130
               

               Alignm identity:
               104
               

               Alignm E-value:
               9e-28
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               11-169
               

               Cow position:
               chr1:83606440-83606280 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               116
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               128, 0
               

               Conread position:
               11-207
               

               Cow position:
               chr1:71636315-71636124 (view UCSC Genome Browser custom track)
               

               Alignm length:
               199
               

               Alignm identity:
               158
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               21, 86
               

               Conread position:
               11-208
               

               Cow position:
               chr1:50585868-50585671 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               156
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               40, 116
               

               Conread position:
               11-219
               

               Cow position:
               chr1:54206804-54206602 (view UCSC Genome Browser custom track)
               

               Alignm length:
               210
               

               Alignm identity:
               156
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               194, 32
               

               Conread position:
               11-231
               

               Cow position:
               chr1:48447472-48447695 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               166
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               5, 69
               

               Conread position:
               12-148
               

               Cow position:
               chr1:84288414-84288549 (view UCSC Genome Browser custom track)
               

               Alignm length:
               137
               

               Alignm identity:
               106
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               114, 0
               

               Conread position:
               12-203
               

               Cow position:
               chr1:99609380-99609567 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               136
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               37, 0
               

               Conread position:
               12-208
               

               Cow position:
               chr1:33206870-33206669 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               147
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               40, 180
               

               Conread position:
               12-208
               

               Cow position:
               chr1:63460889-63461083 (view UCSC Genome Browser custom track)
               

               Alignm length:
               197
               

               Alignm identity:
               146
               

               Alignm E-value:
               6e-34
               

               Alignm gaps (pig, cow):
               103, 0
               

               Conread position:
               12-208
               

               Cow position:
               chr1:85622540-85622737 (view UCSC Genome Browser custom track)
               

               Alignm length:
               200
               

               Alignm identity:
               138
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               114, 82
               

               Conread position:
               12-208
               

               Cow position:
               chr1:98557108-98556913 (view UCSC Genome Browser custom track)
               

               Alignm length:
               197
               

               Alignm identity:
               144
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               173, 0
               

               Conread position:
               12-221
               

               Cow position:
               chr1:79718819-79719023 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               161
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               48, 9
               

               Conread position:
               12-222
               

               Cow position:
               chr1:81858890-81858682 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               146
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               40, 111
               

               Conread position:
               12-225
               

               Cow position:
               chr1:73545900-73545690 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               149
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               114, 176
               

               Conread position:
               12-226
               

               Cow position:
               chr1:31340760-31340545 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               148
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               101, 82
               

               Conread position:
               13-159
               

               Cow position:
               chr1:50329507-50329654 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               116
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               104, 31
               

               Conread position:
               13-203
               

               Cow position:
               chr1:57575752-57575564 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               143
               

               Alignm E-value:
               6e-34
               

               Alignm gaps (pig, cow):
               114, 0
               

               Conread position:
               13-208
               

               Cow position:
               chr1:19599349-19599155 (view UCSC Genome Browser custom track)
               

               Alignm length:
               197
               

               Alignm identity:
               140
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               125, 81
               

               Conread position:
               13-221
               

               Cow position:
               chr1:82537942-82538144 (view UCSC Genome Browser custom track)
               

               Alignm length:
               211
               

               Alignm identity:
               161
               

               Alignm E-value:
               6e-35
               

               Alignm gaps (pig, cow):
               42, 26
               

               Conread position:
               13-225
               

               Cow position:
               chr1:4582563-4582774 (view UCSC Genome Browser custom track)
               

               Alignm length:
               217
               

               Alignm identity:
               149
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               112, 36
               

               Conread position:
               13-231
               

               Cow position:
               chr1:98060073-98060282 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               163
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               22, 112
               

               Conread position:
               13-239
               

               Cow position:
               chr1:36079836-36080064 (view UCSC Genome Browser custom track)
               

               Alignm length:
               232
               

               Alignm identity:
               158
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               91, 83
               

               Conread position:
               14-225
               

               Cow position:
               chr1:48301440-48301230 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               144
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               7, 163
               

               Conread position:
               14-232
               

               Cow position:
               chr1:85339400-85339604 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               168
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               30, 0
               

               Conread position:
               15-202
               

               Cow position:
               chr1:29671210-29671021 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               156
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               126, 167
               

               Conread position:
               15-202
               

               Cow position:
               chr1:34856614-34856425 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               137
               

               Alignm E-value:
               8e-27
               

               Alignm gaps (pig, cow):
               111, 173
               

               Conread position:
               15-206
               

               Cow position:
               chr1:70416746-70416557 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               145
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               110, 0
               

               Conread position:
               15-208
               

               Cow position:
               chr1:15875674-15875864 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               133
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               99, 0
               

               Conread position:
               15-208
               

               Cow position:
               chr1:55229990-55230178 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               137
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               109, 0
               

               Conread position:
               15-208
               

               Cow position:
               chr1:73534627-73534437 (view UCSC Genome Browser custom track)
               

               Alignm length:
               196
               

               Alignm identity:
               138
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               116, 95
               

               Conread position:
               15-208
               

               Cow position:
               chr1:92996877-92996681 (view UCSC Genome Browser custom track)
               

               Alignm length:
               199
               

               Alignm identity:
               138
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               102, 94
               

               Conread position:
               15-209
               

               Cow position:
               chr1:94823378-94823183 (view UCSC Genome Browser custom track)
               

               Alignm length:
               197
               

               Alignm identity:
               137
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               111, 173
               

               Conread position:
               15-210
               

               Cow position:
               chr1:3323882-3324081 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               150
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               51, 82
               

               Conread position:
               15-210
               

               Cow position:
               chr1:22461224-22461029 (view UCSC Genome Browser custom track)
               

               Alignm length:
               199
               

               Alignm identity:
               137
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               91, 80
               

               Conread position:
               15-214
               

               Cow position:
               chr1:17056008-17056201 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               145
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               84, 27
               

               Conread position:
               15-222
               

               Cow position:
               chr1:64457979-64458192 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               153
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               119, 175
               

               Conread position:
               15-222
               

               Cow position:
               chr1:98380283-98380077 (view UCSC Genome Browser custom track)
               

               Alignm length:
               210
               

               Alignm identity:
               146
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               106, 87
               

               Conread position:
               15-225
               

               Cow position:
               chr1:76518436-76518647 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               154
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               101, 80
               

               Conread position:
               15-225
               

               Cow position:
               chr1:78092051-78092264 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               151
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               98, 81
               

               Conread position:
               15-229
               

               Cow position:
               chr1:38419037-38419257 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               147
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               109, 0
               

               Conread position:
               15-231
               

               Cow position:
               chr1:40303565-40303778 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               152
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               196, 111
               

               Conread position:
               16-221
               

               Cow position:
               chr1:52496786-52496991 (view UCSC Genome Browser custom track)
               

               Alignm length:
               209
               

               Alignm identity:
               147
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               89, 43
               

               Conread position:
               16-221
               

               Cow position:
               chr1:77810743-77810545 (view UCSC Genome Browser custom track)
               

               Alignm length:
               207
               

               Alignm identity:
               160
               

               Alignm E-value:
               9e-38
               

               Alignm gaps (pig, cow):
               27, 13
               

               Conread position:
               16-222
               

               Cow position:
               chr1:89835732-89835930 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               146
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               184, 101
               

               Conread position:
               16-225
               

               Cow position:
               chr1:69378584-69378376 (view UCSC Genome Browser custom track)
               

               Alignm length:
               211
               

               Alignm identity:
               161
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               106, 85
               

               Conread position:
               16-232
               

               Cow position:
               chr1:102730747-102730525 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               179
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               118, 174
               

               Conread position:
               17-175
               

               Cow position:
               chr1:6229964-6230120 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               118
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               149, 111
               

               Conread position:
               17-225
               

               Cow position:
               chr1:63212244-63212036 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               153
               

               Alignm E-value:
               8e-27
               

               Alignm gaps (pig, cow):
               35, 70
               

               Conread position:
               17-232
               

               Cow position:
               chr1:5872763-5872545 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               162
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               43, 38
               

               Conread position:
               18-197
               

               Cow position:
               chr1:49082760-49082940 (view UCSC Genome Browser custom track)
               

               Alignm length:
               182
               

               Alignm identity:
               129
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               109, 170
               

               Conread position:
               18-203
               

               Cow position:
               chr1:46939868-46939677 (view UCSC Genome Browser custom track)
               

               Alignm length:
               193
               

               Alignm identity:
               135
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               92, 175
               

               Conread position:
               18-208
               

               Cow position:
               chr1:54569715-54569906 (view UCSC Genome Browser custom track)
               

               Alignm length:
               193
               

               Alignm identity:
               138
               

               Alignm E-value:
               9e-28
               

               Alignm gaps (pig, cow):
               108, 170
               

               Conread position:
               18-213
               

               Cow position:
               chr1:81638565-81638750 (view UCSC Genome Browser custom track)
               

               Alignm length:
               197
               

               Alignm identity:
               141
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               180, 113
               

               Conread position:
               18-219
               

               Cow position:
               chr1:62519380-62519584 (view UCSC Genome Browser custom track)
               

               Alignm length:
               207
               

               Alignm identity:
               145
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               93, 76
               

               Conread position:
               18-221
               

               Cow position:
               chr1:76474540-76474341 (view UCSC Genome Browser custom track)
               

               Alignm length:
               206
               

               Alignm identity:
               155
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               107, 82
               

               Conread position:
               18-223
               

               Cow position:
               chr1:39684127-39683923 (view UCSC Genome Browser custom track)
               

               Alignm length:
               209
               

               Alignm identity:
               151
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               116, 68
               

               Conread position:
               18-223
               

               Cow position:
               chr1:77685964-77685761 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               150
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               108, 170
               

               Conread position:
               18-226
               

               Cow position:
               chr1:89298093-89297884 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               148
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               108, 61
               

               Conread position:
               18-226
               

               Cow position:
               chr1:89301702-89301493 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               148
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               108, 61
               

               Conread position:
               18-228
               

               Cow position:
               chr1:84594905-84595118 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               159
               

               Alignm E-value:
               7e-36
               

               Alignm gaps (pig, cow):
               108, 170
               

               Conread position:
               18-229
               

               Cow position:
               chr1:91649400-91649187 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               146
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               93, 36
               

               Conread position:
               18-236
               

               Cow position:
               chr1:49297668-49297881 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               150
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               107, 0
               

               Conread position:
               19-225
               

               Cow position:
               chr1:731955-731750 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               156
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               100, 165
               

               Conread position:
               19-231
               

               Cow position:
               chr1:71119539-71119748 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               152
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               115, 68
               

               Conread position:
               19-232
               

               Cow position:
               chr1:46693636-46693420 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               152
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               97, 77
               

               Conread position:
               19-250
               

               Cow position:
               chr1:32035692-32035465 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               167
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               185, 104
               

               Conread position:
               20-141
               

               Cow position:
               chr1:3417374-3417495 (view UCSC Genome Browser custom track)
               

               Alignm length:
               122
               

               Alignm identity:
               93
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               20-150
               

               Cow position:
               chr1:36578537-36578666 (view UCSC Genome Browser custom track)
               

               Alignm length:
               131
               

               Alignm identity:
               99
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               39, 0
               

               Conread position:
               20-208
               

               Cow position:
               chr1:32217261-32217443 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               134
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               42, 0
               

               Conread position:
               20-224
               

               Cow position:
               chr1:76740658-76740451 (view UCSC Genome Browser custom track)
               

               Alignm length:
               210
               

               Alignm identity:
               143
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               93, 74
               

               Conread position:
               20-226
               

               Cow position:
               chr1:5010817-5010607 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               147
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               93, 74
               

               Conread position:
               20-226
               

               Cow position:
               chr1:73458080-73457871 (view UCSC Genome Browser custom track)
               

               Alignm length:
               211
               

               Alignm identity:
               147
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               79, 170
               

               Conread position:
               20-229
               

               Cow position:
               chr1:62469080-62469283 (view UCSC Genome Browser custom track)
               

               Alignm length:
               210
               

               Alignm identity:
               165
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               29, 0
               

               Conread position:
               20-232
               

               Cow position:
               chr1:102523622-102523409 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               156
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               104, 142
               

               Conread position:
               20-233
               

               Cow position:
               chr1:98605685-98605474 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               148
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               92, 56
               

               Conread position:
               20-236
               

               Cow position:
               chr1:56719359-56719574 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               153
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               13, 19
               

               Conread position:
               21-204
               

               Cow position:
               chr1:53651007-53651180 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               147
               

               Alignm E-value:
               6e-34
               

               Alignm gaps (pig, cow):
               133, 51
               

               Conread position:
               23-197
               

               Cow position:
               chr1:91743437-91743269 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               139
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               21, 0
               

               Conread position:
               23-199
               

               Cow position:
               chr1:23372881-23373057 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               130
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               120, 94
               

               Conread position:
               23-206
               

               Cow position:
               chr1:98897672-98897487 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               132
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               100, 166
               

               Conread position:
               23-220
               

               Cow position:
               chr1:68710300-68710499 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               144
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               83, 73
               

               Conread position:
               23-220
               

               Cow position:
               chr1:74919957-74919758 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               141
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               87, 79
               

               Conread position:
               23-221
               

               Cow position:
               chr1:22828548-22828357 (view UCSC Genome Browser custom track)
               

               Alignm length:
               199
               

               Alignm identity:
               143
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               99, 0
               

               Conread position:
               23-228
               

               Cow position:
               chr1:60403788-60403991 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               143
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               111, 165
               

               Conread position:
               23-231
               

               Cow position:
               chr1:20537227-20537429 (view UCSC Genome Browser custom track)
               

               Alignm length:
               209
               

               Alignm identity:
               144
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               94, 0
               

               Conread position:
               24-199
               

               Cow position:
               chr1:79631512-79631338 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               127
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               89, 18
               

               Conread position:
               24-215
               

               Cow position:
               chr1:72356379-72356581 (view UCSC Genome Browser custom track)
               

               Alignm length:
               205
               

               Alignm identity:
               156
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               107, 92
               

               Conread position:
               24-228
               

               Cow position:
               chr1:92187980-92188185 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               145
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               110, 163
               

               Conread position:
               24-229
               

               Cow position:
               chr1:1802190-1802393 (view UCSC Genome Browser custom track)
               

               Alignm length:
               211
               

               Alignm identity:
               149
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               75, 70
               

               Conread position:
               25-215
               

               Cow position:
               chr1:3815660-3815469 (view UCSC Genome Browser custom track)
               

               Alignm length:
               195
               

               Alignm identity:
               143
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               101, 24
               

               Conread position:
               26-176
               

               Cow position:
               chr1:73494571-73494417 (view UCSC Genome Browser custom track)
               

               Alignm length:
               155
               

               Alignm identity:
               115
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               98, 0
               

               Conread position:
               26-218
               

               Cow position:
               chr1:20125817-20126009 (view UCSC Genome Browser custom track)
               

               Alignm length:
               197
               

               Alignm identity:
               145
               

               Alignm E-value:
               9e-28
               

               Alignm gaps (pig, cow):
               94, 46
               

               Conread position:
               26-225
               

               Cow position:
               chr1:31801895-31801696 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               144
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               28, 128
               

               Conread position:
               26-227
               

               Cow position:
               chr1:14567612-14567417 (view UCSC Genome Browser custom track)
               

               Alignm length:
               205
               

               Alignm identity:
               146
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               100, 60
               

               Conread position:
               26-227
               

               Cow position:
               chr1:67674578-67674385 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               148
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               16, 11
               

               Conread position:
               26-227
               

               Cow position:
               chr1:84782726-84782521 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               145
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               87, 70
               

               Conread position:
               26-231
               

               Cow position:
               chr1:10523726-10523925 (view UCSC Genome Browser custom track)
               

               Alignm length:
               209
               

               Alignm identity:
               151
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               100, 19
               

               Conread position:
               27-203
               

               Cow position:
               chr1:16767062-16766886 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               127
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               99, 160
               

               Conread position:
               29-203
               

               Cow position:
               chr1:14379519-14379350 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               125
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               75, 0
               

               Conread position:
               29-231
               

               Cow position:
               chr1:8172298-8172094 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               144
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               75, 67
               

               Conread position:
               29-232
               

               Cow position:
               chr1:100823065-100823269 (view UCSC Genome Browser custom track)
               

               Alignm length:
               206
               

               Alignm identity:
               148
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               97, 159
               

               Conread position:
               29-238
               

               Cow position:
               chr1:69678291-69678089 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               170
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               149, 24
               

               Conread position:
               30-141
               

               Cow position:
               chr1:53671721-53671610 (view UCSC Genome Browser custom track)
               

               Alignm length:
               112
               

               Alignm identity:
               90
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               33-178
               

               Cow position:
               chr1:4573755-4573901 (view UCSC Genome Browser custom track)
               

               Alignm length:
               149
               

               Alignm identity:
               113
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               66, 61
               

               Conread position:
               33-185
               

               Cow position:
               chr1:81471387-81471534 (view UCSC Genome Browser custom track)
               

               Alignm length:
               153
               

               Alignm identity:
               113
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               40, 0
               

               Conread position:
               33-193
               

               Cow position:
               chr1:31256194-31256039 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               120
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               131, 89
               

               Conread position:
               33-196
               

               Cow position:
               chr1:6941500-6941659 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               121
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               96, 0
               

               Conread position:
               33-196
               

               Cow position:
               chr1:6958913-6959072 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               121
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               96, 0
               

               Conread position:
               33-203
               

               Cow position:
               chr1:1606102-1605931 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               128
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               67, 19
               

               Conread position:
               33-208
               

               Cow position:
               chr1:627998-628173 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               125
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               88, 154
               

               Conread position:
               33-208
               

               Cow position:
               chr1:100800737-100800564 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               134
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               21, 85
               

               Conread position:
               33-209
               

               Cow position:
               chr1:102797966-102797793 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               130
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               93, 146
               

               Conread position:
               33-213
               

               Cow position:
               chr1:98742054-98742226 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               139
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               24, 0
               

               Conread position:
               33-221
               

               Cow position:
               chr1:7229654-7229467 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               135
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               66, 53
               

               Conread position:
               33-221
               

               Cow position:
               chr1:78079751-78079941 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               132
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               68, 156
               

               Conread position:
               33-229
               

               Cow position:
               chr1:6394589-6394781 (view UCSC Genome Browser custom track)
               

               Alignm length:
               199
               

               Alignm identity:
               143
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               27, 9
               

               Conread position:
               33-229
               

               Cow position:
               chr1:90879704-90879515 (view UCSC Genome Browser custom track)
               

               Alignm length:
               197
               

               Alignm identity:
               139
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               52, 0
               

               Conread position:
               33-233
               

               Cow position:
               chr1:43296687-43296481 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               147
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               97, 157
               

               Conread position:
               34-208
               

               Cow position:
               chr1:6077924-6078112 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               140
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               80, 0
               

               Conread position:
               34-208
               

               Cow position:
               chr1:46354406-46354235 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               137
               

               Alignm E-value:
               6e-35
               

               Alignm gaps (pig, cow):
               94, 0
               

               Conread position:
               35-228
               

               Cow position:
               chr1:3666997-3666804 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               144
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               71, 60
               

               Conread position:
               36-132
               

               Cow position:
               chr1:39708298-39708394 (view UCSC Genome Browser custom track)
               

               Alignm length:
               97
               

               Alignm identity:
               81
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               36-219
               

               Cow position:
               chr1:90820442-90820264 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               135
               

               Alignm E-value:
               8e-27
               

               Alignm gaps (pig, cow):
               17, 0
               

               Conread position:
               36-228
               

               Cow position:
               chr1:79178663-79178857 (view UCSC Genome Browser custom track)
               

               Alignm length:
               196
               

               Alignm identity:
               139
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               90, 151
               

               Conread position:
               37-203
               

               Cow position:
               chr1:55357259-55357089 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               124
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               89, 154
               

               Conread position:
               37-203
               

               Cow position:
               chr1:82337744-82337580 (view UCSC Genome Browser custom track)
               

               Alignm length:
               167
               

               Alignm identity:
               121
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               106, 0
               

               Conread position:
               37-203
               

               Cow position:
               chr1:92363627-92363470 (view UCSC Genome Browser custom track)
               

               Alignm length:
               167
               

               Alignm identity:
               130
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               64, 0
               

               Conread position:
               37-208
               

               Cow position:
               chr1:22231684-22231856 (view UCSC Genome Browser custom track)
               

               Alignm length:
               174
               

               Alignm identity:
               124
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               97, 151
               

               Conread position:
               37-208
               

               Cow position:
               chr1:101789057-101788892 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               124
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               87, 0
               

               Conread position:
               37-226
               

               Cow position:
               chr1:53402817-53403010 (view UCSC Genome Browser custom track)
               

               Alignm length:
               195
               

               Alignm identity:
               140
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               89, 151
               

               Conread position:
               37-230
               

               Cow position:
               chr1:78782011-78782215 (view UCSC Genome Browser custom track)
               

               Alignm length:
               206
               

               Alignm identity:
               146
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               53, 159
               

               Conread position:
               37-230
               

               Cow position:
               chr1:82917439-82917256 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               138
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               132, 0
               

               Conread position:
               37-231
               

               Cow position:
               chr1:7452945-7453142 (view UCSC Genome Browser custom track)
               

               Alignm length:
               200
               

               Alignm identity:
               138
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               80, 36
               

               Conread position:
               37-231
               

               Cow position:
               chr1:68730037-68730232 (view UCSC Genome Browser custom track)
               

               Alignm length:
               198
               

               Alignm identity:
               137
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               87, 9
               

               Conread position:
               37-232
               

               Cow position:
               chr1:92999067-92999282 (view UCSC Genome Browser custom track)
               

               Alignm length:
               217
               

               Alignm identity:
               156
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               71, 167
               

               Conread position:
               38-208
               

               Cow position:
               chr1:98317528-98317358 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               133
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               96, 137
               

               Conread position:
               38-229
               

               Cow position:
               chr1:69250471-69250659 (view UCSC Genome Browser custom track)
               

               Alignm length:
               193
               

               Alignm identity:
               141
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               187, 64
               

               Conread position:
               38-231
               

               Cow position:
               chr1:19384419-19384229 (view UCSC Genome Browser custom track)
               

               Alignm length:
               195
               

               Alignm identity:
               150
               

               Alignm E-value:
               7e-36
               

               Alignm gaps (pig, cow):
               171, 85
               

               Conread position:
               39-209
               

               Cow position:
               chr1:53456849-53457018 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               137
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               134, 24
               

               Conread position:
               39-225
               

               Cow position:
               chr1:23101713-23101899 (view UCSC Genome Browser custom track)
               

               Alignm length:
               190
               

               Alignm identity:
               147
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               134, 94
               

               Conread position:
               39-225
               

               Cow position:
               chr1:46245702-46245513 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               136
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               87, 41
               

               Conread position:
               39-226
               

               Cow position:
               chr1:79170115-79169931 (view UCSC Genome Browser custom track)
               

               Alignm length:
               190
               

               Alignm identity:
               146
               

               Alignm E-value:
               6e-34
               

               Alignm gaps (pig, cow):
               86, 142
               

               Conread position:
               39-237
               

               Cow position:
               chr1:42291963-42292155 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               144
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               173, 130
               

               Conread position:
               40-229
               

               Cow position:
               chr1:51968576-51968750 (view UCSC Genome Browser custom track)
               

               Alignm length:
               190
               

               Alignm identity:
               143
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               83, 0
               

               Conread position:
               43-220
               

               Cow position:
               chr1:2523005-2523182 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               131
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               79, 18
               

               Conread position:
               44-208
               

               Cow position:
               chr1:53474199-53474353 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               136
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               30, 0
               

               Conread position:
               44-210
               

               Cow position:
               chr1:93235887-93235727 (view UCSC Genome Browser custom track)
               

               Alignm length:
               167
               

               Alignm identity:
               122
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               46, 0
               

               Conread position:
               44-211
               

               Cow position:
               chr1:100575995-100575833 (view UCSC Genome Browser custom track)
               

               Alignm length:
               168
               

               Alignm identity:
               123
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               78, 0
               

               Conread position:
               44-221
               

               Cow position:
               chr1:55110535-55110720 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               143
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               81, 151
               

               Conread position:
               44-225
               

               Cow position:
               chr1:71664854-71664672 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               133
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               61, 50
               

               Conread position:
               45-221
               

               Cow position:
               chr1:64516847-64516680 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               130
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               167, 17
               

               Conread position:
               45-224
               

               Cow position:
               chr1:69411653-69411477 (view UCSC Genome Browser custom track)
               

               Alignm length:
               182
               

               Alignm identity:
               136
               

               Alignm E-value:
               9e-28
               

               Alignm gaps (pig, cow):
               81, 121
               

               Conread position:
               45-230
               

               Cow position:
               chr1:3034155-3033979 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               143
               

               Alignm E-value:
               9e-28
               

               Alignm gaps (pig, cow):
               160, 60
               

               Conread position:
               45-232
               

               Cow position:
               chr1:28563525-28563332 (view UCSC Genome Browser custom track)
               

               Alignm length:
               196
               

               Alignm identity:
               139
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               78, 148
               

               Conread position:
               46-208
               

               Cow position:
               chr1:30028187-30028027 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               131
               

               Alignm E-value:
               7e-36
               

               Alignm gaps (pig, cow):
               70, 0
               

               Conread position:
               46-208
               

               Cow position:
               chr1:99637209-99637046 (view UCSC Genome Browser custom track)
               

               Alignm length:
               166
               

               Alignm identity:
               122
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               53, 48
               

               Conread position:
               46-221
               

               Cow position:
               chr1:484422-484245 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               130
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               53, 48
               

               Conread position:
               46-229
               

               Cow position:
               chr1:7748258-7748442 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               140
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               53, 48
               

               Conread position:
               46-229
               

               Cow position:
               chr1:7752424-7752606 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               138
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               54, 48
               

               Conread position:
               46-229
               

               Cow position:
               chr1:43379317-43379137 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               141
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               53, 48
               

               Conread position:
               46-241
               

               Cow position:
               chr1:42796922-42797120 (view UCSC Genome Browser custom track)
               

               Alignm length:
               200
               

               Alignm identity:
               140
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               85, 180
               

               Conread position:
               48-196
               

               Cow position:
               chr1:99629211-99629355 (view UCSC Genome Browser custom track)
               

               Alignm length:
               149
               

               Alignm identity:
               110
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               38, 0
               

               Conread position:
               50-224
               

               Cow position:
               chr1:100727738-100727571 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               126
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               48, 0
               

               Conread position:
               50-229
               

               Cow position:
               chr1:81615703-81615876 (view UCSC Genome Browser custom track)
               

               Alignm length:
               182
               

               Alignm identity:
               144
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               96, 111
               

               Conread position:
               50-232
               

               Cow position:
               chr1:42592237-42592057 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               135
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               86, 22
               

               Conread position:
               51-210
               

               Cow position:
               chr1:11172421-11172575 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               119
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               29, 0
               

               Conread position:
               51-221
               

               Cow position:
               chr1:33720151-33720321 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               131
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               75, 137
               

               Conread position:
               51-221
               

               Cow position:
               chr1:49759591-49759762 (view UCSC Genome Browser custom track)
               

               Alignm length:
               174
               

               Alignm identity:
               125
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               75, 43
               

               Conread position:
               51-221
               

               Cow position:
               chr1:52139578-52139413 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               127
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               62, 43
               

               Conread position:
               51-228
               

               Cow position:
               chr1:59551487-59551666 (view UCSC Genome Browser custom track)
               

               Alignm length:
               182
               

               Alignm identity:
               132
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               58, 43
               

               Conread position:
               51-229
               

               Cow position:
               chr1:74751581-74751401 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               129
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               62, 43
               

               Conread position:
               51-242
               

               Cow position:
               chr1:47190945-47190753 (view UCSC Genome Browser custom track)
               

               Alignm length:
               197
               

               Alignm identity:
               139
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               87, 137
               

               Conread position:
               51-266
               

               Cow position:
               chr1:5284182-5283969 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               163
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               50, 144
               

               Conread position:
               55-227
               

               Cow position:
               chr1:69911156-69911337 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               135
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               5, 140
               

               Conread position:
               60-219
               

               Cow position:
               chr1:89213294-89213135 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               125
               

               Alignm E-value:
               8e-27
               

               Alignm gaps (pig, cow):
               60, 35
               

               Conread position:
               61-195
               

               Cow position:
               chr1:22394615-22394481 (view UCSC Genome Browser custom track)
               

               Alignm length:
               137
               

               Alignm identity:
               107
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               38, 33
               

               Conread position:
               61-196
               

               Cow position:
               chr1:1799090-1799225 (view UCSC Genome Browser custom track)
               

               Alignm length:
               137
               

               Alignm identity:
               111
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               54, 126
               

               Conread position:
               61-203
               

               Cow position:
               chr1:57395447-57395305 (view UCSC Genome Browser custom track)
               

               Alignm length:
               144
               

               Alignm identity:
               109
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               56, 126
               

               Conread position:
               61-208
               

               Cow position:
               chr1:10470486-10470627 (view UCSC Genome Browser custom track)
               

               Alignm length:
               148
               

               Alignm identity:
               119
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               61, 0
               

               Conread position:
               61-208
               

               Cow position:
               chr1:50853968-50854118 (view UCSC Genome Browser custom track)
               

               Alignm length:
               153
               

               Alignm identity:
               116
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               38, 33
               

               Conread position:
               61-208
               

               Cow position:
               chr1:64811295-64811442 (view UCSC Genome Browser custom track)
               

               Alignm length:
               150
               

               Alignm identity:
               115
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               83, 66
               

               Conread position:
               61-208
               

               Cow position:
               chr1:74305022-74304874 (view UCSC Genome Browser custom track)
               

               Alignm length:
               150
               

               Alignm identity:
               110
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               63, 127
               

               Conread position:
               61-211
               

               Cow position:
               chr1:65160188-65160338 (view UCSC Genome Browser custom track)
               

               Alignm length:
               153
               

               Alignm identity:
               112
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               65, 21
               

               Conread position:
               61-212
               

               Cow position:
               chr1:95976393-95976541 (view UCSC Genome Browser custom track)
               

               Alignm length:
               153
               

               Alignm identity:
               119
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               33, 56
               

               Conread position:
               61-221
               

               Cow position:
               chr1:4361997-4361836 (view UCSC Genome Browser custom track)
               

               Alignm length:
               166
               

               Alignm identity:
               124
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               52, 33
               

               Conread position:
               61-221
               

               Cow position:
               chr1:80385427-80385268 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               121
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               38, 33
               

               Conread position:
               61-222
               

               Cow position:
               chr1:4391211-4391045 (view UCSC Genome Browser custom track)
               

               Alignm length:
               168
               

               Alignm identity:
               127
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               67, 127
               

               Conread position:
               61-223
               

               Cow position:
               chr1:5479600-5479441 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               122
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               50, 33
               

               Conread position:
               61-224
               

               Cow position:
               chr1:83246485-83246646 (view UCSC Genome Browser custom track)
               

               Alignm length:
               166
               

               Alignm identity:
               128
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               73, 125
               

               Conread position:
               61-225
               

               Cow position:
               chr1:50906620-50906459 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               136
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               67, 0
               

               Conread position:
               61-225
               

               Cow position:
               chr1:83222044-83222212 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               124
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               63, 116
               

               Conread position:
               61-228
               

               Cow position:
               chr1:48695489-48695321 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               125
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               73, 33
               

               Conread position:
               61-228
               

               Cow position:
               chr1:73398014-73397846 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               127
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               65, 127
               

               Conread position:
               61-228
               

               Cow position:
               chr1:80870438-80870604 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               126
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               82, 127
               

               Conread position:
               61-229
               

               Cow position:
               chr1:1489347-1489179 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               124
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               60, 126
               

               Conread position:
               61-230
               

               Cow position:
               chr1:31806921-31807080 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               127
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               45, 33
               

               Conread position:
               61-230
               

               Cow position:
               chr1:80423672-80423507 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               143
               

               Alignm E-value:
               4.00001e-40
               

               Alignm gaps (pig, cow):
               33, 76
               

               Conread position:
               61-230
               

               Cow position:
               chr1:96964376-96964547 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               125
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               65, 127
               

               Conread position:
               61-231
               

               Cow position:
               chr1:66445022-66445181 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               126
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               73, 0
               

               Conread position:
               61-232
               

               Cow position:
               chr1:90192476-90192647 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               141
               

               Alignm E-value:
               6e-34
               

               Alignm gaps (pig, cow):
               50, 33
               

               Conread position:
               61-233
               

               Cow position:
               chr1:99031919-99031744 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               135
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               74, 49
               

               Conread position:
               61-242
               

               Cow position:
               chr1:7313628-7313447 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               130
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               67, 33
               

               Conread position:
               62-203
               

               Cow position:
               chr1:92578772-92578634 (view UCSC Genome Browser custom track)
               

               Alignm length:
               142
               

               Alignm identity:
               114
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               60, 0
               

               Conread position:
               62-219
               

               Cow position:
               chr1:70476690-70476537 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               129
               

               Alignm E-value:
               6e-35
               

               Alignm gaps (pig, cow):
               40, 0
               

               Conread position:
               62-224
               

               Cow position:
               chr1:97321993-97321824 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               130
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               63, 132
               

               Conread position:
               62-229
               

               Cow position:
               chr1:70344101-70344272 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               130
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               51, 32
               

               Conread position:
               63-208
               

               Cow position:
               chr1:39095550-39095690 (view UCSC Genome Browser custom track)
               

               Alignm length:
               146
               

               Alignm identity:
               119
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               62, 0
               

               Conread position:
               63-208
               

               Cow position:
               chr1:44814608-44814458 (view UCSC Genome Browser custom track)
               

               Alignm length:
               152
               

               Alignm identity:
               116
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               69, 129
               

               Conread position:
               63-223
               

               Cow position:
               chr1:41953940-41953778 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               123
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               36, 31
               

               Conread position:
               63-231
               

               Cow position:
               chr1:89146813-89146646 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               125
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               54, 125
               

               Conread position:
               65-225
               

               Cow position:
               chr1:64705963-64706122 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               124
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               42, 37
               

               Conread position:
               69-208
               

               Cow position:
               chr1:93960094-93959957 (view UCSC Genome Browser custom track)
               

               Alignm length:
               142
               

               Alignm identity:
               109
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               16, 106
               

               Conread position:
               70-198
               

               Cow position:
               chr1:26929928-26929799 (view UCSC Genome Browser custom track)
               

               Alignm length:
               131
               

               Alignm identity:
               100
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               55, 118
               

               Conread position:
               70-215
               

               Cow position:
               chr1:67177968-67178116 (view UCSC Genome Browser custom track)
               

               Alignm length:
               149
               

               Alignm identity:
               112
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               55, 0
               

               Conread position:
               70-227
               

               Cow position:
               chr1:44678366-44678538 (view UCSC Genome Browser custom track)
               

               Alignm length:
               174
               

               Alignm identity:
               131
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               54, 131
               

               Conread position:
               70-231
               

               Cow position:
               chr1:45233060-45233209 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               131
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               40, 0
               

               Conread position:
               71-207
               

               Cow position:
               chr1:61560431-61560292 (view UCSC Genome Browser custom track)
               

               Alignm length:
               141
               

               Alignm identity:
               118
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               55, 119
               

               Conread position:
               71-208
               

               Cow position:
               chr1:3679456-3679322 (view UCSC Genome Browser custom track)
               

               Alignm length:
               139
               

               Alignm identity:
               111
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               93, 24
               

               Conread position:
               71-225
               

               Cow position:
               chr1:6788075-6787921 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               125
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               63, 15
               

               Conread position:
               71-225
               

               Cow position:
               chr1:43340564-43340408 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               121
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               134, 115
               

               Conread position:
               71-235
               

               Cow position:
               chr1:97755573-97755731 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               131
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               50, 0
               

               Conread position:
               71-247
               

               Cow position:
               chr1:34767357-34767538 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               135
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               62, 121
               

               Conread position:
               72-203
               

               Cow position:
               chr1:73644436-73644308 (view UCSC Genome Browser custom track)
               

               Alignm length:
               132
               

               Alignm identity:
               105
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               69, 0
               

               Conread position:
               73-220
               

               Cow position:
               chr1:61564850-61564998 (view UCSC Genome Browser custom track)
               

               Alignm length:
               150
               

               Alignm identity:
               120
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               63, 115
               

               Conread position:
               75-208
               

               Cow position:
               chr1:34952317-34952443 (view UCSC Genome Browser custom track)
               

               Alignm length:
               134
               

               Alignm identity:
               105
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               19, 0
               

               Conread position:
               75-208
               

               Cow position:
               chr1:56107263-56107133 (view UCSC Genome Browser custom track)
               

               Alignm length:
               134
               

               Alignm identity:
               103
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               62, 0
               

               Conread position:
               75-210
               

               Cow position:
               chr1:8133997-8134133 (view UCSC Genome Browser custom track)
               

               Alignm length:
               139
               

               Alignm identity:
               107
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               51, 27
               

               Conread position:
               77-228
               

               Cow position:
               chr1:8778259-8778116 (view UCSC Genome Browser custom track)
               

               Alignm length:
               152
               

               Alignm identity:
               115
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               47, 0
               

               Conread position:
               78-229
               

               Cow position:
               chr1:709828-709677 (view UCSC Genome Browser custom track)
               

               Alignm length:
               156
               

               Alignm identity:
               117
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               65, 105
               

               Conread position:
               79-229
               

               Cow position:
               chr1:99221555-99221409 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               119
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               53, 0
               

               Conread position:
               80-201
               

               Cow position:
               chr1:43052422-43052304 (view UCSC Genome Browser custom track)
               

               Alignm length:
               122
               

               Alignm identity:
               99
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               57, 0
               

               Conread position:
               80-222
               

               Cow position:
               chr1:14067367-14067223 (view UCSC Genome Browser custom track)
               

               Alignm length:
               146
               

               Alignm identity:
               113
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               15, 108
               

               Conread position:
               88-229
               

               Cow position:
               chr1:20205427-20205573 (view UCSC Genome Browser custom track)
               

               Alignm length:
               148
               

               Alignm identity:
               117
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               43, 103
               

               Conread position:
               91-229
               

               Cow position:
               chr1:83066741-83066603 (view UCSC Genome Browser custom track)
               

               Alignm length:
               141
               

               Alignm identity:
               113
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               116, 34
               

               Conread position:
               92-220
               

               Cow position:
               chr1:87989100-87988977 (view UCSC Genome Browser custom track)
               

               Alignm length:
               129
               

               Alignm identity:
               104
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               87, 0
               

               Conread position:
               97-221
               

               Cow position:
               chr1:73642344-73642221 (view UCSC Genome Browser custom track)
               

               Alignm length:
               125
               

               Alignm identity:
               97
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               89, 0
               

               Conread position:
               97-236
               

               Cow position:
               chr1:26447842-26447981 (view UCSC Genome Browser custom track)
               

               Alignm length:
               142
               

               Alignm identity:
               107
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               27, 52
               

               Conread position:
               103-203
               

               Cow position:
               chr1:67585650-67585751 (view UCSC Genome Browser custom track)
               

               Alignm length:
               103
               

               Alignm identity:
               87
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               23, 85
               

               Conread position:
               103-229
               

               Cow position:
               chr1:36306777-36306902 (view UCSC Genome Browser custom track)
               

               Alignm length:
               129
               

               Alignm identity:
               104
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               31, 85
               

               Conread position:
               105-218
               

               Cow position:
               chr1:52429460-52429344 (view UCSC Genome Browser custom track)
               

               Alignm length:
               118
               

               Alignm identity:
               96
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               11, 84
               

               Conread position:
               106-227
               

               Cow position:
               chr1:92782794-92782674 (view UCSC Genome Browser custom track)
               

               Alignm length:
               124
               

               Alignm identity:
               99
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               90, 30
               

               Conread position:
               107-224
               

               Cow position:
               chr1:93235407-93235291 (view UCSC Genome Browser custom track)
               

               Alignm length:
               118
               

               Alignm identity:
               92
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               79, 0
               

               Conread position:
               110-224
               

               Cow position:
               chr1:57087959-57088072 (view UCSC Genome Browser custom track)
               

               Alignm length:
               116
               

               Alignm identity:
               94
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               11, 81
               

               Conread position:
               123-227
               

               Cow position:
               chr1:50992080-50992182 (view UCSC Genome Browser custom track)
               

               Alignm length:
               105
               

               Alignm identity:
               88
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               63, 0
               
Show alignments to all cow chromosomes.
Conread position:	1-112
Cow position:	chr1:12978682-12978793 (view UCSC Genome Browser custom track)
Alignm length:	112
Alignm identity:	88
Alignm E-value:	4e-21
Alignm gaps (pig, cow):	0, 0
Conread position:	1-119
Cow position:	chr1:83618608-83618486 (view UCSC Genome Browser custom track)
Alignm length:	123
Alignm identity:	97
Alignm E-value:	1e-21
Alignm gaps (pig, cow):	56, 0
Conread position:	1-120
Cow position:	chr1:85028953-85029073 (view UCSC Genome Browser custom track)
Alignm length:	121
Alignm identity:	97
Alignm E-value:	2e-24
Alignm gaps (pig, cow):	57, 0
Conread position:	1-125
Cow position:	chr1:42537323-42537198 (view UCSC Genome Browser custom track)
Alignm length:	127
Alignm identity:	99
Alignm E-value:	1e-21
Alignm gaps (pig, cow):	51, 87
Conread position:	1-132
Cow position:	chr1:93044021-93044148 (view UCSC Genome Browser custom track)
Alignm length:	132
Alignm identity:	107
Alignm E-value:	3e-27
Alignm gaps (pig, cow):	25, 0
Conread position:	1-134
Cow position:	chr1:69481948-69481817 (view UCSC Genome Browser custom track)
Alignm length:	134
Alignm identity:	102
Alignm E-value:	2e-22
Alignm gaps (pig, cow):	108, 0
Conread position:	1-135
Cow position:	chr1:62036802-62036937 (view UCSC Genome Browser custom track)
Alignm length:	136
Alignm identity:	110
Alignm E-value:	1e-29
Alignm gaps (pig, cow):	123, 0
Conread position:	1-136
Cow position:	chr1:92369736-92369869 (view UCSC Genome Browser custom track)
Alignm length:	139
Alignm identity:	108
Alignm E-value:	1e-21
Alignm gaps (pig, cow):	31, 56
Conread position:	1-137
Cow position:	chr1:84255767-84255903 (view UCSC Genome Browser custom track)
Alignm length:	138
Alignm identity:	112
Alignm E-value:	1e-29
Alignm gaps (pig, cow):	61, 52
Conread position:	1-138
Cow position:	chr1:44269091-44269225 (view UCSC Genome Browser custom track)
Alignm length:	139
Alignm identity:	109
Alignm E-value:	2e-24
Alignm gaps (pig, cow):	92, 43
Conread position:	1-140
Cow position:	chr1:52995024-52995165 (view UCSC Genome Browser custom track)
Alignm length:	142
Alignm identity:	106
Alignm E-value:	5e-22
Alignm gaps (pig, cow):	77, 0
Conread position:	1-141
Cow position:	chr1:8670773-8670912 (view UCSC Genome Browser custom track)
Alignm length:	142
Alignm identity:	106
Alignm E-value:	4e-21
Alignm gaps (pig, cow):	92, 85
Conread position:	1-142
Cow position:	chr1:83783930-83783790 (view UCSC Genome Browser custom track)
Alignm length:	142
Alignm identity:	109
Alignm E-value:	7e-26
Alignm gaps (pig, cow):	121, 0
Conread position:	1-146
Cow position:	chr1:80841646-80841791 (view UCSC Genome Browser custom track)
Alignm length:	146
Alignm identity:	116
Alignm E-value:	1e-31
Alignm gaps (pig, cow):	0, 0
Conread position:	1-148
Cow position:	chr1:39510058-39509911 (view UCSC Genome Browser custom track)
Alignm length:	148
Alignm identity:	107
Alignm E-value:	5e-22
Alignm gaps (pig, cow):	0, 0
Conread position:	1-151
Cow position:	chr1:89341986-89341832 (view UCSC Genome Browser custom track)
Alignm length:	157
Alignm identity:	125
Alignm E-value:	3e-29
Alignm gaps (pig, cow):	26, 129
Conread position:	1-162
Cow position:	chr1:19962053-19962209 (view UCSC Genome Browser custom track)
Alignm length:	162
Alignm identity:	126
Alignm E-value:	4e-30
Alignm gaps (pig, cow):	43, 0
Conread position:	1-169
Cow position:	chr1:69694992-69694831 (view UCSC Genome Browser custom track)
Alignm length:	170
Alignm identity:	124
Alignm E-value:	1e-21
Alignm gaps (pig, cow):	15, 32
Conread position:	1-176
Cow position:	chr1:96277052-96276879 (view UCSC Genome Browser custom track)
Alignm length:	179
Alignm identity:	132
Alignm E-value:	2e-24
Alignm gaps (pig, cow):	31, 45
Conread position:	1-178
Cow position:	chr1:53397975-53398149 (view UCSC Genome Browser custom track)
Alignm length:	178
Alignm identity:	134
Alignm E-value:	1e-31
Alignm gaps (pig, cow):	124, 0