Cow genome map

Conread name: rcje38_p18.y1

Conread position: 1-114
Cow position: chr11:28168446-28168333 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 92
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 1-115
Cow position: chr11:53553195-53553306 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 92
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 73, 0

Conread position: 1-120
Cow position: chr11:3248729-3248611 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 95
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 43, 0

Conread position: 1-122
Cow position: chr11:23128563-23128442 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 96
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 1-132
Cow position: chr11:32690994-32690863 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 104
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 1-134
Cow position: chr11:35803112-35803246 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 107
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 67, 41

Conread position: 1-136
Cow position: chr11:69119270-69119406 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 113
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 122, 0

Conread position: 1-136
Cow position: chr11:83230423-83230289 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 103
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 23, 0

Conread position: 1-138
Cow position: chr11:26845617-26845481 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 109
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 109, 0

Conread position: 1-138
Cow position: chr11:44234332-44234469 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 102
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 1-138
Cow position: chr11:79019082-79018945 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 113
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 0, 0

Conread position: 1-141
Cow position: chr11:2092313-2092446 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 111
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 125, 21

Conread position: 1-141
Cow position: chr11:28644064-28644204 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 112
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 0, 0

Conread position: 1-141
Cow position: chr11:48272177-48272317 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 112
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 0, 0

Conread position: 1-141
Cow position: chr11:54334305-54334445 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 105
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 1-141
Cow position: chr11:56290488-56290628 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 107
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 1-141
Cow position: chr11:59702463-59702606 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 112
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 71, 125

Conread position: 1-145
Cow position: chr11:30355035-30355178 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 112
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 135, 0

Conread position: 1-156
Cow position: chr11:23586615-23586773 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 121
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 123, 0

Conread position: 1-157
Cow position: chr11:59872907-59873056 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 121
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 58, 32

Conread position: 1-162
Cow position: chr11:34113241-34113400 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 118
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 34, 123

Conread position: 1-172
Cow position: chr11:3393232-3393066 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 137
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 72, 0

Conread position: 1-178
Cow position: chr11:17493455-17493637 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 135
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 61, 99

Conread position: 1-181
Cow position: chr11:24599410-24599238 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 136
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 72, 0

Conread position: 1-182
Cow position: chr11:58927560-58927731 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 135
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 41, 53

Conread position: 1-192
Cow position: chr11:11469671-11469485 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 153
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 105, 0

Conread position: 1-193
Cow position: chr11:78820128-78820317 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 138
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 50, 0

Conread position: 1-196
Cow position: chr11:8525136-8524947 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 149
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 55, 0

Conread position: 1-196
Cow position: chr11:19606554-19606765 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 159
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 122, 206

Conread position: 1-196
Cow position: chr11:42296643-42296456 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 152
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 172, 123

Conread position: 1-196
Cow position: chr11:77319391-77319583 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 151
Alignm E-value: 8e-39
Alignm gaps (pig, cow): 123, 0

Conread position: 1-197
Cow position: chr11:62889917-62889720 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 141
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 125, 187

Conread position: 1-199
Cow position: chr11:35109561-35109366 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 150
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 60, 32

Conread position: 1-200
Cow position: chr11:2907546-2907359 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 153
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 41, 0

Conread position: 1-200
Cow position: chr11:13043169-13042973 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 148
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 123, 0

Conread position: 1-200
Cow position: chr11:77705735-77705925 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 146
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 32, 0

Conread position: 1-201
Cow position: chr11:82731021-82730808 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 153
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 132, 198

Conread position: 1-202
Cow position: chr11:14470346-14470538 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 146
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 23, 0

Conread position: 1-202
Cow position: chr11:17036551-17036355 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 153
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 115, 0

Conread position: 1-202
Cow position: chr11:17083333-17083136 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 162
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 173, 116

Conread position: 1-202
Cow position: chr11:43360800-43360610 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 148
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 23, 0

Conread position: 1-202
Cow position: chr11:47837297-47837496 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 144
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 145, 18

Conread position: 1-203
Cow position: chr11:11125640-11125843 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 152
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 131, 109

Conread position: 1-203
Cow position: chr11:11533951-11533757 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 146
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 41, 0

Conread position: 1-203
Cow position: chr11:21844155-21843961 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 156
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 12, 0

Conread position: 1-203
Cow position: chr11:32398615-32398819 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 146
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 123, 43

Conread position: 1-203
Cow position: chr11:41293841-41293626 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 160
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 142, 197

Conread position: 1-203
Cow position: chr11:48544410-48544614 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 163
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 32, 119

Conread position: 1-203
Cow position: chr11:51729263-51729452 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 152
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 133, 0

Conread position: 1-203
Cow position: chr11:71492883-71492686 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 145
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 34, 0

Conread position: 1-203
Cow position: chr11:72292529-72292739 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 159
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 119, 194

Conread position: 1-203
Cow position: chr11:79466188-79466400 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 150
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 112, 196

Conread position: 1-203
Cow position: chr11:84764013-84764195 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 147
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 43, 0

Conread position: 1-204
Cow position: chr11:18851885-18852082 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 153
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 66, 0

Conread position: 1-204
Cow position: chr11:80564270-80564476 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 164
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 124, 100

Conread position: 1-206
Cow position: chr11:15339040-15339236 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 148
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 79, 0

Conread position: 1-207
Cow position: chr11:259195-258991 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 161
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 178, 113

Conread position: 1-208
Cow position: chr11:41155-41353 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 155
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 67, 19

Conread position: 1-208
Cow position: chr11:10095320-10095526 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 142
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 185, 0

Conread position: 1-208
Cow position: chr11:19946412-19946604 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 148
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 94, 0

Conread position: 1-208
Cow position: chr11:20761824-20762035 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 164
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 124, 56

Conread position: 1-208
Cow position: chr11:30493973-30494171 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 161
Alignm E-value: 7e-38
Alignm gaps (pig, cow): 43, 0

Conread position: 1-208
Cow position: chr11:35213191-35212988 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 157
Alignm E-value: 7e-38
Alignm gaps (pig, cow): 140, 0

Conread position: 1-208
Cow position: chr11:35352061-35351850 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 153
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 59, 8

Conread position: 1-208
Cow position: chr11:37804577-37804369 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 148
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 123, 187

Conread position: 1-208
Cow position: chr11:41986069-41985865 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 145
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 137, 0

Conread position: 1-208
Cow position: chr11:66188340-66188138 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 148
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 101, 0

Conread position: 1-208
Cow position: chr11:67600761-67600961 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 145
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 115, 0

Conread position: 1-208
Cow position: chr11:70978757-70978552 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 148
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 179, 94

Conread position: 1-208
Cow position: chr11:83032657-83032860 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 157
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 129, 0

Conread position: 1-209
Cow position: chr11:5201675-5201462 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 161
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 128, 110

Conread position: 1-209
Cow position: chr11:10992242-10992442 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 162
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 67, 28

Conread position: 1-209
Cow position: chr11:15382526-15382311 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 175
Alignm E-value: 0
Alignm gaps (pig, cow): 113, 193

Conread position: 1-210
Cow position: chr11:30867160-30867362 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 160
Alignm E-value: 8e-39
Alignm gaps (pig, cow): 123, 0

Conread position: 1-213
Cow position: chr11:34646566-34646784 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 175
Alignm E-value: 0
Alignm gaps (pig, cow): 134, 191

Conread position: 1-213
Cow position: chr11:35669975-35669778 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 158
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 80, 0

Conread position: 1-213
Cow position: chr11:70250891-70251102 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 162
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 58, 140

Conread position: 1-214
Cow position: chr11:4207288-4207500 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 154
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 119, 94

Conread position: 1-214
Cow position: chr11:46427431-46427218 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 156
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 105, 179

Conread position: 1-214
Cow position: chr11:62789107-62789316 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 171
Alignm E-value: 0
Alignm gaps (pig, cow): 124, 0

Conread position: 1-219
Cow position: chr11:18447515-18447307 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 174
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 59, 53

Conread position: 1-219
Cow position: chr11:41215709-41215929 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 160
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 98, 93

Conread position: 1-220
Cow position: chr11:17227665-17227458 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 165
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 38, 0

Conread position: 1-220
Cow position: chr11:47784751-47784976 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 163
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 123, 191

Conread position: 1-220
Cow position: chr11:67615269-67615059 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 167
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 50, 0

Conread position: 1-221
Cow position: chr11:3896722-3896502 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 165
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 114, 28

Conread position: 1-221
Cow position: chr11:13499994-13500208 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 155
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 205, 17

Conread position: 1-221
Cow position: chr11:19247222-19247008 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 151
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 206, 45

Conread position: 1-221
Cow position: chr11:20205875-20205663 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 173
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 119, 0

Conread position: 1-221
Cow position: chr11:30843042-30842831 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 165
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 107, 0

Conread position: 1-221
Cow position: chr11:48085895-48086114 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 172
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 58, 138

Conread position: 1-221
Cow position: chr11:68913118-68913339 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 157
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 116, 9

Conread position: 1-222
Cow position: chr11:33409285-33409070 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 170
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 121, 0

Conread position: 1-222
Cow position: chr11:80639573-80639358 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 168
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 28, 137

Conread position: 1-223
Cow position: chr11:261291-261058 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 165
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 141, 173

Conread position: 1-223
Cow position: chr11:6233903-6233680 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 150
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 134, 187

Conread position: 1-223
Cow position: chr11:39249949-39250163 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 157
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 199, 85

Conread position: 1-223
Cow position: chr11:50472294-50472513 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 154
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 125, 15

Conread position: 1-223
Cow position: chr11:64029286-64029071 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 159
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 120, 63

Conread position: 1-224
Cow position: chr11:53773658-53773883 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 157
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 110, 95

Conread position: 1-224
Cow position: chr11:65762613-65762386 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 175
Alignm E-value: 8.99999e-40
Alignm gaps (pig, cow): 98, 9

Conread position: 1-225
Cow position: chr11:2925319-2925108 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 161
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 55, 0

Conread position: 1-225
Cow position: chr11:6245295-6245517 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 165
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 98, 42

Conread position: 1-225
Cow position: chr11:18698856-18699070 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 160
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 115, 0

Conread position: 1-225
Cow position: chr11:25119954-25119735 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 176
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 210, 18

Conread position: 1-225
Cow position: chr11:40395416-40395639 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 161
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 110, 93

Conread position: 1-225
Cow position: chr11:45435056-45435279 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 170
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 24, 122

Conread position: 1-225
Cow position: chr11:46747884-46747664 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 163
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 51, 41

Conread position: 1-225
Cow position: chr11:53816834-53817053 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 161
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 115, 24

Conread position: 1-225
Cow position: chr11:55333886-55334119 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 162
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 113, 195

Conread position: 1-225
Cow position: chr11:62620353-62620578 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 177
Alignm E-value: 0
Alignm gaps (pig, cow): 203, 185

Conread position: 1-225
Cow position: chr11:70483875-70483652 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 155
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 61, 41

Conread position: 1-227
Cow position: chr11:2917609-2917391 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 174
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 91, 0

Conread position: 1-227
Cow position: chr11:62663255-62663045 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 169
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 47, 0

Conread position: 1-228
Cow position: chr11:13592712-13592940 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 165
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 123, 189

Conread position: 1-228
Cow position: chr11:23407441-23407662 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 176
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 123, 0

Conread position: 1-228
Cow position: chr11:30830637-30830420 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 184
Alignm E-value: 0
Alignm gaps (pig, cow): 123, 0

Conread position: 1-228
Cow position: chr11:33348210-33347996 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 158
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 94, 0

Conread position: 1-228
Cow position: chr11:39060625-39060403 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 177
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 0

Conread position: 1-228
Cow position: chr11:55052848-55053067 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 172
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 204, 123

Conread position: 1-229
Cow position: chr11:3714802-3715027 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 158
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 130, 23

Conread position: 1-229
Cow position: chr11:4225074-4225291 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 172
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 48, 0

Conread position: 1-229
Cow position: chr11:7874115-7874344 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 160
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 114, 93

Conread position: 1-229
Cow position: chr11:18915003-18915213 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 175
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 100, 0

Conread position: 1-229
Cow position: chr11:29659536-29659765 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 162
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 113, 147

Conread position: 1-229
Cow position: chr11:63065632-63065854 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 158
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 98, 23

Conread position: 1-229
Cow position: chr11:66939615-66939387 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 166
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 52, 8

Conread position: 1-230
Cow position: chr11:17990260-17990032 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 163
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 136, 54

Conread position: 1-230
Cow position: chr11:39462600-39462826 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 169
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 203, 123

Conread position: 1-231
Cow position: chr11:2084120-2084348 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 167
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 132, 187

Conread position: 1-231
Cow position: chr11:8669987-8670223 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 161
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 36, 192

Conread position: 1-231
Cow position: chr11:55911657-55911441 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 166
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 43, 0

Conread position: 1-231
Cow position: chr11:56288522-56288749 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 162
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 22, 43

Conread position: 1-231
Cow position: chr11:63866682-63866456 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 184
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 18

Conread position: 1-231
Cow position: chr11:66572520-66572287 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 164
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 123, 32

Conread position: 1-232
Cow position: chr11:5075251-5075021 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 157
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 125, 95

Conread position: 1-232
Cow position: chr11:53778593-53778828 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 171
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 120, 189

Conread position: 1-232
Cow position: chr11:63035210-63034959 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 177
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 29, 206

Conread position: 1-233
Cow position: chr11:77745275-77745040 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 162
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 98, 113

Conread position: 1-235
Cow position: chr11:67312757-67312995 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 170
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 134, 186

Conread position: 1-238
Cow position: chr11:80820026-80819814 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 172
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 48, 0

Conread position: 1-241
Cow position: chr11:897650-897877 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 181
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 115, 0

Conread position: 1-251
Cow position: chr11:30895027-30894778 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 195
Alignm E-value: 0
Alignm gaps (pig, cow): 126, 186

Conread position: 2-181
Cow position: chr11:24601942-24602117 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 144
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 74, 115

Conread position: 2-213
Cow position: chr11:30192153-30192366 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 166
Alignm E-value: 7e-38
Alignm gaps (pig, cow): 21, 177

Conread position: 2-225
Cow position: chr11:85186550-85186328 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 155
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 130, 183

Conread position: 2-230
Cow position: chr11:46884351-46884581 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 161
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 124, 186

Conread position: 2-230
Cow position: chr11:56114916-56115142 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 178
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 46, 135

Conread position: 3-120
Cow position: chr11:6194184-6194302 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 93
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 102, 0

Conread position: 3-141
Cow position: chr11:17831242-17831106 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 107
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 26, 0

Conread position: 3-194
Cow position: chr11:39855035-39854853 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 137
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 30, 0

Conread position: 3-208
Cow position: chr11:17676394-17676192 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 158
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 121, 0

Conread position: 3-231
Cow position: chr11:36182669-36182897 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 175
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 43, 138

Conread position: 4-135
Cow position: chr11:62150911-62150783 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 107
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 40, 0

Conread position: 4-136
Cow position: chr11:40573352-40573224 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 102
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 31, 0

Conread position: 4-141
Cow position: chr11:1071111-1070974 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 107
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 58, 53

Conread position: 4-141
Cow position: chr11:22747348-22747215 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 110
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 16, 30

Conread position: 4-152
Cow position: chr11:43898119-43898267 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 112
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 130, 20

Conread position: 4-196
Cow position: chr11:28993758-28993577 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 143
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 79, 0

Conread position: 4-196
Cow position: chr11:34467550-34467733 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 143
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 29, 0

Conread position: 4-197
Cow position: chr11:48474683-48474881 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 145
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 128, 157

Conread position: 4-198
Cow position: chr11:49207691-49207884 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 140
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 119, 11

Conread position: 4-202
Cow position: chr11:55761848-55762033 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 143
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 100, 0

Conread position: 4-203
Cow position: chr11:46746611-46746814 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 153
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 48, 156

Conread position: 4-203
Cow position: chr11:55744447-55744647 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 139
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 136, 184

Conread position: 4-206
Cow position: chr11:38211625-38211822 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 157
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 148, 118

Conread position: 4-206
Cow position: chr11:40608614-40608412 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 165
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 127, 45

Conread position: 4-208
Cow position: chr11:35536567-35536758 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 151
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 45, 0

Conread position: 4-208
Cow position: chr11:38334503-38334704 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 144
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 95, 90

Conread position: 4-209
Cow position: chr11:17638555-17638334 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 169
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 128, 199

Conread position: 4-209
Cow position: chr11:21885813-21886014 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 170
Alignm E-value: 0
Alignm gaps (pig, cow): 129, 61

Conread position: 4-209
Cow position: chr11:55494659-55494848 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 158
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 113, 0

Conread position: 4-210
Cow position: chr11:2900741-2900528 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 154
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 109, 190

Conread position: 4-215
Cow position: chr11:30964325-30964533 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 165
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 93, 38

Conread position: 4-221
Cow position: chr11:72884614-72884417 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 161
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 40, 0

Conread position: 4-222
Cow position: chr11:62812970-62812755 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 180
Alignm E-value: 0
Alignm gaps (pig, cow): 125, 0

Conread position: 4-225
Cow position: chr11:68883698-68883920 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 154
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 105, 90

Conread position: 4-228
Cow position: chr11:25783692-25783912 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 159
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 95, 90

Conread position: 4-229
Cow position: chr11:27913264-27913492 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 156
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 130, 184

Conread position: 4-229
Cow position: chr11:43914271-43914498 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 158
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 122, 184

Conread position: 4-229
Cow position: chr11:62742663-62742446 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 162
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 35, 0

Conread position: 4-229
Cow position: chr11:70206300-70206520 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 161
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 211, 67

Conread position: 4-230
Cow position: chr11:17517378-17517604 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 161
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 120, 179

Conread position: 5-131
Cow position: chr11:47882784-47882911 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 98
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 113, 0

Conread position: 5-138
Cow position: chr11:44636773-44636641 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 110
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 110, 0

Conread position: 5-139
Cow position: chr11:69075892-69076025 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 107
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 21, 0

Conread position: 5-141
Cow position: chr11:8107425-8107561 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 106
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 116, 52

Conread position: 5-146
Cow position: chr11:16342248-16342105 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 108
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 110, 0

Conread position: 5-148
Cow position: chr11:36329054-36328913 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 115
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 110, 95

Conread position: 5-167
Cow position: chr11:34121179-34121341 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 121
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 78, 98

Conread position: 5-176
Cow position: chr11:31410897-31410728 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 140
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 119, 0

Conread position: 5-177
Cow position: chr11:45646612-45646440 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 128
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 105, 49

Conread position: 5-178
Cow position: chr11:39499337-39499509 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 138
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 102, 133

Conread position: 5-195
Cow position: chr11:47772409-47772212 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 156
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 132, 189

Conread position: 5-202
Cow position: chr11:29786518-29786316 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 149
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 111, 191

Conread position: 5-202
Cow position: chr11:48248235-48248023 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 164
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 110, 187

Conread position: 5-203
Cow position: chr11:42160073-42159884 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 153
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 34, 0

Conread position: 5-206
Cow position: chr11:11558152-11558349 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 145
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 174, 0

Conread position: 5-208
Cow position: chr11:375440-375642 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 142
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 68, 52

Conread position: 5-208
Cow position: chr11:15017037-15017241 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 152
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 121, 183

Conread position: 5-208
Cow position: chr11:27405089-27404888 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 154
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 112, 39

Conread position: 5-208
Cow position: chr11:27746904-27747101 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 154
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 121, 0

Conread position: 5-208
Cow position: chr11:29960279-29960475 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 162
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 36, 0

Conread position: 5-208
Cow position: chr11:35580241-35580444 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 154
Alignm E-value: 7e-38
Alignm gaps (pig, cow): 119, 181

Conread position: 5-208
Cow position: chr11:46922905-46922704 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 160
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 98, 132

Conread position: 5-208
Cow position: chr11:49872904-49872704 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 153
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 122, 39

Conread position: 5-208
Cow position: chr11:67614941-67614742 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 157
Alignm E-value: 8.99999e-40
Alignm gaps (pig, cow): 111, 0

Conread position: 5-210
Cow position: chr11:52380891-52380687 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 161
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 181, 0

Conread position: 5-211
Cow position: chr11:27248474-27248675 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 164
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 202, 42

Conread position: 5-214
Cow position: chr11:17721821-17721609 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 171
Alignm E-value: 0
Alignm gaps (pig, cow): 110, 182

Conread position: 5-214
Cow position: chr11:47724879-47725079 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 153
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 205, 39

Conread position: 5-215
Cow position: chr11:21728295-21728099 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 162
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 25, 41

Conread position: 5-219
Cow position: chr11:44222870-44223075 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 158
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 37, 0

Conread position: 5-219
Cow position: chr11:50152833-50152620 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 174
Alignm E-value: 0
Alignm gaps (pig, cow): 111, 182

Conread position: 5-219
Cow position: chr11:63165666-63165456 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 167
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 200, 132

Conread position: 5-221
Cow position: chr11:47899249-47899446 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 165
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 95, 0

Conread position: 5-221
Cow position: chr11:71021981-71022196 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 169
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 111, 139

Conread position: 5-221
Cow position: chr11:74316690-74316901 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 161
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 97, 0

Conread position: 5-223
Cow position: chr11:52297240-52297026 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 169
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 122, 0

Conread position: 5-225
Cow position: chr11:1932511-1932287 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 182
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 185

Conread position: 5-225
Cow position: chr11:48296014-48296226 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 177
Alignm E-value: 0
Alignm gaps (pig, cow): 209, 34

Conread position: 5-225
Cow position: chr11:49255385-49255609 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 170
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 132, 68

Conread position: 5-225
Cow position: chr11:81135187-81134968 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 167
Alignm E-value: 8e-39
Alignm gaps (pig, cow): 57, 50

Conread position: 5-228
Cow position: chr11:31227943-31228157 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 166
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 200, 119

Conread position: 5-228
Cow position: chr11:62239725-62239944 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 168
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 116, 0

Conread position: 5-229
Cow position: chr11:2575923-2575701 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 155
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 201, 134

Conread position: 5-229
Cow position: chr11:63435502-63435722 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 163
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 121, 37

Conread position: 5-229
Cow position: chr11:71390580-71390370 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 167
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 66, 0

Conread position: 5-231
Cow position: chr11:1625243-1625016 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 169
Alignm E-value: 7e-38
Alignm gaps (pig, cow): 110, 90

Conread position: 5-231
Cow position: chr11:58185865-58186077 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 160
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 14, 0

Conread position: 5-231
Cow position: chr11:84385656-84385433 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 167
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 121, 30

Conread position: 5-232
Cow position: chr11:69977951-69978172 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 167
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 109, 0

Conread position: 5-236
Cow position: chr11:8437713-8437477 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 175
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 111, 185

Conread position: 5-284
Cow position: chr11:34413359-34413080 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 102
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 6-202
Cow position: chr11:30172291-30172476 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 149
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 26, 0

Conread position: 6-203
Cow position: chr11:4199253-4199452 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 138
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 121, 43

Conread position: 6-221
Cow position: chr11:905401-905188 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 170
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 177, 105

Conread position: 6-227
Cow position: chr11:64104980-64105197 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 163
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 94, 36

Conread position: 6-252
Cow position: chr11:66099881-66099629 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 171
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 118, 186

Conread position: 7-141
Cow position: chr11:30954983-30955117 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 107
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 7-151
Cow position: chr11:11523475-11523330 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 115
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 61, 42

Conread position: 7-175
Cow position: chr11:68206862-68206695 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 130
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 42, 120

Conread position: 7-202
Cow position: chr11:4637189-4636998 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 152
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 103, 0

Conread position: 7-208
Cow position: chr11:3175656-3175852 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 152
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 198, 130

Conread position: 7-208
Cow position: chr11:65157426-65157222 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 154
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 24, 183

Conread position: 7-208
Cow position: chr11:83043380-83043184 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 158
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 128, 0

Conread position: 7-227
Cow position: chr11:80923338-80923123 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 168
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 112, 35

Conread position: 7-230
Cow position: chr11:48315414-48315196 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 173
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 136, 0

Conread position: 7-231
Cow position: chr11:15285632-15285419 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 162
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 126, 0

Conread position: 8-142
Cow position: chr11:35684517-35684382 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 108
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 117, 0

Conread position: 8-195
Cow position: chr11:33289469-33289299 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 145
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 21, 0

Conread position: 8-229
Cow position: chr11:44031995-44032208 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 180
Alignm E-value: 0
Alignm gaps (pig, cow): 131, 0

Conread position: 8-229
Cow position: chr11:63478361-63478568 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 176
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 208, 49

Conread position: 8-231
Cow position: chr11:87172093-87171871 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 158
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 118, 137

Conread position: 9-178
Cow position: chr11:18792083-18791909 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 128
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 49, 0

Conread position: 9-203
Cow position: chr11:9699260-9699077 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 140
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 113, 0

Conread position: 9-203
Cow position: chr11:25620412-25620212 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 145
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 40, 184

Conread position: 9-203
Cow position: chr11:41576883-41576695 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 142
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 110, 24

Conread position: 9-208
Cow position: chr11:17195846-17195633 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 161
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 103, 86

Conread position: 9-208
Cow position: chr11:26144111-26143916 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 140
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 117, 171

Conread position: 9-210
Cow position: chr11:1067455-1067252 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 140
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 117, 179

Conread position: 9-221
Cow position: chr11:37100184-37099976 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 157
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 101, 35

Conread position: 9-222
Cow position: chr11:81041985-81041768 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 157
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 97, 78

Conread position: 9-224
Cow position: chr11:23272017-23271808 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 147
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 23, 0

Conread position: 9-227
Cow position: chr11:42084691-42084474 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 155
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 117, 180

Conread position: 9-228
Cow position: chr11:19592010-19591793 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 157
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 102, 93

Conread position: 9-232
Cow position: chr11:15366988-15366774 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 158
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 123, 0

Conread position: 10-208
Cow position: chr11:80556208-80556401 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 144
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 34, 0

Conread position: 10-225
Cow position: chr11:36092931-36092718 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 156
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 50, 116

Conread position: 11-138
Cow position: chr11:70741129-70741256 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 101
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 107, 90

Conread position: 11-208
Cow position: chr11:1980281-1980082 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 140
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 110, 178

Conread position: 11-225
Cow position: chr11:30986628-30986835 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 171
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 0

Conread position: 12-170
Cow position: chr11:73977316-73977153 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 122
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 28, 0

Conread position: 12-194
Cow position: chr11:26633026-26632844 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 131
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 114, 168

Conread position: 12-208
Cow position: chr11:20238664-20238859 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 149
Alignm E-value: 7e-38
Alignm gaps (pig, cow): 174, 0

Conread position: 12-208
Cow position: chr11:36520862-36521063 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 148
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 50, 45

Conread position: 12-208
Cow position: chr11:60296718-60296921 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 144
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 119, 37

Conread position: 12-220
Cow position: chr11:86895364-86895566 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 147
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 40, 30

Conread position: 12-221
Cow position: chr11:20117061-20117273 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 149
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 48, 83

Conread position: 12-224
Cow position: chr11:20234672-20234881 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 150
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 101, 82

Conread position: 12-233
Cow position: chr11:49396538-49396318 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 163
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 98, 83

Conread position: 12-236
Cow position: chr11:8496020-8496247 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 154
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 114, 91

Conread position: 13-196
Cow position: chr11:2835847-2836031 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 132
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 113, 175

Conread position: 13-206
Cow position: chr11:6256014-6255828 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 146
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 20, 0

Conread position: 13-230
Cow position: chr11:64781075-64781296 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 155
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 114, 175

Conread position: 13-235
Cow position: chr11:45350523-45350295 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 161
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 116, 173

Conread position: 14-221
Cow position: chr11:37425158-37424951 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 165
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 161, 30

Conread position: 15-126
Cow position: chr11:34238580-34238469 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 88
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 15-199
Cow position: chr11:60486428-60486242 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 134
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 91, 79

Conread position: 15-203
Cow position: chr11:80413022-80412831 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 136
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 104, 18

Conread position: 15-206
Cow position: chr11:34644646-34644839 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 139
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 64, 19

Conread position: 15-208
Cow position: chr11:30165500-30165694 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 139
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 37, 27

Conread position: 15-210
Cow position: chr11:36940605-36940407 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 140
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 98, 81

Conread position: 15-213
Cow position: chr11:46784465-46784651 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 143
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 38, 0

Conread position: 15-225
Cow position: chr11:31875083-31875292 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 145
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 127, 173

Conread position: 15-229
Cow position: chr11:41980214-41980003 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 149
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 110, 168

Conread position: 15-229
Cow position: chr11:59024369-59024147 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 157
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 110, 49

Conread position: 15-232
Cow position: chr11:32254226-32254010 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 156
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 108, 79

Conread position: 15-233
Cow position: chr11:34968623-34968403 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 157
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 96, 57

Conread position: 15-236
Cow position: chr11:32710505-32710727 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 150
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 106, 85

Conread position: 15-238
Cow position: chr11:21830219-21829997 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 162
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 84, 79

Conread position: 15-248
Cow position: chr11:16314863-16315100 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 166
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 98, 80

Conread position: 15-438
Cow position: chr11:78544274-78544700 (view UCSC Genome Browser custom track)
Alignm length: 429
Alignm identity: 153
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 89, 81

Conread position: 16-209
Cow position: chr11:22884405-22884590 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 146
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 28, 0

Conread position: 16-226
Cow position: chr11:63999100-63998889 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 167
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 172

Conread position: 18-123
Cow position: chr11:25320179-25320284 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 85
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 18-201
Cow position: chr11:8684086-8683902 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 128
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 108, 170

Conread position: 18-203
Cow position: chr11:63484932-63485110 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 136
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 6, 0

Conread position: 18-207
Cow position: chr11:48659928-48660112 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 134
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 119, 0

Conread position: 18-217
Cow position: chr11:69417397-69417597 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 143
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 108, 18

Conread position: 18-221
Cow position: chr11:35347759-35347555 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 142
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 95, 76

Conread position: 18-229
Cow position: chr11:12555312-12555097 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 162
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 108, 169

Conread position: 18-229
Cow position: chr11:18509037-18508823 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 154
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 108, 0

Conread position: 18-230
Cow position: chr11:18119495-18119707 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 155
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 40, 61

Conread position: 19-210
Cow position: chr11:66685911-66685725 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 143
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 43, 104

Conread position: 19-229
Cow position: chr11:76248044-76248249 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 154
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 107, 75

Conread position: 20-197
Cow position: chr11:60720460-60720282 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 135
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 86, 75

Conread position: 20-203
Cow position: chr11:49149044-49149224 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 135
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 40, 102

Conread position: 20-218
Cow position: chr11:63499131-63498939 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 144
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 24, 0

Conread position: 20-223
Cow position: chr11:75285764-75285558 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 147
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 85, 74

Conread position: 20-227
Cow position: chr11:6006308-6006511 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 142
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 31, 0

Conread position: 20-231
Cow position: chr11:24438223-24438013 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 150
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 32, 22

Conread position: 20-239
Cow position: chr11:57767186-57767404 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 157
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 183, 25

Conread position: 21-201
Cow position: chr11:2484798-2484620 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 141
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 101, 28

Conread position: 21-228
Cow position: chr11:15772718-15772510 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 153
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 6, 167

Conread position: 22-213
Cow position: chr11:21468690-21468871 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 139
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 12, 102

Conread position: 22-225
Cow position: chr11:47411839-47412045 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 145
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 112, 7

Conread position: 22-228
Cow position: chr11:6320135-6319924 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 151
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 77, 72

Conread position: 23-192
Cow position: chr11:83066486-83066659 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 130
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 108, 167

Conread position: 23-197
Cow position: chr11:21173439-21173265 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 125
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 119, 162

Conread position: 23-203
Cow position: chr11:66104397-66104215 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 144
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 41, 118

Conread position: 23-208
Cow position: chr11:13940185-13940370 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 135
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 91, 5

Conread position: 23-220
Cow position: chr11:30322494-30322300 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 136
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 130, 0

Conread position: 23-225
Cow position: chr11:66041277-66041477 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 147
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 181, 114

Conread position: 26-208
Cow position: chr11:70600827-70600644 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 131
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 117, 162

Conread position: 26-208
Cow position: chr11:79548936-79548750 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 132
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 100, 165

Conread position: 26-209
Cow position: chr11:32126613-32126800 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 134
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 87, 68

Conread position: 26-227
Cow position: chr11:80008066-80007861 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 164
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 105, 64

Conread position: 26-232
Cow position: chr11:6857730-6857939 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 145
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 87, 70

Conread position: 30-173
Cow position: chr11:1775645-1775504 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 106
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 42, 0

Conread position: 30-202
Cow position: chr11:83397911-83398084 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 124
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 96, 157

Conread position: 30-203
Cow position: chr11:40818621-40818455 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 136
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 92, 0

Conread position: 30-228
Cow position: chr11:67183653-67183858 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 145
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 105, 0

Conread position: 32-219
Cow position: chr11:30485659-30485852 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 141
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 98, 160

Conread position: 33-197
Cow position: chr11:26343110-26343274 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 120
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 91, 154

Conread position: 33-199
Cow position: chr11:15279004-15278844 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 128
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 91, 0

Conread position: 33-202
Cow position: chr11:18910877-18910706 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 131
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 25, 96

Conread position: 33-208
Cow position: chr11:19148128-19147959 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 126
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 63, 0

Conread position: 33-208
Cow position: chr11:47310977-47310801 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 127
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 80, 62

Conread position: 33-208
Cow position: chr11:74152746-74152565 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 134
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 95, 157

Conread position: 33-208
Cow position: chr11:80296844-80296676 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 137
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 73, 102

Conread position: 33-222
Cow position: chr11:5176368-5176186 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 136
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 72, 61

Conread position: 33-223
Cow position: chr11:71814715-71814899 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 141
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 89, 0

Conread position: 33-228
Cow position: chr11:42206430-42206618 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 156
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 91, 0

Conread position: 33-229
Cow position: chr11:5219152-5218961 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 140
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 162, 91

Conread position: 33-231
Cow position: chr11:29782174-29782361 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 148
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 88, 54

Conread position: 33-237
Cow position: chr11:70756486-70756686 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 142
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 172, 89

Conread position: 34-209
Cow position: chr11:13684701-13684537 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 130
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 80, 0

Conread position: 34-219
Cow position: chr11:32108679-32108494 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 132
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 92, 60

Conread position: 35-225
Cow position: chr11:36104323-36104508 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 150
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 31, 146

Conread position: 36-177
Cow position: chr11:34136252-34136394 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 110
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 74, 66

Conread position: 36-209
Cow position: chr11:68570369-68570197 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 124
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 88, 121

Conread position: 36-213
Cow position: chr11:75388363-75388189 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 132
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 43, 104

Conread position: 36-222
Cow position: chr11:4411857-4411669 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 146
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 139, 81

Conread position: 36-225
Cow position: chr11:1380687-1380880 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 137
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 91, 152

Conread position: 36-229
Cow position: chr11:4621419-4621234 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 148
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 87, 0

Conread position: 36-231
Cow position: chr11:38223776-38223589 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 140
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 55, 0

Conread position: 37-209
Cow position: chr11:74839623-74839787 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 139
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 91, 0

Conread position: 37-219
Cow position: chr11:26535799-26535978 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 131
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 62, 42

Conread position: 37-221
Cow position: chr11:23278952-23278767 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 153
Alignm E-value: 7e-38
Alignm gaps (pig, cow): 88, 119

Conread position: 37-221
Cow position: chr11:47110261-47110451 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 140
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 88, 157

Conread position: 37-224
Cow position: chr11:37041984-37042171 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 144
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 89, 146

Conread position: 37-225
Cow position: chr11:11483325-11483521 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 156
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 84, 13

Conread position: 37-225
Cow position: chr11:78381052-78380869 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 134
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 62, 57

Conread position: 37-228
Cow position: chr11:26057638-26057441 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 146
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 86, 153

Conread position: 37-229
Cow position: chr11:81143529-81143338 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 139
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 31, 86

Conread position: 38-208
Cow position: chr11:49057404-49057566 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 129
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 13, 87

Conread position: 38-209
Cow position: chr11:25721981-25721821 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 136
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 19, 0

Conread position: 38-225
Cow position: chr11:63849938-63849748 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 136
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 95, 150

Conread position: 38-227
Cow position: chr11:42066878-42067066 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 146
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 148, 0

Conread position: 38-228
Cow position: chr11:32800639-32800834 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 139
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 93, 150

Conread position: 38-228
Cow position: chr11:35733070-35732879 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 142
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 93, 149

Conread position: 38-230
Cow position: chr11:44615154-44614962 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 148
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 32, 91

Conread position: 39-192
Cow position: chr11:78672685-78672838 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 123
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 72, 101

Conread position: 39-208
Cow position: chr11:15591460-15591297 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 132
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 83, 0

Conread position: 39-209
Cow position: chr11:83249417-83249579 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 126
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 122, 96

Conread position: 39-219
Cow position: chr11:54872745-54872567 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 147
Alignm E-value: 8e-39
Alignm gaps (pig, cow): 48, 33

Conread position: 39-226
Cow position: chr11:53651655-53651841 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 146
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 87, 137

Conread position: 39-241
Cow position: chr11:37490562-37490371 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 142
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 130, 0

Conread position: 40-206
Cow position: chr11:53487138-53486979 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 135
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 133, 63

Conread position: 40-218
Cow position: chr11:68909840-68909659 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 133
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 12, 56

Conread position: 40-229
Cow position: chr11:63201269-63201460 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 136
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 120, 95

Conread position: 41-209
Cow position: chr11:43965861-43965706 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 129
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 72, 63

Conread position: 43-226
Cow position: chr11:17309421-17309600 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 140
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 93, 25

Conread position: 44-183
Cow position: chr11:62081948-62081813 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 106
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 91, 0

Conread position: 44-187
Cow position: chr11:7617187-7617045 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 116
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 14, 94

Conread position: 44-217
Cow position: chr11:71191990-71192164 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 125
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 80, 144

Conread position: 44-227
Cow position: chr11:63475653-63475470 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 132
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 82, 144

Conread position: 44-229
Cow position: chr11:8422098-8421920 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 143
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 177, 78

Conread position: 44-229
Cow position: chr11:62483942-62483771 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 137
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 72, 0

Conread position: 44-231
Cow position: chr11:25968834-25968648 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 135
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 96, 19

Conread position: 45-203
Cow position: chr11:33369171-33369330 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 123
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 81, 143

Conread position: 45-208
Cow position: chr11:63695825-63695655 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 127
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 53, 148

Conread position: 45-209
Cow position: chr11:30857058-30857219 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 128
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 48, 97

Conread position: 46-208
Cow position: chr11:36300560-36300401 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 119
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 75, 134

Conread position: 46-221
Cow position: chr11:5559303-5559477 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 129
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 55, 48

Conread position: 46-231
Cow position: chr11:62606438-62606623 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 133
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 54, 48

Conread position: 49-229
Cow position: chr11:42236257-42236078 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 134
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 66, 37

Conread position: 49-233
Cow position: chr11:42183056-42183247 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 148
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 75, 145

Conread position: 51-208
Cow position: chr11:64334862-64335013 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 122
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 7, 75

Conread position: 51-216
Cow position: chr11:18924772-18924938 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 126
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 62, 43

Conread position: 51-222
Cow position: chr11:63483969-63484137 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 135
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 73, 0

Conread position: 51-224
Cow position: chr11:34778417-34778244 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 126
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 62, 43

Conread position: 51-225
Cow position: chr11:62964520-62964692 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 131
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 53, 26

Conread position: 51-226
Cow position: chr11:17553054-17552878 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 127
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 63, 43

Conread position: 51-226
Cow position: chr11:73573672-73573851 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 130
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 62, 43

Conread position: 51-229
Cow position: chr11:42016613-42016435 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 129
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 75, 140

Conread position: 51-230
Cow position: chr11:62102421-62102239 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 133
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 75, 137

Conread position: 51-231
Cow position: chr11:36361616-36361438 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 139
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 54, 43

Conread position: 51-232
Cow position: chr11:36847194-36847375 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 136
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 76, 43

Conread position: 52-221
Cow position: chr11:15881393-15881226 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 129
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 60, 42

Conread position: 52-229
Cow position: chr11:21590413-21590591 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 130
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 61, 42

Conread position: 52-229
Cow position: chr11:83028021-83028194 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 136
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 69, 110

Conread position: 52-231
Cow position: chr11:44176623-44176798 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 134
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 74, 110

Conread position: 55-210
Cow position: chr11:12768429-12768581 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 122
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 55, 0

Conread position: 55-220
Cow position: chr11:34233477-34233639 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 123
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 151, 67

Conread position: 58-203
Cow position: chr11:81340507-81340366 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 116
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 64, 0

Conread position: 58-221
Cow position: chr11:63491051-63491216 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 126
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 51, 36

Conread position: 58-224
Cow position: chr11:42497877-42498044 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 125
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 55, 36

Conread position: 58-231
Cow position: chr11:24551424-24551593 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 133
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 48, 19

Conread position: 59-161
Cow position: chr11:53606374-53606270 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 87
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 66, 0

Conread position: 59-197
Cow position: chr11:43641421-43641560 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 109
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 68, 129

Conread position: 59-208
Cow position: chr11:2830691-2830839 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 114
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 127, 0

Conread position: 59-231
Cow position: chr11:25209431-25209597 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 137
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 148, 13

Conread position: 61-177
Cow position: chr11:68312968-68313080 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 96
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 55, 83

Conread position: 61-194
Cow position: chr11:34144888-34144750 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 109
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 68, 131

Conread position: 61-202
Cow position: chr11:85986013-85985872 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 116
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 33, 126

Conread position: 61-203
Cow position: chr11:70821081-70821222 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 116
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 75, 38

Conread position: 61-207
Cow position: chr11:1842000-1842140 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 113
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 142, 61

Conread position: 61-208
Cow position: chr11:41213086-41213235 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 112
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 55, 128

Conread position: 61-208
Cow position: chr11:42786652-42786499 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 119
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 66, 53

Conread position: 61-208
Cow position: chr11:51683252-51683399 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 114
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 45, 33

Conread position: 61-210
Cow position: chr11:4653218-4653075 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 113
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 63, 0

Conread position: 61-221
Cow position: chr11:5217425-5217264 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 120
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 52, 34

Conread position: 61-221
Cow position: chr11:33824869-33824718 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 121
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 44, 0

Conread position: 61-221
Cow position: chr11:44016280-44016442 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 122
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 73, 127

Conread position: 61-223
Cow position: chr11:17369567-17369724 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 123
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 65, 0

Conread position: 61-225
Cow position: chr11:28078530-28078690 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 126
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 146, 63

Conread position: 61-228
Cow position: chr11:33271467-33271630 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 122
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 55, 0

Conread position: 61-231
Cow position: chr11:35544121-35544291 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 126
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 52, 33

Conread position: 61-234
Cow position: chr11:21124574-21124404 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 128
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 65, 127

Conread position: 62-225
Cow position: chr11:41134042-41133879 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 118
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 143, 124

Conread position: 62-240
Cow position: chr11:64096628-64096453 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 136
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 63, 119

Conread position: 63-207
Cow position: chr11:73637893-73638037 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 115
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 68, 19

Conread position: 63-208
Cow position: chr11:82733111-82732967 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 116
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 125, 61

Conread position: 63-209
Cow position: chr11:26823148-26823296 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 111
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 58, 126

Conread position: 63-209
Cow position: chr11:38657145-38656998 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 109
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 63, 125

Conread position: 63-217
Cow position: chr11:81928469-81928320 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 126
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 110, 35

Conread position: 64-228
Cow position: chr11:80695203-80695040 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 120
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 72, 124

Conread position: 64-229
Cow position: chr11:4602192-4602352 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 130
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 107, 60

Conread position: 65-217
Cow position: chr11:9691045-9691201 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 125
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 59, 112

Conread position: 65-222
Cow position: chr11:62655733-62655889 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 127
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 6, 63

Conread position: 66-203
Cow position: chr11:13049213-13049081 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 106
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 36, 0

Conread position: 67-202
Cow position: chr11:899476-899613 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 109
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 32, 27

Conread position: 67-208
Cow position: chr11:18154509-18154374 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 112
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 6, 0

Conread position: 70-202
Cow position: chr11:63977103-63977232 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 109
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 65, 0

Conread position: 70-208
Cow position: chr11:65431564-65431700 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 114
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 55, 0

Conread position: 70-221
Cow position: chr11:53460742-53460894 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 117
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 40, 24

Conread position: 70-224
Cow position: chr11:32587078-32586927 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 124
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 54, 0

Conread position: 70-228
Cow position: chr11:6784254-6784405 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 129
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 25, 0

Conread position: 70-229
Cow position: chr11:15745040-15744881 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 117
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 35, 25

Conread position: 71-227
Cow position: chr11:49568185-49568034 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 119
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 47, 73

Conread position: 71-228
Cow position: chr11:80399895-80400050 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 115
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 39, 0

Conread position: 74-212
Cow position: chr11:83323628-83323764 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 112
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 19, 63

Conread position: 75-228
Cow position: chr11:46978345-46978200 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 122
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 102, 27

Conread position: 78-208
Cow position: chr11:68592071-68592202 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 107
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 52, 110

Conread position: 79-218
Cow position: chr11:57873863-57874001 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 107
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 107, 0

Conread position: 79-228
Cow position: chr11:60488333-60488484 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 118
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 48, 111

Conread position: 80-206
Cow position: chr11:43594373-43594247 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 100
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 37, 107

Conread position: 81-203
Cow position: chr11:6154627-6154746 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 99
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 55, 0

Conread position: 83-224
Cow position: chr11:43737049-43736908 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 121
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 47, 15

Conread position: 84-209
Cow position: chr11:80823970-80824087 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 106
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 5, 0

Conread position: 86-225
Cow position: chr11:3704510-3704648 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 108
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 31, 47

Conread position: 90-235
Cow position: chr11:63546887-63547030 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 115
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 124, 51

Conread position: 91-210
Cow position: chr11:6638932-6638818 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 100
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 84, 30

Conread position: 104-229
Cow position: chr11:28092529-28092655 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 100
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 26, 84

Conread position: 106-224
Cow position: chr11:55830147-55830028 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 96
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 20, 82

Conread position: 123-241
Cow position: chr11:54219106-54219223 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 96
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 111, 63

Show alignments to all cow chromosomes.