Cow genome map

Conread name: rcje38_p18.y1

Conread position: 1-111
Cow position:
Alignm length: 111
Alignm identity: 90
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 1-123
Cow position:
Alignm length: 123
Alignm identity: 98
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 43, 0

Conread position: 1-124
Cow position:
Alignm length: 124
Alignm identity: 95
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 1-136
Cow position:
Alignm length: 136
Alignm identity: 100
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 1-140
Cow position:
Alignm length: 140
Alignm identity: 111
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 65, 0

Conread position: 1-141
Cow position:
Alignm length: 141
Alignm identity: 108
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 28, 0

Conread position: 1-141
Cow position:
Alignm length: 142
Alignm identity: 108
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 5, 0

Conread position: 1-141
Cow position:
Alignm length: 141
Alignm identity: 114
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 0, 0

Conread position: 1-141
Cow position:
Alignm length: 141
Alignm identity: 111
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 1-141
Cow position:
Alignm length: 141
Alignm identity: 102
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 1-141
Cow position:
Alignm length: 141
Alignm identity: 104
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 1-145
Cow position:
Alignm length: 145
Alignm identity: 118
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 0, 0

Conread position: 1-161
Cow position:
Alignm length: 161
Alignm identity: 123
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 43, 0

Conread position: 1-172
Cow position:
Alignm length: 172
Alignm identity: 122
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 66, 0

Conread position: 1-173
Cow position:
Alignm length: 177
Alignm identity: 127
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 159, 18

Conread position: 1-178
Cow position:
Alignm length: 178
Alignm identity: 127
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 115, 0

Conread position: 1-196
Cow position:
Alignm length: 197
Alignm identity: 150
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 21, 128

Conread position: 1-196
Cow position:
Alignm length: 196
Alignm identity: 146
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 23, 0

Conread position: 1-196
Cow position:
Alignm length: 196
Alignm identity: 154
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 121, 0

Conread position: 1-196
Cow position:
Alignm length: 196
Alignm identity: 151
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 99, 0

Conread position: 1-197
Cow position:
Alignm length: 197
Alignm identity: 140
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 115, 0

Conread position: 1-202
Cow position:
Alignm length: 202
Alignm identity: 152
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 83, 0

Conread position: 1-203
Cow position:
Alignm length: 205
Alignm identity: 146
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 119, 169

Conread position: 1-203
Cow position:
Alignm length: 203
Alignm identity: 145
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 43, 0

Conread position: 1-203
Cow position:
Alignm length: 204
Alignm identity: 162
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 159, 115

Conread position: 1-203
Cow position:
Alignm length: 203
Alignm identity: 151
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 108, 0

Conread position: 1-203
Cow position:
Alignm length: 203
Alignm identity: 159
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 121, 0

Conread position: 1-207
Cow position:
Alignm length: 209
Alignm identity: 153
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 67, 74

Conread position: 1-208
Cow position:
Alignm length: 209
Alignm identity: 164
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 93, 125

Conread position: 1-208
Cow position:
Alignm length: 211
Alignm identity: 167
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 103, 60

Conread position: 1-208
Cow position:
Alignm length: 210
Alignm identity: 153
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 125, 147

Conread position: 1-208
Cow position:
Alignm length: 208
Alignm identity: 161
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 113, 0

Conread position: 1-208
Cow position:
Alignm length: 208
Alignm identity: 151
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 123, 0

Conread position: 1-208
Cow position:
Alignm length: 209
Alignm identity: 163
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 56, 100

Conread position: 1-208
Cow position:
Alignm length: 211
Alignm identity: 144
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 109, 166

Conread position: 1-208
Cow position:
Alignm length: 208
Alignm identity: 157
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 43, 0

Conread position: 1-209
Cow position:
Alignm length: 209
Alignm identity: 166
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 41, 0

Conread position: 1-209
Cow position:
Alignm length: 209
Alignm identity: 160
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 92, 0

Conread position: 1-209
Cow position:
Alignm length: 210
Alignm identity: 156
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 109, 94

Conread position: 1-209
Cow position:
Alignm length: 210
Alignm identity: 160
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 142, 53

Conread position: 1-209
Cow position:
Alignm length: 211
Alignm identity: 164
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 135, 13

Conread position: 1-209
Cow position:
Alignm length: 212
Alignm identity: 157
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 108, 188

Conread position: 1-209
Cow position:
Alignm length: 223
Alignm identity: 165
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 56, 146

Conread position: 1-209
Cow position:
Alignm length: 212
Alignm identity: 145
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 108, 8

Conread position: 1-210
Cow position:
Alignm length: 214
Alignm identity: 155
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 26, 20

Conread position: 1-212
Cow position:
Alignm length: 212
Alignm identity: 155
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 138, 0

Conread position: 1-213
Cow position:
Alignm length: 215
Alignm identity: 164
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 22, 57

Conread position: 1-213
Cow position:
Alignm length: 215
Alignm identity: 164
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 22, 57

Conread position: 1-214
Cow position:
Alignm length: 216
Alignm identity: 178
Alignm E-value: 0
Alignm gaps (pig, cow): 123, 30

Conread position: 1-216
Cow position:
Alignm length: 217
Alignm identity: 161
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 204, 19

Conread position: 1-217
Cow position:
Alignm length: 222
Alignm identity: 166
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 23, 128

Conread position: 1-217
Cow position:
Alignm length: 218
Alignm identity: 164
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 134, 48

Conread position: 1-217
Cow position:
Alignm length: 217
Alignm identity: 167
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 43, 0

Conread position: 1-218
Cow position:
Alignm length: 218
Alignm identity: 167
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 100, 0

Conread position: 1-219
Cow position:
Alignm length: 221
Alignm identity: 153
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 125, 187

Conread position: 1-220
Cow position:
Alignm length: 220
Alignm identity: 157
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 21, 0

Conread position: 1-220
Cow position:
Alignm length: 220
Alignm identity: 170
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 123, 0

Conread position: 1-221
Cow position:
Alignm length: 221
Alignm identity: 177
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 0

Conread position: 1-221
Cow position:
Alignm length: 224
Alignm identity: 174
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 150, 78

Conread position: 1-225
Cow position:
Alignm length: 230
Alignm identity: 168
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 52, 188

Conread position: 1-225
Cow position:
Alignm length: 235
Alignm identity: 178
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 32, 118

Conread position: 1-226
Cow position:
Alignm length: 226
Alignm identity: 181
Alignm E-value: 0
Alignm gaps (pig, cow): 108, 0

Conread position: 1-226
Cow position:
Alignm length: 226
Alignm identity: 178
Alignm E-value: 0
Alignm gaps (pig, cow): 123, 0

Conread position: 1-227
Cow position:
Alignm length: 229
Alignm identity: 181
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 43

Conread position: 1-227
Cow position:
Alignm length: 227
Alignm identity: 182
Alignm E-value: 0
Alignm gaps (pig, cow): 123, 0

Conread position: 1-227
Cow position:
Alignm length: 238
Alignm identity: 165
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 128, 71

Conread position: 1-227
Cow position:
Alignm length: 228
Alignm identity: 174
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 170, 119

Conread position: 1-228
Cow position:
Alignm length: 236
Alignm identity: 182
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 132, 193

Conread position: 1-228
Cow position:
Alignm length: 232
Alignm identity: 163
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 105, 89

Conread position: 1-228
Cow position:
Alignm length: 235
Alignm identity: 162
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 125, 37

Conread position: 1-228
Cow position:
Alignm length: 228
Alignm identity: 167
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 115, 0

Conread position: 1-228
Cow position:
Alignm length: 228
Alignm identity: 161
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 123, 0

Conread position: 1-228
Cow position:
Alignm length: 229
Alignm identity: 173
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 102, 14

Conread position: 1-229
Cow position:
Alignm length: 234
Alignm identity: 171
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 76, 51

Conread position: 1-229
Cow position:
Alignm length: 233
Alignm identity: 169
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 31, 123

Conread position: 1-229
Cow position:
Alignm length: 230
Alignm identity: 154
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 127, 96

Conread position: 1-229
Cow position:
Alignm length: 229
Alignm identity: 166
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 84, 0

Conread position: 1-229
Cow position:
Alignm length: 229
Alignm identity: 184
Alignm E-value: 0
Alignm gaps (pig, cow): 123, 0

Conread position: 1-229
Cow position:
Alignm length: 230
Alignm identity: 164
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 221, 26

Conread position: 1-229
Cow position:
Alignm length: 232
Alignm identity: 156
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 112, 93

Conread position: 1-230
Cow position:
Alignm length: 233
Alignm identity: 167
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 123, 31

Conread position: 1-230
Cow position:
Alignm length: 236
Alignm identity: 160
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 53, 140

Conread position: 1-230
Cow position:
Alignm length: 231
Alignm identity: 175
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 47, 95

Conread position: 1-231
Cow position:
Alignm length: 233
Alignm identity: 171
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 24, 42

Conread position: 1-231
Cow position:
Alignm length: 231
Alignm identity: 175
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 134, 0

Conread position: 1-235
Cow position:
Alignm length: 238
Alignm identity: 168
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 125, 77

Conread position: 1-239
Cow position:
Alignm length: 241
Alignm identity: 176
Alignm E-value: 9e-38
Alignm gaps (pig, cow): 167, 93

Conread position: 1-268
Cow position:
Alignm length: 270
Alignm identity: 202
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 217, 136

Conread position: 2-219
Cow position:
Alignm length: 221
Alignm identity: 174
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 47, 7

Conread position: 3-207
Cow position:
Alignm length: 207
Alignm identity: 147
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 43, 85

Conread position: 4-114
Cow position:
Alignm length: 111
Alignm identity: 88
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 4-141
Cow position:
Alignm length: 138
Alignm identity: 101
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 4-141
Cow position:
Alignm length: 139
Alignm identity: 111
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 111, 52

Conread position: 4-195
Cow position:
Alignm length: 196
Alignm identity: 144
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 132, 186

Conread position: 4-197
Cow position:
Alignm length: 194
Alignm identity: 143
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 7, 0

Conread position: 4-197
Cow position:
Alignm length: 196
Alignm identity: 137
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 14, 119

Conread position: 4-202
Cow position:
Alignm length: 201
Alignm identity: 148
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 122, 184

Conread position: 4-203
Cow position:
Alignm length: 200
Alignm identity: 150
Alignm E-value: 9e-38
Alignm gaps (pig, cow): 180, 0

Conread position: 4-203
Cow position:
Alignm length: 200
Alignm identity: 146
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 40, 0

Conread position: 4-208
Cow position:
Alignm length: 209
Alignm identity: 151
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 147, 120

Conread position: 4-208
Cow position:
Alignm length: 207
Alignm identity: 156
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 167, 100

Conread position: 4-209
Cow position:
Alignm length: 206
Alignm identity: 159
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 45, 0

Conread position: 4-209
Cow position:
Alignm length: 206
Alignm identity: 150
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 55, 0

Conread position: 4-209
Cow position:
Alignm length: 208
Alignm identity: 143
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 122, 181

Conread position: 4-210
Cow position:
Alignm length: 208
Alignm identity: 159
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 169, 125

Conread position: 4-212
Cow position:
Alignm length: 214
Alignm identity: 166
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 112, 0

Conread position: 4-226
Cow position:
Alignm length: 230
Alignm identity: 162
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 122, 184

Conread position: 4-228
Cow position:
Alignm length: 232
Alignm identity: 163
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 80, 92

Conread position: 4-229
Cow position:
Alignm length: 226
Alignm identity: 174
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 120, 0

Conread position: 4-231
Cow position:
Alignm length: 234
Alignm identity: 165
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 122, 33

Conread position: 4-231
Cow position:
Alignm length: 228
Alignm identity: 186
Alignm E-value: 0
Alignm gaps (pig, cow): 118, 0

Conread position: 5-111
Cow position:
Alignm length: 107
Alignm identity: 89
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 5-135
Cow position:
Alignm length: 131
Alignm identity: 100
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 108, 0

Conread position: 5-154
Cow position:
Alignm length: 151
Alignm identity: 116
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 67, 107

Conread position: 5-202
Cow position:
Alignm length: 198
Alignm identity: 139
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 39, 0

Conread position: 5-202
Cow position:
Alignm length: 198
Alignm identity: 150
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 42, 0

Conread position: 5-204
Cow position:
Alignm length: 209
Alignm identity: 160
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 107, 38

Conread position: 5-206
Cow position:
Alignm length: 205
Alignm identity: 148
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 101, 42

Conread position: 5-207
Cow position:
Alignm length: 203
Alignm identity: 145
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 28, 0

Conread position: 5-208
Cow position:
Alignm length: 207
Alignm identity: 153
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 69, 114

Conread position: 5-208
Cow position:
Alignm length: 204
Alignm identity: 139
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 30, 0

Conread position: 5-208
Cow position:
Alignm length: 204
Alignm identity: 169
Alignm E-value: 0
Alignm gaps (pig, cow): 119, 0

Conread position: 5-208
Cow position:
Alignm length: 205
Alignm identity: 154
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 54, 28

Conread position: 5-208
Cow position:
Alignm length: 206
Alignm identity: 160
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 110, 121

Conread position: 5-208
Cow position:
Alignm length: 206
Alignm identity: 144
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 184, 39

Conread position: 5-208
Cow position:
Alignm length: 209
Alignm identity: 147
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 45, 19

Conread position: 5-208
Cow position:
Alignm length: 204
Alignm identity: 160
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 61, 0

Conread position: 5-208
Cow position:
Alignm length: 204
Alignm identity: 151
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 38, 0

Conread position: 5-208
Cow position:
Alignm length: 204
Alignm identity: 161
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 25, 0

Conread position: 5-209
Cow position:
Alignm length: 205
Alignm identity: 154
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 115, 0

Conread position: 5-215
Cow position:
Alignm length: 213
Alignm identity: 154
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 177, 39

Conread position: 5-221
Cow position:
Alignm length: 234
Alignm identity: 175
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 19, 191

Conread position: 5-221
Cow position:
Alignm length: 219
Alignm identity: 174
Alignm E-value: 0
Alignm gaps (pig, cow): 210, 25

Conread position: 5-221
Cow position:
Alignm length: 219
Alignm identity: 157
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 204, 17

Conread position: 5-221
Cow position:
Alignm length: 218
Alignm identity: 172
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 168, 132

Conread position: 5-224
Cow position:
Alignm length: 220
Alignm identity: 177
Alignm E-value: 0
Alignm gaps (pig, cow): 119, 0

Conread position: 5-225
Cow position:
Alignm length: 235
Alignm identity: 172
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 112, 51

Conread position: 5-225
Cow position:
Alignm length: 221
Alignm identity: 167
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 24, 0

Conread position: 5-228
Cow position:
Alignm length: 224
Alignm identity: 158
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 81, 0

Conread position: 5-229
Cow position:
Alignm length: 225
Alignm identity: 157
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 117, 0

Conread position: 5-230
Cow position:
Alignm length: 232
Alignm identity: 158
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 117, 184

Conread position: 5-230
Cow position:
Alignm length: 229
Alignm identity: 171
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 121, 73

Conread position: 5-231
Cow position:
Alignm length: 228
Alignm identity: 174
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 49, 39

Conread position: 5-238
Cow position:
Alignm length: 239
Alignm identity: 174
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 110, 99

Conread position: 5-239
Cow position:
Alignm length: 236
Alignm identity: 179
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 199, 50

Conread position: 5-252
Cow position:
Alignm length: 250
Alignm identity: 186
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 19, 74

Conread position: 6-208
Cow position:
Alignm length: 211
Alignm identity: 161
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 121, 67

Conread position: 6-209
Cow position:
Alignm length: 207
Alignm identity: 161
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 54, 122

Conread position: 6-210
Cow position:
Alignm length: 214
Alignm identity: 159
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 20, 156

Conread position: 6-233
Cow position:
Alignm length: 228
Alignm identity: 158
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 110, 0

Conread position: 7-165
Cow position:
Alignm length: 159
Alignm identity: 120
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 135, 0

Conread position: 7-182
Cow position:
Alignm length: 176
Alignm identity: 127
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 19, 0

Conread position: 7-206
Cow position:
Alignm length: 202
Alignm identity: 159
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 131, 42

Conread position: 7-208
Cow position:
Alignm length: 202
Alignm identity: 147
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 12, 0

Conread position: 7-208
Cow position:
Alignm length: 202
Alignm identity: 154
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 116, 0

Conread position: 7-217
Cow position:
Alignm length: 211
Alignm identity: 163
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 130, 0

Conread position: 7-228
Cow position:
Alignm length: 222
Alignm identity: 174
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 117, 0

Conread position: 7-229
Cow position:
Alignm length: 229
Alignm identity: 181
Alignm E-value: 0
Alignm gaps (pig, cow): 123, 37

Conread position: 7-230
Cow position:
Alignm length: 231
Alignm identity: 165
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 131, 185

Conread position: 7-231
Cow position:
Alignm length: 227
Alignm identity: 163
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 197, 116

Conread position: 7-231
Cow position:
Alignm length: 226
Alignm identity: 163
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 186, 55

Conread position: 8-207
Cow position:
Alignm length: 200
Alignm identity: 162
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 93, 0

Conread position: 8-225
Cow position:
Alignm length: 218
Alignm identity: 159
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 87, 0

Conread position: 9-175
Cow position:
Alignm length: 169
Alignm identity: 119
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 117, 0

Conread position: 9-203
Cow position:
Alignm length: 198
Alignm identity: 138
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 113, 178

Conread position: 9-208
Cow position:
Alignm length: 200
Alignm identity: 149
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 113, 0

Conread position: 9-208
Cow position:
Alignm length: 203
Alignm identity: 144
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 90, 33

Conread position: 9-208
Cow position:
Alignm length: 208
Alignm identity: 143
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 40, 70

Conread position: 9-236
Cow position:
Alignm length: 231
Alignm identity: 159
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 90, 85

Conread position: 10-124
Cow position:
Alignm length: 115
Alignm identity: 91
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 33, 0

Conread position: 10-132
Cow position:
Alignm length: 123
Alignm identity: 96
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 13, 0

Conread position: 10-181
Cow position:
Alignm length: 175
Alignm identity: 127
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 105, 0

Conread position: 10-203
Cow position:
Alignm length: 194
Alignm identity: 142
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 87, 0

Conread position: 10-231
Cow position:
Alignm length: 225
Alignm identity: 165
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 115, 170

Conread position: 10-240
Cow position:
Alignm length: 234
Alignm identity: 174
Alignm E-value: 9e-38
Alignm gaps (pig, cow): 194, 114

Conread position: 11-217
Cow position:
Alignm length: 208
Alignm identity: 157
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 178, 125

Conread position: 12-196
Cow position:
Alignm length: 185
Alignm identity: 141
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 42, 0

Conread position: 12-229
Cow position:
Alignm length: 220
Alignm identity: 159
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 192, 174

Conread position: 13-199
Cow position:
Alignm length: 189
Alignm identity: 135
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 97, 82

Conread position: 15-214
Cow position:
Alignm length: 204
Alignm identity: 149
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 91, 44

Conread position: 15-219
Cow position:
Alignm length: 208
Alignm identity: 146
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 119, 80

Conread position: 15-225
Cow position:
Alignm length: 215
Alignm identity: 150
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 89, 79

Conread position: 15-228
Cow position:
Alignm length: 218
Alignm identity: 145
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 112, 173

Conread position: 15-229
Cow position:
Alignm length: 224
Alignm identity: 158
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 84, 79

Conread position: 15-231
Cow position:
Alignm length: 220
Alignm identity: 151
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 192, 121

Conread position: 15-231
Cow position:
Alignm length: 225
Alignm identity: 157
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 46, 85

Conread position: 15-232
Cow position:
Alignm length: 219
Alignm identity: 155
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 128, 172

Conread position: 16-214
Cow position:
Alignm length: 201
Alignm identity: 138
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 96, 8

Conread position: 18-221
Cow position:
Alignm length: 206
Alignm identity: 147
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 12, 109

Conread position: 18-221
Cow position:
Alignm length: 205
Alignm identity: 150
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 88, 6

Conread position: 18-221
Cow position:
Alignm length: 205
Alignm identity: 148
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 6, 107

Conread position: 18-229
Cow position:
Alignm length: 217
Alignm identity: 149
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 113, 169

Conread position: 18-230
Cow position:
Alignm length: 213
Alignm identity: 146
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 120, 0

Conread position: 18-267
Cow position:
Alignm length: 255
Alignm identity: 183
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 48, 66

Conread position: 20-208
Cow position:
Alignm length: 189
Alignm identity: 141
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 104, 0

Conread position: 20-222
Cow position:
Alignm length: 203
Alignm identity: 142
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 31, 0

Conread position: 20-224
Cow position:
Alignm length: 206
Alignm identity: 144
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 85, 74

Conread position: 20-229
Cow position:
Alignm length: 210
Alignm identity: 147
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 96, 0

Conread position: 20-233
Cow position:
Alignm length: 221
Alignm identity: 155
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 107, 173

Conread position: 22-213
Cow position:
Alignm length: 194
Alignm identity: 147
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 93, 159

Conread position: 23-230
Cow position:
Alignm length: 212
Alignm identity: 152
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 76, 163

Conread position: 23-235
Cow position:
Alignm length: 215
Alignm identity: 166
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 9, 101

Conread position: 26-208
Cow position:
Alignm length: 192
Alignm identity: 138
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 73, 68

Conread position: 26-208
Cow position:
Alignm length: 187
Alignm identity: 134
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 105, 51

Conread position: 26-223
Cow position:
Alignm length: 198
Alignm identity: 139
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 68, 0

Conread position: 26-229
Cow position:
Alignm length: 207
Alignm identity: 145
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 117, 161

Conread position: 26-249
Cow position:
Alignm length: 226
Alignm identity: 166
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 198, 5

Conread position: 26-252
Cow position:
Alignm length: 236
Alignm identity: 164
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 59, 167

Conread position: 29-231
Cow position:
Alignm length: 205
Alignm identity: 157
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 176, 101

Conread position: 32-225
Cow position:
Alignm length: 200
Alignm identity: 143
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 28, 159

Conread position: 33-196
Cow position:
Alignm length: 166
Alignm identity: 119
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 98, 155

Conread position: 33-207
Cow position:
Alignm length: 175
Alignm identity: 136
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 89, 0

Conread position: 33-217
Cow position:
Alignm length: 189
Alignm identity: 138
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 93, 155

Conread position: 33-218
Cow position:
Alignm length: 189
Alignm identity: 132
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 72, 62

Conread position: 33-221
Cow position:
Alignm length: 190
Alignm identity: 149
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 172, 72

Conread position: 33-225
Cow position:
Alignm length: 193
Alignm identity: 138
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 91, 0

Conread position: 33-229
Cow position:
Alignm length: 201
Alignm identity: 140
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 80, 63

Conread position: 33-231
Cow position:
Alignm length: 201
Alignm identity: 147
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 104, 13

Conread position: 33-232
Cow position:
Alignm length: 203
Alignm identity: 143
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 171, 153

Conread position: 36-231
Cow position:
Alignm length: 200
Alignm identity: 144
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 86, 58

Conread position: 37-208
Cow position:
Alignm length: 172
Alignm identity: 132
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 98, 0

Conread position: 37-228
Cow position:
Alignm length: 196
Alignm identity: 137
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 89, 151

Conread position: 37-229
Cow position:
Alignm length: 193
Alignm identity: 151
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 91, 0

Conread position: 37-231
Cow position:
Alignm length: 196
Alignm identity: 152
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 14, 101

Conread position: 39-187
Cow position:
Alignm length: 158
Alignm identity: 121
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 91, 0

Conread position: 39-203
Cow position:
Alignm length: 165
Alignm identity: 129
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 71, 0

Conread position: 39-209
Cow position:
Alignm length: 179
Alignm identity: 141
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 98, 155

Conread position: 39-220
Cow position:
Alignm length: 182
Alignm identity: 142
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 83, 0

Conread position: 39-230
Cow position:
Alignm length: 193
Alignm identity: 142
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 178, 95

Conread position: 39-231
Cow position:
Alignm length: 193
Alignm identity: 136
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 84, 0

Conread position: 39-231
Cow position:
Alignm length: 197
Alignm identity: 139
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 23, 150

Conread position: 40-225
Cow position:
Alignm length: 197
Alignm identity: 143
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 98, 154

Conread position: 41-208
Cow position:
Alignm length: 171
Alignm identity: 125
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 30, 25

Conread position: 44-194
Cow position:
Alignm length: 152
Alignm identity: 112
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 81, 135

Conread position: 44-208
Cow position:
Alignm length: 171
Alignm identity: 139
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 99, 147

Conread position: 44-208
Cow position:
Alignm length: 167
Alignm identity: 131
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 13, 82

Conread position: 44-225
Cow position:
Alignm length: 182
Alignm identity: 137
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 95, 0

Conread position: 44-225
Cow position:
Alignm length: 184
Alignm identity: 137
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 82, 144

Conread position: 44-229
Cow position:
Alignm length: 189
Alignm identity: 140
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 82, 144

Conread position: 44-229
Cow position:
Alignm length: 192
Alignm identity: 145
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 79, 148

Conread position: 46-231
Cow position:
Alignm length: 188
Alignm identity: 131
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 80, 142

Conread position: 51-220
Cow position:
Alignm length: 173
Alignm identity: 131
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 48, 43

Conread position: 51-224
Cow position:
Alignm length: 177
Alignm identity: 125
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 63, 138

Conread position: 51-227
Cow position:
Alignm length: 180
Alignm identity: 133
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 62, 43

Conread position: 51-229
Cow position:
Alignm length: 182
Alignm identity: 133
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 62, 43

Conread position: 51-229
Cow position:
Alignm length: 182
Alignm identity: 129
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 170, 43

Conread position: 52-217
Cow position:
Alignm length: 170
Alignm identity: 123
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 64, 42

Conread position: 52-228
Cow position:
Alignm length: 179
Alignm identity: 139
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 160, 65

Conread position: 52-229
Cow position:
Alignm length: 181
Alignm identity: 133
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 47, 42

Conread position: 58-221
Cow position:
Alignm length: 167
Alignm identity: 120
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 42, 129

Conread position: 58-225
Cow position:
Alignm length: 172
Alignm identity: 124
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 59, 36

Conread position: 61-194
Cow position:
Alignm length: 134
Alignm identity: 107
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 55, 0

Conread position: 61-195
Cow position:
Alignm length: 137
Alignm identity: 109
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 65, 127

Conread position: 61-200
Cow position:
Alignm length: 142
Alignm identity: 109
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 21, 77

Conread position: 61-203
Cow position:
Alignm length: 143
Alignm identity: 109
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 77, 0

Conread position: 61-204
Cow position:
Alignm length: 151
Alignm identity: 115
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 61, 132

Conread position: 61-208
Cow position:
Alignm length: 151
Alignm identity: 114
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 45, 33

Conread position: 61-208
Cow position:
Alignm length: 148
Alignm identity: 111
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 41, 0

Conread position: 61-220
Cow position:
Alignm length: 160
Alignm identity: 125
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 65, 0

Conread position: 61-226
Cow position:
Alignm length: 168
Alignm identity: 120
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 38, 33

Conread position: 61-229
Cow position:
Alignm length: 173
Alignm identity: 135
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 54, 126

Conread position: 61-229
Cow position:
Alignm length: 171
Alignm identity: 129
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 144, 60

Conread position: 61-229
Cow position:
Alignm length: 169
Alignm identity: 127
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 29, 0

Conread position: 61-231
Cow position:
Alignm length: 172
Alignm identity: 122
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 60, 33

Conread position: 61-257
Cow position:
Alignm length: 200
Alignm identity: 141
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 50, 33

Conread position: 62-220
Cow position:
Alignm length: 160
Alignm identity: 121
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 37, 32

Conread position: 62-231
Cow position:
Alignm length: 174
Alignm identity: 132
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 143, 65

Conread position: 62-240
Cow position:
Alignm length: 182
Alignm identity: 127
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 63, 121

Conread position: 63-202
Cow position:
Alignm length: 146
Alignm identity: 111
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 54, 129

Conread position: 63-220
Cow position:
Alignm length: 158
Alignm identity: 115
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 68, 0

Conread position: 63-221
Cow position:
Alignm length: 167
Alignm identity: 128
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 62, 124

Conread position: 63-221
Cow position:
Alignm length: 161
Alignm identity: 122
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 63, 125

Conread position: 63-226
Cow position:
Alignm length: 174
Alignm identity: 130
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 61, 31

Conread position: 63-231
Cow position:
Alignm length: 174
Alignm identity: 128
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 68, 102

Conread position: 64-217
Cow position:
Alignm length: 154
Alignm identity: 117
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 65-208
Cow position:
Alignm length: 144
Alignm identity: 106
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 60, 0

Conread position: 65-208
Cow position:
Alignm length: 145
Alignm identity: 111
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 24, 58

Conread position: 70-202
Cow position:
Alignm length: 133
Alignm identity: 103
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 56, 0

Conread position: 70-208
Cow position:
Alignm length: 141
Alignm identity: 107
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 41, 24

Conread position: 70-229
Cow position:
Alignm length: 163
Alignm identity: 117
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 13, 119

Conread position: 72-203
Cow position:
Alignm length: 132
Alignm identity: 106
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 26, 0

Conread position: 73-203
Cow position:
Alignm length: 132
Alignm identity: 102
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 42, 53

Conread position: 74-228
Cow position:
Alignm length: 158
Alignm identity: 118
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 85, 46

Conread position: 75-231
Cow position:
Alignm length: 159
Alignm identity: 124
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 59, 113

Conread position: 83-226
Cow position:
Alignm length: 151
Alignm identity: 115
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 43, 107

Conread position: 89-225
Cow position:
Alignm length: 139
Alignm identity: 105
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 35, 97

Conread position: 89-228
Cow position:
Alignm length: 140
Alignm identity: 114
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 45, 0

Conread position: 102-240
Cow position:
Alignm length: 144
Alignm identity: 112
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 32, 50

Conread position: 116-227
Cow position:
Alignm length: 112
Alignm identity: 91
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 74, 0

Show alignments to all cow chromosomes.