Non-Coding RNA Search

Cow genome map


           Conread name:
           rcje38_p18.y1
        

               Conread position:
               1-111
               

               Cow position:
               chr5:15598215-15598108 (view UCSC Genome Browser custom track)
               

               Alignm length:
               111
               

               Alignm identity:
               90
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               70, 0
               

               Conread position:
               1-120
               

               Cow position:
               chr5:56517124-56517243 (view UCSC Genome Browser custom track)
               

               Alignm length:
               121
               

               Alignm identity:
               95
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               27, 47
               

               Conread position:
               1-126
               

               Cow position:
               chr5:6045314-6045441 (view UCSC Genome Browser custom track)
               

               Alignm length:
               128
               

               Alignm identity:
               98
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               32, 0
               

               Conread position:
               1-131
               

               Cow position:
               chr5:54375482-54375352 (view UCSC Genome Browser custom track)
               

               Alignm length:
               131
               

               Alignm identity:
               104
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1-134
               

               Cow position:
               chr5:41545873-41545740 (view UCSC Genome Browser custom track)
               

               Alignm length:
               137
               

               Alignm identity:
               105
               

               Alignm E-value:
               1e-20
               

               Alignm gaps (pig, cow):
               56, 37
               

               Conread position:
               1-134
               

               Cow position:
               chr5:55849905-55850033 (view UCSC Genome Browser custom track)
               

               Alignm length:
               134
               

               Alignm identity:
               108
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               41, 0
               

               Conread position:
               1-135
               

               Cow position:
               chr5:62378803-62378934 (view UCSC Genome Browser custom track)
               

               Alignm length:
               135
               

               Alignm identity:
               109
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               47, 0
               

               Conread position:
               1-136
               

               Cow position:
               chr5:9170561-9170429 (view UCSC Genome Browser custom track)
               

               Alignm length:
               136
               

               Alignm identity:
               111
               

               Alignm E-value:
               8e-29
               

               Alignm gaps (pig, cow):
               55, 0
               

               Conread position:
               1-139
               

               Cow position:
               chr5:43929715-43929578 (view UCSC Genome Browser custom track)
               

               Alignm length:
               139
               

               Alignm identity:
               111
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               23, 0
               

               Conread position:
               1-139
               

               Cow position:
               chr5:67118440-67118578 (view UCSC Genome Browser custom track)
               

               Alignm length:
               139
               

               Alignm identity:
               109
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1-141
               

               Cow position:
               chr5:7698020-7698160 (view UCSC Genome Browser custom track)
               

               Alignm length:
               142
               

               Alignm identity:
               105
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               76, 66
               

               Conread position:
               1-141
               

               Cow position:
               chr5:30949895-30949755 (view UCSC Genome Browser custom track)
               

               Alignm length:
               141
               

               Alignm identity:
               107
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1-141
               

               Cow position:
               chr5:35647363-35647503 (view UCSC Genome Browser custom track)
               

               Alignm length:
               141
               

               Alignm identity:
               113
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1-141
               

               Cow position:
               chr5:43992344-43992484 (view UCSC Genome Browser custom track)
               

               Alignm length:
               141
               

               Alignm identity:
               104
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1-141
               

               Cow position:
               chr5:56339001-56338861 (view UCSC Genome Browser custom track)
               

               Alignm length:
               141
               

               Alignm identity:
               113
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1-141
               

               Cow position:
               chr5:61875562-61875697 (view UCSC Genome Browser custom track)
               

               Alignm length:
               141
               

               Alignm identity:
               107
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               15, 0
               

               Conread position:
               1-148
               

               Cow position:
               chr5:8820992-8820845 (view UCSC Genome Browser custom track)
               

               Alignm length:
               149
               

               Alignm identity:
               108
               

               Alignm E-value:
               1e-20
               

               Alignm gaps (pig, cow):
               133, 44
               

               Conread position:
               1-165
               

               Cow position:
               chr5:60183823-60183984 (view UCSC Genome Browser custom track)
               

               Alignm length:
               167
               

               Alignm identity:
               129
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               31, 122
               

               Conread position:
               1-166
               

               Cow position:
               chr5:52083367-52083528 (view UCSC Genome Browser custom track)
               

               Alignm length:
               166
               

               Alignm identity:
               118
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               23, 0
               

               Conread position:
               1-168
               

               Cow position:
               chr5:17605114-17604949 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               133
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               97, 130
               

               Conread position:
               1-173
               

               Cow position:
               chr5:55232791-55232627 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               131
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               67, 43
               

               Conread position:
               1-178
               

               Cow position:
               chr5:55795947-55795773 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               130
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               50, 123
               

               Conread position:
               1-187
               

               Cow position:
               chr5:35826622-35826804 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               140
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               168, 109
               

               Conread position:
               1-187
               

               Cow position:
               chr5:49501804-49501612 (view UCSC Genome Browser custom track)
               

               Alignm length:
               193
               

               Alignm identity:
               137
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               126, 0
               

               Conread position:
               1-187
               

               Cow position:
               chr5:65752880-65753066 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               143
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               152, 103
               

               Conread position:
               1-194
               

               Cow position:
               chr5:29353105-29352920 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               137
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               94, 0
               

               Conread position:
               1-197
               

               Cow position:
               chr5:55942359-55942162 (view UCSC Genome Browser custom track)
               

               Alignm length:
               199
               

               Alignm identity:
               157
               

               Alignm E-value:
               3.9937e-43
               

               Alignm gaps (pig, cow):
               124, 187
               

               Conread position:
               1-201
               

               Cow position:
               chr5:66551877-66551673 (view UCSC Genome Browser custom track)
               

               Alignm length:
               206
               

               Alignm identity:
               158
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               42, 190
               

               Conread position:
               1-202
               

               Cow position:
               chr5:60948153-60948352 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               151
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               50, 0
               

               Conread position:
               1-202
               

               Cow position:
               chr5:66466339-66466533 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               148
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               9, 0
               

               Conread position:
               1-203
               

               Cow position:
               chr5:4267690-4267881 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               150
               

               Alignm E-value:
               8e-29
               

               Alignm gaps (pig, cow):
               116, 0
               

               Conread position:
               1-203
               

               Cow position:
               chr5:29460230-29460422 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               157
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               107, 23
               

               Conread position:
               1-203
               

               Cow position:
               chr5:29828066-29828269 (view UCSC Genome Browser custom track)
               

               Alignm length:
               206
               

               Alignm identity:
               148
               

               Alignm E-value:
               8e-29
               

               Alignm gaps (pig, cow):
               21, 91
               

               Conread position:
               1-203
               

               Cow position:
               chr5:41165108-41165303 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               154
               

               Alignm E-value:
               5e-36
               

               Alignm gaps (pig, cow):
               116, 0
               

               Conread position:
               1-203
               

               Cow position:
               chr5:62172432-62172619 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               151
               

               Alignm E-value:
               7e-28
               

               Alignm gaps (pig, cow):
               107, 0
               

               Conread position:
               1-203
               

               Cow position:
               chr5:69383275-69383472 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               166
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               105, 0
               

               Conread position:
               1-203
               

               Cow position:
               chr5:72045654-72045456 (view UCSC Genome Browser custom track)
               

               Alignm length:
               205
               

               Alignm identity:
               149
               

               Alignm E-value:
               8e-30
               

               Alignm gaps (pig, cow):
               122, 40
               

               Conread position:
               1-203
               

               Cow position:
               chr5:75228179-75227992 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               152
               

               Alignm E-value:
               8e-30
               

               Alignm gaps (pig, cow):
               115, 0
               

               Conread position:
               1-206
               

               Cow position:
               chr5:12761098-12760896 (view UCSC Genome Browser custom track)
               

               Alignm length:
               207
               

               Alignm identity:
               141
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               120, 89
               

               Conread position:
               1-206
               

               Cow position:
               chr5:14920910-14920702 (view UCSC Genome Browser custom track)
               

               Alignm length:
               210
               

               Alignm identity:
               157
               

               Alignm E-value:
               5e-36
               

               Alignm gaps (pig, cow):
               114, 189
               

               Conread position:
               1-206
               

               Cow position:
               chr5:61455868-61456071 (view UCSC Genome Browser custom track)
               

               Alignm length:
               209
               

               Alignm identity:
               151
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               183, 41
               

               Conread position:
               1-207
               

               Cow position:
               chr5:30232928-30233135 (view UCSC Genome Browser custom track)
               

               Alignm length:
               210
               

               Alignm identity:
               160
               

               Alignm E-value:
               7e-39
               

               Alignm gaps (pig, cow):
               109, 85
               

               Conread position:
               1-207
               

               Cow position:
               chr5:66366530-66366738 (view UCSC Genome Browser custom track)
               

               Alignm length:
               210
               

               Alignm identity:
               150
               

               Alignm E-value:
               9e-31
               

               Alignm gaps (pig, cow):
               186, 50
               

               Conread position:
               1-208
               

               Cow position:
               chr5:5257268-5257061 (view UCSC Genome Browser custom track)
               

               Alignm length:
               210
               

               Alignm identity:
               144
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               129, 137
               

               Conread position:
               1-208
               

               Cow position:
               chr5:5855878-5856086 (view UCSC Genome Browser custom track)
               

               Alignm length:
               210
               

               Alignm identity:
               144
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               122, 187
               

               Conread position:
               1-208
               

               Cow position:
               chr5:12557269-12557061 (view UCSC Genome Browser custom track)
               

               Alignm length:
               211
               

               Alignm identity:
               162
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               41, 32
               

               Conread position:
               1-208
               

               Cow position:
               chr5:25035234-25035028 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               164
               

               Alignm E-value:
               8e-40
               

               Alignm gaps (pig, cow):
               129, 12
               

               Conread position:
               1-208
               

               Cow position:
               chr5:33834063-33834266 (view UCSC Genome Browser custom track)
               

               Alignm length:
               209
               

               Alignm identity:
               147
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               106, 8
               

               Conread position:
               1-208
               

               Cow position:
               chr5:34624979-34625174 (view UCSC Genome Browser custom track)
               

               Alignm length:
               209
               

               Alignm identity:
               159
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               42, 107
               

               Conread position:
               1-208
               

               Cow position:
               chr5:43858399-43858192 (view UCSC Genome Browser custom track)
               

               Alignm length:
               210
               

               Alignm identity:
               148
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               122, 52
               

               Conread position:
               1-208
               

               Cow position:
               chr5:50723066-50723274 (view UCSC Genome Browser custom track)
               

               Alignm length:
               211
               

               Alignm identity:
               147
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               105, 93
               

               Conread position:
               1-208
               

               Cow position:
               chr5:54312621-54312825 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               162
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               185, 0
               

               Conread position:
               1-208
               

               Cow position:
               chr5:61725987-61726183 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               156
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               27, 0
               

               Conread position:
               1-208
               

               Cow position:
               chr5:64139580-64139789 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               157
               

               Alignm E-value:
               9e-31
               

               Alignm gaps (pig, cow):
               111, 147
               

               Conread position:
               1-208
               

               Cow position:
               chr5:70951860-70951666 (view UCSC Genome Browser custom track)
               

               Alignm length:
               210
               

               Alignm identity:
               162
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               174, 41
               

               Conread position:
               1-209
               

               Cow position:
               chr5:39937136-39937343 (view UCSC Genome Browser custom track)
               

               Alignm length:
               211
               

               Alignm identity:
               153
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               125, 23
               

               Conread position:
               1-209
               

               Cow position:
               chr5:45187097-45186888 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               160
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               120, 83
               

               Conread position:
               1-210
               

               Cow position:
               chr5:21828888-21829092 (view UCSC Genome Browser custom track)
               

               Alignm length:
               210
               

               Alignm identity:
               167
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               65, 0
               

               Conread position:
               1-210
               

               Cow position:
               chr5:40241766-40241962 (view UCSC Genome Browser custom track)
               

               Alignm length:
               210
               

               Alignm identity:
               157
               

               Alignm E-value:
               9e-31
               

               Alignm gaps (pig, cow):
               37, 0
               

               Conread position:
               1-217
               

               Cow position:
               chr5:7044685-7044471 (view UCSC Genome Browser custom track)
               

               Alignm length:
               217
               

               Alignm identity:
               161
               

               Alignm E-value:
               7e-39
               

               Alignm gaps (pig, cow):
               131, 0
               

               Conread position:
               1-217
               

               Cow position:
               chr5:30253761-30253975 (view UCSC Genome Browser custom track)
               

               Alignm length:
               217
               

               Alignm identity:
               172
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               144, 0
               

               Conread position:
               1-217
               

               Cow position:
               chr5:74643655-74643450 (view UCSC Genome Browser custom track)
               

               Alignm length:
               217
               

               Alignm identity:
               163
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               13, 0
               

               Conread position:
               1-219
               

               Cow position:
               chr5:14904049-14903828 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               154
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               34, 167
               

               Conread position:
               1-219
               

               Cow position:
               chr5:39447515-39447288 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               169
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               90, 195
               

               Conread position:
               1-219
               

               Cow position:
               chr5:43402925-43403146 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               177
               

               Alignm E-value:
               5.60519e-45
               

               Alignm gaps (pig, cow):
               116, 100
               

               Conread position:
               1-220
               

               Cow position:
               chr5:20128072-20128297 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               159
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               104, 93
               

               Conread position:
               1-220
               

               Cow position:
               chr5:30845133-30845342 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               167
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               43, 0
               

               Conread position:
               1-220
               

               Cow position:
               chr5:35763291-35763482 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               160
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               27, 0
               

               Conread position:
               1-220
               

               Cow position:
               chr5:59627120-59627329 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               152
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               151, 0
               

               Conread position:
               1-220
               

               Cow position:
               chr5:65552691-65552483 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               153
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               105, 71
               

               Conread position:
               1-221
               

               Cow position:
               chr5:3743342-3743561 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               156
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               118, 187
               

               Conread position:
               1-221
               

               Cow position:
               chr5:12434563-12434772 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               168
               

               Alignm E-value:
               7e-38
               

               Alignm gaps (pig, cow):
               123, 0
               

               Conread position:
               1-221
               

               Cow position:
               chr5:24136735-24136973 (view UCSC Genome Browser custom track)
               

               Alignm length:
               240
               

               Alignm identity:
               171
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               73, 204
               

               Conread position:
               1-221
               

               Cow position:
               chr5:34915033-34914813 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               163
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               174, 129
               

               Conread position:
               1-221
               

               Cow position:
               chr5:49342029-49341794 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               178
               

               Alignm E-value:
               6e-37
               

               Alignm gaps (pig, cow):
               130, 199
               

               Conread position:
               1-221
               

               Cow position:
               chr5:49474525-49474317 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               162
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               105, 0
               

               Conread position:
               1-221
               

               Cow position:
               chr5:63192720-63192515 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               163
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               43, 0
               

               Conread position:
               1-221
               

               Cow position:
               chr5:64026999-64026770 (view UCSC Genome Browser custom track)
               

               Alignm length:
               230
               

               Alignm identity:
               180
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               118, 0
               

               Conread position:
               1-222
               

               Cow position:
               chr5:11668165-11667943 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               164
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               140, 186
               

               Conread position:
               1-224
               

               Cow position:
               chr5:15470954-15471160 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               156
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               8, 0
               

               Conread position:
               1-224
               

               Cow position:
               chr5:30247502-30247284 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               161
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               125, 89
               

               Conread position:
               1-224
               

               Cow position:
               chr5:60515008-60514786 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               167
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               109, 71
               

               Conread position:
               1-225
               

               Cow position:
               chr5:11229652-11229428 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               171
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               79, 25
               

               Conread position:
               1-225
               

               Cow position:
               chr5:18574195-18574425 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               170
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               102, 55
               

               Conread position:
               1-225
               

               Cow position:
               chr5:22242752-22242532 (view UCSC Genome Browser custom track)
               

               Alignm length:
               233
               

               Alignm identity:
               171
               

               Alignm E-value:
               8e-29
               

               Alignm gaps (pig, cow):
               29, 54
               

               Conread position:
               1-225
               

               Cow position:
               chr5:36038981-36038763 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               179
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               64, 41
               

               Conread position:
               1-225
               

               Cow position:
               chr5:63627506-63627300 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               157
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               42, 0
               

               Conread position:
               1-226
               

               Cow position:
               chr5:59626951-59626725 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               182
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               203, 94
               

               Conread position:
               1-227
               

               Cow position:
               chr5:35247092-35246859 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               169
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               25, 0
               

               Conread position:
               1-228
               

               Cow position:
               chr5:19079272-19079485 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               165
               

               Alignm E-value:
               8e-29
               

               Alignm gaps (pig, cow):
               81, 0
               

               Conread position:
               1-228
               

               Cow position:
               chr5:30276710-30276931 (view UCSC Genome Browser custom track)
               

               Alignm length:
               230
               

               Alignm identity:
               182
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               100, 106
               

               Conread position:
               1-228
               

               Cow position:
               chr5:40097616-40097845 (view UCSC Genome Browser custom track)
               

               Alignm length:
               232
               

               Alignm identity:
               153
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               126, 95
               

               Conread position:
               1-228
               

               Cow position:
               chr5:44446845-44446629 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               176
               

               Alignm E-value:
               3.9937e-43
               

               Alignm gaps (pig, cow):
               132, 0
               

               Conread position:
               1-228
               

               Cow position:
               chr5:52137033-52136804 (view UCSC Genome Browser custom track)
               

               Alignm length:
               233
               

               Alignm identity:
               161
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               112, 8
               

               Conread position:
               1-228
               

               Cow position:
               chr5:56613544-56613314 (view UCSC Genome Browser custom track)
               

               Alignm length:
               232
               

               Alignm identity:
               156
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               111, 186
               

               Conread position:
               1-229
               

               Cow position:
               chr5:14550564-14550335 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               159
               

               Alignm E-value:
               8e-30
               

               Alignm gaps (pig, cow):
               125, 190
               

               Conread position:
               1-229
               

               Cow position:
               chr5:15722054-15721835 (view UCSC Genome Browser custom track)
               

               Alignm length:
               233
               

               Alignm identity:
               166
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               176, 115
               

               Conread position:
               1-229
               

               Cow position:
               chr5:50943137-50942909 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               175
               

               Alignm E-value:
               6e-37
               

               Alignm gaps (pig, cow):
               100, 122
               

               Conread position:
               1-229
               

               Cow position:
               chr5:54750828-54751057 (view UCSC Genome Browser custom track)
               

               Alignm length:
               232
               

               Alignm identity:
               162
               

               Alignm E-value:
               8e-30
               

               Alignm gaps (pig, cow):
               132, 9
               

               Conread position:
               1-229
               

               Cow position:
               chr5:57074311-57074090 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               181
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               124, 0
               

               Conread position:
               1-231
               

               Cow position:
               chr5:11427213-11426985 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               157
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               132, 84
               

               Conread position:
               1-231
               

               Cow position:
               chr5:56028519-56028301 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               178
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               27, 0
               

               Conread position:
               1-231
               

               Cow position:
               chr5:57062509-57062279 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               162
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               102, 114
               

               Conread position:
               1-231
               

               Cow position:
               chr5:69337840-69338061 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               181
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               123, 0
               

               Conread position:
               1-232
               

               Cow position:
               chr5:12299931-12300161 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               159
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               132, 156
               

               Conread position:
               1-232
               

               Cow position:
               chr5:52852991-52853219 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               166
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               104, 94
               

               Conread position:
               1-233
               

               Cow position:
               chr5:47743648-47743871 (view UCSC Genome Browser custom track)
               

               Alignm length:
               233
               

               Alignm identity:
               156
               

               Alignm E-value:
               1e-20
               

               Alignm gaps (pig, cow):
               71, 0
               

               Conread position:
               1-233
               

               Cow position:
               chr5:69461353-69461592 (view UCSC Genome Browser custom track)
               

               Alignm length:
               242
               

               Alignm identity:
               184
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               54, 77
               

               Conread position:
               1-236
               

               Cow position:
               chr5:4280466-4280700 (view UCSC Genome Browser custom track)
               

               Alignm length:
               240
               

               Alignm identity:
               169
               

               Alignm E-value:
               9e-31
               

               Alignm gaps (pig, cow):
               20, 125
               

               Conread position:
               1-237
               

               Cow position:
               chr5:53055541-53055300 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               164
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               123, 187
               

               Conread position:
               1-239
               

               Cow position:
               chr5:991484-991730 (view UCSC Genome Browser custom track)
               

               Alignm length:
               249
               

               Alignm identity:
               180
               

               Alignm E-value:
               5e-36
               

               Alignm gaps (pig, cow):
               66, 195
               

               Conread position:
               1-239
               

               Cow position:
               chr5:50101356-50101124 (view UCSC Genome Browser custom track)
               

               Alignm length:
               241
               

               Alignm identity:
               170
               

               Alignm E-value:
               9e-31
               

               Alignm gaps (pig, cow):
               51, 135
               

               Conread position:
               1-246
               

               Cow position:
               chr5:44796713-44796475 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               177
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               136, 0
               

               Conread position:
               1-272
               

               Cow position:
               chr5:33560714-33560454 (view UCSC Genome Browser custom track)
               

               Alignm length:
               272
               

               Alignm identity:
               185
               

               Alignm E-value:
               8e-29
               

               Alignm gaps (pig, cow):
               137, 0
               

               Conread position:
               2-208
               

               Cow position:
               chr5:57497406-57497200 (view UCSC Genome Browser custom track)
               

               Alignm length:
               210
               

               Alignm identity:
               161
               

               Alignm E-value:
               8e-40
               

               Alignm gaps (pig, cow):
               16, 125
               

               Conread position:
               2-219
               

               Cow position:
               chr5:57526903-57526688 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               153
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               125, 66
               

               Conread position:
               2-220
               

               Cow position:
               chr5:59335790-59336009 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               157
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               16, 12
               

               Conread position:
               2-221
               

               Cow position:
               chr5:26147612-26147827 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               174
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               120, 0
               

               Conread position:
               2-221
               

               Cow position:
               chr5:46710606-46710822 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               155
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               124, 23
               

               Conread position:
               2-221
               

               Cow position:
               chr5:46715506-46715722 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               154
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               124, 23
               

               Conread position:
               2-229
               

               Cow position:
               chr5:44848003-44847777 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               162
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               24, 117
               

               Conread position:
               3-202
               

               Cow position:
               chr5:75760252-75760048 (view UCSC Genome Browser custom track)
               

               Alignm length:
               207
               

               Alignm identity:
               151
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               126, 41
               

               Conread position:
               3-203
               

               Cow position:
               chr5:44722490-44722292 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               143
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               69, 0
               

               Conread position:
               3-204
               

               Cow position:
               chr5:20779373-20779177 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               149
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               21, 0
               

               Conread position:
               3-223
               

               Cow position:
               chr5:44810217-44809997 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               165
               

               Alignm E-value:
               5e-36
               

               Alignm gaps (pig, cow):
               96, 91
               

               Conread position:
               3-228
               

               Cow position:
               chr5:16893749-16893536 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               171
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               103, 0
               

               Conread position:
               4-134
               

               Cow position:
               chr5:69636247-69636377 (view UCSC Genome Browser custom track)
               

               Alignm length:
               131
               

               Alignm identity:
               103
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               4-138
               

               Cow position:
               chr5:4710128-4709995 (view UCSC Genome Browser custom track)
               

               Alignm length:
               135
               

               Alignm identity:
               103
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               38, 0
               

               Conread position:
               4-139
               

               Cow position:
               chr5:29912441-29912579 (view UCSC Genome Browser custom track)
               

               Alignm length:
               140
               

               Alignm identity:
               108
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               45, 89
               

               Conread position:
               4-140
               

               Cow position:
               chr5:50821806-50821946 (view UCSC Genome Browser custom track)
               

               Alignm length:
               141
               

               Alignm identity:
               106
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               112, 0
               

               Conread position:
               4-141
               

               Cow position:
               chr5:40242069-40242204 (view UCSC Genome Browser custom track)
               

               Alignm length:
               139
               

               Alignm identity:
               105
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               113, 67
               

               Conread position:
               4-157
               

               Cow position:
               chr5:5847822-5847662 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               123
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               121, 15
               

               Conread position:
               4-175
               

               Cow position:
               chr5:56334485-56334326 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               129
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               64, 40
               

               Conread position:
               4-187
               

               Cow position:
               chr5:44054030-44053840 (view UCSC Genome Browser custom track)
               

               Alignm length:
               193
               

               Alignm identity:
               137
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               112, 60
               

               Conread position:
               4-187
               

               Cow position:
               chr5:44196906-44196724 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               125
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               121, 0
               

               Conread position:
               4-188
               

               Cow position:
               chr5:46704276-46704093 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               138
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               118, 0
               

               Conread position:
               4-196
               

               Cow position:
               chr5:68718893-68719081 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               145
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               125, 45
               

               Conread position:
               4-202
               

               Cow position:
               chr5:3492203-3492405 (view UCSC Genome Browser custom track)
               

               Alignm length:
               205
               

               Alignm identity:
               141
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               77, 180
               

               Conread position:
               4-203
               

               Cow position:
               chr5:18062296-18062089 (view UCSC Genome Browser custom track)
               

               Alignm length:
               209
               

               Alignm identity:
               146
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               122, 191
               

               Conread position:
               4-204
               

               Cow position:
               chr5:12673450-12673259 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               149
               

               Alignm E-value:
               8e-30
               

               Alignm gaps (pig, cow):
               16, 0
               

               Conread position:
               4-208
               

               Cow position:
               chr5:26467649-26467853 (view UCSC Genome Browser custom track)
               

               Alignm length:
               207
               

               Alignm identity:
               154
               

               Alignm E-value:
               5e-35
               

               Alignm gaps (pig, cow):
               54, 178
               

               Conread position:
               4-208
               

               Cow position:
               chr5:35459271-35459070 (view UCSC Genome Browser custom track)
               

               Alignm length:
               206
               

               Alignm identity:
               144
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               59, 131
               

               Conread position:
               4-208
               

               Cow position:
               chr5:57935085-57934894 (view UCSC Genome Browser custom track)
               

               Alignm length:
               205
               

               Alignm identity:
               152
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               115, 0
               

               Conread position:
               4-210
               

               Cow position:
               chr5:55068729-55068929 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               151
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               203, 162
               

               Conread position:
               4-211
               

               Cow position:
               chr5:29903500-29903314 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               154
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               112, 0
               

               Conread position:
               4-215
               

               Cow position:
               chr5:52165154-52164941 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               159
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               139, 58
               

               Conread position:
               4-217
               

               Cow position:
               chr5:51247108-51246902 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               162
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               68, 134
               

               Conread position:
               4-218
               

               Cow position:
               chr5:56860470-56860679 (view UCSC Genome Browser custom track)
               

               Alignm length:
               217
               

               Alignm identity:
               161
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               138, 52
               

               Conread position:
               4-220
               

               Cow position:
               chr5:28302722-28302521 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               160
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               20, 122
               

               Conread position:
               4-224
               

               Cow position:
               chr5:37842256-37842037 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               169
               

               Alignm E-value:
               3.9937e-43
               

               Alignm gaps (pig, cow):
               111, 132
               

               Conread position:
               4-224
               

               Cow position:
               chr5:57101499-57101286 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               155
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               33, 0
               

               Conread position:
               4-228
               

               Cow position:
               chr5:66581984-66582214 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               165
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               58, 102
               

               Conread position:
               4-228
               

               Cow position:
               chr5:68537642-68537420 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               156
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               117, 40
               

               Conread position:
               4-229
               

               Cow position:
               chr5:2240966-2240743 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               186
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               122, 25
               

               Conread position:
               4-229
               

               Cow position:
               chr5:7177174-7177399 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               154
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               129, 183
               

               Conread position:
               4-229
               

               Cow position:
               chr5:35190133-35190351 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               185
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               125, 0
               

               Conread position:
               4-229
               

               Cow position:
               chr5:51289568-51289357 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               174
               

               Alignm E-value:
               7e-39
               

               Alignm gaps (pig, cow):
               40, 0
               

               Conread position:
               4-229
               

               Cow position:
               chr5:60596108-60595866 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               181
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               54, 45
               

               Conread position:
               4-229
               

               Cow position:
               chr5:67634494-67634262 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               164
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               94, 191
               

               Conread position:
               4-230
               

               Cow position:
               chr5:64592072-64591844 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               163
               

               Alignm E-value:
               9e-31
               

               Alignm gaps (pig, cow):
               171, 153
               

               Conread position:
               4-233
               

               Cow position:
               chr5:15363905-15364122 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               167
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               200, 125
               

               Conread position:
               4-236
               

               Cow position:
               chr5:52001600-52001368 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               165
               

               Alignm E-value:
               8e-30
               

               Alignm gaps (pig, cow):
               122, 182
               

               Conread position:
               4-245
               

               Cow position:
               chr5:33273718-33273958 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               178
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               27, 46
               

               Conread position:
               5-118
               

               Cow position:
               chr5:37814650-37814763 (view UCSC Genome Browser custom track)
               

               Alignm length:
               114
               

               Alignm identity:
               89
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               5-128
               

               Cow position:
               chr5:35982714-35982588 (view UCSC Genome Browser custom track)
               

               Alignm length:
               127
               

               Alignm identity:
               104
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               53, 0
               

               Conread position:
               5-137
               

               Cow position:
               chr5:9233965-9233832 (view UCSC Genome Browser custom track)
               

               Alignm length:
               134
               

               Alignm identity:
               104
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               95, 0
               

               Conread position:
               5-141
               

               Cow position:
               chr5:4166666-4166800 (view UCSC Genome Browser custom track)
               

               Alignm length:
               137
               

               Alignm identity:
               106
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               42, 0
               

               Conread position:
               5-141
               

               Cow position:
               chr5:44726310-44726177 (view UCSC Genome Browser custom track)
               

               Alignm length:
               137
               

               Alignm identity:
               106
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               116, 0
               

               Conread position:
               5-141
               

               Cow position:
               chr5:46509841-46509704 (view UCSC Genome Browser custom track)
               

               Alignm length:
               138
               

               Alignm identity:
               104
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               107, 0
               

               Conread position:
               5-148
               

               Cow position:
               chr5:23168802-23168659 (view UCSC Genome Browser custom track)
               

               Alignm length:
               144
               

               Alignm identity:
               111
               

               Alignm E-value:
               7e-28
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               5-181
               

               Cow position:
               chr5:38168918-38169093 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               142
               

               Alignm E-value:
               7e-39
               

               Alignm gaps (pig, cow):
               88, 120
               

               Conread position:
               5-182
               

               Cow position:
               chr5:57686713-57686540 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               136
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               124, 0
               

               Conread position:
               5-194
               

               Cow position:
               chr5:38040540-38040356 (view UCSC Genome Browser custom track)
               

               Alignm length:
               190
               

               Alignm identity:
               137
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               129, 0
               

               Conread position:
               5-194
               

               Cow position:
               chr5:72006466-72006285 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               145
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               110, 139
               

               Conread position:
               5-196
               

               Cow position:
               chr5:45397597-45397779 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               155
               

               Alignm E-value:
               8e-40
               

               Alignm gaps (pig, cow):
               39, 0
               

               Conread position:
               5-199
               

               Cow position:
               chr5:74580813-74581003 (view UCSC Genome Browser custom track)
               

               Alignm length:
               195
               

               Alignm identity:
               134
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               119, 0
               

               Conread position:
               5-201
               

               Cow position:
               chr5:50600071-50600265 (view UCSC Genome Browser custom track)
               

               Alignm length:
               198
               

               Alignm identity:
               155
               

               Alignm E-value:
               8.99998e-41
               

               Alignm gaps (pig, cow):
               53, 120
               

               Conread position:
               5-202
               

               Cow position:
               chr5:66339103-66339293 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               152
               

               Alignm E-value:
               8e-29
               

               Alignm gaps (pig, cow):
               164, 43
               

               Conread position:
               5-203
               

               Cow position:
               chr5:12654887-12654688 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               151
               

               Alignm E-value:
               8e-30
               

               Alignm gaps (pig, cow):
               46, 122
               

               Conread position:
               5-203
               

               Cow position:
               chr5:66257663-66257855 (view UCSC Genome Browser custom track)
               

               Alignm length:
               199
               

               Alignm identity:
               144
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               43, 0
               

               Conread position:
               5-203
               

               Cow position:
               chr5:71788717-71788914 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               141
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               79, 99
               

               Conread position:
               5-206
               

               Cow position:
               chr5:53835741-53835945 (view UCSC Genome Browser custom track)
               

               Alignm length:
               207
               

               Alignm identity:
               158
               

               Alignm E-value:
               6e-37
               

               Alignm gaps (pig, cow):
               113, 67
               

               Conread position:
               5-207
               

               Cow position:
               chr5:20288239-20288033 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               170
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               100, 186
               

               Conread position:
               5-207
               

               Cow position:
               chr5:60016192-60016389 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               152
               

               Alignm E-value:
               5e-35
               

               Alignm gaps (pig, cow):
               39, 0
               

               Conread position:
               5-208
               

               Cow position:
               chr5:3582584-3582781 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               156
               

               Alignm E-value:
               7e-38
               

               Alignm gaps (pig, cow):
               111, 0
               

               Conread position:
               5-208
               

               Cow position:
               chr5:9894099-9893899 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               161
               

               Alignm E-value:
               4.06377e-44
               

               Alignm gaps (pig, cow):
               111, 0
               

               Conread position:
               5-208
               

               Cow position:
               chr5:19752331-19752527 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               153
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               28, 0
               

               Conread position:
               5-208
               

               Cow position:
               chr5:21617482-21617681 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               159
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               112, 0
               

               Conread position:
               5-208
               

               Cow position:
               chr5:22795241-22795432 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               159
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               39, 0
               

               Conread position:
               5-208
               

               Cow position:
               chr5:30302919-30303107 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               157
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               5-208
               

               Cow position:
               chr5:30629135-30628927 (view UCSC Genome Browser custom track)
               

               Alignm length:
               211
               

               Alignm identity:
               166
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               60, 100
               

               Conread position:
               5-208
               

               Cow position:
               chr5:35684962-35685159 (view UCSC Genome Browser custom track)
               

               Alignm length:
               207
               

               Alignm identity:
               157
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               107, 39
               

               Conread position:
               5-208
               

               Cow position:
               chr5:51298688-51298489 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               156
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               44, 0
               

               Conread position:
               5-208
               

               Cow position:
               chr5:65941226-65941024 (view UCSC Genome Browser custom track)
               

               Alignm length:
               205
               

               Alignm identity:
               164
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               163, 99
               

               Conread position:
               5-210
               

               Cow position:
               chr5:56070883-56071086 (view UCSC Genome Browser custom track)
               

               Alignm length:
               207
               

               Alignm identity:
               161
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               203, 117
               

               Conread position:
               5-217
               

               Cow position:
               chr5:45845667-45845455 (view UCSC Genome Browser custom track)
               

               Alignm length:
               217
               

               Alignm identity:
               175
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               81, 94
               

               Conread position:
               5-217
               

               Cow position:
               chr5:64176102-64175896 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               159
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               119, 0
               

               Conread position:
               5-219
               

               Cow position:
               chr5:44028279-44028073 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               167
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               57, 37
               

               Conread position:
               5-220
               

               Cow position:
               chr5:56222520-56222298 (view UCSC Genome Browser custom track)
               

               Alignm length:
               233
               

               Alignm identity:
               170
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               85, 62
               

               Conread position:
               5-221
               

               Cow position:
               chr5:24996198-24995981 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               176
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               110, 52
               

               Conread position:
               5-221
               

               Cow position:
               chr5:47601836-47602047 (view UCSC Genome Browser custom track)
               

               Alignm length:
               217
               

               Alignm identity:
               166
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               119, 0
               

               Conread position:
               5-228
               

               Cow position:
               chr5:46512744-46512520 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               173
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               120, 59
               

               Conread position:
               5-228
               

               Cow position:
               chr5:55966856-55966627 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               171
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               127, 96
               

               Conread position:
               5-229
               

               Cow position:
               chr5:26167445-26167665 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               170
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               120, 0
               

               Conread position:
               5-229
               

               Cow position:
               chr5:38833147-38833361 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               175
               

               Alignm E-value:
               8.99998e-41
               

               Alignm gaps (pig, cow):
               220, 24
               

               Conread position:
               5-229
               

               Cow position:
               chr5:55965870-55965640 (view UCSC Genome Browser custom track)
               

               Alignm length:
               233
               

               Alignm identity:
               161
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               94, 89
               

               Conread position:
               5-231
               

               Cow position:
               chr5:50824616-50824829 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               170
               

               Alignm E-value:
               5e-36
               

               Alignm gaps (pig, cow):
               117, 0
               

               Conread position:
               5-244
               

               Cow position:
               chr5:26549116-26548881 (view UCSC Genome Browser custom track)
               

               Alignm length:
               240
               

               Alignm identity:
               187
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               112, 0
               

               Conread position:
               6-139
               

               Cow position:
               chr5:51490577-51490444 (view UCSC Genome Browser custom track)
               

               Alignm length:
               134
               

               Alignm identity:
               101
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               6-197
               

               Cow position:
               chr5:17555007-17554820 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               159
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               40, 50
               

               Conread position:
               6-203
               

               Cow position:
               chr5:60523760-60523948 (view UCSC Genome Browser custom track)
               

               Alignm length:
               198
               

               Alignm identity:
               160
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               38, 0
               

               Conread position:
               6-208
               

               Cow position:
               chr5:35969558-35969766 (view UCSC Genome Browser custom track)
               

               Alignm length:
               211
               

               Alignm identity:
               153
               

               Alignm E-value:
               8e-30
               

               Alignm gaps (pig, cow):
               129, 18
               

               Conread position:
               6-208
               

               Cow position:
               chr5:42050577-42050770 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               157
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               104, 0
               

               Conread position:
               6-209
               

               Cow position:
               chr5:65967706-65967510 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               145
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               111, 0
               

               Conread position:
               6-220
               

               Cow position:
               chr5:14314553-14314752 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               159
               

               Alignm E-value:
               9e-31
               

               Alignm gaps (pig, cow):
               94, 0
               

               Conread position:
               6-222
               

               Cow position:
               chr5:39035805-39036022 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               168
               

               Alignm E-value:
               8e-40
               

               Alignm gaps (pig, cow):
               115, 85
               

               Conread position:
               7-159
               

               Cow position:
               chr5:694890-695042 (view UCSC Genome Browser custom track)
               

               Alignm length:
               157
               

               Alignm identity:
               117
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               92, 37
               

               Conread position:
               7-167
               

               Cow position:
               chr5:7193445-7193599 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               120
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               88, 0
               

               Conread position:
               7-195
               

               Cow position:
               chr5:12351781-12351599 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               143
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               82, 0
               

               Conread position:
               7-203
               

               Cow position:
               chr5:72895712-72895907 (view UCSC Genome Browser custom track)
               

               Alignm length:
               197
               

               Alignm identity:
               149
               

               Alignm E-value:
               7e-38
               

               Alignm gaps (pig, cow):
               177, 0
               

               Conread position:
               7-210
               

               Cow position:
               chr5:12322778-12322583 (view UCSC Genome Browser custom track)
               

               Alignm length:
               206
               

               Alignm identity:
               158
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               99, 34
               

               Conread position:
               7-214
               

               Cow position:
               chr5:19278681-19278472 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               154
               

               Alignm E-value:
               8e-29
               

               Alignm gaps (pig, cow):
               20, 95
               

               Conread position:
               7-221
               

               Cow position:
               chr5:73253437-73253641 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               158
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               37, 0
               

               Conread position:
               7-225
               

               Cow position:
               chr5:34288224-34288011 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               181
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               106, 37
               

               Conread position:
               7-232
               

               Cow position:
               chr5:56014757-56014973 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               176
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               219, 115
               

               Conread position:
               8-206
               

               Cow position:
               chr5:40109520-40109708 (view UCSC Genome Browser custom track)
               

               Alignm length:
               199
               

               Alignm identity:
               162
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               51, 0
               

               Conread position:
               8-208
               

               Cow position:
               chr5:70270894-70271093 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               148
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               120, 107
               

               Conread position:
               8-209
               

               Cow position:
               chr5:56548599-56548793 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               153
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               34, 0
               

               Conread position:
               8-230
               

               Cow position:
               chr5:49821455-49821680 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               165
               

               Alignm E-value:
               5e-36
               

               Alignm gaps (pig, cow):
               116, 181
               

               Conread position:
               8-239
               

               Cow position:
               chr5:38647667-38647913 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               184
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               117, 194
               

               Conread position:
               9-184
               

               Cow position:
               chr5:54330909-54331090 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               134
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               53, 10
               

               Conread position:
               9-196
               

               Cow position:
               chr5:54753224-54753035 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               135
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               43, 180
               

               Conread position:
               9-199
               

               Cow position:
               chr5:53946925-53947116 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               138
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               95, 85
               

               Conread position:
               9-203
               

               Cow position:
               chr5:44734697-44734506 (view UCSC Genome Browser custom track)
               

               Alignm length:
               195
               

               Alignm identity:
               146
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               115, 0
               

               Conread position:
               9-208
               

               Cow position:
               chr5:6086315-6086115 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               153
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               26, 177
               

               Conread position:
               9-208
               

               Cow position:
               chr5:35145355-35145561 (view UCSC Genome Browser custom track)
               

               Alignm length:
               209
               

               Alignm identity:
               145
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               36, 61
               

               Conread position:
               9-208
               

               Cow position:
               chr5:64140565-64140764 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               137
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               28, 172
               

               Conread position:
               9-208
               

               Cow position:
               chr5:66972457-66972656 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               145
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               118, 155
               

               Conread position:
               9-214
               

               Cow position:
               chr5:3677751-3677961 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               153
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               106, 33
               

               Conread position:
               9-220
               

               Cow position:
               chr5:7057373-7057158 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               156
               

               Alignm E-value:
               8e-29
               

               Alignm gaps (pig, cow):
               111, 48
               

               Conread position:
               9-220
               

               Cow position:
               chr5:16668725-16668926 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               163
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               114, 0
               

               Conread position:
               9-220
               

               Cow position:
               chr5:17104881-17105080 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               168
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               35, 0
               

               Conread position:
               9-226
               

               Cow position:
               chr5:29148919-29149148 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               171
               

               Alignm E-value:
               8e-29
               

               Alignm gaps (pig, cow):
               134, 35
               

               Conread position:
               9-229
               

               Cow position:
               chr5:17828451-17828233 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               153
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               111, 179
               

               Conread position:
               9-229
               

               Cow position:
               chr5:57399224-57399006 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               159
               

               Alignm E-value:
               8e-29
               

               Alignm gaps (pig, cow):
               97, 29
               

               Conread position:
               9-234
               

               Cow position:
               chr5:13270989-13270768 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               156
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               105, 33
               

               Conread position:
               10-171
               

               Cow position:
               chr5:17602175-17602015 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               131
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               23, 0
               

               Conread position:
               10-209
               

               Cow position:
               chr5:25495329-25495124 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               166
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               114, 178
               

               Conread position:
               10-210
               

               Cow position:
               chr5:1694059-1693864 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               156
               

               Alignm E-value:
               8e-40
               

               Alignm gaps (pig, cow):
               116, 0
               

               Conread position:
               10-222
               

               Cow position:
               chr5:22667100-22667311 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               168
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               206, 112
               

               Conread position:
               11-196
               

               Cow position:
               chr5:53980724-53980538 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               136
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               115, 177
               

               Conread position:
               11-208
               

               Cow position:
               chr5:46541025-46540834 (view UCSC Genome Browser custom track)
               

               Alignm length:
               200
               

               Alignm identity:
               150
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               24, 35
               

               Conread position:
               11-209
               

               Cow position:
               chr5:32338936-32338734 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               154
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               24, 94
               

               Conread position:
               11-213
               

               Cow position:
               chr5:69099750-69099950 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               155
               

               Alignm E-value:
               8e-40
               

               Alignm gaps (pig, cow):
               111, 0
               

               Conread position:
               11-228
               

               Cow position:
               chr5:53175228-53175006 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               170
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               22, 18
               

               Conread position:
               12-141
               

               Cow position:
               chr5:57230307-57230177 (view UCSC Genome Browser custom track)
               

               Alignm length:
               131
               

               Alignm identity:
               100
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               109, 0
               

               Conread position:
               12-187
               

               Cow position:
               chr5:16939563-16939386 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               124
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               114, 0
               

               Conread position:
               12-194
               

               Cow position:
               chr5:20812577-20812761 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               135
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               110, 63
               

               Conread position:
               12-210
               

               Cow position:
               chr5:3771879-3772070 (view UCSC Genome Browser custom track)
               

               Alignm length:
               199
               

               Alignm identity:
               140
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               23, 0
               

               Conread position:
               12-221
               

               Cow position:
               chr5:12901948-12902158 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               158
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               87, 82
               

               Conread position:
               12-221
               

               Cow position:
               chr5:57767954-57767749 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               149
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               114, 93
               

               Conread position:
               12-223
               

               Cow position:
               chr5:8736248-8736037 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               161
               

               Alignm E-value:
               6e-37
               

               Alignm gaps (pig, cow):
               103, 47
               

               Conread position:
               12-224
               

               Cow position:
               chr5:19561419-19561202 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               151
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               10, 178
               

               Conread position:
               12-225
               

               Cow position:
               chr5:15991608-15991402 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               167
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               83, 0
               

               Conread position:
               12-231
               

               Cow position:
               chr5:65760501-65760281 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               153
               

               Alignm E-value:
               1e-20
               

               Alignm gaps (pig, cow):
               123, 37
               

               Conread position:
               13-246
               

               Cow position:
               chr5:60100501-60100730 (view UCSC Genome Browser custom track)
               

               Alignm length:
               240
               

               Alignm identity:
               183
               

               Alignm E-value:
               7e-38
               

               Alignm gaps (pig, cow):
               15, 23
               

               Conread position:
               13-246
               

               Cow position:
               chr5:60153806-60154035 (view UCSC Genome Browser custom track)
               

               Alignm length:
               240
               

               Alignm identity:
               183
               

               Alignm E-value:
               7e-38
               

               Alignm gaps (pig, cow):
               15, 23
               

               Conread position:
               15-197
               

               Cow position:
               chr5:62572566-62572746 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               129
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               125, 38
               

               Conread position:
               15-201
               

               Cow position:
               chr5:26894685-26894494 (view UCSC Genome Browser custom track)
               

               Alignm length:
               193
               

               Alignm identity:
               136
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               112, 177
               

               Conread position:
               15-202
               

               Cow position:
               chr5:67932438-67932246 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               141
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               105, 177
               

               Conread position:
               15-208
               

               Cow position:
               chr5:61914597-61914797 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               146
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               20, 80
               

               Conread position:
               15-208
               

               Cow position:
               chr5:62995991-62996185 (view UCSC Genome Browser custom track)
               

               Alignm length:
               196
               

               Alignm identity:
               144
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               119, 173
               

               Conread position:
               15-209
               

               Cow position:
               chr5:30561966-30562155 (view UCSC Genome Browser custom track)
               

               Alignm length:
               195
               

               Alignm identity:
               141
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               105, 0
               

               Conread position:
               15-209
               

               Cow position:
               chr5:41009969-41009783 (view UCSC Genome Browser custom track)
               

               Alignm length:
               197
               

               Alignm identity:
               149
               

               Alignm E-value:
               9e-31
               

               Alignm gaps (pig, cow):
               116, 16
               

               Conread position:
               15-219
               

               Cow position:
               chr5:55756384-55756177 (view UCSC Genome Browser custom track)
               

               Alignm length:
               211
               

               Alignm identity:
               151
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               52, 88
               

               Conread position:
               15-224
               

               Cow position:
               chr5:61049366-61049577 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               153
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               95, 80
               

               Conread position:
               15-229
               

               Cow position:
               chr5:36868771-36868986 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               153
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               118, 62
               

               Conread position:
               15-234
               

               Cow position:
               chr5:17835124-17834906 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               154
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               98, 63
               

               Conread position:
               16-208
               

               Cow position:
               chr5:17086985-17086791 (view UCSC Genome Browser custom track)
               

               Alignm length:
               197
               

               Alignm identity:
               156
               

               Alignm E-value:
               8.99998e-41
               

               Alignm gaps (pig, cow):
               108, 43
               

               Conread position:
               16-221
               

               Cow position:
               chr5:3817652-3817447 (view UCSC Genome Browser custom track)
               

               Alignm length:
               207
               

               Alignm identity:
               151
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               189, 170
               

               Conread position:
               16-225
               

               Cow position:
               chr5:29172022-29172233 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               147
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               46, 96
               

               Conread position:
               17-196
               

               Cow position:
               chr5:50087806-50087982 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               130
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               92, 25
               

               Conread position:
               17-229
               

               Cow position:
               chr5:56433920-56434132 (view UCSC Genome Browser custom track)
               

               Alignm length:
               217
               

               Alignm identity:
               154
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               107, 7
               

               Conread position:
               18-187
               

               Cow position:
               chr5:51125972-51125812 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               123
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               103, 0
               

               Conread position:
               18-194
               

               Cow position:
               chr5:26097326-26097502 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               128
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               81, 76
               

               Conread position:
               18-221
               

               Cow position:
               chr5:54875659-54875453 (view UCSC Genome Browser custom track)
               

               Alignm length:
               210
               

               Alignm identity:
               147
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               35, 6
               

               Conread position:
               18-222
               

               Cow position:
               chr5:16185415-16185618 (view UCSC Genome Browser custom track)
               

               Alignm length:
               207
               

               Alignm identity:
               147
               

               Alignm E-value:
               7e-28
               

               Alignm gaps (pig, cow):
               108, 170
               

               Conread position:
               18-225
               

               Cow position:
               chr5:42064242-42064449 (view UCSC Genome Browser custom track)
               

               Alignm length:
               210
               

               Alignm identity:
               143
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               108, 170
               

               Conread position:
               18-227
               

               Cow position:
               chr5:12562723-12562517 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               159
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               39, 81
               

               Conread position:
               18-230
               

               Cow position:
               chr5:40122573-40122361 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               153
               

               Alignm E-value:
               9e-31
               

               Alignm gaps (pig, cow):
               120, 176
               

               Conread position:
               19-203
               

               Cow position:
               chr5:65776347-65776156 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               138
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               84, 146
               

               Conread position:
               19-209
               

               Cow position:
               chr5:42845555-42845370 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               141
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               60, 78
               

               Conread position:
               19-223
               

               Cow position:
               chr5:35394395-35394196 (view UCSC Genome Browser custom track)
               

               Alignm length:
               207
               

               Alignm identity:
               152
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               185, 105
               

               Conread position:
               19-225
               

               Cow position:
               chr5:54127328-54127529 (view UCSC Genome Browser custom track)
               

               Alignm length:
               207
               

               Alignm identity:
               144
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               107, 0
               

               Conread position:
               19-229
               

               Cow position:
               chr5:15364307-15364518 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               155
               

               Alignm E-value:
               8e-30
               

               Alignm gaps (pig, cow):
               101, 40
               

               Conread position:
               20-208
               

               Cow position:
               chr5:24915488-24915299 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               135
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               113, 168
               

               Conread position:
               20-229
               

               Cow position:
               chr5:43465564-43465775 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               147
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               106, 74
               

               Conread position:
               20-229
               

               Cow position:
               chr5:56549405-56549618 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               152
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               93, 74
               

               Conread position:
               20-231
               

               Cow position:
               chr5:20843356-20843148 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               151
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               56, 93
               

               Conread position:
               21-209
               

               Cow position:
               chr5:6438981-6438797 (view UCSC Genome Browser custom track)
               

               Alignm length:
               190
               

               Alignm identity:
               148
               

               Alignm E-value:
               5e-36
               

               Alignm gaps (pig, cow):
               183, 12
               

               Conread position:
               21-220
               

               Cow position:
               chr5:70591594-70591777 (view UCSC Genome Browser custom track)
               

               Alignm length:
               200
               

               Alignm identity:
               146
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               102, 0
               

               Conread position:
               22-141
               

               Cow position:
               chr5:61810812-61810931 (view UCSC Genome Browser custom track)
               

               Alignm length:
               120
               

               Alignm identity:
               95
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               22-221
               

               Cow position:
               chr5:46681678-46681484 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               142
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               109, 74
               

               Conread position:
               22-242
               

               Cow position:
               chr5:43839958-43839734 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               158
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               84, 73
               

               Conread position:
               23-207
               

               Cow position:
               chr5:6876926-6876740 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               144
               

               Alignm E-value:
               5e-35
               

               Alignm gaps (pig, cow):
               43, 166
               

               Conread position:
               23-208
               

               Cow position:
               chr5:22102600-22102779 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               135
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               76, 71
               

               Conread position:
               23-228
               

               Cow position:
               chr5:49407351-49407146 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               141
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               103, 73
               

               Conread position:
               23-229
               

               Cow position:
               chr5:48062075-48061860 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               159
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               103, 79
               

               Conread position:
               23-230
               

               Cow position:
               chr5:63241019-63241228 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               147
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               101, 165
               

               Conread position:
               24-228
               

               Cow position:
               chr5:54340808-54341011 (view UCSC Genome Browser custom track)
               

               Alignm length:
               209
               

               Alignm identity:
               148
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               13, 9
               

               Conread position:
               26-164
               

               Cow position:
               chr5:60126735-60126879 (view UCSC Genome Browser custom track)
               

               Alignm length:
               145
               

               Alignm identity:
               116
               

               Alignm E-value:
               8e-29
               

               Alignm gaps (pig, cow):
               98, 0
               

               Conread position:
               26-202
               

               Cow position:
               chr5:63234784-63234602 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               132
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               95, 166
               

               Conread position:
               26-214
               

               Cow position:
               chr5:73167966-73167781 (view UCSC Genome Browser custom track)
               

               Alignm length:
               190
               

               Alignm identity:
               132
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               177, 90
               

               Conread position:
               26-221
               

               Cow position:
               chr5:57755987-57755795 (view UCSC Genome Browser custom track)
               

               Alignm length:
               198
               

               Alignm identity:
               140
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               100, 38
               

               Conread position:
               26-229
               

               Cow position:
               chr5:49919969-49920171 (view UCSC Genome Browser custom track)
               

               Alignm length:
               207
               

               Alignm identity:
               142
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               26, 16
               

               Conread position:
               29-196
               

               Cow position:
               chr5:65745717-65745554 (view UCSC Genome Browser custom track)
               

               Alignm length:
               168
               

               Alignm identity:
               126
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               66, 0
               

               Conread position:
               29-228
               

               Cow position:
               chr5:39815453-39815256 (view UCSC Genome Browser custom track)
               

               Alignm length:
               207
               

               Alignm identity:
               158
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               87, 57
               

               Conread position:
               30-203
               

               Cow position:
               chr5:5017425-5017592 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               129
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               44, 13
               

               Conread position:
               32-209
               

               Cow position:
               chr5:37253480-37253650 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               144
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               81, 0
               

               Conread position:
               32-221
               

               Cow position:
               chr5:34918397-34918584 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               155
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               179, 89
               

               Conread position:
               32-228
               

               Cow position:
               chr5:67950735-67950539 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               139
               

               Alignm E-value:
               1e-20
               

               Alignm gaps (pig, cow):
               95, 62
               

               Conread position:
               33-208
               

               Cow position:
               chr5:36143036-36143204 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               130
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               77, 61
               

               Conread position:
               33-208
               

               Cow position:
               chr5:58401621-58401791 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               132
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               102, 0
               

               Conread position:
               33-219
               

               Cow position:
               chr5:14454093-14454281 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               137
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               80, 61
               

               Conread position:
               33-224
               

               Cow position:
               chr5:52029459-52029649 (view UCSC Genome Browser custom track)
               

               Alignm length:
               198
               

               Alignm identity:
               143
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               145, 36
               

               Conread position:
               33-229
               

               Cow position:
               chr5:32935796-32935991 (view UCSC Genome Browser custom track)
               

               Alignm length:
               200
               

               Alignm identity:
               140
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               97, 35
               

               Conread position:
               33-229
               

               Cow position:
               chr5:62011735-62011932 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               144
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               100, 153
               

               Conread position:
               33-231
               

               Cow position:
               chr5:60207760-60207953 (view UCSC Genome Browser custom track)
               

               Alignm length:
               199
               

               Alignm identity:
               158
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               81, 0
               

               Conread position:
               33-234
               

               Cow position:
               chr5:2355572-2355770 (view UCSC Genome Browser custom track)
               

               Alignm length:
               205
               

               Alignm identity:
               147
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               38, 62
               

               Conread position:
               34-199
               

               Cow position:
               chr5:69682296-69682130 (view UCSC Genome Browser custom track)
               

               Alignm length:
               168
               

               Alignm identity:
               118
               

               Alignm E-value:
               1e-20
               

               Alignm gaps (pig, cow):
               104, 154
               

               Conread position:
               34-201
               

               Cow position:
               chr5:29599493-29599333 (view UCSC Genome Browser custom track)
               

               Alignm length:
               168
               

               Alignm identity:
               139
               

               Alignm E-value:
               7e-39
               

               Alignm gaps (pig, cow):
               90, 0
               

               Conread position:
               34-208
               

               Cow position:
               chr5:29895224-29895397 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               133
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               152, 0
               

               Conread position:
               34-210
               

               Cow position:
               chr5:49207274-49207101 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               141
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               90, 0
               

               Conread position:
               34-220
               

               Cow position:
               chr5:52192376-52192202 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               141
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               90, 0
               

               Conread position:
               34-222
               

               Cow position:
               chr5:70572424-70572599 (view UCSC Genome Browser custom track)
               

               Alignm length:
               190
               

               Alignm identity:
               146
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               171, 25
               

               Conread position:
               35-207
               

               Cow position:
               chr5:38420655-38420833 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               138
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               89, 21
               

               Conread position:
               35-208
               

               Cow position:
               chr5:1104825-1104649 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               125
               

               Alignm E-value:
               1e-20
               

               Alignm gaps (pig, cow):
               78, 61
               

               Conread position:
               35-228
               

               Cow position:
               chr5:74065463-74065277 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               143
               

               Alignm E-value:
               8e-29
               

               Alignm gaps (pig, cow):
               66, 0
               

               Conread position:
               36-206
               

               Cow position:
               chr5:19294471-19294295 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               132
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               83, 65
               

               Conread position:
               36-209
               

               Cow position:
               chr5:57687528-57687353 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               128
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               35, 153
               

               Conread position:
               36-221
               

               Cow position:
               chr5:20995031-20994852 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               135
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               90, 125
               

               Conread position:
               36-221
               

               Cow position:
               chr5:52849140-52849320 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               139
               

               Alignm E-value:
               9e-31
               

               Alignm gaps (pig, cow):
               92, 0
               

               Conread position:
               36-223
               

               Cow position:
               chr5:63940006-63939818 (view UCSC Genome Browser custom track)
               

               Alignm length:
               193
               

               Alignm identity:
               145
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               63, 23
               

               Conread position:
               36-227
               

               Cow position:
               chr5:34347679-34347487 (view UCSC Genome Browser custom track)
               

               Alignm length:
               196
               

               Alignm identity:
               148
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               63, 19
               

               Conread position:
               36-229
               

               Cow position:
               chr5:58519361-58519170 (view UCSC Genome Browser custom track)
               

               Alignm length:
               196
               

               Alignm identity:
               141
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               98, 145
               

               Conread position:
               36-230
               

               Cow position:
               chr5:7012795-7012605 (view UCSC Genome Browser custom track)
               

               Alignm length:
               197
               

               Alignm identity:
               146
               

               Alignm E-value:
               8e-30
               

               Alignm gaps (pig, cow):
               97, 59
               

               Conread position:
               36-230
               

               Cow position:
               chr5:57087008-57086815 (view UCSC Genome Browser custom track)
               

               Alignm length:
               197
               

               Alignm identity:
               143
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               70, 59
               

               Conread position:
               36-231
               

               Cow position:
               chr5:51053594-51053401 (view UCSC Genome Browser custom track)
               

               Alignm length:
               197
               

               Alignm identity:
               142
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               94, 151
               

               Conread position:
               37-147
               

               Cow position:
               chr5:62802443-62802556 (view UCSC Genome Browser custom track)
               

               Alignm length:
               114
               

               Alignm identity:
               91
               

               Alignm E-value:
               1e-20
               

               Alignm gaps (pig, cow):
               95, 0
               

               Conread position:
               37-178
               

               Cow position:
               chr5:66379422-66379564 (view UCSC Genome Browser custom track)
               

               Alignm length:
               145
               

               Alignm identity:
               109
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               51, 107
               

               Conread position:
               37-196
               

               Cow position:
               chr5:56753989-56754146 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               124
               

               Alignm E-value:
               9e-31
               

               Alignm gaps (pig, cow):
               72, 0
               

               Conread position:
               37-221
               

               Cow position:
               chr5:17987838-17987652 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               136
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               102, 38
               

               Conread position:
               37-228
               

               Cow position:
               chr5:6245606-6245418 (view UCSC Genome Browser custom track)
               

               Alignm length:
               193
               

               Alignm identity:
               146
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               171, 9
               

               Conread position:
               37-230
               

               Cow position:
               chr5:5016481-5016671 (view UCSC Genome Browser custom track)
               

               Alignm length:
               195
               

               Alignm identity:
               138
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               159, 93
               

               Conread position:
               37-230
               

               Cow position:
               chr5:21339213-21339013 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               149
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               83, 158
               

               Conread position:
               37-230
               

               Cow position:
               chr5:55783907-55783715 (view UCSC Genome Browser custom track)
               

               Alignm length:
               196
               

               Alignm identity:
               139
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               89, 151
               

               Conread position:
               37-231
               

               Cow position:
               chr5:21721414-21721228 (view UCSC Genome Browser custom track)
               

               Alignm length:
               195
               

               Alignm identity:
               160
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               87, 0
               

               Conread position:
               37-238
               

               Cow position:
               chr5:18289178-18289370 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               145
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               90, 0
               

               Conread position:
               39-204
               

               Cow position:
               chr5:9559479-9559635 (view UCSC Genome Browser custom track)
               

               Alignm length:
               166
               

               Alignm identity:
               123
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               76, 0
               

               Conread position:
               39-208
               

               Cow position:
               chr5:52211629-52211465 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               125
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               72, 0
               

               Conread position:
               39-210
               

               Cow position:
               chr5:75478857-75478690 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               126
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               100, 0
               

               Conread position:
               39-229
               

               Cow position:
               chr5:55176944-55177126 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               141
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               14, 23
               

               Conread position:
               39-234
               

               Cow position:
               chr5:64843913-64843712 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               144
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               86, 153
               

               Conread position:
               40-203
               

               Cow position:
               chr5:40531480-40531311 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               134
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               40, 109
               

               Conread position:
               40-221
               

               Cow position:
               chr5:31648478-31648656 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               136
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               69, 54
               

               Conread position:
               40-225
               

               Cow position:
               chr5:25462147-25462327 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               136
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               75, 85
               

               Conread position:
               41-208
               

               Cow position:
               chr5:63300138-63300304 (view UCSC Genome Browser custom track)
               

               Alignm length:
               168
               

               Alignm identity:
               124
               

               Alignm E-value:
               7e-28
               

               Alignm gaps (pig, cow):
               145, 0
               

               Conread position:
               41-213
               

               Cow position:
               chr5:34787634-34787804 (view UCSC Genome Browser custom track)
               

               Alignm length:
               174
               

               Alignm identity:
               134
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               163, 83
               

               Conread position:
               41-221
               

               Cow position:
               chr5:66287005-66287180 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               136
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               75, 0
               

               Conread position:
               44-203
               

               Cow position:
               chr5:4824211-4824374 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               129
               

               Alignm E-value:
               8e-30
               

               Alignm gaps (pig, cow):
               24, 147
               

               Conread position:
               44-208
               

               Cow position:
               chr5:5030506-5030665 (view UCSC Genome Browser custom track)
               

               Alignm length:
               166
               

               Alignm identity:
               132
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               80, 13
               

               Conread position:
               44-209
               

               Cow position:
               chr5:67339946-67340108 (view UCSC Genome Browser custom track)
               

               Alignm length:
               166
               

               Alignm identity:
               129
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               92, 0
               

               Conread position:
               44-212
               

               Cow position:
               chr5:26149097-26149265 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               122
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               90, 106
               

               Conread position:
               44-225
               

               Cow position:
               chr5:35208324-35208505 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               133
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               81, 144
               

               Conread position:
               44-226
               

               Cow position:
               chr5:19968296-19968115 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               138
               

               Alignm E-value:
               7e-28
               

               Alignm gaps (pig, cow):
               87, 110
               

               Conread position:
               44-229
               

               Cow position:
               chr5:4981513-4981697 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               136
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               139, 96
               

               Conread position:
               44-229
               

               Cow position:
               chr5:41984418-41984585 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               139
               

               Alignm E-value:
               1e-20
               

               Alignm gaps (pig, cow):
               181, 73
               

               Conread position:
               44-247
               

               Cow position:
               chr5:59662995-59662785 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               150
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               83, 142
               

               Conread position:
               45-187
               

               Cow position:
               chr5:25597896-25598035 (view UCSC Genome Browser custom track)
               

               Alignm length:
               143
               

               Alignm identity:
               109
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               77, 0
               

               Conread position:
               45-240
               

               Cow position:
               chr5:32975822-32976022 (view UCSC Genome Browser custom track)
               

               Alignm length:
               205
               

               Alignm identity:
               163
               

               Alignm E-value:
               8e-40
               

               Alignm gaps (pig, cow):
               80, 142
               

               Conread position:
               46-208
               

               Cow position:
               chr5:43611763-43611925 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               120
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               80, 134
               

               Conread position:
               46-217
               

               Cow position:
               chr5:46479177-46479011 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               135
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               165, 78
               

               Conread position:
               46-226
               

               Cow position:
               chr5:30492729-30492547 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               134
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               79, 142
               

               Conread position:
               46-229
               

               Cow position:
               chr5:57447601-57447418 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               139
               

               Alignm E-value:
               8e-29
               

               Alignm gaps (pig, cow):
               59, 48
               

               Conread position:
               47-207
               

               Cow position:
               chr5:69765968-69765809 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               120
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               139, 0
               

               Conread position:
               47-233
               

               Cow position:
               chr5:47335094-47335278 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               134
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               154, 75
               

               Conread position:
               48-235
               

               Cow position:
               chr5:47960194-47960016 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               139
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               61, 0
               

               Conread position:
               51-214
               

               Cow position:
               chr5:56643137-56643300 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               122
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               100, 136
               

               Conread position:
               51-221
               

               Cow position:
               chr5:41736252-41736421 (view UCSC Genome Browser custom track)
               

               Alignm length:
               174
               

               Alignm identity:
               127
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               62, 43
               

               Conread position:
               51-223
               

               Cow position:
               chr5:30221708-30221537 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               126
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               75, 43
               

               Conread position:
               51-223
               

               Cow position:
               chr5:56525642-56525468 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               126
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               58, 43
               

               Conread position:
               51-227
               

               Cow position:
               chr5:58237380-58237209 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               133
               

               Alignm E-value:
               1e-20
               

               Alignm gaps (pig, cow):
               62, 44
               

               Conread position:
               51-228
               

               Cow position:
               chr5:45405114-45405292 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               131
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               62, 44
               

               Conread position:
               51-229
               

               Cow position:
               chr5:24108990-24108809 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               136
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               59, 51
               

               Conread position:
               51-231
               

               Cow position:
               chr5:37941737-37941558 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               136
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               47, 33
               

               Conread position:
               52-229
               

               Cow position:
               chr5:55949608-55949434 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               132
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               74, 135
               

               Conread position:
               55-227
               

               Cow position:
               chr5:58487448-58487617 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               134
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               5, 40
               

               Conread position:
               57-203
               

               Cow position:
               chr5:57584951-57585097 (view UCSC Genome Browser custom track)
               

               Alignm length:
               148
               

               Alignm identity:
               108
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               5, 130
               

               Conread position:
               58-208
               

               Cow position:
               chr5:64061096-64061239 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               117
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               76, 0
               

               Conread position:
               58-231
               

               Cow position:
               chr5:54960312-54960140 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               126
               

               Alignm E-value:
               1e-20
               

               Alignm gaps (pig, cow):
               155, 19
               

               Conread position:
               59-221
               

               Cow position:
               chr5:32975482-32975322 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               120
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               67, 129
               

               Conread position:
               59-231
               

               Cow position:
               chr5:45854575-45854753 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               139
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               40, 35
               

               Conread position:
               61-202
               

               Cow position:
               chr5:64142575-64142434 (view UCSC Genome Browser custom track)
               

               Alignm length:
               144
               

               Alignm identity:
               108
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               65, 112
               

               Conread position:
               61-206
               

               Cow position:
               chr5:59958254-59958393 (view UCSC Genome Browser custom track)
               

               Alignm length:
               147
               

               Alignm identity:
               113
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               41, 33
               

               Conread position:
               61-210
               

               Cow position:
               chr5:28660310-28660459 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               111
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               65, 126
               

               Conread position:
               61-215
               

               Cow position:
               chr5:55943636-55943485 (view UCSC Genome Browser custom track)
               

               Alignm length:
               156
               

               Alignm identity:
               121
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               38, 33
               

               Conread position:
               61-217
               

               Cow position:
               chr5:14419930-14419783 (view UCSC Genome Browser custom track)
               

               Alignm length:
               157
               

               Alignm identity:
               120
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               50, 0
               

               Conread position:
               61-219
               

               Cow position:
               chr5:55749957-55749799 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               122
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               38, 30
               

               Conread position:
               61-220
               

               Cow position:
               chr5:9487005-9486845 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               116
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               71, 127
               

               Conread position:
               61-220
               

               Cow position:
               chr5:56327639-56327488 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               120
               

               Alignm E-value:
               1e-20
               

               Alignm gaps (pig, cow):
               38, 33
               

               Conread position:
               61-221
               

               Cow position:
               chr5:17537593-17537440 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               126
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               84, 0
               

               Conread position:
               61-221
               

               Cow position:
               chr5:56563834-56563988 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               122
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               37, 33
               

               Conread position:
               61-228
               

               Cow position:
               chr5:35235609-35235440 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               131
               

               Alignm E-value:
               9e-31
               

               Alignm gaps (pig, cow):
               66, 127
               

               Conread position:
               61-228
               

               Cow position:
               chr5:62811904-62812074 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               125
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               38, 33
               

               Conread position:
               61-229
               

               Cow position:
               chr5:12566463-12566294 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               120
               

               Alignm E-value:
               1e-20
               

               Alignm gaps (pig, cow):
               146, 125
               

               Conread position:
               61-229
               

               Cow position:
               chr5:19626658-19626817 (view UCSC Genome Browser custom track)
               

               Alignm length:
               169
               

               Alignm identity:
               138
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               61-229
               

               Cow position:
               chr5:65140379-65140547 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               126
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               73, 34
               

               Conread position:
               61-230
               

               Cow position:
               chr5:43815737-43815570 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               126
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               60, 126
               

               Conread position:
               61-230
               

               Cow position:
               chr5:53779235-53779404 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               128
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               150, 125
               

               Conread position:
               61-231
               

               Cow position:
               chr5:15770376-15770205 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               129
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               56, 129
               

               Conread position:
               61-231
               

               Cow position:
               chr5:56624437-56624265 (view UCSC Genome Browser custom track)
               

               Alignm length:
               174
               

               Alignm identity:
               133
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               61, 128
               

               Conread position:
               61-232
               

               Cow position:
               chr5:25446965-25447137 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               131
               

               Alignm E-value:
               7e-28
               

               Alignm gaps (pig, cow):
               61, 33
               

               Conread position:
               62-203
               

               Cow position:
               chr5:31234793-31234925 (view UCSC Genome Browser custom track)
               

               Alignm length:
               142
               

               Alignm identity:
               109
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               74, 0
               

               Conread position:
               63-199
               

               Cow position:
               chr5:15077552-15077417 (view UCSC Genome Browser custom track)
               

               Alignm length:
               137
               

               Alignm identity:
               101
               

               Alignm E-value:
               1e-20
               

               Alignm gaps (pig, cow):
               123, 0
               

               Conread position:
               63-202
               

               Cow position:
               chr5:57302847-57302993 (view UCSC Genome Browser custom track)
               

               Alignm length:
               148
               

               Alignm identity:
               114
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               58, 131
               

               Conread position:
               63-225
               

               Cow position:
               chr5:3627095-3626935 (view UCSC Genome Browser custom track)
               

               Alignm length:
               166
               

               Alignm identity:
               135
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               135, 31
               

               Conread position:
               63-228
               

               Cow position:
               chr5:4728156-4728315 (view UCSC Genome Browser custom track)
               

               Alignm length:
               166
               

               Alignm identity:
               130
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               61, 0
               

               Conread position:
               63-233
               

               Cow position:
               chr5:41226924-41226752 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               127
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               50, 31
               

               Conread position:
               64-207
               

               Cow position:
               chr5:21520358-21520225 (view UCSC Genome Browser custom track)
               

               Alignm length:
               144
               

               Alignm identity:
               116
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               61, 0
               

               Conread position:
               64-219
               

               Cow position:
               chr5:48104344-48104498 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               127
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               30, 73
               

               Conread position:
               64-230
               

               Cow position:
               chr5:18578975-18579138 (view UCSC Genome Browser custom track)
               

               Alignm length:
               169
               

               Alignm identity:
               134
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               39, 71
               

               Conread position:
               65-231
               

               Cow position:
               chr5:59395746-59395916 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               131
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               48, 30
               

               Conread position:
               67-230
               

               Cow position:
               chr5:61593352-61593512 (view UCSC Genome Browser custom track)
               

               Alignm length:
               166
               

               Alignm identity:
               124
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               39, 18
               

               Conread position:
               69-229
               

               Cow position:
               chr5:1122183-1122347 (view UCSC Genome Browser custom track)
               

               Alignm length:
               166
               

               Alignm identity:
               120
               

               Alignm E-value:
               1e-20
               

               Alignm gaps (pig, cow):
               17, 120
               

               Conread position:
               70-221
               

               Cow position:
               chr5:74049913-74050060 (view UCSC Genome Browser custom track)
               

               Alignm length:
               152
               

               Alignm identity:
               129
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               116, 0
               

               Conread position:
               70-228
               

               Cow position:
               chr5:14000734-14000884 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               120
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               46, 0
               

               Conread position:
               71-221
               

               Cow position:
               chr5:52153019-52152868 (view UCSC Genome Browser custom track)
               

               Alignm length:
               153
               

               Alignm identity:
               116
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               56, 117
               

               Conread position:
               72-220
               

               Cow position:
               chr5:41639505-41639357 (view UCSC Genome Browser custom track)
               

               Alignm length:
               152
               

               Alignm identity:
               113
               

               Alignm E-value:
               1e-20
               

               Alignm gaps (pig, cow):
               27, 22
               

               Conread position:
               73-203
               

               Cow position:
               chr5:43982408-43982538 (view UCSC Genome Browser custom track)
               

               Alignm length:
               132
               

               Alignm identity:
               101
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               49, 114
               

               Conread position:
               73-213
               

               Cow position:
               chr5:49508706-49508567 (view UCSC Genome Browser custom track)
               

               Alignm length:
               143
               

               Alignm identity:
               108
               

               Alignm E-value:
               1e-20
               

               Alignm gaps (pig, cow):
               6, 64
               

               Conread position:
               74-210
               

               Cow position:
               chr5:43408247-43408110 (view UCSC Genome Browser custom track)
               

               Alignm length:
               139
               

               Alignm identity:
               107
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               130, 112
               

               Conread position:
               78-220
               

               Cow position:
               chr5:54712973-54712830 (view UCSC Genome Browser custom track)
               

               Alignm length:
               145
               

               Alignm identity:
               112
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               48, 109
               

               Conread position:
               78-229
               

               Cow position:
               chr5:41935560-41935410 (view UCSC Genome Browser custom track)
               

               Alignm length:
               154
               

               Alignm identity:
               114
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               60, 110
               

               Conread position:
               80-206
               

               Cow position:
               chr5:50703950-50703823 (view UCSC Genome Browser custom track)
               

               Alignm length:
               130
               

               Alignm identity:
               103
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               26, 15
               

               Conread position:
               80-221
               

               Cow position:
               chr5:44582670-44582524 (view UCSC Genome Browser custom track)
               

               Alignm length:
               152
               

               Alignm identity:
               119
               

               Alignm E-value:
               1e-20
               

               Alignm gaps (pig, cow):
               19, 14
               

               Conread position:
               85-230
               

               Cow position:
               chr5:56428470-56428327 (view UCSC Genome Browser custom track)
               

               Alignm length:
               148
               

               Alignm identity:
               112
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               41, 103
               

               Conread position:
               86-223
               

               Cow position:
               chr5:20736772-20736635 (view UCSC Genome Browser custom track)
               

               Alignm length:
               141
               

               Alignm identity:
               108
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               119, 39
               

               Conread position:
               86-224
               

               Cow position:
               chr5:74690149-74690010 (view UCSC Genome Browser custom track)
               

               Alignm length:
               141
               

               Alignm identity:
               117
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               52, 102
               

               Conread position:
               86-230
               

               Cow position:
               chr5:62543944-62544082 (view UCSC Genome Browser custom track)
               

               Alignm length:
               148
               

               Alignm identity:
               115
               

               Alignm E-value:
               1e-20
               

               Alignm gaps (pig, cow):
               19, 9
               

               Conread position:
               87-230
               

               Cow position:
               chr5:52032203-52032061 (view UCSC Genome Browser custom track)
               

               Alignm length:
               146
               

               Alignm identity:
               112
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               39, 29
               

               Conread position:
               89-229
               

               Cow position:
               chr5:32672728-32672585 (view UCSC Genome Browser custom track)
               

               Alignm length:
               146
               

               Alignm identity:
               112
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               10, 100
               

               Conread position:
               89-233
               

               Cow position:
               chr5:21237783-21237642 (view UCSC Genome Browser custom track)
               

               Alignm length:
               146
               

               Alignm identity:
               117
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               66, 27
               

               Conread position:
               90-220
               

               Cow position:
               chr5:63940339-63940216 (view UCSC Genome Browser custom track)
               

               Alignm length:
               131
               

               Alignm identity:
               109
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               33, 0
               

               Conread position:
               91-227
               

               Cow position:
               chr5:8149196-8149064 (view UCSC Genome Browser custom track)
               

               Alignm length:
               137
               

               Alignm identity:
               108
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               102-236
               

               Cow position:
               chr5:72160206-72160337 (view UCSC Genome Browser custom track)
               

               Alignm length:
               136
               

               Alignm identity:
               107
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               114, 39
               

               Conread position:
               103-221
               

               Cow position:
               chr5:55414316-55414201 (view UCSC Genome Browser custom track)
               

               Alignm length:
               119
               

               Alignm identity:
               98
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               25, 0
               

               Conread position:
               103-225
               

               Cow position:
               chr5:57561749-57561869 (view UCSC Genome Browser custom track)
               

               Alignm length:
               124
               

               Alignm identity:
               98
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               102, 13
               

               Conread position:
               105-242
               

               Cow position:
               chr5:25677182-25677319 (view UCSC Genome Browser custom track)
               

               Alignm length:
               140
               

               Alignm identity:
               107
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               22, 82
               

               Conread position:
               123-226
               

               Cow position:
               chr5:25531370-25531471 (view UCSC Genome Browser custom track)
               

               Alignm length:
               104
               

               Alignm identity:
               88
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               126-230
               

               Cow position:
               chr5:35725516-35725413 (view UCSC Genome Browser custom track)
               

               Alignm length:
               105
               

               Alignm identity:
               86
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               60, 0
               
Show alignments to all cow chromosomes.
Conread position:	1-111
Cow position:	chr5:15598215-15598108 (view UCSC Genome Browser custom track)
Alignm length:	111
Alignm identity:	90
Alignm E-value:	1e-21
Alignm gaps (pig, cow):	70, 0
Conread position:	1-120
Cow position:	chr5:56517124-56517243 (view UCSC Genome Browser custom track)
Alignm length:	121
Alignm identity:	95
Alignm E-value:	1e-21
Alignm gaps (pig, cow):	27, 47
Conread position:	1-126
Cow position:	chr5:6045314-6045441 (view UCSC Genome Browser custom track)
Alignm length:	128
Alignm identity:	98
Alignm E-value:	3e-21
Alignm gaps (pig, cow):	32, 0
Conread position:	1-131
Cow position:	chr5:54375482-54375352 (view UCSC Genome Browser custom track)
Alignm length:	131
Alignm identity:	104
Alignm E-value:	2e-27
Alignm gaps (pig, cow):	0, 0
Conread position:	1-134
Cow position:	chr5:41545873-41545740 (view UCSC Genome Browser custom track)
Alignm length:	137
Alignm identity:	105
Alignm E-value:	1e-20
Alignm gaps (pig, cow):	56, 37
Conread position:	1-135
Cow position:	chr5:62378803-62378934 (view UCSC Genome Browser custom track)
Alignm length:	135
Alignm identity:	109
Alignm E-value:	2e-28
Alignm gaps (pig, cow):	47, 0
Conread position:	1-136
Cow position:	chr5:9170561-9170429 (view UCSC Genome Browser custom track)
Alignm length:	136
Alignm identity:	111
Alignm E-value:	8e-29
Alignm gaps (pig, cow):	55, 0
Conread position:	1-139
Cow position:	chr5:43929715-43929578 (view UCSC Genome Browser custom track)
Alignm length:	139
Alignm identity:	111
Alignm E-value:	3e-29
Alignm gaps (pig, cow):	23, 0
Conread position:	1-141
Cow position:	chr5:7698020-7698160 (view UCSC Genome Browser custom track)
Alignm length:	142
Alignm identity:	105
Alignm E-value:	3e-21
Alignm gaps (pig, cow):	76, 66
Conread position:	1-148
Cow position:	chr5:8820992-8820845 (view UCSC Genome Browser custom track)
Alignm length:	149
Alignm identity:	108
Alignm E-value:	1e-20
Alignm gaps (pig, cow):	133, 44
Conread position:	1-165
Cow position:	chr5:60183823-60183984 (view UCSC Genome Browser custom track)
Alignm length:	167
Alignm identity:	129
Alignm E-value:	3e-29
Alignm gaps (pig, cow):	31, 122
Conread position:	1-166
Cow position:	chr5:52083367-52083528 (view UCSC Genome Browser custom track)
Alignm length:	166
Alignm identity:	118
Alignm E-value:	3e-21
Alignm gaps (pig, cow):	23, 0
Conread position:	1-168
Cow position:	chr5:17605114-17604949 (view UCSC Genome Browser custom track)
Alignm length:	170
Alignm identity:	133
Alignm E-value:	3e-32
Alignm gaps (pig, cow):	97, 130
Conread position:	1-173
Cow position:	chr5:55232791-55232627 (view UCSC Genome Browser custom track)
Alignm length:	175
Alignm identity:	131
Alignm E-value:	1e-22
Alignm gaps (pig, cow):	67, 43
Conread position:	1-178
Cow position:	chr5:55795947-55795773 (view UCSC Genome Browser custom track)
Alignm length:	179
Alignm identity:	130
Alignm E-value:	2e-25
Alignm gaps (pig, cow):	50, 123
Conread position:	1-187
Cow position:	chr5:35826622-35826804 (view UCSC Genome Browser custom track)
Alignm length:	188
Alignm identity:	140
Alignm E-value:	3e-30
Alignm gaps (pig, cow):	168, 109
Conread position:	1-194
Cow position:	chr5:29353105-29352920 (view UCSC Genome Browser custom track)
Alignm length:	194
Alignm identity:	137
Alignm E-value:	1e-22
Alignm gaps (pig, cow):	94, 0
Conread position:	1-197
Cow position:	chr5:55942359-55942162 (view UCSC Genome Browser custom track)
Alignm length:	199
Alignm identity:	157
Alignm E-value:	3.9937e-43
Alignm gaps (pig, cow):	124, 187
Conread position:	1-201
Cow position:	chr5:66551877-66551673 (view UCSC Genome Browser custom track)
Alignm length:	206
Alignm identity:	158
Alignm E-value:	2e-38
Alignm gaps (pig, cow):	42, 190
Conread position:	1-202
Cow position:	chr5:60948153-60948352 (view UCSC Genome Browser custom track)
Alignm length:	202
Alignm identity:	151
Alignm E-value:	2e-36
Alignm gaps (pig, cow):	50, 0