Non-Coding RNA Search

Cow genome map


           Conread name:
           rcje38_p18.y1
        

               Conread position:
               1-114
               

               Cow position:
               chr6:32853222-32853334 (view UCSC Genome Browser custom track)
               

               Alignm length:
               114
               

               Alignm identity:
               91
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               38, 0
               

               Conread position:
               1-123
               

               Cow position:
               chr6:28977006-28976884 (view UCSC Genome Browser custom track)
               

               Alignm length:
               123
               

               Alignm identity:
               100
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1-124
               

               Cow position:
               chr6:43651786-43651909 (view UCSC Genome Browser custom track)
               

               Alignm length:
               124
               

               Alignm identity:
               98
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1-136
               

               Cow position:
               chr6:54990967-54990832 (view UCSC Genome Browser custom track)
               

               Alignm length:
               136
               

               Alignm identity:
               107
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1-137
               

               Cow position:
               chr6:51463599-51463464 (view UCSC Genome Browser custom track)
               

               Alignm length:
               138
               

               Alignm identity:
               106
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               123, 80
               

               Conread position:
               1-138
               

               Cow position:
               chr6:58597472-58597335 (view UCSC Genome Browser custom track)
               

               Alignm length:
               139
               

               Alignm identity:
               109
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               109, 123
               

               Conread position:
               1-140
               

               Cow position:
               chr6:47799327-47799468 (view UCSC Genome Browser custom track)
               

               Alignm length:
               142
               

               Alignm identity:
               106
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               133, 0
               

               Conread position:
               1-141
               

               Cow position:
               chr6:1002229-1002089 (view UCSC Genome Browser custom track)
               

               Alignm length:
               141
               

               Alignm identity:
               108
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1-169
               

               Cow position:
               chr6:2153565-2153395 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               121
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               98, 93
               

               Conread position:
               1-169
               

               Cow position:
               chr6:57571513-57571679 (view UCSC Genome Browser custom track)
               

               Alignm length:
               169
               

               Alignm identity:
               131
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               130, 0
               

               Conread position:
               1-173
               

               Cow position:
               chr6:21467230-21467060 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               124
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               125, 31
               

               Conread position:
               1-173
               

               Cow position:
               chr6:31078842-31078663 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               132
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               21, 107
               

               Conread position:
               1-179
               

               Cow position:
               chr6:61168789-61168976 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               147
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               120, 0
               

               Conread position:
               1-184
               

               Cow position:
               chr6:8125360-8125545 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               127
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               125, 0
               

               Conread position:
               1-187
               

               Cow position:
               chr6:1871164-1870978 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               140
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1-187
               

               Cow position:
               chr6:19695843-19696028 (view UCSC Genome Browser custom track)
               

               Alignm length:
               190
               

               Alignm identity:
               140
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               67, 32
               

               Conread position:
               1-194
               

               Cow position:
               chr6:24905661-24905847 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               143
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               71, 0
               

               Conread position:
               1-194
               

               Cow position:
               chr6:47305375-47305567 (view UCSC Genome Browser custom track)
               

               Alignm length:
               196
               

               Alignm identity:
               137
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               125, 71
               

               Conread position:
               1-195
               

               Cow position:
               chr6:2584976-2585167 (view UCSC Genome Browser custom track)
               

               Alignm length:
               195
               

               Alignm identity:
               136
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               123, 0
               

               Conread position:
               1-195
               

               Cow position:
               chr6:5114015-5113821 (view UCSC Genome Browser custom track)
               

               Alignm length:
               200
               

               Alignm identity:
               143
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               113, 41
               

               Conread position:
               1-196
               

               Cow position:
               chr6:60516860-60517065 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               160
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               127, 50
               

               Conread position:
               1-198
               

               Cow position:
               chr6:19755048-19754849 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               143
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               9, 42
               

               Conread position:
               1-201
               

               Cow position:
               chr6:38853625-38853424 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               159
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               114, 187
               

               Conread position:
               1-202
               

               Cow position:
               chr6:39358311-39358110 (view UCSC Genome Browser custom track)
               

               Alignm length:
               206
               

               Alignm identity:
               158
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               19, 130
               

               Conread position:
               1-203
               

               Cow position:
               chr6:37149223-37149416 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               143
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               134, 0
               

               Conread position:
               1-203
               

               Cow position:
               chr6:38207456-38207251 (view UCSC Genome Browser custom track)
               

               Alignm length:
               210
               

               Alignm identity:
               161
               

               Alignm E-value:
               5e-36
               

               Alignm gaps (pig, cow):
               129, 108
               

               Conread position:
               1-203
               

               Cow position:
               chr6:65903590-65903392 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               141
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               146, 85
               

               Conread position:
               1-206
               

               Cow position:
               chr6:9302683-9302486 (view UCSC Genome Browser custom track)
               

               Alignm length:
               206
               

               Alignm identity:
               157
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               43, 0
               

               Conread position:
               1-206
               

               Cow position:
               chr6:46465855-46466055 (view UCSC Genome Browser custom track)
               

               Alignm length:
               206
               

               Alignm identity:
               161
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               134, 0
               

               Conread position:
               1-206
               

               Cow position:
               chr6:60266149-60265931 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               165
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               112, 199
               

               Conread position:
               1-206
               

               Cow position:
               chr6:61109821-61110019 (view UCSC Genome Browser custom track)
               

               Alignm length:
               206
               

               Alignm identity:
               159
               

               Alignm E-value:
               7e-39
               

               Alignm gaps (pig, cow):
               71, 0
               

               Conread position:
               1-208
               

               Cow position:
               chr6:143340-143139 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               156
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               26, 0
               

               Conread position:
               1-208
               

               Cow position:
               chr6:1429674-1429873 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               144
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               94, 0
               

               Conread position:
               1-208
               

               Cow position:
               chr6:1475379-1475576 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               144
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               119, 0
               

               Conread position:
               1-208
               

               Cow position:
               chr6:12964886-12965093 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               150
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               100, 180
               

               Conread position:
               1-208
               

               Cow position:
               chr6:13653387-13653585 (view UCSC Genome Browser custom track)
               

               Alignm length:
               209
               

               Alignm identity:
               160
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               119, 40
               

               Conread position:
               1-208
               

               Cow position:
               chr6:15242868-15243078 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               163
               

               Alignm E-value:
               8.00001e-41
               

               Alignm gaps (pig, cow):
               17, 189
               

               Conread position:
               1-208
               

               Cow position:
               chr6:15300795-15300601 (view UCSC Genome Browser custom track)
               

               Alignm length:
               209
               

               Alignm identity:
               157
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               61, 41
               

               Conread position:
               1-208
               

               Cow position:
               chr6:19292835-19293037 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               149
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               94, 0
               

               Conread position:
               1-208
               

               Cow position:
               chr6:21535071-21535279 (view UCSC Genome Browser custom track)
               

               Alignm length:
               210
               

               Alignm identity:
               156
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               22, 187
               

               Conread position:
               1-208
               

               Cow position:
               chr6:23058244-23058453 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               143
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               13, 96
               

               Conread position:
               1-208
               

               Cow position:
               chr6:53024770-53024572 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               163
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               109, 0
               

               Conread position:
               1-208
               

               Cow position:
               chr6:55297061-55296853 (view UCSC Genome Browser custom track)
               

               Alignm length:
               211
               

               Alignm identity:
               143
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               108, 93
               

               Conread position:
               1-209
               

               Cow position:
               chr6:6400988-6401205 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               167
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               149, 43
               

               Conread position:
               1-209
               

               Cow position:
               chr6:53841472-53841263 (view UCSC Genome Browser custom track)
               

               Alignm length:
               211
               

               Alignm identity:
               144
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               140, 187
               

               Conread position:
               1-210
               

               Cow position:
               chr6:34569441-34569657 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               159
               

               Alignm E-value:
               9e-31
               

               Alignm gaps (pig, cow):
               133, 104
               

               Conread position:
               1-210
               

               Cow position:
               chr6:67574422-67574631 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               157
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               104, 58
               

               Conread position:
               1-211
               

               Cow position:
               chr6:47355857-47356068 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               148
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               142, 71
               

               Conread position:
               1-212
               

               Cow position:
               chr6:17068613-17068412 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               160
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               6, 0
               

               Conread position:
               1-213
               

               Cow position:
               chr6:8094255-8094042 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               166
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               49, 68
               

               Conread position:
               1-214
               

               Cow position:
               chr6:44194515-44194311 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               173
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               90, 0
               

               Conread position:
               1-215
               

               Cow position:
               chr6:67451337-67451126 (view UCSC Genome Browser custom track)
               

               Alignm length:
               217
               

               Alignm identity:
               165
               

               Alignm E-value:
               7e-40
               

               Alignm gaps (pig, cow):
               124, 180
               

               Conread position:
               1-220
               

               Cow position:
               chr6:10039757-10039978 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               151
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               125, 187
               

               Conread position:
               1-221
               

               Cow position:
               chr6:9736622-9736394 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               176
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               122, 41
               

               Conread position:
               1-221
               

               Cow position:
               chr6:67451613-67451412 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               162
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               56, 0
               

               Conread position:
               1-224
               

               Cow position:
               chr6:24110316-24110541 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               157
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               125, 34
               

               Conread position:
               1-224
               

               Cow position:
               chr6:29775656-29775871 (view UCSC Genome Browser custom track)
               

               Alignm length:
               230
               

               Alignm identity:
               170
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               123, 69
               

               Conread position:
               1-224
               

               Cow position:
               chr6:47574940-47575145 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               175
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               121, 0
               

               Conread position:
               1-224
               

               Cow position:
               chr6:55417494-55417276 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               159
               

               Alignm E-value:
               7e-29
               

               Alignm gaps (pig, cow):
               202, 123
               

               Conread position:
               1-225
               

               Cow position:
               chr6:15243289-15243515 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               178
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               125, 191
               

               Conread position:
               1-225
               

               Cow position:
               chr6:25435000-25434770 (view UCSC Genome Browser custom track)
               

               Alignm length:
               239
               

               Alignm identity:
               171
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               121, 43
               

               Conread position:
               1-225
               

               Cow position:
               chr6:36809173-36808949 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               162
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               33, 56
               

               Conread position:
               1-225
               

               Cow position:
               chr6:44636465-44636256 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               166
               

               Alignm E-value:
               7e-29
               

               Alignm gaps (pig, cow):
               210, 28
               

               Conread position:
               1-225
               

               Cow position:
               chr6:51933588-51933796 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               177
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               205, 42
               

               Conread position:
               1-225
               

               Cow position:
               chr6:59603174-59602961 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               167
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               115, 0
               

               Conread position:
               1-226
               

               Cow position:
               chr6:38640267-38640490 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               170
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               206, 185
               

               Conread position:
               1-228
               

               Cow position:
               chr6:32867184-32866963 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               179
               

               Alignm E-value:
               4.2039e-45
               

               Alignm gaps (pig, cow):
               39, 9
               

               Conread position:
               1-229
               

               Cow position:
               chr6:1941798-1941575 (view UCSC Genome Browser custom track)
               

               Alignm length:
               230
               

               Alignm identity:
               175
               

               Alignm E-value:
               9.00054e-42
               

               Alignm gaps (pig, cow):
               61, 43
               

               Conread position:
               1-229
               

               Cow position:
               chr6:5609411-5609181 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               180
               

               Alignm E-value:
               9.00054e-42
               

               Alignm gaps (pig, cow):
               115, 21
               

               Conread position:
               1-229
               

               Cow position:
               chr6:6060538-6060315 (view UCSC Genome Browser custom track)
               

               Alignm length:
               230
               

               Alignm identity:
               161
               

               Alignm E-value:
               7e-29
               

               Alignm gaps (pig, cow):
               117, 168
               

               Conread position:
               1-229
               

               Cow position:
               chr6:6201458-6201695 (view UCSC Genome Browser custom track)
               

               Alignm length:
               239
               

               Alignm identity:
               162
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               137, 192
               

               Conread position:
               1-229
               

               Cow position:
               chr6:10176268-10176039 (view UCSC Genome Browser custom track)
               

               Alignm length:
               233
               

               Alignm identity:
               161
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               125, 187
               

               Conread position:
               1-229
               

               Cow position:
               chr6:16090937-16091157 (view UCSC Genome Browser custom track)
               

               Alignm length:
               230
               

               Alignm identity:
               175
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               50, 39
               

               Conread position:
               1-229
               

               Cow position:
               chr6:35181223-35180992 (view UCSC Genome Browser custom track)
               

               Alignm length:
               233
               

               Alignm identity:
               158
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               132, 186
               

               Conread position:
               1-229
               

               Cow position:
               chr6:36202855-36203081 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               170
               

               Alignm E-value:
               6e-38
               

               Alignm gaps (pig, cow):
               109, 47
               

               Conread position:
               1-229
               

               Cow position:
               chr6:37395367-37395146 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               162
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               82, 95
               

               Conread position:
               1-229
               

               Cow position:
               chr6:50771325-50771105 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               164
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               124, 22
               

               Conread position:
               1-229
               

               Cow position:
               chr6:53932815-53932581 (view UCSC Genome Browser custom track)
               

               Alignm length:
               238
               

               Alignm identity:
               166
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               30, 51
               

               Conread position:
               1-229
               

               Cow position:
               chr6:60468272-60468492 (view UCSC Genome Browser custom track)
               

               Alignm length:
               232
               

               Alignm identity:
               169
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               87, 102
               

               Conread position:
               1-229
               

               Cow position:
               chr6:64431971-64432193 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               161
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               42, 135
               

               Conread position:
               1-230
               

               Cow position:
               chr6:12761313-12761542 (view UCSC Genome Browser custom track)
               

               Alignm length:
               233
               

               Alignm identity:
               178
               

               Alignm E-value:
               4.06377e-44
               

               Alignm gaps (pig, cow):
               124, 71
               

               Conread position:
               1-230
               

               Cow position:
               chr6:67069781-67069557 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               181
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               68, 9
               

               Conread position:
               1-231
               

               Cow position:
               chr6:13565122-13565342 (view UCSC Genome Browser custom track)
               

               Alignm length:
               232
               

               Alignm identity:
               160
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               104, 34
               

               Conread position:
               1-232
               

               Cow position:
               chr6:22876897-22876664 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               170
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               133, 186
               

               Conread position:
               1-232
               

               Cow position:
               chr6:57546187-57545966 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               175
               

               Alignm E-value:
               5e-36
               

               Alignm gaps (pig, cow):
               126, 23
               

               Conread position:
               1-236
               

               Cow position:
               chr6:35171640-35171880 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               170
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               102, 8
               

               Conread position:
               1-239
               

               Cow position:
               chr6:3936818-3937059 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               192
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               125, 32
               

               Conread position:
               2-141
               

               Cow position:
               chr6:19131465-19131604 (view UCSC Genome Browser custom track)
               

               Alignm length:
               140
               

               Alignm identity:
               102
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               2-209
               

               Cow position:
               chr6:53460532-53460331 (view UCSC Genome Browser custom track)
               

               Alignm length:
               209
               

               Alignm identity:
               162
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               171, 122
               

               Conread position:
               2-209
               

               Cow position:
               chr6:63251888-63251681 (view UCSC Genome Browser custom track)
               

               Alignm length:
               210
               

               Alignm identity:
               143
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               124, 87
               

               Conread position:
               2-212
               

               Cow position:
               chr6:12623550-12623751 (view UCSC Genome Browser custom track)
               

               Alignm length:
               211
               

               Alignm identity:
               160
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               62, 0
               

               Conread position:
               2-229
               

               Cow position:
               chr6:3952554-3952779 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               164
               

               Alignm E-value:
               8e-30
               

               Alignm gaps (pig, cow):
               97, 7
               

               Conread position:
               2-239
               

               Cow position:
               chr6:15266318-15266093 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               172
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               104, 67
               

               Conread position:
               3-213
               

               Cow position:
               chr6:50883642-50883435 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               151
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               20, 116
               

               Conread position:
               3-221
               

               Cow position:
               chr6:31847203-31846991 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               158
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               202, 21
               

               Conread position:
               3-229
               

               Cow position:
               chr6:21231560-21231768 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               167
               

               Alignm E-value:
               8e-30
               

               Alignm gaps (pig, cow):
               98, 0
               

               Conread position:
               4-113
               

               Cow position:
               chr6:57328356-57328248 (view UCSC Genome Browser custom track)
               

               Alignm length:
               110
               

               Alignm identity:
               92
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               73, 0
               

               Conread position:
               4-114
               

               Cow position:
               chr6:28999904-28999793 (view UCSC Genome Browser custom track)
               

               Alignm length:
               113
               

               Alignm identity:
               92
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               43, 99
               

               Conread position:
               4-130
               

               Cow position:
               chr6:53652077-53652203 (view UCSC Genome Browser custom track)
               

               Alignm length:
               127
               

               Alignm identity:
               97
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               4-138
               

               Cow position:
               chr6:21869612-21869478 (view UCSC Genome Browser custom track)
               

               Alignm length:
               135
               

               Alignm identity:
               104
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               4-141
               

               Cow position:
               chr6:23465996-23465859 (view UCSC Genome Browser custom track)
               

               Alignm length:
               139
               

               Alignm identity:
               113
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               112, 49
               

               Conread position:
               4-193
               

               Cow position:
               chr6:63720237-63720416 (view UCSC Genome Browser custom track)
               

               Alignm length:
               190
               

               Alignm identity:
               149
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               112, 0
               

               Conread position:
               4-198
               

               Cow position:
               chr6:60740051-60740239 (view UCSC Genome Browser custom track)
               

               Alignm length:
               195
               

               Alignm identity:
               141
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               134, 0
               

               Conread position:
               4-203
               

               Cow position:
               chr6:17997282-17997083 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               142
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               127, 29
               

               Conread position:
               4-206
               

               Cow position:
               chr6:5330449-5330651 (view UCSC Genome Browser custom track)
               

               Alignm length:
               206
               

               Alignm identity:
               153
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               101, 91
               

               Conread position:
               4-206
               

               Cow position:
               chr6:54127776-54127584 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               147
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               68, 0
               

               Conread position:
               4-207
               

               Cow position:
               chr6:57079460-57079664 (view UCSC Genome Browser custom track)
               

               Alignm length:
               206
               

               Alignm identity:
               148
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               122, 184
               

               Conread position:
               4-208
               

               Cow position:
               chr6:24536495-24536287 (view UCSC Genome Browser custom track)
               

               Alignm length:
               210
               

               Alignm identity:
               144
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               106, 187
               

               Conread position:
               4-208
               

               Cow position:
               chr6:35319097-35318895 (view UCSC Genome Browser custom track)
               

               Alignm length:
               207
               

               Alignm identity:
               142
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               48, 38
               

               Conread position:
               4-208
               

               Cow position:
               chr6:60273974-60273772 (view UCSC Genome Browser custom track)
               

               Alignm length:
               207
               

               Alignm identity:
               155
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               65, 132
               

               Conread position:
               4-209
               

               Cow position:
               chr6:2078778-2078576 (view UCSC Genome Browser custom track)
               

               Alignm length:
               206
               

               Alignm identity:
               155
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               118, 0
               

               Conread position:
               4-209
               

               Cow position:
               chr6:62669902-62670111 (view UCSC Genome Browser custom track)
               

               Alignm length:
               211
               

               Alignm identity:
               148
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               118, 187
               

               Conread position:
               4-210
               

               Cow position:
               chr6:5095505-5095299 (view UCSC Genome Browser custom track)
               

               Alignm length:
               211
               

               Alignm identity:
               149
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               120, 177
               

               Conread position:
               4-210
               

               Cow position:
               chr6:21235079-21235288 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               149
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               33, 179
               

               Conread position:
               4-210
               

               Cow position:
               chr6:55282257-55282051 (view UCSC Genome Browser custom track)
               

               Alignm length:
               210
               

               Alignm identity:
               163
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               66, 184
               

               Conread position:
               4-215
               

               Cow position:
               chr6:26728495-26728297 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               156
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               86, 82
               

               Conread position:
               4-221
               

               Cow position:
               chr6:21184186-21183969 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               160
               

               Alignm E-value:
               9e-31
               

               Alignm gaps (pig, cow):
               95, 73
               

               Conread position:
               4-221
               

               Cow position:
               chr6:24468359-24468147 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               172
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               120, 0
               

               Conread position:
               4-223
               

               Cow position:
               chr6:48435871-48436085 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               157
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               122, 38
               

               Conread position:
               4-224
               

               Cow position:
               chr6:67950992-67951212 (view UCSC Genome Browser custom track)
               

               Alignm length:
               230
               

               Alignm identity:
               165
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               119, 29
               

               Conread position:
               4-225
               

               Cow position:
               chr6:21470392-21470176 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               167
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               135, 0
               

               Conread position:
               4-225
               

               Cow position:
               chr6:44078555-44078772 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               155
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               196, 30
               

               Conread position:
               4-226
               

               Cow position:
               chr6:60850737-60850954 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               170
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               133, 0
               

               Conread position:
               4-227
               

               Cow position:
               chr6:23696037-23696250 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               171
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               120, 0
               

               Conread position:
               4-227
               

               Cow position:
               chr6:62078959-62079182 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               154
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               172, 121
               

               Conread position:
               4-228
               

               Cow position:
               chr6:42483452-42483673 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               151
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               33, 0
               

               Conread position:
               4-229
               

               Cow position:
               chr6:17414410-17414192 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               177
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               29, 120
               

               Conread position:
               4-229
               

               Cow position:
               chr6:58459758-58459974 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               171
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               91, 0
               

               Conread position:
               4-230
               

               Cow position:
               chr6:32453422-32453651 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               168
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               96, 81
               

               Conread position:
               4-230
               

               Cow position:
               chr6:62056651-62056874 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               172
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               219, 121
               

               Conread position:
               4-233
               

               Cow position:
               chr6:7128366-7128143 (view UCSC Genome Browser custom track)
               

               Alignm length:
               230
               

               Alignm identity:
               177
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               97, 0
               

               Conread position:
               4-241
               

               Cow position:
               chr6:17313772-17314008 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               169
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               118, 73
               

               Conread position:
               5-123
               

               Cow position:
               chr6:66375295-66375177 (view UCSC Genome Browser custom track)
               

               Alignm length:
               119
               

               Alignm identity:
               93
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               5-131
               

               Cow position:
               chr6:53090047-53090172 (view UCSC Genome Browser custom track)
               

               Alignm length:
               127
               

               Alignm identity:
               98
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               101, 0
               

               Conread position:
               5-136
               

               Cow position:
               chr6:54349732-54349864 (view UCSC Genome Browser custom track)
               

               Alignm length:
               134
               

               Alignm identity:
               103
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               110, 41
               

               Conread position:
               5-140
               

               Cow position:
               chr6:4702785-4702644 (view UCSC Genome Browser custom track)
               

               Alignm length:
               143
               

               Alignm identity:
               111
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               106, 28
               

               Conread position:
               5-140
               

               Cow position:
               chr6:61569670-61569803 (view UCSC Genome Browser custom track)
               

               Alignm length:
               137
               

               Alignm identity:
               109
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               120, 36
               

               Conread position:
               5-141
               

               Cow position:
               chr6:8209566-8209430 (view UCSC Genome Browser custom track)
               

               Alignm length:
               139
               

               Alignm identity:
               106
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               110, 5
               

               Conread position:
               5-154
               

               Cow position:
               chr6:48112235-48112382 (view UCSC Genome Browser custom track)
               

               Alignm length:
               150
               

               Alignm identity:
               116
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               30, 0
               

               Conread position:
               5-173
               

               Cow position:
               chr6:61524167-61523999 (view UCSC Genome Browser custom track)
               

               Alignm length:
               169
               

               Alignm identity:
               137
               

               Alignm E-value:
               8.00001e-41
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               5-178
               

               Cow position:
               chr6:26915369-26915538 (view UCSC Genome Browser custom track)
               

               Alignm length:
               174
               

               Alignm identity:
               134
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               39, 0
               

               Conread position:
               5-178
               

               Cow position:
               chr6:67643653-67643479 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               132
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               109, 127
               

               Conread position:
               5-184
               

               Cow position:
               chr6:36920936-36920759 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               145
               

               Alignm E-value:
               7e-39
               

               Alignm gaps (pig, cow):
               114, 28
               

               Conread position:
               5-192
               

               Cow position:
               chr6:34119315-34119140 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               138
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               37, 0
               

               Conread position:
               5-196
               

               Cow position:
               chr6:15305609-15305798 (view UCSC Genome Browser custom track)
               

               Alignm length:
               195
               

               Alignm identity:
               150
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               92, 39
               

               Conread position:
               5-196
               

               Cow position:
               chr6:54132853-54133038 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               151
               

               Alignm E-value:
               6e-38
               

               Alignm gaps (pig, cow):
               52, 0
               

               Conread position:
               5-202
               

               Cow position:
               chr6:37332146-37332344 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               145
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               53, 179
               

               Conread position:
               5-202
               

               Cow position:
               chr6:65871075-65871264 (view UCSC Genome Browser custom track)
               

               Alignm length:
               198
               

               Alignm identity:
               147
               

               Alignm E-value:
               9e-31
               

               Alignm gaps (pig, cow):
               61, 0
               

               Conread position:
               5-203
               

               Cow position:
               chr6:18904013-18903803 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               154
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               116, 11
               

               Conread position:
               5-203
               

               Cow position:
               chr6:21293458-21293264 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               159
               

               Alignm E-value:
               7e-40
               

               Alignm gaps (pig, cow):
               21, 65
               

               Conread position:
               5-203
               

               Cow position:
               chr6:23401954-23401761 (view UCSC Genome Browser custom track)
               

               Alignm length:
               199
               

               Alignm identity:
               141
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               44, 0
               

               Conread position:
               5-203
               

               Cow position:
               chr6:47520091-47520288 (view UCSC Genome Browser custom track)
               

               Alignm length:
               199
               

               Alignm identity:
               146
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               181, 0
               

               Conread position:
               5-204
               

               Cow position:
               chr6:49398582-49398394 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               150
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               110, 121
               

               Conread position:
               5-206
               

               Cow position:
               chr6:13687774-13687580 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               156
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               69, 0
               

               Conread position:
               5-206
               

               Cow position:
               chr6:30825728-30825540 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               141
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               39, 0
               

               Conread position:
               5-208
               

               Cow position:
               chr6:5820209-5820021 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               148
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               79, 0
               

               Conread position:
               5-208
               

               Cow position:
               chr6:18118011-18117810 (view UCSC Genome Browser custom track)
               

               Alignm length:
               206
               

               Alignm identity:
               158
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               189, 34
               

               Conread position:
               5-208
               

               Cow position:
               chr6:25615057-25614851 (view UCSC Genome Browser custom track)
               

               Alignm length:
               209
               

               Alignm identity:
               161
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               54, 115
               

               Conread position:
               5-208
               

               Cow position:
               chr6:46282966-46282753 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               159
               

               Alignm E-value:
               9e-32
               

               Alignm gaps (pig, cow):
               123, 191
               

               Conread position:
               5-210
               

               Cow position:
               chr6:32287677-32287872 (view UCSC Genome Browser custom track)
               

               Alignm length:
               207
               

               Alignm identity:
               149
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               89, 64
               

               Conread position:
               5-210
               

               Cow position:
               chr6:69334272-69334075 (view UCSC Genome Browser custom track)
               

               Alignm length:
               207
               

               Alignm identity:
               150
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               58, 45
               

               Conread position:
               5-212
               

               Cow position:
               chr6:6965359-6965152 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               158
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               112, 17
               

               Conread position:
               5-212
               

               Cow position:
               chr6:15937817-15937607 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               150
               

               Alignm E-value:
               7e-29
               

               Alignm gaps (pig, cow):
               128, 183
               

               Conread position:
               5-215
               

               Cow position:
               chr6:694113-693899 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               170
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               65, 135
               

               Conread position:
               5-215
               

               Cow position:
               chr6:10105941-10105738 (view UCSC Genome Browser custom track)
               

               Alignm length:
               211
               

               Alignm identity:
               174
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               136, 0
               

               Conread position:
               5-215
               

               Cow position:
               chr6:48097566-48097357 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               173
               

               Alignm E-value:
               4.2039e-45
               

               Alignm gaps (pig, cow):
               16, 137
               

               Conread position:
               5-220
               

               Cow position:
               chr6:21083503-21083290 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               165
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               111, 0
               

               Conread position:
               5-221
               

               Cow position:
               chr6:13040478-13040705 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               174
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               112, 75
               

               Conread position:
               5-221
               

               Cow position:
               chr6:17794726-17794502 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               158
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               121, 189
               

               Conread position:
               5-221
               

               Cow position:
               chr6:36537323-36537113 (view UCSC Genome Browser custom track)
               

               Alignm length:
               217
               

               Alignm identity:
               166
               

               Alignm E-value:
               8.00001e-41
               

               Alignm gaps (pig, cow):
               117, 0
               

               Conread position:
               5-221
               

               Cow position:
               chr6:51581214-51581003 (view UCSC Genome Browser custom track)
               

               Alignm length:
               217
               

               Alignm identity:
               153
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               39, 0
               

               Conread position:
               5-221
               

               Cow position:
               chr6:53546073-53546282 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               170
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               200, 116
               

               Conread position:
               5-221
               

               Cow position:
               chr6:63065864-63066089 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               173
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               57, 191
               

               Conread position:
               5-221
               

               Cow position:
               chr6:66839236-66839443 (view UCSC Genome Browser custom track)
               

               Alignm length:
               217
               

               Alignm identity:
               160
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               15, 0
               

               Conread position:
               5-222
               

               Cow position:
               chr6:66570478-66570679 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               158
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               200, 96
               

               Conread position:
               5-224
               

               Cow position:
               chr6:8966135-8966348 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               168
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               200, 128
               

               Conread position:
               5-224
               

               Cow position:
               chr6:19264461-19264245 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               168
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               217, 178
               

               Conread position:
               5-224
               

               Cow position:
               chr6:61269350-61269575 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               167
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               167, 119
               

               Conread position:
               5-225
               

               Cow position:
               chr6:40032229-40032438 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               157
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               199, 24
               

               Conread position:
               5-226
               

               Cow position:
               chr6:32121945-32122153 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               165
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               200, 89
               

               Conread position:
               5-228
               

               Cow position:
               chr6:45690572-45690362 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               176
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               132, 0
               

               Conread position:
               5-229
               

               Cow position:
               chr6:3351066-3351288 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               169
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               110, 139
               

               Conread position:
               5-229
               

               Cow position:
               chr6:23938098-23938314 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               164
               

               Alignm E-value:
               8e-30
               

               Alignm gaps (pig, cow):
               210, 111
               

               Conread position:
               5-229
               

               Cow position:
               chr6:57320546-57320340 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               168
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               44, 0
               

               Conread position:
               5-230
               

               Cow position:
               chr6:30023923-30024139 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               178
               

               Alignm E-value:
               4.2039e-45
               

               Alignm gaps (pig, cow):
               214, 118
               

               Conread position:
               5-230
               

               Cow position:
               chr6:52478373-52478149 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               181
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               199, 111
               

               Conread position:
               5-231
               

               Cow position:
               chr6:18955038-18954831 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               166
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               54, 0
               

               Conread position:
               5-232
               

               Cow position:
               chr6:31535531-31535307 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               161
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               200, 100
               

               Conread position:
               5-232
               

               Cow position:
               chr6:50504494-50504719 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               182
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               220, 136
               

               Conread position:
               5-252
               

               Cow position:
               chr6:5601740-5601984 (view UCSC Genome Browser custom track)
               

               Alignm length:
               252
               

               Alignm identity:
               179
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               156, 39
               

               Conread position:
               5-260
               

               Cow position:
               chr6:41226792-41226552 (view UCSC Genome Browser custom track)
               

               Alignm length:
               260
               

               Alignm identity:
               185
               

               Alignm E-value:
               7e-29
               

               Alignm gaps (pig, cow):
               207, 42
               

               Conread position:
               6-139
               

               Cow position:
               chr6:46571144-46571278 (view UCSC Genome Browser custom track)
               

               Alignm length:
               135
               

               Alignm identity:
               104
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               108, 0
               

               Conread position:
               6-203
               

               Cow position:
               chr6:36196249-36196436 (view UCSC Genome Browser custom track)
               

               Alignm length:
               198
               

               Alignm identity:
               146
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               89, 0
               

               Conread position:
               6-208
               

               Cow position:
               chr6:24514507-24514295 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               151
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               47, 191
               

               Conread position:
               6-219
               

               Cow position:
               chr6:15058415-15058625 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               149
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               204, 131
               

               Conread position:
               6-221
               

               Cow position:
               chr6:43906645-43906427 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               157
               

               Alignm E-value:
               7e-29
               

               Alignm gaps (pig, cow):
               8, 24
               

               Conread position:
               6-222
               

               Cow position:
               chr6:13367322-13367537 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               157
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               15, 119
               

               Conread position:
               6-230
               

               Cow position:
               chr6:1866770-1866991 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               171
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               158, 104
               

               Conread position:
               6-233
               

               Cow position:
               chr6:411175-410956 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               162
               

               Alignm E-value:
               8e-30
               

               Alignm gaps (pig, cow):
               20, 0
               

               Conread position:
               7-195
               

               Cow position:
               chr6:68816207-68816396 (view UCSC Genome Browser custom track)
               

               Alignm length:
               193
               

               Alignm identity:
               145
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               131, 42
               

               Conread position:
               7-203
               

               Cow position:
               chr6:22985815-22985628 (view UCSC Genome Browser custom track)
               

               Alignm length:
               197
               

               Alignm identity:
               145
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               90, 0
               

               Conread position:
               7-207
               

               Cow position:
               chr6:58725410-58725605 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               157
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               46, 0
               

               Conread position:
               7-208
               

               Cow position:
               chr6:49421748-49421557 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               148
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               106, 9
               

               Conread position:
               7-208
               

               Cow position:
               chr6:58173384-58173581 (view UCSC Genome Browser custom track)
               

               Alignm length:
               207
               

               Alignm identity:
               151
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               20, 112
               

               Conread position:
               7-210
               

               Cow position:
               chr6:26155188-26155386 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               157
               

               Alignm E-value:
               7e-39
               

               Alignm gaps (pig, cow):
               110, 0
               

               Conread position:
               7-224
               

               Cow position:
               chr6:60144158-60143945 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               169
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               117, 0
               

               Conread position:
               7-224
               

               Cow position:
               chr6:66978909-66979126 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               163
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               123, 41
               

               Conread position:
               7-225
               

               Cow position:
               chr6:41657307-41657520 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               167
               

               Alignm E-value:
               9.00054e-42
               

               Alignm gaps (pig, cow):
               126, 0
               

               Conread position:
               7-226
               

               Cow position:
               chr6:55044602-55044381 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               152
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               127, 88
               

               Conread position:
               7-228
               

               Cow position:
               chr6:15587557-15587326 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               164
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               14, 90
               

               Conread position:
               7-229
               

               Cow position:
               chr6:42034812-42035031 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               168
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               39, 47
               

               Conread position:
               9-138
               

               Cow position:
               chr6:28900368-28900497 (view UCSC Genome Browser custom track)
               

               Alignm length:
               130
               

               Alignm identity:
               109
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               9-197
               

               Cow position:
               chr6:4383521-4383702 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               140
               

               Alignm E-value:
               7e-29
               

               Alignm gaps (pig, cow):
               92, 0
               

               Conread position:
               9-203
               

               Cow position:
               chr6:21350991-21350797 (view UCSC Genome Browser custom track)
               

               Alignm length:
               197
               

               Alignm identity:
               156
               

               Alignm E-value:
               9.00054e-42
               

               Alignm gaps (pig, cow):
               106, 58
               

               Conread position:
               9-207
               

               Cow position:
               chr6:53711444-53711641 (view UCSC Genome Browser custom track)
               

               Alignm length:
               199
               

               Alignm identity:
               135
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               177, 0
               

               Conread position:
               9-208
               

               Cow position:
               chr6:66259771-66259976 (view UCSC Genome Browser custom track)
               

               Alignm length:
               207
               

               Alignm identity:
               144
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               95, 184
               

               Conread position:
               9-228
               

               Cow position:
               chr6:6614662-6614884 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               152
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               26, 76
               

               Conread position:
               9-231
               

               Cow position:
               chr6:33509831-33510048 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               155
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               90, 47
               

               Conread position:
               9-231
               

               Cow position:
               chr6:38610010-38610234 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               152
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               103, 182
               

               Conread position:
               10-205
               

               Cow position:
               chr6:29485125-29485319 (view UCSC Genome Browser custom track)
               

               Alignm length:
               197
               

               Alignm identity:
               158
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               37, 113
               

               Conread position:
               10-207
               

               Cow position:
               chr6:25773173-25772981 (view UCSC Genome Browser custom track)
               

               Alignm length:
               199
               

               Alignm identity:
               147
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               114, 34
               

               Conread position:
               11-208
               

               Cow position:
               chr6:46860123-46859932 (view UCSC Genome Browser custom track)
               

               Alignm length:
               198
               

               Alignm identity:
               150
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               90, 0
               

               Conread position:
               12-199
               

               Cow position:
               chr6:39093796-39093975 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               136
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               90, 0
               

               Conread position:
               12-221
               

               Cow position:
               chr6:36225153-36225362 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               147
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               98, 82
               

               Conread position:
               12-222
               

               Cow position:
               chr6:13742033-13742238 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               144
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               109, 60
               

               Conread position:
               12-226
               

               Cow position:
               chr6:2547300-2547516 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               168
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               169, 110
               

               Conread position:
               12-229
               

               Cow position:
               chr6:53792424-53792215 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               157
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               199, 99
               

               Conread position:
               12-242
               

               Cow position:
               chr6:19996659-19996891 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               164
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               78, 86
               

               Conread position:
               12-245
               

               Cow position:
               chr6:19563439-19563208 (view UCSC Genome Browser custom track)
               

               Alignm length:
               238
               

               Alignm identity:
               162
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               101, 178
               

               Conread position:
               14-208
               

               Cow position:
               chr6:33206783-33206968 (view UCSC Genome Browser custom track)
               

               Alignm length:
               195
               

               Alignm identity:
               137
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               81, 0
               

               Conread position:
               15-195
               

               Cow position:
               chr6:40682615-40682442 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               137
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               29, 0
               

               Conread position:
               15-206
               

               Cow position:
               chr6:41014931-41014737 (view UCSC Genome Browser custom track)
               

               Alignm length:
               197
               

               Alignm identity:
               138
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               57, 51
               

               Conread position:
               15-208
               

               Cow position:
               chr6:4468816-4469005 (view UCSC Genome Browser custom track)
               

               Alignm length:
               196
               

               Alignm identity:
               140
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               116, 80
               

               Conread position:
               15-208
               

               Cow position:
               chr6:62724603-62724797 (view UCSC Genome Browser custom track)
               

               Alignm length:
               197
               

               Alignm identity:
               139
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               94, 80
               

               Conread position:
               15-220
               

               Cow position:
               chr6:59620701-59620910 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               145
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               94, 81
               

               Conread position:
               15-221
               

               Cow position:
               chr6:8187142-8186937 (view UCSC Genome Browser custom track)
               

               Alignm length:
               209
               

               Alignm identity:
               149
               

               Alignm E-value:
               7e-29
               

               Alignm gaps (pig, cow):
               111, 173
               

               Conread position:
               15-224
               

               Cow position:
               chr6:67728423-67728637 (view UCSC Genome Browser custom track)
               

               Alignm length:
               217
               

               Alignm identity:
               150
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               98, 81
               

               Conread position:
               15-226
               

               Cow position:
               chr6:62437462-62437671 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               153
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               111, 173
               

               Conread position:
               15-228
               

               Cow position:
               chr6:8688799-8688591 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               143
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               106, 0
               

               Conread position:
               15-229
               

               Cow position:
               chr6:55548486-55548271 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               155
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               191, 141
               

               Conread position:
               15-231
               

               Cow position:
               chr6:40029944-40030160 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               149
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               81, 69
               

               Conread position:
               15-231
               

               Cow position:
               chr6:56061708-56061926 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               151
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               90, 81
               

               Conread position:
               15-231
               

               Cow position:
               chr6:64429148-64428930 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               151
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               98, 46
               

               Conread position:
               15-233
               

               Cow position:
               chr6:21399708-21399487 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               158
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               106, 81
               

               Conread position:
               16-220
               

               Cow position:
               chr6:63168715-63168511 (view UCSC Genome Browser custom track)
               

               Alignm length:
               209
               

               Alignm identity:
               154
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               104, 24
               

               Conread position:
               17-219
               

               Cow position:
               chr6:60186613-60186402 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               164
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               109, 204
               

               Conread position:
               17-229
               

               Cow position:
               chr6:35985087-35984875 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               158
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               109, 171
               

               Conread position:
               18-189
               

               Cow position:
               chr6:35842709-35842881 (view UCSC Genome Browser custom track)
               

               Alignm length:
               174
               

               Alignm identity:
               129
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               113, 77
               

               Conread position:
               18-207
               

               Cow position:
               chr6:54820882-54821072 (view UCSC Genome Browser custom track)
               

               Alignm length:
               193
               

               Alignm identity:
               135
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               81, 76
               

               Conread position:
               18-208
               

               Cow position:
               chr6:45160007-45159816 (view UCSC Genome Browser custom track)
               

               Alignm length:
               193
               

               Alignm identity:
               140
               

               Alignm E-value:
               8e-30
               

               Alignm gaps (pig, cow):
               108, 170
               

               Conread position:
               18-209
               

               Cow position:
               chr6:18080464-18080276 (view UCSC Genome Browser custom track)
               

               Alignm length:
               193
               

               Alignm identity:
               134
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               102, 24
               

               Conread position:
               18-225
               

               Cow position:
               chr6:54854300-54854506 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               146
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               6, 25
               

               Conread position:
               18-228
               

               Cow position:
               chr6:21004728-21004939 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               157
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               108, 6
               

               Conread position:
               19-222
               

               Cow position:
               chr6:14383727-14383929 (view UCSC Genome Browser custom track)
               

               Alignm length:
               205
               

               Alignm identity:
               154
               

               Alignm E-value:
               5e-37
               

               Alignm gaps (pig, cow):
               101, 67
               

               Conread position:
               20-203
               

               Cow position:
               chr6:57089256-57089438 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               126
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               166, 0
               

               Conread position:
               20-209
               

               Cow position:
               chr6:55404964-55405155 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               135
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               93, 74
               

               Conread position:
               20-230
               

               Cow position:
               chr6:44566477-44566688 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               148
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               119, 82
               

               Conread position:
               21-208
               

               Cow position:
               chr6:4323383-4323561 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               136
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               86, 0
               

               Conread position:
               22-221
               

               Cow position:
               chr6:58697577-58697375 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               141
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               102, 166
               

               Conread position:
               23-208
               

               Cow position:
               chr6:18447460-18447276 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               138
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               110, 6
               

               Conread position:
               23-208
               

               Cow position:
               chr6:59297108-59297284 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               137
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               72, 0
               

               Conread position:
               23-209
               

               Cow position:
               chr6:32006399-32006216 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               150
               

               Alignm E-value:
               9.00054e-42
               

               Alignm gaps (pig, cow):
               102, 0
               

               Conread position:
               23-229
               

               Cow position:
               chr6:49173502-49173288 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               149
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               103, 0
               

               Conread position:
               23-232
               

               Cow position:
               chr6:47782917-47783135 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               151
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               82, 168
               

               Conread position:
               23-232
               

               Cow position:
               chr6:51530132-51529929 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               154
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               103, 156
               

               Conread position:
               26-195
               

               Cow position:
               chr6:31228793-31228969 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               136
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               98, 19
               

               Conread position:
               26-196
               

               Cow position:
               chr6:14263832-14263662 (view UCSC Genome Browser custom track)
               

               Alignm length:
               174
               

               Alignm identity:
               128
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               34, 54
               

               Conread position:
               26-203
               

               Cow position:
               chr6:36938926-36939108 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               133
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               95, 166
               

               Conread position:
               26-208
               

               Cow position:
               chr6:43345383-43345201 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               127
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               98, 161
               

               Conread position:
               26-221
               

               Cow position:
               chr6:49685877-49686075 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               144
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               108, 18
               

               Conread position:
               26-223
               

               Cow position:
               chr6:28562110-28561913 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               148
               

               Alignm E-value:
               9e-31
               

               Alignm gaps (pig, cow):
               100, 68
               

               Conread position:
               26-228
               

               Cow position:
               chr6:57467655-57467857 (view UCSC Genome Browser custom track)
               

               Alignm length:
               205
               

               Alignm identity:
               144
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               108, 162
               

               Conread position:
               26-229
               

               Cow position:
               chr6:21052391-21052187 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               143
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               73, 68
               

               Conread position:
               26-229
               

               Cow position:
               chr6:33302453-33302655 (view UCSC Genome Browser custom track)
               

               Alignm length:
               205
               

               Alignm identity:
               141
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               96, 165
               

               Conread position:
               26-232
               

               Cow position:
               chr6:7539632-7539839 (view UCSC Genome Browser custom track)
               

               Alignm length:
               210
               

               Alignm identity:
               150
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               178, 46
               

               Conread position:
               29-208
               

               Cow position:
               chr6:34076223-34076402 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               133
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               54, 114
               

               Conread position:
               29-230
               

               Cow position:
               chr6:34423397-34423201 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               161
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               98, 0
               

               Conread position:
               29-242
               

               Cow position:
               chr6:39433068-39433260 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               155
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               57, 0
               

               Conread position:
               30-141
               

               Cow position:
               chr6:1684740-1684851 (view UCSC Genome Browser custom track)
               

               Alignm length:
               113
               

               Alignm identity:
               90
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               86, 74
               

               Conread position:
               32-196
               

               Cow position:
               chr6:61644794-61644629 (view UCSC Genome Browser custom track)
               

               Alignm length:
               167
               

               Alignm identity:
               118
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               98, 156
               

               Conread position:
               32-231
               

               Cow position:
               chr6:6850386-6850577 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               145
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               26, 139
               

               Conread position:
               33-208
               

               Cow position:
               chr6:19936504-19936329 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               133
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               93, 61
               

               Conread position:
               33-208
               

               Cow position:
               chr6:34463522-34463351 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               129
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               162, 91
               

               Conread position:
               33-208
               

               Cow position:
               chr6:53811648-53811825 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               129
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               100, 156
               

               Conread position:
               33-210
               

               Cow position:
               chr6:68272668-68272844 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               128
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               27, 9
               

               Conread position:
               33-212
               

               Cow position:
               chr6:18440412-18440235 (view UCSC Genome Browser custom track)
               

               Alignm length:
               182
               

               Alignm identity:
               129
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               93, 153
               

               Conread position:
               33-213
               

               Cow position:
               chr6:50577586-50577759 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               140
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               92, 0
               

               Conread position:
               33-214
               

               Cow position:
               chr6:33150226-33150049 (view UCSC Genome Browser custom track)
               

               Alignm length:
               182
               

               Alignm identity:
               129
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               52, 0
               

               Conread position:
               33-220
               

               Cow position:
               chr6:26408439-26408251 (view UCSC Genome Browser custom track)
               

               Alignm length:
               190
               

               Alignm identity:
               135
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               93, 155
               

               Conread position:
               33-221
               

               Cow position:
               chr6:35342116-35341935 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               152
               

               Alignm E-value:
               5e-37
               

               Alignm gaps (pig, cow):
               9, 64
               

               Conread position:
               33-226
               

               Cow position:
               chr6:37994274-37994458 (view UCSC Genome Browser custom track)
               

               Alignm length:
               195
               

               Alignm identity:
               150
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               26, 84
               

               Conread position:
               34-229
               

               Cow position:
               chr6:154536-154736 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               151
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               81, 147
               

               Conread position:
               35-208
               

               Cow position:
               chr6:43540182-43540023 (view UCSC Genome Browser custom track)
               

               Alignm length:
               174
               

               Alignm identity:
               132
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               66, 0
               

               Conread position:
               36-141
               

               Cow position:
               chr6:47676082-47676186 (view UCSC Genome Browser custom track)
               

               Alignm length:
               106
               

               Alignm identity:
               87
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               15, 0
               

               Conread position:
               36-199
               

               Cow position:
               chr6:48379545-48379381 (view UCSC Genome Browser custom track)
               

               Alignm length:
               166
               

               Alignm identity:
               122
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               88, 152
               

               Conread position:
               36-220
               

               Cow position:
               chr6:67187753-67187931 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               132
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               170, 88
               

               Conread position:
               36-227
               

               Cow position:
               chr6:5600792-5600612 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               138
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               88, 0
               

               Conread position:
               37-197
               

               Cow position:
               chr6:27219236-27219394 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               117
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               25, 100
               

               Conread position:
               37-203
               

               Cow position:
               chr6:32268818-32268653 (view UCSC Genome Browser custom track)
               

               Alignm length:
               167
               

               Alignm identity:
               119
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               148, 0
               

               Conread position:
               37-213
               

               Cow position:
               chr6:36570529-36570710 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               133
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               98, 155
               

               Conread position:
               37-217
               

               Cow position:
               chr6:63182358-63182533 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               133
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               87, 0
               

               Conread position:
               37-228
               

               Cow position:
               chr6:56986581-56986390 (view UCSC Genome Browser custom track)
               

               Alignm length:
               195
               

               Alignm identity:
               141
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               25, 20
               

               Conread position:
               37-231
               

               Cow position:
               chr6:10225586-10225390 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               154
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               92, 78
               

               Conread position:
               38-213
               

               Cow position:
               chr6:35743049-35743224 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               140
               

               Alignm E-value:
               9e-31
               

               Alignm gaps (pig, cow):
               77, 116
               

               Conread position:
               39-210
               

               Cow position:
               chr6:48278817-48278654 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               128
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               85, 0
               

               Conread position:
               39-231
               

               Cow position:
               chr6:36891723-36891907 (view UCSC Genome Browser custom track)
               

               Alignm length:
               196
               

               Alignm identity:
               141
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               90, 133
               

               Conread position:
               40-203
               

               Cow position:
               chr6:4699780-4699939 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               125
               

               Alignm E-value:
               7e-29
               

               Alignm gaps (pig, cow):
               87, 0
               

               Conread position:
               41-224
               

               Cow position:
               chr6:8726751-8726932 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               140
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               79, 94
               

               Conread position:
               44-196
               

               Cow position:
               chr6:2757861-2758009 (view UCSC Genome Browser custom track)
               

               Alignm length:
               153
               

               Alignm identity:
               121
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               91, 0
               

               Conread position:
               44-200
               

               Cow position:
               chr6:2014205-2014357 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               122
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               154, 35
               

               Conread position:
               44-202
               

               Cow position:
               chr6:19446326-19446486 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               124
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               14, 145
               

               Conread position:
               44-215
               

               Cow position:
               chr6:55646874-55646703 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               132
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               38, 84
               

               Conread position:
               45-208
               

               Cow position:
               chr6:7291393-7291550 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               131
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               77, 0
               

               Conread position:
               46-206
               

               Cow position:
               chr6:24903499-24903338 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               119
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               78, 142
               

               Conread position:
               46-206
               

               Cow position:
               chr6:38032936-38033095 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               124
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               140, 0
               

               Conread position:
               49-228
               

               Cow position:
               chr6:54406718-54406551 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               147
               

               Alignm E-value:
               5e-36
               

               Alignm gaps (pig, cow):
               73, 0
               

               Conread position:
               51-221
               

               Cow position:
               chr6:30502044-30501872 (view UCSC Genome Browser custom track)
               

               Alignm length:
               174
               

               Alignm identity:
               127
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               75, 43
               

               Conread position:
               51-221
               

               Cow position:
               chr6:62805726-62805897 (view UCSC Genome Browser custom track)
               

               Alignm length:
               174
               

               Alignm identity:
               129
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               62, 43
               

               Conread position:
               52-221
               

               Cow position:
               chr6:12928227-12928393 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               125
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               156, 42
               

               Conread position:
               52-233
               

               Cow position:
               chr6:8369506-8369685 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               134
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               74, 136
               

               Conread position:
               56-223
               

               Cow position:
               chr6:47673059-47672899 (view UCSC Genome Browser custom track)
               

               Alignm length:
               169
               

               Alignm identity:
               131
               

               Alignm E-value:
               7e-29
               

               Alignm gaps (pig, cow):
               117, 68
               

               Conread position:
               57-208
               

               Cow position:
               chr6:19025358-19025505 (view UCSC Genome Browser custom track)
               

               Alignm length:
               152
               

               Alignm identity:
               116
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               58, 0
               

               Conread position:
               59-225
               

               Cow position:
               chr6:21347059-21346898 (view UCSC Genome Browser custom track)
               

               Alignm length:
               167
               

               Alignm identity:
               135
               

               Alignm E-value:
               5e-36
               

               Alignm gaps (pig, cow):
               61, 0
               

               Conread position:
               59-228
               

               Cow position:
               chr6:31928728-31928898 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               127
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               67, 133
               

               Conread position:
               61-196
               

               Cow position:
               chr6:41733726-41733862 (view UCSC Genome Browser custom track)
               

               Alignm length:
               139
               

               Alignm identity:
               108
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               48, 33
               

               Conread position:
               61-208
               

               Cow position:
               chr6:12099593-12099451 (view UCSC Genome Browser custom track)
               

               Alignm length:
               148
               

               Alignm identity:
               109
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               61-208
               

               Cow position:
               chr6:66058614-66058470 (view UCSC Genome Browser custom track)
               

               Alignm length:
               148
               

               Alignm identity:
               119
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               61-219
               

               Cow position:
               chr6:5445760-5445916 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               120
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               60, 131
               

               Conread position:
               61-220
               

               Cow position:
               chr6:39414918-39415074 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               120
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               76, 33
               

               Conread position:
               61-221
               

               Cow position:
               chr6:4049059-4048898 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               121
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               38, 33
               

               Conread position:
               61-224
               

               Cow position:
               chr6:50451933-50452102 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               126
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               52, 33
               

               Conread position:
               61-227
               

               Cow position:
               chr6:15111748-15111578 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               130
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               42, 35
               

               Conread position:
               61-227
               

               Cow position:
               chr6:66947728-66947560 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               126
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               125, 75
               

               Conread position:
               61-229
               

               Cow position:
               chr6:28559631-28559798 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               124
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               49, 126
               

               Conread position:
               61-229
               

               Cow position:
               chr6:54828229-54828060 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               129
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               38, 33
               

               Conread position:
               61-231
               

               Cow position:
               chr6:26764734-26764559 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               128
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               38, 32
               

               Conread position:
               61-233
               

               Cow position:
               chr6:22850161-22849989 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               129
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               60, 33
               

               Conread position:
               62-185
               

               Cow position:
               chr6:53235558-53235436 (view UCSC Genome Browser custom track)
               

               Alignm length:
               124
               

               Alignm identity:
               100
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               62-208
               

               Cow position:
               chr6:23381574-23381427 (view UCSC Genome Browser custom track)
               

               Alignm length:
               149
               

               Alignm identity:
               111
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               63, 126
               

               Conread position:
               62-225
               

               Cow position:
               chr6:54889694-54889860 (view UCSC Genome Browser custom track)
               

               Alignm length:
               169
               

               Alignm identity:
               122
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               60, 32
               

               Conread position:
               63-208
               

               Cow position:
               chr6:63233611-63233756 (view UCSC Genome Browser custom track)
               

               Alignm length:
               148
               

               Alignm identity:
               114
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               47, 68
               

               Conread position:
               63-225
               

               Cow position:
               chr6:16137675-16137512 (view UCSC Genome Browser custom track)
               

               Alignm length:
               167
               

               Alignm identity:
               128
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               36, 31
               

               Conread position:
               64-221
               

               Cow position:
               chr6:43770802-43770649 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               119
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               143, 57
               

               Conread position:
               65-203
               

               Cow position:
               chr6:37827849-37827713 (view UCSC Genome Browser custom track)
               

               Alignm length:
               142
               

               Alignm identity:
               111
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               48, 12
               

               Conread position:
               65-231
               

               Cow position:
               chr6:55196310-55196476 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               130
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               48, 29
               

               Conread position:
               66-203
               

               Cow position:
               chr6:59759269-59759403 (view UCSC Genome Browser custom track)
               

               Alignm length:
               138
               

               Alignm identity:
               110
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               70, 0
               

               Conread position:
               66-208
               

               Cow position:
               chr6:15256923-15256782 (view UCSC Genome Browser custom track)
               

               Alignm length:
               146
               

               Alignm identity:
               111
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               33, 28
               

               Conread position:
               67-208
               

               Cow position:
               chr6:45633892-45633755 (view UCSC Genome Browser custom track)
               

               Alignm length:
               144
               

               Alignm identity:
               114
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               131, 24
               

               Conread position:
               68-223
               

               Cow position:
               chr6:30688411-30688256 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               120
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               76, 120
               

               Conread position:
               70-195
               

               Cow position:
               chr6:68602346-68602468 (view UCSC Genome Browser custom track)
               

               Alignm length:
               126
               

               Alignm identity:
               101
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               70-206
               

               Cow position:
               chr6:62849028-62849158 (view UCSC Genome Browser custom track)
               

               Alignm length:
               137
               

               Alignm identity:
               110
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               40, 0
               

               Conread position:
               70-231
               

               Cow position:
               chr6:11262849-11263004 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               124
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               135, 68
               

               Conread position:
               76-216
               

               Cow position:
               chr6:65831469-65831611 (view UCSC Genome Browser custom track)
               

               Alignm length:
               145
               

               Alignm identity:
               110
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               7, 11
               

               Conread position:
               77-204
               

               Cow position:
               chr6:36846506-36846383 (view UCSC Genome Browser custom track)
               

               Alignm length:
               128
               

               Alignm identity:
               104
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               9, 0
               

               Conread position:
               78-225
               

               Cow position:
               chr6:18776356-18776502 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               113
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               35, 24
               

               Conread position:
               86-203
               

               Cow position:
               chr6:60673953-60674065 (view UCSC Genome Browser custom track)
               

               Alignm length:
               118
               

               Alignm identity:
               96
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               34, 0
               

               Conread position:
               86-209
               

               Cow position:
               chr6:48661254-48661135 (view UCSC Genome Browser custom track)
               

               Alignm length:
               125
               

               Alignm identity:
               102
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               89, 37
               

               Conread position:
               91-247
               

               Cow position:
               chr6:9452612-9452452 (view UCSC Genome Browser custom track)
               

               Alignm length:
               166
               

               Alignm identity:
               131
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               6, 98
               

               Conread position:
               94-200
               

               Cow position:
               chr6:51862863-51862758 (view UCSC Genome Browser custom track)
               

               Alignm length:
               107
               

               Alignm identity:
               90
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               92, 0
               

               Conread position:
               95-240
               

               Cow position:
               chr6:51019276-51019425 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               112
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               38, 93
               

               Conread position:
               97-220
               

               Cow position:
               chr6:38615256-38615380 (view UCSC Genome Browser custom track)
               

               Alignm length:
               127
               

               Alignm identity:
               100
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               38, 81
               

               Conread position:
               103-227
               

               Cow position:
               chr6:16738748-16738874 (view UCSC Genome Browser custom track)
               

               Alignm length:
               128
               

               Alignm identity:
               102
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               23, 85
               

               Conread position:
               108-221
               

               Cow position:
               chr6:36592305-36592416 (view UCSC Genome Browser custom track)
               

               Alignm length:
               115
               

               Alignm identity:
               95
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               109, 28
               

               Conread position:
               111-233
               

               Cow position:
               chr6:592437-592317 (view UCSC Genome Browser custom track)
               

               Alignm length:
               125
               

               Alignm identity:
               103
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               17, 47
               

               Conread position:
               116-231
               

               Cow position:
               chr6:21200222-21200335 (view UCSC Genome Browser custom track)
               

               Alignm length:
               116
               

               Alignm identity:
               92
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               70, 0
               

               Conread position:
               123-221
               

               Cow position:
               chr6:35964327-35964230 (view UCSC Genome Browser custom track)
               

               Alignm length:
               99
               

               Alignm identity:
               82
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               124-229
               

               Cow position:
               chr6:54990515-54990414 (view UCSC Genome Browser custom track)
               

               Alignm length:
               106
               

               Alignm identity:
               89
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               55, 0
               

               Conread position:
               124-230
               

               Cow position:
               chr6:8666292-8666397 (view UCSC Genome Browser custom track)
               

               Alignm length:
               107
               

               Alignm identity:
               90
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               67, 0
               
Show alignments to all cow chromosomes.
Conread position:	1-114
Cow position:	chr6:32853222-32853334 (view UCSC Genome Browser custom track)
Alignm length:	114
Alignm identity:	91
Alignm E-value:	3e-22
Alignm gaps (pig, cow):	38, 0
Conread position:	1-123
Cow position:	chr6:28977006-28976884 (view UCSC Genome Browser custom track)
Alignm length:	123
Alignm identity:	100
Alignm E-value:	2e-27
Alignm gaps (pig, cow):	0, 0
Conread position:	1-124
Cow position:	chr6:43651786-43651909 (view UCSC Genome Browser custom track)
Alignm length:	124
Alignm identity:	98
Alignm E-value:	5e-25
Alignm gaps (pig, cow):	0, 0
Conread position:	1-136
Cow position:	chr6:54990967-54990832 (view UCSC Genome Browser custom track)
Alignm length:	136
Alignm identity:	107
Alignm E-value:	6e-28
Alignm gaps (pig, cow):	0, 0
Conread position:	1-137
Cow position:	chr6:51463599-51463464 (view UCSC Genome Browser custom track)
Alignm length:	138
Alignm identity:	106
Alignm E-value:	4e-23
Alignm gaps (pig, cow):	123, 80
Conread position:	1-138
Cow position:	chr6:58597472-58597335 (view UCSC Genome Browser custom track)
Alignm length:	139
Alignm identity:	109
Alignm E-value:	2e-26
Alignm gaps (pig, cow):	109, 123
Conread position:	1-140
Cow position:	chr6:47799327-47799468 (view UCSC Genome Browser custom track)
Alignm length:	142
Alignm identity:	106
Alignm E-value:	1e-22
Alignm gaps (pig, cow):	133, 0
Conread position:	1-141
Cow position:	chr6:1002229-1002089 (view UCSC Genome Browser custom track)
Alignm length:	141
Alignm identity:	108
Alignm E-value:	2e-26
Alignm gaps (pig, cow):	0, 0
Conread position:	1-169
Cow position:	chr6:2153565-2153395 (view UCSC Genome Browser custom track)
Alignm length:	172
Alignm identity:	121
Alignm E-value:	9e-21
Alignm gaps (pig, cow):	98, 93
Conread position:	1-173
Cow position:	chr6:21467230-21467060 (view UCSC Genome Browser custom track)
Alignm length:	175
Alignm identity:	124
Alignm E-value:	3e-21
Alignm gaps (pig, cow):	125, 31
Conread position:	1-179
Cow position:	chr6:61168789-61168976 (view UCSC Genome Browser custom track)
Alignm length:	188
Alignm identity:	147
Alignm E-value:	1e-34
Alignm gaps (pig, cow):	120, 0
Conread position:	1-184
Cow position:	chr6:8125360-8125545 (view UCSC Genome Browser custom track)
Alignm length:	186
Alignm identity:	127
Alignm E-value:	1e-21
Alignm gaps (pig, cow):	125, 0
Conread position:	1-187
Cow position:	chr6:1871164-1870978 (view UCSC Genome Browser custom track)
Alignm length:	187
Alignm identity:	140
Alignm E-value:	4e-35
Alignm gaps (pig, cow):	0, 0
Conread position:	1-194
Cow position:	chr6:24905661-24905847 (view UCSC Genome Browser custom track)
Alignm length:	194
Alignm identity:	143
Alignm E-value:	2e-29
Alignm gaps (pig, cow):	71, 0
Conread position:	1-195
Cow position:	chr6:2584976-2585167 (view UCSC Genome Browser custom track)
Alignm length:	195
Alignm identity:	136
Alignm E-value:	5e-25
Alignm gaps (pig, cow):	123, 0
Conread position:	1-196
Cow position:	chr6:60516860-60517065 (view UCSC Genome Browser custom track)
Alignm length:	208
Alignm identity:	160
Alignm E-value:	1e-35
Alignm gaps (pig, cow):	127, 50
Conread position:	1-198
Cow position:	chr6:19755048-19754849 (view UCSC Genome Browser custom track)
Alignm length:	203
Alignm identity:	143
Alignm E-value:	4e-23
Alignm gaps (pig, cow):	9, 42
Conread position:	1-201
Cow position:	chr6:38853625-38853424 (view UCSC Genome Browser custom track)
Alignm length:	203
Alignm identity:	159
Alignm E-value:	2.99878e-43
Alignm gaps (pig, cow):	114, 187
Conread position:	1-202
Cow position:	chr6:39358311-39358110 (view UCSC Genome Browser custom track)
Alignm length:	206
Alignm identity:	158
Alignm E-value:	2e-37
Alignm gaps (pig, cow):	19, 130
Conread position:	1-203
Cow position:	chr6:37149223-37149416 (view UCSC Genome Browser custom track)
Alignm length:	203
Alignm identity:	143
Alignm E-value:	4e-24
Alignm gaps (pig, cow):	134, 0