Cow genome map


           Conread name:
           rcki01_p15.y1
        

               Conread position:
               1-120
               

               Cow position:
               chr11:35647343-35647218 (view UCSC Genome Browser custom track)
               

               Alignm length:
               126
               

               Alignm identity:
               101
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               23, 0
               

               Conread position:
               1-127
               

               Cow position:
               chr11:1296440-1296309 (view UCSC Genome Browser custom track)
               

               Alignm length:
               133
               

               Alignm identity:
               104
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               23, 14
               

               Conread position:
               2-93
               

               Cow position:
               chr11:39075795-39075704 (view UCSC Genome Browser custom track)
               

               Alignm length:
               92
               

               Alignm identity:
               79
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               3-121
               

               Cow position:
               chr11:82115106-82115228 (view UCSC Genome Browser custom track)
               

               Alignm length:
               123
               

               Alignm identity:
               97
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               21, 0
               

               Conread position:
               7-119
               

               Cow position:
               chr11:63990513-63990625 (view UCSC Genome Browser custom track)
               

               Alignm length:
               114
               

               Alignm identity:
               90
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               72, 14
               

               Conread position:
               7-121
               

               Cow position:
               chr11:63987004-63987115 (view UCSC Genome Browser custom track)
               

               Alignm length:
               115
               

               Alignm identity:
               91
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               9-120
               

               Cow position:
               chr11:25651180-25651067 (view UCSC Genome Browser custom track)
               

               Alignm length:
               115
               

               Alignm identity:
               97
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               15, 91
               

               Conread position:
               10-126
               

               Cow position:
               chr11:42120458-42120569 (view UCSC Genome Browser custom track)
               

               Alignm length:
               117
               

               Alignm identity:
               99
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               11, 0
               

               Conread position:
               21-114
               

               Cow position:
               chr11:1608184-1608092 (view UCSC Genome Browser custom track)
               

               Alignm length:
               94
               

               Alignm identity:
               83
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               26, 0
               

               Conread position:
               21-126
               

               Cow position:
               chr11:65404462-65404567 (view UCSC Genome Browser custom track)
               

               Alignm length:
               106
               

               Alignm identity:
               85
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               21-130
               

               Cow position:
               chr11:69793227-69793116 (view UCSC Genome Browser custom track)
               

               Alignm length:
               112
               

               Alignm identity:
               94
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               101, 0
               

               Conread position:
               34-120
               

               Cow position:
               chr11:36164976-36165062 (view UCSC Genome Browser custom track)
               

               Alignm length:
               87
               

               Alignm identity:
               75
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               0, 0
               
Show alignments to all cow chromosomes.