• Home
• Research
• Resources
• Publications
• About
• People
• Events
• Jobs
• News
• Contact

Cow genome map

           
Conread name:
           
rcki29_p3.y1
        

               
Conread position:
               
67-250
               

               
Cow position:
               
chr1:78066321-78066514 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
22, 186
               

               
Conread position:
               
69-354
               

               
Cow position:
               
chr1:3608014-3607706 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
53, 0
               

               
Conread position:
               
71-352
               

               
Cow position:
               
chr1:68826706-68827007 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
23, 76
               

               
Conread position:
               
72-203
               

               
Cow position:
               
chr1:61742240-61742378 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
67, 0
               

               
Conread position:
               
72-222
               

               
Cow position:
               
chr1:3033992-3034149 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
46, 106
               

               
Conread position:
               
72-247
               

               
Cow position:
               
chr1:97144255-97144442 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
50, 172
               

               
Conread position:
               
72-352
               

               
Cow position:
               
chr1:38754133-38753818 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
50, 0
               

               
Conread position:
               
72-353
               

               
Cow position:
               
chr1:47886266-47886589 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
50, 20
               

               
Conread position:
               
73-226
               

               
Cow position:
               
chr1:99322354-99322516 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
15, 130
               

               
Conread position:
               
73-231
               

               
Cow position:
               
chr1:92590388-92590233 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
81, 66
               

               
Conread position:
               
73-250
               

               
Cow position:
               
chr1:55753004-55753197 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
44, 0
               

               
Conread position:
               
74-226
               

               
Cow position:
               
chr1:86512466-86512319 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
65, 0
               

               
Conread position:
               
75-226
               

               
Cow position:
               
chr1:34001256-34001093 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
47, 73
               

               
Conread position:
               
75-234
               

               
Cow position:
               
chr1:67674395-67674565 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
48, 72
               

               
Conread position:
               
75-235
               

               
Cow position:
               
chr1:99604978-99605150 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
75-248
               

               
Cow position:
               
chr1:83677111-83677303 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
75-248
               

               
Cow position:
               
chr1:100449979-100450151 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
43, 78
               

               
Conread position:
               
75-250
               

               
Cow position:
               
chr1:71295089-71295269 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
13, 173
               

               
Conread position:
               
75-255
               

               
Cow position:
               
chr1:97536492-97536308 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
13, 73
               

               
Conread position:
               
75-339
               

               
Cow position:
               
chr1:96558632-96558924 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
75-354
               

               
Cow position:
               
chr1:7971616-7971317 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
65, 8
               

               
Conread position:
               
75-355
               

               
Cow position:
               
chr1:42139053-42138762 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
13, 65
               

               
Conread position:
               
75-355
               

               
Cow position:
               
chr1:54258782-54258459 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
47, 145
               

               
Conread position:
               
76-227
               

               
Cow position:
               
chr1:81858689-81858855 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
46, 0
               

               
Conread position:
               
76-238
               

               
Cow position:
               
chr1:57638770-57638931 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
49, 72
               

               
Conread position:
               
76-248
               

               
Cow position:
               
chr1:22035820-22035636 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
46, 179
               

               
Conread position:
               
76-248
               

               
Cow position:
               
chr1:49297863-49297676 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
45, 182
               

               
Conread position:
               
76-253
               

               
Cow position:
               
chr1:71636116-71636305 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
49, 113
               

               
Conread position:
               
76-351
               

               
Cow position:
               
chr1:46030150-46030457 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
7, 0
               

               
Conread position:
               
76-353
               

               
Cow position:
               
chr1:23968852-23969140 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
18, 214
               

               
Conread position:
               
76-355
               

               
Cow position:
               
chr1:21130915-21131200 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
11, 81
               

               
Conread position:
               
76-355
               

               
Cow position:
               
chr1:42545587-42545891 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
11, 51
               

               
Conread position:
               
77-230
               

               
Cow position:
               
chr1:85339588-85339426 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
46, 0
               

               
Conread position:
               
77-247
               

               
Cow position:
               
chr1:81364475-81364286 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
10, 185
               

               
Conread position:
               
77-351
               

               
Cow position:
               
chr1:98583959-98583662 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
46, 282
               

               
Conread position:
               
77-355
               

               
Cow position:
               
chr1:99570287-99570570 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
67, 24
               

               
Conread position:
               
78-232
               

               
Cow position:
               
chr1:51968737-51968577 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
40, 0
               

               
Conread position:
               
78-240
               

               
Cow position:
               
chr1:37543591-37543754 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
50, 23
               

               
Conread position:
               
78-349
               

               
Cow position:
               
chr1:88338860-88338591 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
44, 55
               

               
Conread position:
               
78-355
               

               
Cow position:
               
chr1:31807066-31806773 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
46, 13
               

               
Conread position:
               
81-208
               

               
Cow position:
               
chr1:51626589-51626725 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
41, 0
               

               
Conread position:
               
81-224
               

               
Cow position:
               
chr1:40303755-40303599 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
41, 0
               

               
Conread position:
               
81-226
               

               
Cow position:
               
chr1:64421743-64421587 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
35, 0
               

               
Conread position:
               
81-227
               

               
Cow position:
               
chr1:42152282-42152433 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
41, 106
               

               
Conread position:
               
81-248
               

               
Cow position:
               
chr1:62322094-62321937 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
42, 0
               

               
Conread position:
               
81-251
               

               
Cow position:
               
chr1:6731386-6731202 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
36, 178
               

               
Conread position:
               
81-253
               

               
Cow position:
               
chr1:90840818-90840640 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
41, 139
               

               
Conread position:
               
81-355
               

               
Cow position:
               
chr1:35162612-35162304 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
44, 0
               

               
Conread position:
               
82-230
               

               
Cow position:
               
chr1:16060802-16060962 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
40, 0
               

               
Conread position:
               
82-235
               

               
Cow position:
               
chr1:43286535-43286383 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
42, 34
               

               
Conread position:
               
82-235
               

               
Cow position:
               
chr1:45576126-45575970 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
65, 0
               

               
Conread position:
               
82-253
               

               
Cow position:
               
chr1:85029142-85028973 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
70, 64
               

               
Conread position:
               
82-253
               

               
Cow position:
               
chr1:89509725-89509901 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
40, 14
               

               
Conread position:
               
82-351
               

               
Cow position:
               
chr1:86110539-86110832 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
36, 0
               

               
Conread position:
               
82-355
               

               
Cow position:
               
chr1:11172574-11172270 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
83-219
               

               
Cow position:
               
chr1:62181934-62182077 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
83-223
               

               
Cow position:
               
chr1:6759839-6759986 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
83-227
               

               
Cow position:
               
chr1:69250637-69250479 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
39, 104
               

               
Conread position:
               
83-229
               

               
Cow position:
               
chr1:37470696-37470544 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
40, 143
               

               
Conread position:
               
83-230
               

               
Cow position:
               
chr1:37321805-37321959 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
40, 149
               

               
Conread position:
               
83-231
               

               
Cow position:
               
chr1:242757-242598 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
83-231
               

               
Cow position:
               
chr1:76739709-76739869 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
83-232
               

               
Cow position:
               
chr1:75227120-75227280 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
83-236
               

               
Cow position:
               
chr1:771584-771744 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
83-237
               

               
Cow position:
               
chr1:66445161-66444998 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
35, 154
               

               
Conread position:
               
83-238
               

               
Cow position:
               
chr1:17056195-17056024 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
39, 105
               

               
Conread position:
               
83-238
               

               
Cow position:
               
chr1:41022621-41022453 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
83-240
               

               
Cow position:
               
chr1:40077995-40077826 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
83-240
               

               
Cow position:
               
chr1:87934075-87934239 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
83-242
               

               
Cow position:
               
chr1:22828368-22828540 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
83-248
               

               
Cow position:
               
chr1:20537407-20537230 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
39, 172
               

               
Conread position:
               
83-248
               

               
Cow position:
               
chr1:102648485-102648301 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
83-250
               

               
Cow position:
               
chr1:46004479-46004304 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
40, 167
               

               
Conread position:
               
83-250
               

               
Cow position:
               
chr1:71664689-71664875 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
83-253
               

               
Cow position:
               
chr1:25021873-25022055 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
39, 172
               

               
Conread position:
               
83-253
               

               
Cow position:
               
chr1:100552171-100551997 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
31, 164
               

               
Conread position:
               
83-296
               

               
Cow position:
               
chr1:84116-83888 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
83-328
               

               
Cow position:
               
chr1:95828930-95829194 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
35, 198
               

               
Conread position:
               
83-333
               

               
Cow position:
               
chr1:42868745-42869022 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
83-333
               

               
Cow position:
               
chr1:47790463-47790749 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
39, 132
               

               
Conread position:
               
83-349
               

               
Cow position:
               
chr1:72105605-72105312 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 0
               

               
Conread position:
               
83-351
               

               
Cow position:
               
chr1:97611468-97611753 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
56, 32
               

               
Conread position:
               
83-353
               

               
Cow position:
               
chr1:21787529-21787227 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
42, 56
               

               
Conread position:
               
83-353
               

               
Cow position:
               
chr1:22526079-22525773 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
38, 285
               

               
Conread position:
               
83-353
               

               
Cow position:
               
chr1:23186597-23186897 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
39, 147
               

               
Conread position:
               
83-353
               

               
Cow position:
               
chr1:31413799-31414064 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
32, 19
               

               
Conread position:
               
83-353
               

               
Cow position:
               
chr1:31934709-31934409 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
40, 0
               

               
Conread position:
               
83-353
               

               
Cow position:
               
chr1:54478521-54478221 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
39, 75
               

               
Conread position:
               
83-353
               

               
Cow position:
               
chr1:68863224-68862930 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
39, 82
               

               
Conread position:
               
83-353
               

               
Cow position:
               
chr1:87888595-87888297 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
46, 178
               

               
Conread position:
               
83-353
               

               
Cow position:
               
chr1:91065952-91066256 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
39, 145
               

               
Conread position:
               
83-353
               

               
Cow position:
               
chr1:100817746-100817452 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
30, 105
               

               
Conread position:
               
83-354
               

               
Cow position:
               
chr1:6166437-6166139 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
39, 247
               

               
Conread position:
               
83-354
               

               
Cow position:
               
chr1:34160033-34159733 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
39, 245
               

               
Conread position:
               
83-354
               

               
Cow position:
               
chr1:54156529-54156836 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
39, 253
               

               
Conread position:
               
83-354
               

               
Cow position:
               
chr1:69694802-69695096 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
57, 32
               

               
Conread position:
               
83-354
               

               
Cow position:
               
chr1:96365854-96365561 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
30, 96
               

               
Conread position:
               
83-355
               

               
Cow position:
               
chr1:3923599-3923900 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
42, 242
               

               
Conread position:
               
83-355
               

               
Cow position:
               
chr1:20667545-20667847 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
34, 99
               

               
Conread position:
               
83-355
               

               
Cow position:
               
chr1:22628451-22628743 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
33, 227
               

               
Conread position:
               
83-355
               

               
Cow position:
               
chr1:36998387-36998090 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
30, 255
               

               
Conread position:
               
83-355
               

               
Cow position:
               
chr1:52496973-52496678 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
65, 148
               

               
Conread position:
               
83-355
               

               
Cow position:
               
chr1:55230178-55229880 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
40, 221
               

               
Conread position:
               
83-355
               

               
Cow position:
               
chr1:55428748-55429059 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
39, 275
               

               
Conread position:
               
83-355
               

               
Cow position:
               
chr1:59519116-59518815 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
31, 95
               

               
Conread position:
               
83-355
               

               
Cow position:
               
chr1:69539890-69539592 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
8.99998e-41
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
83-355
               

               
Cow position:
               
chr1:72011617-72011914 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
83-355
               

               
Cow position:
               
chr1:72034723-72035030 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
34, 204
               

               
Conread position:
               
83-355
               

               
Cow position:
               
chr1:78794031-78794330 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
83-355
               

               
Cow position:
               
chr1:101788892-101789177 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
40, 199
               

               
Conread position:
               
84-230
               

               
Cow position:
               
chr1:51860360-51860519 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
84-247
               

               
Cow position:
               
chr1:64706673-64706519 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
84-247
               

               
Cow position:
               
chr1:101507554-101507384 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
38, 53
               

               
Conread position:
               
84-248
               

               
Cow position:
               
chr1:70044548-70044376 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
84-355
               

               
Cow position:
               
chr1:43855493-43855196 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
85-353
               

               
Cow position:
               
chr1:48443988-48444297 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
86-231
               

               
Cow position:
               
chr1:69411493-69411656 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
36, 0
               

               
Conread position:
               
87-231
               

               
Cow position:
               
chr1:74011090-74010953 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
87-235
               

               
Cow position:
               
chr1:39417930-39418074 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
93, 0
               

               
Conread position:
               
87-251
               

               
Cow position:
               
chr1:19031121-19031280 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
34, 57
               

               
Conread position:
               
87-251
               

               
Cow position:
               
chr1:84787461-84787292 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
38, 156
               

               
Conread position:
               
87-252
               

               
Cow position:
               
chr1:5636871-5637040 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
35, 66
               

               
Conread position:
               
87-253
               

               
Cow position:
               
chr1:63079202-63079030 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
28, 129
               

               
Conread position:
               
87-253
               

               
Cow position:
               
chr1:95835594-95835778 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
35, 174
               

               
Conread position:
               
87-272
               

               
Cow position:
               
chr1:2462572-2462367 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
67, 0
               

               
Conread position:
               
87-352
               

               
Cow position:
               
chr1:53370269-53369981 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
38, 28
               

               
Conread position:
               
87-353
               

               
Cow position:
               
chr1:9534343-9534069 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
26, 62
               

               
Conread position:
               
87-353
               

               
Cow position:
               
chr1:71045936-71045651 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
35, 132
               

               
Conread position:
               
87-353
               

               
Cow position:
               
chr1:75383164-75382895 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
35, 92
               

               
Conread position:
               
87-354
               

               
Cow position:
               
chr1:6304676-6304967 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
35, 0
               

               
Conread position:
               
87-354
               

               
Cow position:
               
chr1:28177181-28176905 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
78, 14
               

               
Conread position:
               
87-354
               

               
Cow position:
               
chr1:43340432-43340716 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
35, 144
               

               
Conread position:
               
87-355
               

               
Cow position:
               
chr1:6854118-6854384 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
31, 158
               

               
Conread position:
               
87-355
               

               
Cow position:
               
chr1:10778755-10778461 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
37, 238
               

               
Conread position:
               
87-355
               

               
Cow position:
               
chr1:15050521-15050245 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
59, 0
               

               
Conread position:
               
87-355
               

               
Cow position:
               
chr1:82880832-82880539 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
33, 66
               

               
Conread position:
               
87-355
               

               
Cow position:
               
chr1:90595376-90595658 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
36, 0
               

               
Conread position:
               
88-248
               

               
Cow position:
               
chr1:32014391-32014219 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
88-256
               

               
Cow position:
               
chr1:91796042-91796213 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
34, 89
               

               
Conread position:
               
88-355
               

               
Cow position:
               
chr1:96472615-96472340 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 57
               

               
Conread position:
               
89-230
               

               
Cow position:
               
chr1:64960247-64960392 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
31, 64
               

               
Conread position:
               
89-273
               

               
Cow position:
               
chr1:96362239-96362428 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
29, 0
               

               
Conread position:
               
89-326
               

               
Cow position:
               
chr1:46822149-46821916 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
64, 46
               

               
Conread position:
               
92-349
               

               
Cow position:
               
chr1:34686361-34686091 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
60, 16
               

               
Conread position:
               
93-253
               

               
Cow position:
               
chr1:61011370-61011201 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
29, 159
               

               
Conread position:
               
93-351
               

               
Cow position:
               
chr1:24406719-24406995 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
29, 53
               

               
Conread position:
               
94-248
               

               
Cow position:
               
chr1:81638733-81638573 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
28, 155
               

               
Conread position:
               
95-240
               

               
Cow position:
               
chr1:6941659-6941500 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
95-248
               

               
Cow position:
               
chr1:63905071-63905234 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
27, 158
               

               
Conread position:
               
95-355
               

               
Cow position:
               
chr1:38055313-38055580 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
22, 160
               

               
Conread position:
               
95-355
               

               
Cow position:
               
chr1:77720067-77720340 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
27, 83
               

               
Conread position:
               
97-284
               

               
Cow position:
               
chr1:52369990-52370190 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
25, 194
               

               
Conread position:
               
98-350
               

               
Cow position:
               
chr1:55819224-55818961 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
26, 56
               

               
Conread position:
               
98-352
               

               
Cow position:
               
chr1:43352481-43352761 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
27, 16
               

               
Conread position:
               
102-231
               

               
Cow position:
               
chr1:40181453-40181584 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
133
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
23, 19
               

               
Conread position:
               
103-354
               

               
Cow position:
               
chr1:93528879-93528594 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
110-227
               

               
Cow position:
               
chr1:45505761-45505882 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
123
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
5, 14
               

               
Conread position:
               
110-355
               

               
Cow position:
               
chr1:93554995-93554739 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
127, 9
               

               
Conread position:
               
113-248
               

               
Cow position:
               
chr1:19304729-19304597 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
136
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
100, 0
               

               
Conread position:
               
113-355
               

               
Cow position:
               
chr1:97939115-97938864 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
120, 24
               

               
Conread position:
               
116-240
               

               
Cow position:
               
chr1:31628005-31627880 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
128
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
36, 87
               

               
Conread position:
               
123-242
               

               
Cow position:
               
chr1:42404284-42404165 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
121
               

               
Alignm identity:
               
94
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
8, 15
               

               
Conread position:
               
123-355
               

               
Cow position:
               
chr1:6972676-6972424 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
125-355
               

               
Cow position:
               
chr1:102647148-102647377 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
129, 60
               

               
Conread position:
               
129-251
               

               
Cow position:
               
chr1:13752303-13752426 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
124
               

               
Alignm identity:
               
97
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
132-249
               

               
Cow position:
               
chr1:3955137-3955253 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
118
               

               
Alignm identity:
               
93
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
101, 0
               

               
Conread position:
               
133-231
               

               
Cow position:
               
chr1:81471493-81471396 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
99
               

               
Alignm identity:
               
84
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
66, 0
               

               
Conread position:
               
133-238
               

               
Cow position:
               
chr1:20864192-20864087 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
106
               

               
Alignm identity:
               
85
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
133-352
               

               
Cow position:
               
chr1:86061853-86062088 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
66, 5
               

               
Conread position:
               
133-352
               

               
Cow position:
               
chr1:86073735-86073493 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
96, 189
               

               
Conread position:
               
133-355
               

               
Cow position:
               
chr1:11729314-11729076 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
101, 0
               

               
Conread position:
               
135-354
               

               
Cow position:
               
chr1:8359776-8360002 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
73, 0
               

               
Conread position:
               
137-247
               

               
Cow position:
               
chr1:40530967-40531079 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
114
               

               
Alignm identity:
               
93
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
22, 99
               

               
Conread position:
               
137-247
               

               
Cow position:
               
chr1:45673889-45673778 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
112
               

               
Alignm identity:
               
92
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
100, 0
               

               
Conread position:
               
137-326
               

               
Cow position:
               
chr1:68672467-68672676 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
94, 0
               

               
Conread position:
               
137-334
               

               
Cow position:
               
chr1:8347258-8347039 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
96, 0
               

               
Conread position:
               
137-335
               

               
Cow position:
               
chr1:95153357-95153134 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
96, 0
               

               
Conread position:
               
137-350
               

               
Cow position:
               
chr1:1878155-1877929 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
95, 200
               

               
Conread position:
               
137-351
               

               
Cow position:
               
chr1:68763552-68763784 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
26, 181
               

               
Conread position:
               
137-355
               

               
Cow position:
               
chr1:24777858-24778091 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
22, 66
               

               
Conread position:
               
137-355
               

               
Cow position:
               
chr1:53623087-53622855 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
101, 25
               

               
Conread position:
               
137-355
               

               
Cow position:
               
chr1:76019563-76019797 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
95, 16
               

               
Conread position:
               
137-355
               

               
Cow position:
               
chr1:84238986-84239218 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
140-247
               

               
Cow position:
               
chr1:84768747-84768853 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
108
               

               
Alignm identity:
               
89
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
102, 0
               

               
Conread position:
               
141-272
               

               
Cow position:
               
chr1:102495011-102494874 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
89, 0
               

               
Conread position:
               
143-251
               

               
Cow position:
               
chr1:2972046-2971938 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
109
               

               
Alignm identity:
               
86
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
144-229
               

               
Cow position:
               
chr1:36018655-36018740 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
86
               

               
Alignm identity:
               
77
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
144-230
               

               
Cow position:
               
chr1:30194678-30194592 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
87
               

               
Alignm identity:
               
75
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
144-231
               

               
Cow position:
               
chr1:3666903-3666990 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
88
               

               
Alignm identity:
               
76
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
144-231
               

               
Cow position:
               
chr1:22461110-22461197 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
88
               

               
Alignm identity:
               
78
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
144-231
               

               
Cow position:
               
chr1:42360416-42360327 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
90
               

               
Alignm identity:
               
78
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
55, 0
               

               
Conread position:
               
144-231
               

               
Cow position:
               
chr1:53402909-53402822 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
88
               

               
Alignm identity:
               
79
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
144-231
               

               
Cow position:
               
chr1:79178756-79178669 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
88
               

               
Alignm identity:
               
78
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
144-231
               

               
Cow position:
               
chr1:100569284-100569197 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
88
               

               
Alignm identity:
               
76
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
144-238
               

               
Cow position:
               
chr1:86340340-86340434 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
95
               

               
Alignm identity:
               
82
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
144-240
               

               
Cow position:
               
chr1:23372986-23372891 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
97
               

               
Alignm identity:
               
82
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
144-240
               

               
Cow position:
               
chr1:96019356-96019260 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
97
               

               
Alignm identity:
               
80
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
144-247
               

               
Cow position:
               
chr1:42178873-42178771 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
104
               

               
Alignm identity:
               
90
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
100, 0
               

               
Conread position:
               
144-248
               

               
Cow position:
               
chr1:43148417-43148520 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
105
               

               
Alignm identity:
               
86
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
98, 0
               

               
Conread position:
               
144-248
               

               
Cow position:
               
chr1:57359590-57359487 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
105
               

               
Alignm identity:
               
86
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
98, 0
               

               
Conread position:
               
144-248
               

               
Cow position:
               
chr1:64458093-64457990 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
105
               

               
Alignm identity:
               
85
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
98, 0
               

               
Conread position:
               
144-248
               

               
Cow position:
               
chr1:67529183-67529080 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
105
               

               
Alignm identity:
               
85
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
98, 0
               

               
Conread position:
               
144-248
               

               
Cow position:
               
chr1:67539687-67539584 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
105
               

               
Alignm identity:
               
88
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
85, 0
               

               
Conread position:
               
144-248
               

               
Cow position:
               
chr1:95152999-95152896 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
105
               

               
Alignm identity:
               
87
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
98, 0
               

               
Conread position:
               
144-250
               

               
Cow position:
               
chr1:8353507-8353402 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
107
               

               
Alignm identity:
               
86
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
100, 0
               

               
Conread position:
               
144-253
               

               
Cow position:
               
chr1:45873942-45874051 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
110
               

               
Alignm identity:
               
89
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
144-253
               

               
Cow position:
               
chr1:46245613-46245722 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
111
               

               
Alignm identity:
               
91
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
97, 51
               

               
Conread position:
               
144-330
               

               
Cow position:
               
chr1:53640840-53640663 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
92, 88
               

               
Conread position:
               
144-348
               

               
Cow position:
               
chr1:38419151-38418934 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
89, 182
               

               
Conread position:
               
144-351
               

               
Cow position:
               
chr1:22824033-22823804 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
89, 179
               

               
Conread position:
               
144-351
               

               
Cow position:
               
chr1:72068706-72068940 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
144-351
               

               
Cow position:
               
chr1:98360276-98360499 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
74, 171
               

               
Conread position:
               
144-352
               

               
Cow position:
               
chr1:31794881-31795105 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
96, 203
               

               
Conread position:
               
144-353
               

               
Cow position:
               
chr1:874782-874547 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
89, 0
               

               
Conread position:
               
144-353
               

               
Cow position:
               
chr1:4032760-4032525 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
93, 0
               

               
Conread position:
               
144-353
               

               
Cow position:
               
chr1:72813744-72813511 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
89, 131
               

               
Conread position:
               
144-353
               

               
Cow position:
               
chr1:100400079-100400299 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
77, 31
               

               
Conread position:
               
144-354
               

               
Cow position:
               
chr1:32001191-32001425 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
144-355
               

               
Cow position:
               
chr1:3138041-3137824 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
89, 29
               

               
Conread position:
               
144-355
               

               
Cow position:
               
chr1:4180512-4180726 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
77, 55
               

               
Conread position:
               
144-355
               

               
Cow position:
               
chr1:7443104-7442878 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
88, 0
               

               
Conread position:
               
144-355
               

               
Cow position:
               
chr1:43311643-43311881 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
49, 194
               

               
Conread position:
               
144-355
               

               
Cow position:
               
chr1:43447721-43447937 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
109, 61
               

               
Conread position:
               
144-355
               

               
Cow position:
               
chr1:49839612-49839400 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
100, 73
               

               
Conread position:
               
144-355
               

               
Cow position:
               
chr1:51628383-51628600 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
45, 139
               

               
Conread position:
               
144-355
               

               
Cow position:
               
chr1:54199267-54199487 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
58, 53
               

               
Conread position:
               
144-355
               

               
Cow position:
               
chr1:57420608-57420832 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
89, 54
               

               
Conread position:
               
144-355
               

               
Cow position:
               
chr1:74928012-74927779 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
81, 207
               

               
Conread position:
               
144-355
               

               
Cow position:
               
chr1:79164966-79165190 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
43, 0
               

               
Conread position:
               
144-355
               

               
Cow position:
               
chr1:90868319-90868546 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
100, 27
               

               
Conread position:
               
144-355
               

               
Cow position:
               
chr1:90975959-90976190 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
16, 31
               

               
Conread position:
               
145-247
               

               
Cow position:
               
chr1:852297-852194 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
104
               

               
Alignm identity:
               
85
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
92, 0
               

               
Conread position:
               
145-247
               

               
Cow position:
               
chr1:94823265-94823366 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
103
               

               
Alignm identity:
               
86
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
97, 0
               

               
Conread position:
               
145-273
               

               
Cow position:
               
chr1:77685854-77685988 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
135
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
88, 0
               

               
Conread position:
               
145-317
               

               
Cow position:
               
chr1:26984136-26983961 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
109, 153
               

               
Conread position:
               
145-327
               

               
Cow position:
               
chr1:98467925-98467730 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
88, 169
               

               
Conread position:
               
146-247
               

               
Cow position:
               
chr1:92603145-92603045 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
102
               

               
Alignm identity:
               
86
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
96, 0
               

               
Conread position:
               
146-318
               

               
Cow position:
               
chr1:19515491-19515683 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
146-332
               

               
Cow position:
               
chr1:73457972-73458176 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
40, 0
               

               
Conread position:
               
146-354
               

               
Cow position:
               
chr1:29481504-29481728 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
43, 156
               

               
Conread position:
               
146-355
               

               
Cow position:
               
chr1:33720227-33720014 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
131, 95
               

               
Conread position:
               
148-355
               

               
Cow position:
               
chr1:23633806-23634009 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
85, 129
               

               
Conread position:
               
148-355
               

               
Cow position:
               
chr1:68245196-68245412 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
93, 67
               

               
Conread position:
               
149-248
               

               
Cow position:
               
chr1:46100717-46100815 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
100
               

               
Alignm identity:
               
88
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
93, 0
               

               
Conread position:
               
149-250
               

               
Cow position:
               
chr1:52506049-52506151 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
103
               

               
Alignm identity:
               
84
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
92, 0
               

               
Conread position:
               
149-253
               

               
Cow position:
               
chr1:11489036-11489139 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
105
               

               
Alignm identity:
               
86
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
101, 0
               

               
Conread position:
               
149-253
               

               
Cow position:
               
chr1:31630164-31630267 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
105
               

               
Alignm identity:
               
88
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
93, 0
               

               
Conread position:
               
149-321
               

               
Cow position:
               
chr1:186158-186348 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
57, 0
               

               
Conread position:
               
149-326
               

               
Cow position:
               
chr1:98576170-98575969 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
84, 0
               

               
Conread position:
               
149-345
               

               
Cow position:
               
chr1:30417925-30418133 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
88, 162
               

               
Conread position:
               
149-348
               

               
Cow position:
               
chr1:65103738-65103521 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
84, 50
               

               
Conread position:
               
149-352
               

               
Cow position:
               
chr1:21836054-21835843 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
91, 140
               

               
Conread position:
               
149-353
               

               
Cow position:
               
chr1:55357172-55357388 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
84, 0
               

               
Conread position:
               
149-354
               

               
Cow position:
               
chr1:69264931-69264712 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
88, 180
               

               
Conread position:
               
149-354
               

               
Cow position:
               
chr1:80422395-80422176 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
90, 0
               

               
Conread position:
               
149-354
               

               
Cow position:
               
chr1:98594688-98594474 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
80, 188
               

               
Conread position:
               
149-354
               

               
Cow position:
               
chr1:101280615-101280820 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
87, 107
               

               
Conread position:
               
149-355
               

               
Cow position:
               
chr1:8349201-8349420 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
26, 177
               

               
Conread position:
               
149-355
               

               
Cow position:
               
chr1:41252287-41252506 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
80, 184
               

               
Conread position:
               
149-355
               

               
Cow position:
               
chr1:80336125-80336344 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
10, 190
               

               
Conread position:
               
149-355
               

               
Cow position:
               
chr1:91811902-91811682 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
11, 192
               

               
Conread position:
               
149-355
               

               
Cow position:
               
chr1:95057168-95056950 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
64, 162
               

               
Conread position:
               
149-355
               

               
Cow position:
               
chr1:101822392-101822606 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
84, 24
               

               
Conread position:
               
150-353
               

               
Cow position:
               
chr1:46939762-46939959 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
21, 95
               

               
Conread position:
               
150-355
               

               
Cow position:
               
chr1:731851-732039 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
94, 0
               

               
Conread position:
               
150-355
               

               
Cow position:
               
chr1:34771381-34771609 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
80, 181
               

               
Conread position:
               
150-355
               

               
Cow position:
               
chr1:91874795-91875014 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
68, 0
               

               
Conread position:
               
151-250
               

               
Cow position:
               
chr1:3914798-3914895 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
100
               

               
Alignm identity:
               
84
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
86, 0
               

               
Conread position:
               
151-353
               

               
Cow position:
               
chr1:49796113-49795901 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
82, 181
               

               
Conread position:
               
153-353
               

               
Cow position:
               
chr1:75933385-75933169 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
80, 0
               

               
Conread position:
               
153-354
               

               
Cow position:
               
chr1:100706245-100706029 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
76, 0
               

               
Conread position:
               
153-355
               

               
Cow position:
               
chr1:6826180-6826394 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
77, 169
               

               
Conread position:
               
153-355
               

               
Cow position:
               
chr1:65909629-65909422 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
8.99998e-41
               

               
Alignm gaps (pig, cow):
               
91, 20
               

               
Conread position:
               
153-355
               

               
Cow position:
               
chr1:84240999-84240787 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
53, 37
               

               
Conread position:
               
154-354
               

               
Cow position:
               
chr1:76470761-76470551 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
72, 0
               

               
Conread position:
               
154-355
               

               
Cow position:
               
chr1:85549960-85550183 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
84, 0
               

               
Conread position:
               
155-352
               

               
Cow position:
               
chr1:30047486-30047696 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
87, 55
               

               
Conread position:
               
156-353
               

               
Cow position:
               
chr1:43822515-43822297 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
73, 0
               

               
Conread position:
               
157-354
               

               
Cow position:
               
chr1:95215075-95215285 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
74, 136
               

               
Conread position:
               
157-355
               

               
Cow position:
               
chr1:100421935-100421727 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
60, 134
               

               
Conread position:
               
158-355
               

               
Cow position:
               
chr1:61542805-61543023 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
69, 0
               

               
Conread position:
               
162-353
               

               
Cow position:
               
chr1:26702097-26702310 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
13, 9
               

               
Conread position:
               
162-354
               

               
Cow position:
               
chr1:63434696-63434910 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
71, 0
               

               
Conread position:
               
162-354
               

               
Cow position:
               
chr1:77683462-77683253 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
71, 0
               

               
Conread position:
               
166-328
               

               
Cow position:
               
chr1:25194792-25194948 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
8, 79
               

               
Conread position:
               
167-355
               

               
Cow position:
               
chr1:45288766-45288977 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
62, 0
               

               
Conread position:
               
181-355
               

               
Cow position:
               
chr1:4374246-4374445 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
52, 143
               

               
Conread position:
               
183-355
               

               
Cow position:
               
chr1:85597027-85596836 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
50, 0
               

               
Conread position:
               
217-355
               

               
Cow position:
               
chr1:83593768-83593908 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
18, 6
               

               
Conread position:
               
230-355
               

               
Cow position:
               
chr1:81471160-81471027 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
135
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
24, 30
               

               
Conread position:
               
232-354
               

               
Cow position:
               
chr1:68951652-68951523 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
130
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
232-355
               

               
Cow position:
               
chr1:22448556-22448692 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
232-355
               

               
Cow position:
               
chr1:24445602-24445733 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
132
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
232-355
               

               
Cow position:
               
chr1:38544439-38544568 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
131
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
26, 92
               

               
Conread position:
               
232-355
               

               
Cow position:
               
chr1:42398166-42398299 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
134
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
232-355
               

               
Cow position:
               
chr1:53425201-53425070 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
132
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
232-355
               

               
Cow position:
               
chr1:57395911-57396035 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
125
               

               
Alignm identity:
               
99
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
232-355
               

               
Cow position:
               
chr1:101946689-101946815 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
127
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
233-352
               

               
Cow position:
               
chr1:43703433-43703305 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
129
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
240-353
               

               
Cow position:
               
chr1:63905457-63905575 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
119
               

               
Alignm identity:
               
95
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
240-354
               

               
Cow position:
               
chr1:6941477-6941359 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
119
               

               
Alignm identity:
               
98
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
242-354
               

               
Cow position:
               
chr1:6958888-6958772 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
117
               

               
Alignm identity:
               
96
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
242-355
               

               
Cow position:
               
chr1:71818446-71818563 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
118
               

               
Alignm identity:
               
96
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
242-355
               

               
Cow position:
               
chr1:100770738-100770854 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
117
               

               
Alignm identity:
               
94
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
248-354
               

               
Cow position:
               
chr1:15311872-15311766 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
109
               

               
Alignm identity:
               
91
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
6, 13
               

               
Conread position:
               
273-355
               

               
Cow position:
               
chr1:87095253-87095335 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
83
               

               
Alignm identity:
               
73
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
276-353
               

               
Cow position:
               
chr1:40531139-40531216 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
78
               

               
Alignm identity:
               
71
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               
Show alignments to all cow chromosomes.