Cow genome map
| Conread name: | rcki29_p3.y1 |
| Conread position: | 70-347 |
| Cow position: | chr12:29674981-29675279 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 215 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 22, 48 |
| Conread position: | 71-353 |
| Cow position: | chr12:19714886-19715189 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 225 |
| Alignm E-value: | 6e-35 |
| Alignm gaps (pig, cow): | 11, 54 |
| Conread position: | 73-248 |
| Cow position: | chr12:48579006-48578822 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 140 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 54, 101 |
| Conread position: | 75-240 |
| Cow position: | chr12:3039890-3039717 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 132 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 39, 51 |
| Conread position: | 75-247 |
| Cow position: | chr12:4954990-4954805 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 141 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 47, 123 |
| Conread position: | 75-327 |
| Cow position: | chr12:18123835-18123558 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 191 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 54, 0 |
| Conread position: | 75-355 |
| Cow position: | chr12:25804976-25805260 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 193 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 46, 197 |
| Conread position: | 76-230 |
| Cow position: | chr12:22048093-22047919 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 135 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 76-250 |
| Cow position: | chr12:17879137-17879322 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 137 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 41, 144 |
| Conread position: | 77-235 |
| Cow position: | chr12:39465732-39465572 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 119 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 47, 76 |
| Conread position: | 78-351 |
| Cow position: | chr12:27563213-27563523 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 237 |
| Alignm E-value: | 4.99983e-42 |
| Alignm gaps (pig, cow): | 44, 259 |
| Conread position: | 78-355 |
| Cow position: | chr12:24023645-24023945 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 213 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 44, 218 |
| Conread position: | 81-238 |
| Cow position: | chr12:25417415-25417580 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 123 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 37, 117 |
| Conread position: | 81-242 |
| Cow position: | chr12:41684668-41684493 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 133 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 7, 0 |
| Conread position: | 81-307 |
| Cow position: | chr12:42286127-42285866 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 190 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 41, 0 |
| Conread position: | 81-346 |
| Cow position: | chr12:39339873-39339601 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 207 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 41, 165 |
| Conread position: | 81-355 |
| Cow position: | chr12:15050462-15050767 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 227 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 37, 124 |
| Conread position: | 82-231 |
| Cow position: | chr12:24391464-24391316 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 117 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 70, 26 |
| Conread position: | 82-248 |
| Cow position: | chr12:26749788-26749971 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 142 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 33, 178 |
| Conread position: | 83-208 |
| Cow position: | chr12:27332009-27332135 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 102 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 35, 42 |
| Conread position: | 83-227 |
| Cow position: | chr12:9130064-9129910 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 121 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 33, 135 |
| Conread position: | 83-227 |
| Cow position: | chr12:14396630-14396784 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 121 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 35, 0 |
| Conread position: | 83-229 |
| Cow position: | chr12:44693360-44693214 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 110 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 57, 85 |
| Conread position: | 83-229 |
| Cow position: | chr12:44822443-44822292 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 118 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 39, 130 |
| Conread position: | 83-231 |
| Cow position: | chr12:14223144-14222978 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 131 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 34, 0 |
| Conread position: | 83-231 |
| Cow position: | chr12:35469290-35469450 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 124 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 39, 96 |
| Conread position: | 83-240 |
| Cow position: | chr12:34465857-34466016 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 123 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 34, 70 |
| Conread position: | 83-247 |
| Cow position: | chr12:17250665-17250493 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 131 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 38, 96 |
| Conread position: | 83-247 |
| Cow position: | chr12:42951530-42951706 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 138 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 40, 167 |
| Conread position: | 83-252 |
| Cow position: | chr12:24397004-24397188 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 141 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 35, 141 |
| Conread position: | 83-325 |
| Cow position: | chr12:18103456-18103731 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 206 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 39, 0 |
| Conread position: | 83-352 |
| Cow position: | chr12:25989054-25989340 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 205 |
| Alignm E-value: | 9e-28 |
| Alignm gaps (pig, cow): | 32, 111 |
| Conread position: | 83-353 |
| Cow position: | chr12:4769080-4768779 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 214 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 39, 0 |
| Conread position: | 83-353 |
| Cow position: | chr12:9229355-9229630 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 202 |
| Alignm E-value: | 9e-38 |
| Alignm gaps (pig, cow): | 150, 192 |
| Conread position: | 83-353 |
| Cow position: | chr12:34161564-34161268 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 216 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 39, 27 |
| Conread position: | 83-354 |
| Cow position: | chr12:15938109-15938415 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 223 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 35, 137 |
| Conread position: | 83-354 |
| Cow position: | chr12:20479183-20479472 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 220 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 64, 34 |
| Conread position: | 83-354 |
| Cow position: | chr12:38774084-38774388 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 220 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 39, 211 |
| Conread position: | 83-355 |
| Cow position: | chr12:4720105-4719796 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 230 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 39, 253 |
| Conread position: | 83-355 |
| Cow position: | chr12:26868655-26868944 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 211 |
| Alignm E-value: | 7e-36 |
| Alignm gaps (pig, cow): | 69, 206 |
| Conread position: | 83-355 |
| Cow position: | chr12:30210631-30210332 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 224 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 40, 72 |
| Conread position: | 85-247 |
| Cow position: | chr12:6666720-6666552 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 133 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 37, 159 |
| Conread position: | 85-248 |
| Cow position: | chr12:43855049-43854875 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 137 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 38, 161 |
| Conread position: | 87-238 |
| Cow position: | chr12:22859607-22859453 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 114 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 40, 0 |
| Conread position: | 87-247 |
| Cow position: | chr12:45782380-45782208 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 133 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 35, 168 |
| Conread position: | 87-248 |
| Cow position: | chr12:11057023-11056854 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 124 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 87-253 |
| Cow position: | chr12:40157871-40158046 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 140 |
| Alignm E-value: | 9e-28 |
| Alignm gaps (pig, cow): | 35, 133 |
| Conread position: | 87-334 |
| Cow position: | chr12:37008553-37008833 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 200 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 35, 0 |
| Conread position: | 87-351 |
| Cow position: | chr12:11587926-11587627 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 225 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 30, 0 |
| Conread position: | 87-354 |
| Cow position: | chr12:3623848-3623545 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 223 |
| Alignm E-value: | 8e-37 |
| Alignm gaps (pig, cow): | 35, 0 |
| Conread position: | 87-355 |
| Cow position: | chr12:24639785-24639504 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 205 |
| Alignm E-value: | 7e-36 |
| Alignm gaps (pig, cow): | 35, 85 |
| Conread position: | 89-249 |
| Cow position: | chr12:24116218-24116385 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 125 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 28, 89 |
| Conread position: | 89-353 |
| Cow position: | chr12:48415365-48415668 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 215 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 33, 255 |
| Conread position: | 93-248 |
| Cow position: | chr12:44542414-44542247 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 126 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 32, 162 |
| Conread position: | 95-240 |
| Cow position: | chr12:3616132-3615985 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 113 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 27, 60 |
| Conread position: | 95-355 |
| Cow position: | chr12:30194842-30194557 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 207 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 98-353 |
| Cow position: | chr12:31429446-31429718 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 199 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 36, 28 |
| Conread position: | 108-271 |
| Cow position: | chr12:22469631-22469469 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 121 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 145, 22 |
| Conread position: | 112-353 |
| Cow position: | chr12:41581225-41580970 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 188 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 51, 16 |
| Conread position: | 115-259 |
| Cow position: | chr12:3879868-3880010 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 108 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 19, 34 |
| Conread position: | 119-240 |
| Cow position: | chr12:26147062-26147182 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 97 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 5, 0 |
| Conread position: | 121-354 |
| Cow position: | chr12:29779808-29780048 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 185 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 112, 24 |
| Conread position: | 122-355 |
| Cow position: | chr12:2804969-2805194 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 162 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 97, 43 |
| Conread position: | 123-353 |
| Cow position: | chr12:32051612-32051365 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 186 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 106, 14 |
| Conread position: | 123-355 |
| Cow position: | chr12:8943118-8943368 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 195 |
| Alignm E-value: | 7e-36 |
| Alignm gaps (pig, cow): | 32, 7 |
| Conread position: | 130-355 |
| Cow position: | chr12:27562746-27562979 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 178 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 107, 20 |
| Conread position: | 133-355 |
| Cow position: | chr12:3599665-3599902 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 181 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 40, 47 |
| Conread position: | 137-248 |
| Cow position: | chr12:7920333-7920223 (view UCSC Genome Browser custom track) |
| Alignm length: | 112 |
| Alignm identity: | 92 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 105, 0 |
| Conread position: | 137-248 |
| Cow position: | chr12:42143250-42143141 (view UCSC Genome Browser custom track) |
| Alignm length: | 112 |
| Alignm identity: | 90 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 97, 0 |
| Conread position: | 137-248 |
| Cow position: | chr12:42181040-42181148 (view UCSC Genome Browser custom track) |
| Alignm length: | 112 |
| Alignm identity: | 90 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 11, 0 |
| Conread position: | 137-307 |
| Cow position: | chr12:21780252-21780062 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 143 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 96, 16 |
| Conread position: | 137-321 |
| Cow position: | chr12:31269244-31269034 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 158 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 96, 24 |
| Conread position: | 137-328 |
| Cow position: | chr12:24222430-24222641 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 156 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 96, 182 |
| Conread position: | 137-350 |
| Cow position: | chr12:4866908-4866677 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 165 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 96, 0 |
| Conread position: | 137-355 |
| Cow position: | chr12:7000514-7000754 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 178 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 91, 50 |
| Conread position: | 137-355 |
| Cow position: | chr12:25321005-25320772 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 173 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 71, 62 |
| Conread position: | 137-355 |
| Cow position: | chr12:29995374-29995610 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 175 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 93, 22 |
| Conread position: | 137-355 |
| Cow position: | chr12:42698155-42698373 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 163 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 112, 143 |
| Conread position: | 143-349 |
| Cow position: | chr12:7110282-7110056 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 173 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 88, 0 |
| Conread position: | 144-231 |
| Cow position: | chr12:39149968-39150055 (view UCSC Genome Browser custom track) |
| Alignm length: | 88 |
| Alignm identity: | 77 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 144-247 |
| Cow position: | chr12:12699557-12699661 (view UCSC Genome Browser custom track) |
| Alignm length: | 105 |
| Alignm identity: | 88 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 93, 0 |
| Conread position: | 144-248 |
| Cow position: | chr12:7457461-7457564 (view UCSC Genome Browser custom track) |
| Alignm length: | 105 |
| Alignm identity: | 88 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 98, 0 |
| Conread position: | 144-327 |
| Cow position: | chr12:31959963-31959765 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 150 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 85, 0 |
| Conread position: | 144-330 |
| Cow position: | chr12:4093688-4093874 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 134 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 62, 135 |
| Conread position: | 144-333 |
| Cow position: | chr12:25193122-25192924 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 144 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 62, 176 |
| Conread position: | 144-338 |
| Cow position: | chr12:39382682-39382478 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 142 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 49, 0 |
| Conread position: | 144-339 |
| Cow position: | chr12:36012546-36012749 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 155 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 109, 81 |
| Conread position: | 144-347 |
| Cow position: | chr12:22485890-22485677 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 157 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 80, 185 |
| Conread position: | 144-349 |
| Cow position: | chr12:15163223-15163006 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 171 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 89, 148 |
| Conread position: | 144-353 |
| Cow position: | chr12:3995015-3994808 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 142 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 100, 0 |
| Conread position: | 144-353 |
| Cow position: | chr12:23916926-23916695 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 186 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 89, 0 |
| Conread position: | 144-354 |
| Cow position: | chr12:11109838-11109618 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 164 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 97, 218 |
| Conread position: | 144-355 |
| Cow position: | chr12:5459333-5459116 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 152 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 89, 178 |
| Conread position: | 144-355 |
| Cow position: | chr12:7978121-7977893 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 179 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 89, 190 |
| Conread position: | 144-355 |
| Cow position: | chr12:13988453-13988221 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 176 |
| Alignm E-value: | 6e-35 |
| Alignm gaps (pig, cow): | 89, 0 |
| Conread position: | 144-355 |
| Cow position: | chr12:15173907-15173675 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 180 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 89, 176 |
| Conread position: | 144-355 |
| Cow position: | chr12:26782955-26782738 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 164 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 89, 174 |
| Conread position: | 144-355 |
| Cow position: | chr12:30661868-30662097 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 181 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 89, 14 |
| Conread position: | 144-355 |
| Cow position: | chr12:37993648-37993872 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 175 |
| Alignm E-value: | 8e-37 |
| Alignm gaps (pig, cow): | 83, 147 |
| Conread position: | 144-355 |
| Cow position: | chr12:41159671-41159445 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 171 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 86, 174 |
| Conread position: | 144-355 |
| Cow position: | chr12:42254750-42254517 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 188 |
| Alignm E-value: | 4.99983e-42 |
| Alignm gaps (pig, cow): | 89, 14 |
| Conread position: | 144-355 |
| Cow position: | chr12:42967078-42966848 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 188 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 87, 20 |
| Conread position: | 144-355 |
| Cow position: | chr12:44595726-44595961 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 170 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 31, 27 |
| Conread position: | 144-355 |
| Cow position: | chr12:45014765-45014561 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 154 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 31, 9 |
| Conread position: | 145-271 |
| Cow position: | chr12:10834050-10834183 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 105 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 72, 0 |
| Conread position: | 145-355 |
| Cow position: | chr12:25177515-25177733 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 150 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 88, 0 |
| Conread position: | 146-231 |
| Cow position: | chr12:22323192-22323277 (view UCSC Genome Browser custom track) |
| Alignm length: | 86 |
| Alignm identity: | 75 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 146-240 |
| Cow position: | chr12:11106499-11106593 (view UCSC Genome Browser custom track) |
| Alignm length: | 95 |
| Alignm identity: | 81 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 146-248 |
| Cow position: | chr12:1344827-1344726 (view UCSC Genome Browser custom track) |
| Alignm length: | 103 |
| Alignm identity: | 84 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 98, 0 |
| Conread position: | 147-231 |
| Cow position: | chr12:16386376-16386460 (view UCSC Genome Browser custom track) |
| Alignm length: | 85 |
| Alignm identity: | 74 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 147-355 |
| Cow position: | chr12:35368723-35368491 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 176 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 86, 0 |
| Conread position: | 149-280 |
| Cow position: | chr12:23764563-23764425 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 108 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 76, 0 |
| Conread position: | 149-355 |
| Cow position: | chr12:6410655-6410882 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 178 |
| Alignm E-value: | 6e-35 |
| Alignm gaps (pig, cow): | 66, 191 |
| Conread position: | 150-352 |
| Cow position: | chr12:30438314-30438098 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 163 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 71, 10 |
| Conread position: | 150-354 |
| Cow position: | chr12:4596542-4596316 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 177 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 83, 0 |
| Conread position: | 150-354 |
| Cow position: | chr12:34007378-34007158 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 168 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 89, 23 |
| Conread position: | 150-355 |
| Cow position: | chr12:38010009-38010209 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 140 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 92, 0 |
| Conread position: | 151-355 |
| Cow position: | chr12:4085969-4085766 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 150 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 121, 81 |
| Conread position: | 153-344 |
| Cow position: | chr12:30590842-30590628 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 158 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 75, 0 |
| Conread position: | 153-351 |
| Cow position: | chr12:7311456-7311250 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 148 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 50, 0 |
| Conread position: | 153-355 |
| Cow position: | chr12:28582434-28582654 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 168 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 38, 22 |
| Conread position: | 154-248 |
| Cow position: | chr12:4797374-4797281 (view UCSC Genome Browser custom track) |
| Alignm length: | 95 |
| Alignm identity: | 80 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 88, 0 |
| Conread position: | 154-248 |
| Cow position: | chr12:22752699-22752604 (view UCSC Genome Browser custom track) |
| Alignm length: | 96 |
| Alignm identity: | 84 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 87, 0 |
| Conread position: | 154-355 |
| Cow position: | chr12:24211481-24211269 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 162 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 78, 185 |
| Conread position: | 155-355 |
| Cow position: | chr12:44622421-44622204 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 154 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 69, 0 |
| Conread position: | 161-355 |
| Cow position: | chr12:9413741-9413932 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 145 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 80, 112 |
| Conread position: | 163-344 |
| Cow position: | chr12:17717127-17716939 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 149 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 71, 21 |
| Conread position: | 164-353 |
| Cow position: | chr12:8868818-8869025 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 163 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 69, 0 |
| Conread position: | 175-355 |
| Cow position: | chr12:25452394-25452597 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 155 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 58, 173 |
| Conread position: | 178-353 |
| Cow position: | chr12:5658027-5658217 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 144 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 55, 115 |
| Conread position: | 226-349 |
| Cow position: | chr12:24107558-24107689 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 103 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 232-351 |
| Cow position: | chr12:11583371-11583254 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 104 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 22, 97 |
| Conread position: | 240-353 |
| Cow position: | chr12:12300888-12300773 (view UCSC Genome Browser custom track) |
| Alignm length: | 116 |
| Alignm identity: | 96 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 240-355 |
| Cow position: | chr12:18021565-18021445 (view UCSC Genome Browser custom track) |
| Alignm length: | 121 |
| Alignm identity: | 101 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 240-355 |
| Cow position: | chr12:20326745-20326624 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 99 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 242-350 |
| Cow position: | chr12:20284086-20283981 (view UCSC Genome Browser custom track) |
| Alignm length: | 110 |
| Alignm identity: | 90 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 12, 36 |
| Conread position: | 259-353 |
| Cow position: | chr12:40270147-40270240 (view UCSC Genome Browser custom track) |
| Alignm length: | 95 |
| Alignm identity: | 82 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 21, 0 |
| Conread position: | 272-353 |
| Cow position: | chr12:3039439-3039358 (view UCSC Genome Browser custom track) |
| Alignm length: | 82 |
| Alignm identity: | 75 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
Show alignments to all cow chromosomes.