Cow genome map

Conread name: rcki29_p3.y1

Conread position: 71-240
Cow position:
Alignm length: 176
Alignm identity: 127
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 25, 51

Conread position: 72-231
Cow position:
Alignm length: 174
Alignm identity: 131
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 53, 0

Conread position: 73-251
Cow position:
Alignm length: 185
Alignm identity: 139
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 12, 79

Conread position: 73-352
Cow position:
Alignm length: 292
Alignm identity: 196
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 81, 180

Conread position: 73-355
Cow position:
Alignm length: 309
Alignm identity: 223
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 49, 66

Conread position: 74-248
Cow position:
Alignm length: 189
Alignm identity: 141
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 13, 182

Conread position: 74-253
Cow position:
Alignm length: 188
Alignm identity: 138
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 16, 0

Conread position: 75-248
Cow position:
Alignm length: 180
Alignm identity: 132
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 13, 77

Conread position: 76-248
Cow position:
Alignm length: 186
Alignm identity: 138
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 38, 0

Conread position: 76-323
Cow position:
Alignm length: 287
Alignm identity: 212
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 46, 0

Conread position: 76-350
Cow position:
Alignm length: 291
Alignm identity: 198
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 165, 33

Conread position: 76-353
Cow position:
Alignm length: 301
Alignm identity: 200
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 11, 218

Conread position: 76-355
Cow position:
Alignm length: 299
Alignm identity: 216
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 46, 7

Conread position: 76-355
Cow position:
Alignm length: 308
Alignm identity: 220
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 10, 151

Conread position: 76-355
Cow position:
Alignm length: 314
Alignm identity: 224
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 46, 184

Conread position: 77-355
Cow position:
Alignm length: 319
Alignm identity: 242
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 45, 0

Conread position: 78-354
Cow position:
Alignm length: 307
Alignm identity: 231
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 44, 141

Conread position: 78-355
Cow position:
Alignm length: 304
Alignm identity: 212
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 44, 178

Conread position: 80-237
Cow position:
Alignm length: 165
Alignm identity: 125
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 60, 97

Conread position: 81-235
Cow position:
Alignm length: 158
Alignm identity: 113
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 52, 0

Conread position: 81-248
Cow position:
Alignm length: 184
Alignm identity: 141
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 41, 179

Conread position: 81-248
Cow position:
Alignm length: 179
Alignm identity: 139
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 41, 166

Conread position: 81-276
Cow position:
Alignm length: 221
Alignm identity: 167
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 41, 0

Conread position: 81-354
Cow position:
Alignm length: 313
Alignm identity: 234
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 41, 0

Conread position: 81-355
Cow position:
Alignm length: 314
Alignm identity: 227
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 41, 135

Conread position: 82-354
Cow position:
Alignm length: 307
Alignm identity: 233
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 39, 93

Conread position: 82-355
Cow position:
Alignm length: 308
Alignm identity: 218
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 35, 103

Conread position: 83-215
Cow position:
Alignm length: 144
Alignm identity: 117
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 25, 0

Conread position: 83-225
Cow position:
Alignm length: 143
Alignm identity: 105
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 83-225
Cow position:
Alignm length: 162
Alignm identity: 130
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 39, 0

Conread position: 83-227
Cow position:
Alignm length: 155
Alignm identity: 122
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 29, 128

Conread position: 83-228
Cow position:
Alignm length: 151
Alignm identity: 116
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 30, 70

Conread position: 83-230
Cow position:
Alignm length: 163
Alignm identity: 126
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 39, 18

Conread position: 83-230
Cow position:
Alignm length: 169
Alignm identity: 131
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 31, 0

Conread position: 83-231
Cow position:
Alignm length: 154
Alignm identity: 118
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 40, 62

Conread position: 83-232
Cow position:
Alignm length: 163
Alignm identity: 125
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 39, 0

Conread position: 83-232
Cow position:
Alignm length: 163
Alignm identity: 130
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 39, 0

Conread position: 83-235
Cow position:
Alignm length: 158
Alignm identity: 121
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 39, 70

Conread position: 83-240
Cow position:
Alignm length: 173
Alignm identity: 132
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 39, 0

Conread position: 83-248
Cow position:
Alignm length: 180
Alignm identity: 136
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 39, 173

Conread position: 83-253
Cow position:
Alignm length: 179
Alignm identity: 129
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 56, 97

Conread position: 83-253
Cow position:
Alignm length: 182
Alignm identity: 131
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 28, 147

Conread position: 83-273
Cow position:
Alignm length: 204
Alignm identity: 152
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 56, 32

Conread position: 83-301
Cow position:
Alignm length: 225
Alignm identity: 159
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 46, 154

Conread position: 83-323
Cow position:
Alignm length: 254
Alignm identity: 196
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 168

Conread position: 83-349
Cow position:
Alignm length: 284
Alignm identity: 196
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 41, 0

Conread position: 83-349
Cow position:
Alignm length: 282
Alignm identity: 201
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 147, 32

Conread position: 83-353
Cow position:
Alignm length: 302
Alignm identity: 215
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 39, 70

Conread position: 83-353
Cow position:
Alignm length: 288
Alignm identity: 201
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 27, 104

Conread position: 83-354
Cow position:
Alignm length: 289
Alignm identity: 205
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 29, 243

Conread position: 83-354
Cow position:
Alignm length: 297
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 70

Conread position: 83-354
Cow position:
Alignm length: 289
Alignm identity: 202
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 39, 119

Conread position: 83-354
Cow position:
Alignm length: 292
Alignm identity: 210
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 69, 25

Conread position: 83-355
Cow position:
Alignm length: 287
Alignm identity: 198
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 39, 95

Conread position: 83-355
Cow position:
Alignm length: 296
Alignm identity: 214
Alignm E-value: 9e-38
Alignm gaps (pig, cow): 37, 0

Conread position: 83-355
Cow position:
Alignm length: 306
Alignm identity: 228
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 12, 112

Conread position: 83-355
Cow position:
Alignm length: 306
Alignm identity: 228
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 12, 112

Conread position: 83-355
Cow position:
Alignm length: 300
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 253

Conread position: 83-355
Cow position:
Alignm length: 308
Alignm identity: 228
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 34, 0

Conread position: 84-244
Cow position:
Alignm length: 166
Alignm identity: 123
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 38, 69

Conread position: 84-353
Cow position:
Alignm length: 309
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 0

Conread position: 86-351
Cow position:
Alignm length: 308
Alignm identity: 220
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 36, 105

Conread position: 87-230
Cow position:
Alignm length: 145
Alignm identity: 106
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 41, 0

Conread position: 87-230
Cow position:
Alignm length: 149
Alignm identity: 113
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 35, 66

Conread position: 87-230
Cow position:
Alignm length: 149
Alignm identity: 123
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 35, 21

Conread position: 87-248
Cow position:
Alignm length: 179
Alignm identity: 142
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 35, 172

Conread position: 87-248
Cow position:
Alignm length: 172
Alignm identity: 134
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 35, 0

Conread position: 87-248
Cow position:
Alignm length: 167
Alignm identity: 128
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 36, 64

Conread position: 87-250
Cow position:
Alignm length: 166
Alignm identity: 121
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 63, 28

Conread position: 87-250
Cow position:
Alignm length: 183
Alignm identity: 143
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 35, 174

Conread position: 87-351
Cow position:
Alignm length: 293
Alignm identity: 206
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 28, 36

Conread position: 88-355
Cow position:
Alignm length: 299
Alignm identity: 209
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 34, 0

Conread position: 89-221
Cow position:
Alignm length: 139
Alignm identity: 109
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 28, 93

Conread position: 96-355
Cow position:
Alignm length: 278
Alignm identity: 207
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 26, 231

Conread position: 97-228
Cow position:
Alignm length: 138
Alignm identity: 107
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 20, 0

Conread position: 98-353
Cow position:
Alignm length: 280
Alignm identity: 201
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 54, 17

Conread position: 99-351
Cow position:
Alignm length: 273
Alignm identity: 197
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 29, 55

Conread position: 104-323
Cow position:
Alignm length: 232
Alignm identity: 163
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 21, 148

Conread position: 121-250
Cow position:
Alignm length: 130
Alignm identity: 99
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 16, 0

Conread position: 121-349
Cow position:
Alignm length: 251
Alignm identity: 178
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 31, 0

Conread position: 123-240
Cow position:
Alignm length: 118
Alignm identity: 95
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 8, 0

Conread position: 128-354
Cow position:
Alignm length: 256
Alignm identity: 193
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 105, 20

Conread position: 132-230
Cow position:
Alignm length: 99
Alignm identity: 82
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 133-354
Cow position:
Alignm length: 232
Alignm identity: 166
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 106, 15

Conread position: 135-248
Cow position:
Alignm length: 114
Alignm identity: 91
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 107, 0

Conread position: 136-355
Cow position:
Alignm length: 244
Alignm identity: 177
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 64, 190

Conread position: 137-248
Cow position:
Alignm length: 113
Alignm identity: 91
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 104, 0

Conread position: 137-350
Cow position:
Alignm length: 237
Alignm identity: 181
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 96, 0

Conread position: 137-353
Cow position:
Alignm length: 242
Alignm identity: 188
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 96, 0

Conread position: 137-355
Cow position:
Alignm length: 222
Alignm identity: 172
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 136, 95

Conread position: 137-355
Cow position:
Alignm length: 245
Alignm identity: 197
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 0

Conread position: 137-355
Cow position:
Alignm length: 220
Alignm identity: 149
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 116, 16

Conread position: 144-231
Cow position:
Alignm length: 88
Alignm identity: 77
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 144-240
Cow position:
Alignm length: 97
Alignm identity: 85
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 17, 0

Conread position: 144-240
Cow position:
Alignm length: 97
Alignm identity: 82
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 144-240
Cow position:
Alignm length: 97
Alignm identity: 87
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 144-240
Cow position:
Alignm length: 97
Alignm identity: 87
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 144-248
Cow position:
Alignm length: 105
Alignm identity: 85
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 98, 0

Conread position: 144-250
Cow position:
Alignm length: 107
Alignm identity: 86
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 98, 0

Conread position: 144-252
Cow position:
Alignm length: 110
Alignm identity: 90
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 93, 0

Conread position: 144-273
Cow position:
Alignm length: 133
Alignm identity: 110
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 89, 0

Conread position: 144-340
Cow position:
Alignm length: 220
Alignm identity: 163
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 85, 177

Conread position: 144-352
Cow position:
Alignm length: 227
Alignm identity: 169
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 93, 215

Conread position: 144-352
Cow position:
Alignm length: 232
Alignm identity: 170
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 85, 214

Conread position: 144-353
Cow position:
Alignm length: 229
Alignm identity: 164
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 88, 0

Conread position: 144-353
Cow position:
Alignm length: 231
Alignm identity: 178
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 89, 204

Conread position: 144-354
Cow position:
Alignm length: 231
Alignm identity: 179
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 68, 0

Conread position: 144-354
Cow position:
Alignm length: 229
Alignm identity: 179
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 96, 0

Conread position: 144-355
Cow position:
Alignm length: 221
Alignm identity: 171
Alignm E-value: 9e-38
Alignm gaps (pig, cow): 89, 140

Conread position: 144-355
Cow position:
Alignm length: 233
Alignm identity: 186
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 25, 30

Conread position: 144-355
Cow position:
Alignm length: 215
Alignm identity: 148
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 89, 124

Conread position: 144-355
Cow position:
Alignm length: 229
Alignm identity: 175
Alignm E-value: 9e-38
Alignm gaps (pig, cow): 91, 0

Conread position: 144-355
Cow position:
Alignm length: 223
Alignm identity: 157
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 33, 19

Conread position: 145-352
Cow position:
Alignm length: 233
Alignm identity: 168
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 36, 203

Conread position: 145-355
Cow position:
Alignm length: 220
Alignm identity: 160
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 87, 63

Conread position: 148-240
Cow position:
Alignm length: 93
Alignm identity: 78
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 148-355
Cow position:
Alignm length: 221
Alignm identity: 169
Alignm E-value: 9e-38
Alignm gaps (pig, cow): 37, 105

Conread position: 149-352
Cow position:
Alignm length: 215
Alignm identity: 153
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 95, 0

Conread position: 149-353
Cow position:
Alignm length: 229
Alignm identity: 176
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 29, 211

Conread position: 149-354
Cow position:
Alignm length: 227
Alignm identity: 171
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 79, 0

Conread position: 149-355
Cow position:
Alignm length: 216
Alignm identity: 159
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 49, 0

Conread position: 150-353
Cow position:
Alignm length: 217
Alignm identity: 169
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 74, 0

Conread position: 150-355
Cow position:
Alignm length: 211
Alignm identity: 175
Alignm E-value: 0
Alignm gaps (pig, cow): 103, 87

Conread position: 151-351
Cow position:
Alignm length: 215
Alignm identity: 163
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 80, 0

Conread position: 151-353
Cow position:
Alignm length: 220
Alignm identity: 171
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 82, 48

Conread position: 153-353
Cow position:
Alignm length: 221
Alignm identity: 164
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 80, 50

Conread position: 153-355
Cow position:
Alignm length: 220
Alignm identity: 166
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 87, 167

Conread position: 153-355
Cow position:
Alignm length: 215
Alignm identity: 158
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 79, 136

Conread position: 154-355
Cow position:
Alignm length: 221
Alignm identity: 168
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 75, 206

Conread position: 155-353
Cow position:
Alignm length: 217
Alignm identity: 162
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 67, 172

Conread position: 156-353
Cow position:
Alignm length: 220
Alignm identity: 162
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 78, 21

Conread position: 171-355
Cow position:
Alignm length: 205
Alignm identity: 152
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 62, 17

Conread position: 189-349
Cow position:
Alignm length: 181
Alignm identity: 139
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 44, 0

Conread position: 223-353
Cow position:
Alignm length: 137
Alignm identity: 105
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 31, 0

Conread position: 232-348
Cow position:
Alignm length: 120
Alignm identity: 95
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 22, 0

Conread position: 232-355
Cow position:
Alignm length: 129
Alignm identity: 103
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 22, 106

Conread position: 232-355
Cow position:
Alignm length: 130
Alignm identity: 105
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 22, 122

Conread position: 232-355
Cow position:
Alignm length: 130
Alignm identity: 113
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 22, 0

Conread position: 277-355
Cow position:
Alignm length: 79
Alignm identity: 73
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 0, 0

Show alignments to all cow chromosomes.