Cow genome map
| Conread name: | rcki29_p3.y1 |
| Conread position: | 71-227 |
| Cow position: | chr19:36177205-36177044 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 118 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 43, 0 |
| Conread position: | 71-247 |
| Cow position: | chr19:12202447-12202632 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 140 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 18, 32 |
| Conread position: | 71-248 |
| Cow position: | chr19:25927210-25927401 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 142 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 50, 186 |
| Conread position: | 71-355 |
| Cow position: | chr19:15091945-15092250 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 229 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 53, 103 |
| Conread position: | 72-235 |
| Cow position: | chr19:23088180-23088004 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 129 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 43, 0 |
| Conread position: | 72-250 |
| Cow position: | chr19:6093673-6093488 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 143 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 50, 105 |
| Conread position: | 73-230 |
| Cow position: | chr19:4438939-4438783 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 118 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 41, 101 |
| Conread position: | 73-235 |
| Cow position: | chr19:12943818-12943653 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 124 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 50, 85 |
| Conread position: | 75-230 |
| Cow position: | chr19:20517620-20517461 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 116 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 58, 0 |
| Conread position: | 75-238 |
| Cow position: | chr19:32666901-32666738 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 123 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 75, 40 |
| Conread position: | 75-253 |
| Cow position: | chr19:38009833-38010011 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 131 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 46, 81 |
| Conread position: | 76-249 |
| Cow position: | chr19:10930231-10930413 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 133 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 76-355 |
| Cow position: | chr19:11191426-11191739 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 231 |
| Alignm E-value: | 4.99997e-41 |
| Alignm gaps (pig, cow): | 35, 0 |
| Conread position: | 77-248 |
| Cow position: | chr19:13325303-13325477 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 140 |
| Alignm E-value: | 6e-33 |
| Alignm gaps (pig, cow): | 11, 76 |
| Conread position: | 80-250 |
| Cow position: | chr19:50850025-50849845 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 134 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 42, 8 |
| Conread position: | 81-229 |
| Cow position: | chr19:8185395-8185229 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 131 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 35, 0 |
| Conread position: | 81-230 |
| Cow position: | chr19:43413969-43413808 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 125 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 44, 0 |
| Conread position: | 81-248 |
| Cow position: | chr19:2068455-2068275 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 138 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 5, 169 |
| Conread position: | 81-267 |
| Cow position: | chr19:38500346-38500153 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 143 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 30, 159 |
| Conread position: | 81-306 |
| Cow position: | chr19:33610080-33609836 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 180 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 41, 176 |
| Conread position: | 81-351 |
| Cow position: | chr19:47671924-47671631 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 212 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 33, 0 |
| Conread position: | 81-352 |
| Cow position: | chr19:10755491-10755196 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 206 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 41, 208 |
| Conread position: | 81-353 |
| Cow position: | chr19:20622847-20622536 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 228 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 29, 258 |
| Conread position: | 81-354 |
| Cow position: | chr19:25041055-25041359 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 222 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 41, 22 |
| Conread position: | 81-355 |
| Cow position: | chr19:8869764-8869458 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 220 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 50, 11 |
| Conread position: | 81-355 |
| Cow position: | chr19:24358070-24358352 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 201 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 36, 69 |
| Conread position: | 81-355 |
| Cow position: | chr19:36845435-36845129 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 237 |
| Alignm E-value: | 7.00649e-45 |
| Alignm gaps (pig, cow): | 41, 252 |
| Conread position: | 82-220 |
| Cow position: | chr19:39378109-39378256 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 121 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 82-231 |
| Cow position: | chr19:22765801-22765647 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 120 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 36, 125 |
| Conread position: | 82-240 |
| Cow position: | chr19:41188025-41187854 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 129 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 40, 0 |
| Conread position: | 82-247 |
| Cow position: | chr19:7594965-7595138 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 138 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 7, 139 |
| Conread position: | 82-347 |
| Cow position: | chr19:13267017-13267307 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 221 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 40, 0 |
| Conread position: | 82-355 |
| Cow position: | chr19:15853115-15852825 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 206 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 41, 245 |
| Conread position: | 83-210 |
| Cow position: | chr19:25582490-25582350 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 111 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 39, 0 |
| Conread position: | 83-227 |
| Cow position: | chr19:10172518-10172365 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 116 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 39, 0 |
| Conread position: | 83-228 |
| Cow position: | chr19:33637365-33637221 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 110 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 56, 0 |
| Conread position: | 83-230 |
| Cow position: | chr19:30384909-30385068 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 127 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 39, 0 |
| Conread position: | 83-231 |
| Cow position: | chr19:30908088-30907927 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 124 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 39, 0 |
| Conread position: | 83-231 |
| Cow position: | chr19:39795377-39795214 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 125 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 39, 0 |
| Conread position: | 83-232 |
| Cow position: | chr19:55357234-55357078 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 123 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 6, 84 |
| Conread position: | 83-233 |
| Cow position: | chr19:30917754-30917922 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 128 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 34, 0 |
| Conread position: | 83-235 |
| Cow position: | chr19:37067321-37067160 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 122 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 39, 0 |
| Conread position: | 83-240 |
| Cow position: | chr19:5521970-5522140 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 135 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 39, 0 |
| Conread position: | 83-240 |
| Cow position: | chr19:41850057-41850218 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 124 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 34, 159 |
| Conread position: | 83-240 |
| Cow position: | chr19:49290270-49290442 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 128 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 39, 0 |
| Conread position: | 83-242 |
| Cow position: | chr19:28137335-28137167 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 125 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 34, 0 |
| Conread position: | 83-247 |
| Cow position: | chr19:28037728-28037897 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 123 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 39, 165 |
| Conread position: | 83-248 |
| Cow position: | chr19:2137640-2137817 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 141 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 39, 172 |
| Conread position: | 83-248 |
| Cow position: | chr19:42904180-42904017 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 126 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 31, 78 |
| Conread position: | 83-250 |
| Cow position: | chr19:4586361-4586541 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 139 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 40, 173 |
| Conread position: | 83-250 |
| Cow position: | chr19:39587067-39587238 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 131 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 39, 135 |
| Conread position: | 83-269 |
| Cow position: | chr19:23831537-23831321 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 162 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 35, 0 |
| Conread position: | 83-273 |
| Cow position: | chr19:32938047-32937843 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 146 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 40, 0 |
| Conread position: | 83-317 |
| Cow position: | chr19:35321948-35322221 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 199 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 11, 0 |
| Conread position: | 83-330 |
| Cow position: | chr19:16659399-16659658 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 193 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 39, 70 |
| Conread position: | 83-331 |
| Cow position: | chr19:25998442-25998177 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 184 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 25, 0 |
| Conread position: | 83-332 |
| Cow position: | chr19:55247821-55247538 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 204 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 27, 250 |
| Conread position: | 83-344 |
| Cow position: | chr19:34026547-34026808 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 193 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 150, 63 |
| Conread position: | 83-349 |
| Cow position: | chr19:729560-729861 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 230 |
| Alignm E-value: | 5.99756e-43 |
| Alignm gaps (pig, cow): | 35, 139 |
| Conread position: | 83-351 |
| Cow position: | chr19:3217191-3216899 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 214 |
| Alignm E-value: | 6e-33 |
| Alignm gaps (pig, cow): | 40, 18 |
| Conread position: | 83-353 |
| Cow position: | chr19:10970920-10971215 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 217 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 42, 69 |
| Conread position: | 83-353 |
| Cow position: | chr19:30471169-30471464 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 206 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 39, 0 |
| Conread position: | 83-354 |
| Cow position: | chr19:5912769-5913078 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 232 |
| Alignm E-value: | 4.99997e-41 |
| Alignm gaps (pig, cow): | 39, 0 |
| Conread position: | 83-355 |
| Cow position: | chr19:268536-268231 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 226 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 39, 0 |
| Conread position: | 83-355 |
| Cow position: | chr19:5185070-5185367 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 206 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 40, 0 |
| Conread position: | 83-355 |
| Cow position: | chr19:6532062-6531767 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 222 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 37, 94 |
| Conread position: | 83-355 |
| Cow position: | chr19:12698505-12698201 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 214 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 36, 16 |
| Conread position: | 83-355 |
| Cow position: | chr19:13121098-13121396 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 229 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 0 |
| Conread position: | 83-355 |
| Cow position: | chr19:46180672-46180937 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 206 |
| Alignm E-value: | 5.99756e-43 |
| Alignm gaps (pig, cow): | 40, 62 |
| Conread position: | 83-355 |
| Cow position: | chr19:55475760-55475485 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 211 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 246 |
| Conread position: | 84-238 |
| Cow position: | chr19:37560021-37560180 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 121 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 39, 0 |
| Conread position: | 84-252 |
| Cow position: | chr19:29958501-29958676 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 137 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 38, 69 |
| Conread position: | 84-352 |
| Cow position: | chr19:36380391-36380125 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 189 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 46, 41 |
| Conread position: | 84-355 |
| Cow position: | chr19:2220885-2221201 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 238 |
| Alignm E-value: | 4.99997e-41 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 84-355 |
| Cow position: | chr19:2589702-2589386 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 228 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 33, 0 |
| Conread position: | 85-342 |
| Cow position: | chr19:12601988-12601702 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 203 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 37, 0 |
| Conread position: | 86-333 |
| Cow position: | chr19:39648905-39649176 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 193 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 54, 0 |
| Conread position: | 87-231 |
| Cow position: | chr19:1978359-1978205 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 119 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 35, 0 |
| Conread position: | 87-231 |
| Cow position: | chr19:38597251-38597094 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 123 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 35, 0 |
| Conread position: | 87-273 |
| Cow position: | chr19:30541382-30541584 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 152 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 38, 134 |
| Conread position: | 87-354 |
| Cow position: | chr19:23304305-23304617 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 231 |
| Alignm E-value: | 8e-35 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 87-355 |
| Cow position: | chr19:34166552-34166248 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 239 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 269 |
| Conread position: | 89-353 |
| Cow position: | chr19:26975889-26976180 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 209 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 33, 244 |
| Conread position: | 89-353 |
| Cow position: | chr19:35540465-35540176 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 219 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 33, 64 |
| Conread position: | 90-333 |
| Cow position: | chr19:35870968-35870693 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 204 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 27, 110 |
| Conread position: | 91-347 |
| Cow position: | chr19:25526459-25526166 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 223 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 31, 278 |
| Conread position: | 92-353 |
| Cow position: | chr19:1351304-1351556 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 184 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 162, 22 |
| Conread position: | 94-240 |
| Cow position: | chr19:17964827-17964671 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 120 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 28, 78 |
| Conread position: | 95-233 |
| Cow position: | chr19:24224510-24224361 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 117 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 27, 0 |
| Conread position: | 95-245 |
| Cow position: | chr19:12469638-12469799 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 124 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 27, 80 |
| Conread position: | 95-307 |
| Cow position: | chr19:25410678-25410918 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 181 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 27, 232 |
| Conread position: | 99-355 |
| Cow position: | chr19:33237330-33237054 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 201 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 20, 27 |
| Conread position: | 100-354 |
| Cow position: | chr19:5433412-5433676 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 203 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 15, 23 |
| Conread position: | 105-354 |
| Cow position: | chr19:49456991-49457252 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 189 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 43, 16 |
| Conread position: | 121-355 |
| Cow position: | chr19:29115875-29115621 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 186 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 109, 27 |
| Conread position: | 123-351 |
| Cow position: | chr19:53542768-53543009 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 178 |
| Alignm E-value: | 6e-33 |
| Alignm gaps (pig, cow): | 14, 27 |
| Conread position: | 133-355 |
| Cow position: | chr19:22134032-22134267 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 181 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 99, 15 |
| Conread position: | 137-238 |
| Cow position: | chr19:2042204-2042102 (view UCSC Genome Browser custom track) |
| Alignm length: | 103 |
| Alignm identity: | 85 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 8, 0 |
| Conread position: | 137-246 |
| Cow position: | chr19:38625087-38624980 (view UCSC Genome Browser custom track) |
| Alignm length: | 110 |
| Alignm identity: | 89 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 21, 0 |
| Conread position: | 137-284 |
| Cow position: | chr19:2223985-2224141 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 124 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 93, 0 |
| Conread position: | 137-355 |
| Cow position: | chr19:33469137-33468902 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 177 |
| Alignm E-value: | 6e-33 |
| Alignm gaps (pig, cow): | 96, 13 |
| Conread position: | 137-355 |
| Cow position: | chr19:55395018-55394784 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 178 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 95, 79 |
| Conread position: | 143-353 |
| Cow position: | chr19:48475240-48475024 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 150 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 93, 212 |
| Conread position: | 144-248 |
| Cow position: | chr19:30227631-30227528 (view UCSC Genome Browser custom track) |
| Alignm length: | 105 |
| Alignm identity: | 87 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 98, 0 |
| Conread position: | 144-248 |
| Cow position: | chr19:30241809-30241706 (view UCSC Genome Browser custom track) |
| Alignm length: | 105 |
| Alignm identity: | 85 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 98, 0 |
| Conread position: | 144-259 |
| Cow position: | chr19:33626250-33626364 (view UCSC Genome Browser custom track) |
| Alignm length: | 116 |
| Alignm identity: | 94 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 98, 0 |
| Conread position: | 144-261 |
| Cow position: | chr19:18921131-18921247 (view UCSC Genome Browser custom track) |
| Alignm length: | 118 |
| Alignm identity: | 95 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 98, 0 |
| Conread position: | 144-305 |
| Cow position: | chr19:43373150-43372971 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 140 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 89, 0 |
| Conread position: | 144-336 |
| Cow position: | chr19:24192472-24192285 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 137 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 109, 77 |
| Conread position: | 144-352 |
| Cow position: | chr19:9295302-9295085 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 161 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 52, 80 |
| Conread position: | 144-354 |
| Cow position: | chr19:8864851-8864626 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 175 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 84, 32 |
| Conread position: | 144-354 |
| Cow position: | chr19:28451499-28451286 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 150 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 108, 28 |
| Conread position: | 144-354 |
| Cow position: | chr19:43292165-43291930 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 183 |
| Alignm E-value: | 9e-37 |
| Alignm gaps (pig, cow): | 75, 0 |
| Conread position: | 144-355 |
| Cow position: | chr19:43954-43725 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 175 |
| Alignm E-value: | 8e-36 |
| Alignm gaps (pig, cow): | 89, 0 |
| Conread position: | 144-355 |
| Cow position: | chr19:6079256-6079482 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 176 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 89, 9 |
| Conread position: | 144-355 |
| Cow position: | chr19:18646392-18646614 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 156 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 89, 0 |
| Conread position: | 144-355 |
| Cow position: | chr19:19919351-19919584 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 180 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 94, 28 |
| Conread position: | 144-355 |
| Cow position: | chr19:25673415-25673642 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 176 |
| Alignm E-value: | 9e-37 |
| Alignm gaps (pig, cow): | 76, 29 |
| Conread position: | 144-355 |
| Cow position: | chr19:38111576-38111350 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 170 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 98, 184 |
| Conread position: | 145-231 |
| Cow position: | chr19:31998163-31998249 (view UCSC Genome Browser custom track) |
| Alignm length: | 87 |
| Alignm identity: | 75 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 145-352 |
| Cow position: | chr19:47859204-47859434 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 174 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 16, 38 |
| Conread position: | 145-355 |
| Cow position: | chr19:21817073-21816841 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 188 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 86, 0 |
| Conread position: | 145-355 |
| Cow position: | chr19:25807197-25807425 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 174 |
| Alignm E-value: | 8e-35 |
| Alignm gaps (pig, cow): | 78, 0 |
| Conread position: | 145-355 |
| Cow position: | chr19:48021533-48021754 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 160 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 57, 75 |
| Conread position: | 146-230 |
| Cow position: | chr19:43985686-43985770 (view UCSC Genome Browser custom track) |
| Alignm length: | 85 |
| Alignm identity: | 74 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 146-353 |
| Cow position: | chr19:42206032-42205812 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 165 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 29, 7 |
| Conread position: | 148-349 |
| Cow position: | chr19:34819079-34819306 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 180 |
| Alignm E-value: | 8e-36 |
| Alignm gaps (pig, cow): | 85, 210 |
| Conread position: | 148-354 |
| Cow position: | chr19:35233553-35233769 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 156 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 40, 162 |
| Conread position: | 149-235 |
| Cow position: | chr19:39781626-39781540 (view UCSC Genome Browser custom track) |
| Alignm length: | 87 |
| Alignm identity: | 75 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 149-246 |
| Cow position: | chr19:16870669-16870766 (view UCSC Genome Browser custom track) |
| Alignm length: | 99 |
| Alignm identity: | 83 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 26, 21 |
| Conread position: | 149-268 |
| Cow position: | chr19:51637146-51637028 (view UCSC Genome Browser custom track) |
| Alignm length: | 120 |
| Alignm identity: | 93 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 112, 0 |
| Conread position: | 149-327 |
| Cow position: | chr19:18054150-18054340 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 137 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 93, 0 |
| Conread position: | 149-355 |
| Cow position: | chr19:3245954-3246173 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 155 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 77, 0 |
| Conread position: | 149-355 |
| Cow position: | chr19:8128411-8128198 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 154 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 25, 17 |
| Conread position: | 149-355 |
| Cow position: | chr19:25652653-25652875 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 173 |
| Alignm E-value: | 8e-36 |
| Alignm gaps (pig, cow): | 9, 167 |
| Conread position: | 149-355 |
| Cow position: | chr19:41497540-41497751 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 144 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 84, 128 |
| Conread position: | 150-253 |
| Cow position: | chr19:52568370-52568472 (view UCSC Genome Browser custom track) |
| Alignm length: | 104 |
| Alignm identity: | 87 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 92, 0 |
| Conread position: | 150-352 |
| Cow position: | chr19:6687898-6688117 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 163 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 87, 0 |
| Conread position: | 150-353 |
| Cow position: | chr19:43058629-43058416 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 166 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 83, 11 |
| Conread position: | 150-355 |
| Cow position: | chr19:15862943-15863164 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 166 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 13, 183 |
| Conread position: | 150-355 |
| Cow position: | chr19:39361249-39361020 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 169 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 69, 44 |
| Conread position: | 152-351 |
| Cow position: | chr19:50682342-50682558 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 165 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 73, 197 |
| Conread position: | 153-355 |
| Cow position: | chr19:44572181-44571982 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 138 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 79, 0 |
| Conread position: | 154-345 |
| Cow position: | chr19:2207691-2207885 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 145 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 83, 62 |
| Conread position: | 154-353 |
| Cow position: | chr19:22798976-22799199 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 175 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 79, 169 |
| Conread position: | 155-353 |
| Cow position: | chr19:7404276-7404499 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 166 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 78, 0 |
| Conread position: | 156-349 |
| Cow position: | chr19:37423192-37423385 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 159 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 97, 74 |
| Conread position: | 156-353 |
| Cow position: | chr19:30552116-30551907 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 161 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 81, 155 |
| Conread position: | 159-355 |
| Cow position: | chr19:47118398-47118618 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 164 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 163-355 |
| Cow position: | chr19:17273648-17273852 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 158 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 70, 0 |
| Conread position: | 164-355 |
| Cow position: | chr19:53953599-53953779 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 149 |
| Alignm E-value: | 7e-34 |
| Alignm gaps (pig, cow): | 81, 0 |
| Conread position: | 172-352 |
| Cow position: | chr19:20092912-20093105 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 150 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 57, 120 |
| Conread position: | 176-349 |
| Cow position: | chr19:4328974-4329167 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 150 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 57, 0 |
| Conread position: | 179-355 |
| Cow position: | chr19:42726410-42726238 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 132 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 79, 53 |
| Conread position: | 206-353 |
| Cow position: | chr19:15442803-15442644 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 122 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 27, 0 |
| Conread position: | 214-353 |
| Cow position: | chr19:14992898-14993043 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 112 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 40, 0 |
| Conread position: | 232-355 |
| Cow position: | chr19:2734458-2734328 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 104 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 232-355 |
| Cow position: | chr19:14928648-14928778 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 104 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 232-355 |
| Cow position: | chr19:51385691-51385819 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 103 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 233-353 |
| Cow position: | chr19:21335598-21335727 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 103 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 21, 0 |
| Conread position: | 240-354 |
| Cow position: | chr19:38596618-38596498 (view UCSC Genome Browser custom track) |
| Alignm length: | 121 |
| Alignm identity: | 100 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 240-354 |
| Cow position: | chr19:39587525-39587644 (view UCSC Genome Browser custom track) |
| Alignm length: | 121 |
| Alignm identity: | 98 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 14, 20 |
| Conread position: | 240-355 |
| Cow position: | chr19:33932148-33932271 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 102 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 241-353 |
| Cow position: | chr19:1898238-1898356 (view UCSC Genome Browser custom track) |
| Alignm length: | 120 |
| Alignm identity: | 100 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 13, 20 |
| Conread position: | 241-355 |
| Cow position: | chr19:10786369-10786492 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 101 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 245-353 |
| Cow position: | chr19:2138109-2138225 (view UCSC Genome Browser custom track) |
| Alignm length: | 117 |
| Alignm identity: | 96 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 8, 0 |
| Conread position: | 276-355 |
| Cow position: | chr19:39622846-39622925 (view UCSC Genome Browser custom track) |
| Alignm length: | 80 |
| Alignm identity: | 73 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
Show alignments to all cow chromosomes.