Cow genome map

Conread name: rcki29_p3.y1

Conread position: 71-257
Cow position:
Alignm length: 200
Alignm identity: 144
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 52, 184

Conread position: 71-345
Cow position:
Alignm length: 279
Alignm identity: 199
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 22, 163

Conread position: 71-355
Cow position:
Alignm length: 329
Alignm identity: 237
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 16, 286

Conread position: 72-355
Cow position:
Alignm length: 314
Alignm identity: 228
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 17, 88

Conread position: 73-355
Cow position:
Alignm length: 295
Alignm identity: 195
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 168, 37

Conread position: 74-235
Cow position:
Alignm length: 165
Alignm identity: 121
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 9, 129

Conread position: 75-238
Cow position:
Alignm length: 179
Alignm identity: 135
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 12, 0

Conread position: 75-239
Cow position:
Alignm length: 176
Alignm identity: 130
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 47, 125

Conread position: 75-248
Cow position:
Alignm length: 189
Alignm identity: 136
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 48, 0

Conread position: 75-352
Cow position:
Alignm length: 294
Alignm identity: 205
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 39, 12

Conread position: 75-355
Cow position:
Alignm length: 294
Alignm identity: 215
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 47, 12

Conread position: 75-355
Cow position:
Alignm length: 313
Alignm identity: 218
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 44, 0

Conread position: 75-355
Cow position:
Alignm length: 302
Alignm identity: 216
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 36, 52

Conread position: 76-333
Cow position:
Alignm length: 267
Alignm identity: 188
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 12, 133

Conread position: 76-353
Cow position:
Alignm length: 313
Alignm identity: 218
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 39, 128

Conread position: 76-355
Cow position:
Alignm length: 300
Alignm identity: 208
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 47, 210

Conread position: 76-355
Cow position:
Alignm length: 302
Alignm identity: 220
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 38, 239

Conread position: 77-221
Cow position:
Alignm length: 156
Alignm identity: 122
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 48, 0

Conread position: 77-279
Cow position:
Alignm length: 223
Alignm identity: 162
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 45, 0

Conread position: 78-353
Cow position:
Alignm length: 304
Alignm identity: 220
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 44, 0

Conread position: 81-240
Cow position:
Alignm length: 173
Alignm identity: 133
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 41, 0

Conread position: 81-354
Cow position:
Alignm length: 280
Alignm identity: 190
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 46, 86

Conread position: 81-355
Cow position:
Alignm length: 293
Alignm identity: 202
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 41, 0

Conread position: 82-355
Cow position:
Alignm length: 299
Alignm identity: 211
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 41, 71

Conread position: 83-230
Cow position:
Alignm length: 159
Alignm identity: 121
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 39, 0

Conread position: 83-230
Cow position:
Alignm length: 148
Alignm identity: 111
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 70, 0

Conread position: 83-231
Cow position:
Alignm length: 163
Alignm identity: 127
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 39, 0

Conread position: 83-231
Cow position:
Alignm length: 167
Alignm identity: 131
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 39, 0

Conread position: 83-231
Cow position:
Alignm length: 168
Alignm identity: 135
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 39, 0

Conread position: 83-231
Cow position:
Alignm length: 157
Alignm identity: 117
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 39, 0

Conread position: 83-234
Cow position:
Alignm length: 161
Alignm identity: 120
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 44, 0

Conread position: 83-235
Cow position:
Alignm length: 157
Alignm identity: 115
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 33, 0

Conread position: 83-238
Cow position:
Alignm length: 169
Alignm identity: 130
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 40, 23

Conread position: 83-240
Cow position:
Alignm length: 172
Alignm identity: 130
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 38, 0

Conread position: 83-240
Cow position:
Alignm length: 173
Alignm identity: 129
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 39, 0

Conread position: 83-247
Cow position:
Alignm length: 178
Alignm identity: 139
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 39, 174

Conread position: 83-248
Cow position:
Alignm length: 179
Alignm identity: 132
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 39, 52

Conread position: 83-248
Cow position:
Alignm length: 173
Alignm identity: 126
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 34, 76

Conread position: 83-325
Cow position:
Alignm length: 273
Alignm identity: 195
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 39, 0

Conread position: 83-335
Cow position:
Alignm length: 265
Alignm identity: 196
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 39, 52

Conread position: 83-344
Cow position:
Alignm length: 294
Alignm identity: 205
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 39, 9

Conread position: 83-349
Cow position:
Alignm length: 292
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 0

Conread position: 83-350
Cow position:
Alignm length: 300
Alignm identity: 210
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 39, 108

Conread position: 83-351
Cow position:
Alignm length: 295
Alignm identity: 207
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 69, 48

Conread position: 83-351
Cow position:
Alignm length: 290
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 32

Conread position: 83-353
Cow position:
Alignm length: 295
Alignm identity: 213
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 39, 68

Conread position: 83-353
Cow position:
Alignm length: 298
Alignm identity: 215
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 42, 55

Conread position: 83-354
Cow position:
Alignm length: 318
Alignm identity: 227
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 39, 0

Conread position: 83-354
Cow position:
Alignm length: 290
Alignm identity: 209
Alignm E-value: 8e-38
Alignm gaps (pig, cow): 39, 98

Conread position: 83-355
Cow position:
Alignm length: 304
Alignm identity: 210
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 40, 0

Conread position: 83-355
Cow position:
Alignm length: 306
Alignm identity: 214
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 10, 94

Conread position: 83-355
Cow position:
Alignm length: 302
Alignm identity: 221
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 69, 265

Conread position: 84-248
Cow position:
Alignm length: 177
Alignm identity: 130
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 41, 0

Conread position: 84-252
Cow position:
Alignm length: 169
Alignm identity: 122
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 30, 0

Conread position: 85-285
Cow position:
Alignm length: 211
Alignm identity: 147
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 35, 167

Conread position: 86-231
Cow position:
Alignm length: 159
Alignm identity: 120
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 36, 0

Conread position: 86-353
Cow position:
Alignm length: 311
Alignm identity: 235
Alignm E-value: 8e-38
Alignm gaps (pig, cow): 36, 255

Conread position: 87-240
Cow position:
Alignm length: 166
Alignm identity: 124
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 35, 86

Conread position: 87-353
Cow position:
Alignm length: 284
Alignm identity: 202
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 59, 67

Conread position: 88-238
Cow position:
Alignm length: 164
Alignm identity: 129
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 34, 90

Conread position: 88-250
Cow position:
Alignm length: 168
Alignm identity: 132
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 34, 61

Conread position: 92-253
Cow position:
Alignm length: 175
Alignm identity: 130
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 31, 163

Conread position: 93-352
Cow position:
Alignm length: 270
Alignm identity: 185
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 29, 159

Conread position: 101-270
Cow position:
Alignm length: 173
Alignm identity: 124
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 16, 24

Conread position: 103-355
Cow position:
Alignm length: 276
Alignm identity: 200
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 11, 67

Conread position: 124-248
Cow position:
Alignm length: 125
Alignm identity: 97
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 13, 0

Conread position: 133-228
Cow position:
Alignm length: 96
Alignm identity: 80
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 133-230
Cow position:
Alignm length: 98
Alignm identity: 81
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 137-352
Cow position:
Alignm length: 223
Alignm identity: 166
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 119, 190

Conread position: 137-355
Cow position:
Alignm length: 241
Alignm identity: 181
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 100, 0

Conread position: 137-355
Cow position:
Alignm length: 229
Alignm identity: 170
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 95, 132

Conread position: 137-355
Cow position:
Alignm length: 236
Alignm identity: 170
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 96, 0

Conread position: 141-355
Cow position:
Alignm length: 216
Alignm identity: 149
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 124, 103

Conread position: 142-355
Cow position:
Alignm length: 224
Alignm identity: 175
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 112, 69

Conread position: 144-231
Cow position:
Alignm length: 88
Alignm identity: 78
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 144-232
Cow position:
Alignm length: 89
Alignm identity: 77
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 9, 0

Conread position: 144-240
Cow position:
Alignm length: 97
Alignm identity: 81
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 144-240
Cow position:
Alignm length: 97
Alignm identity: 80
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 144-248
Cow position:
Alignm length: 105
Alignm identity: 95
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 98, 0

Conread position: 144-248
Cow position:
Alignm length: 106
Alignm identity: 90
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 93, 99

Conread position: 144-248
Cow position:
Alignm length: 105
Alignm identity: 90
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 144-350
Cow position:
Alignm length: 217
Alignm identity: 150
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 20, 193

Conread position: 144-351
Cow position:
Alignm length: 226
Alignm identity: 175
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 89, 0

Conread position: 144-353
Cow position:
Alignm length: 226
Alignm identity: 168
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 76, 207

Conread position: 144-353
Cow position:
Alignm length: 238
Alignm identity: 182
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 88, 0

Conread position: 144-353
Cow position:
Alignm length: 232
Alignm identity: 179
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 89, 26

Conread position: 144-355
Cow position:
Alignm length: 232
Alignm identity: 183
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 88, 0

Conread position: 144-355
Cow position:
Alignm length: 226
Alignm identity: 170
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 90, 24

Conread position: 144-355
Cow position:
Alignm length: 232
Alignm identity: 176
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 80, 0

Conread position: 144-355
Cow position:
Alignm length: 236
Alignm identity: 192
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 0

Conread position: 144-355
Cow position:
Alignm length: 221
Alignm identity: 162
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 97, 0

Conread position: 144-355
Cow position:
Alignm length: 225
Alignm identity: 157
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 89, 73

Conread position: 146-351
Cow position:
Alignm length: 223
Alignm identity: 176
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 71, 165

Conread position: 146-353
Cow position:
Alignm length: 219
Alignm identity: 160
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 87, 189

Conread position: 147-355
Cow position:
Alignm length: 228
Alignm identity: 179
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 86, 53

Conread position: 148-247
Cow position:
Alignm length: 100
Alignm identity: 83
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 94, 0

Conread position: 148-273
Cow position:
Alignm length: 138
Alignm identity: 112
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 85, 0

Conread position: 148-354
Cow position:
Alignm length: 218
Alignm identity: 163
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 106, 51

Conread position: 148-355
Cow position:
Alignm length: 226
Alignm identity: 181
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 0

Conread position: 149-353
Cow position:
Alignm length: 218
Alignm identity: 172
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 78, 131

Conread position: 149-353
Cow position:
Alignm length: 215
Alignm identity: 162
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 70, 0

Conread position: 149-353
Cow position:
Alignm length: 222
Alignm identity: 160
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 76, 16

Conread position: 149-354
Cow position:
Alignm length: 211
Alignm identity: 154
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 95, 153

Conread position: 149-355
Cow position:
Alignm length: 231
Alignm identity: 169
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 27, 20

Conread position: 149-355
Cow position:
Alignm length: 210
Alignm identity: 149
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 11, 112

Conread position: 149-355
Cow position:
Alignm length: 231
Alignm identity: 174
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 84, 23

Conread position: 150-257
Cow position:
Alignm length: 109
Alignm identity: 88
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 79, 101

Conread position: 150-350
Cow position:
Alignm length: 208
Alignm identity: 154
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 103, 75

Conread position: 150-353
Cow position:
Alignm length: 225
Alignm identity: 171
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 68, 160

Conread position: 150-353
Cow position:
Alignm length: 214
Alignm identity: 148
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 13, 0

Conread position: 150-354
Cow position:
Alignm length: 230
Alignm identity: 178
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 19, 24

Conread position: 150-355
Cow position:
Alignm length: 224
Alignm identity: 167
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 88, 0

Conread position: 150-355
Cow position:
Alignm length: 211
Alignm identity: 150
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 87, 153

Conread position: 154-353
Cow position:
Alignm length: 216
Alignm identity: 158
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 72, 0

Conread position: 155-353
Cow position:
Alignm length: 212
Alignm identity: 159
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 86, 0

Conread position: 158-353
Cow position:
Alignm length: 208
Alignm identity: 155
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 75, 132

Conread position: 158-355
Cow position:
Alignm length: 224
Alignm identity: 176
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 51, 166

Conread position: 160-353
Cow position:
Alignm length: 201
Alignm identity: 153
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 73, 127

Conread position: 196-355
Cow position:
Alignm length: 167
Alignm identity: 123
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 34, 109

Conread position: 223-355
Cow position:
Alignm length: 138
Alignm identity: 110
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 32, 25

Conread position: 229-355
Cow position:
Alignm length: 130
Alignm identity: 108
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 10, 0

Conread position: 232-355
Cow position:
Alignm length: 132
Alignm identity: 103
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 22, 0

Conread position: 232-355
Cow position:
Alignm length: 134
Alignm identity: 110
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 22, 0

Conread position: 233-355
Cow position:
Alignm length: 132
Alignm identity: 110
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 21, 0

Conread position: 235-353
Cow position:
Alignm length: 123
Alignm identity: 98
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 19, 0

Conread position: 240-353
Cow position:
Alignm length: 123
Alignm identity: 102
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 14, 0

Conread position: 240-355
Cow position:
Alignm length: 119
Alignm identity: 98
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 14, 0

Conread position: 244-355
Cow position:
Alignm length: 113
Alignm identity: 93
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 10, 0

Conread position: 278-354
Cow position:
Alignm length: 77
Alignm identity: 71
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 0, 0

Show alignments to all cow chromosomes.