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Cow genome map

           
Conread name:
           
rcki29_p3.y1
        

               
Conread position:
               
71-248
               

               
Cow position:
               
chr21:28030554-28030370 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
53, 165
               

               
Conread position:
               
71-253
               

               
Cow position:
               
chr21:32559096-32559287 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
58, 181
               

               
Conread position:
               
72-231
               

               
Cow position:
               
chr21:21940136-21940308 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
72-235
               

               
Cow position:
               
chr21:36817186-36817033 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
42, 0
               

               
Conread position:
               
73-231
               

               
Cow position:
               
chr21:3379480-3379653 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
44, 0
               

               
Conread position:
               
74-355
               

               
Cow position:
               
chr21:20153229-20152906 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
48, 123
               

               
Conread position:
               
75-238
               

               
Cow position:
               
chr21:31658882-31659059 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
75-248
               

               
Cow position:
               
chr21:43642789-43642620 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
64, 0
               

               
Conread position:
               
75-355
               

               
Cow position:
               
chr21:15444810-15445121 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
76-231
               

               
Cow position:
               
chr21:23568495-23568327 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
41, 0
               

               
Conread position:
               
76-248
               

               
Cow position:
               
chr21:19868692-19868874 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
41, 0
               

               
Conread position:
               
76-248
               

               
Cow position:
               
chr21:42189490-42189676 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
46, 0
               

               
Conread position:
               
76-322
               

               
Cow position:
               
chr21:44724106-44724380 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
46, 135
               

               
Conread position:
               
77-240
               

               
Cow position:
               
chr21:37837808-37837976 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
10, 68
               

               
Conread position:
               
77-250
               

               
Cow position:
               
chr21:28618045-28617867 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
77-259
               

               
Cow position:
               
chr21:2785232-2785423 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
45, 163
               

               
Conread position:
               
77-349
               

               
Cow position:
               
chr21:30592045-30592346 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
38, 264
               

               
Conread position:
               
77-353
               

               
Cow position:
               
chr21:29014647-29014959 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
8e-37
               

               
Alignm gaps (pig, cow):
               
10, 0
               

               
Conread position:
               
77-353
               

               
Cow position:
               
chr21:33413827-33414131 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
8, 255
               

               
Conread position:
               
77-355
               

               
Cow position:
               
chr21:36911008-36910692 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
9, 174
               

               
Conread position:
               
78-227
               

               
Cow position:
               
chr21:46612536-46612694 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
46, 0
               

               
Conread position:
               
78-230
               

               
Cow position:
               
chr21:7768696-7768538 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
10, 43
               

               
Conread position:
               
78-250
               

               
Cow position:
               
chr21:745438-745256 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
44, 127
               

               
Conread position:
               
78-355
               

               
Cow position:
               
chr21:82327-82031 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
81-249
               

               
Cow position:
               
chr21:4109042-4108857 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
41, 181
               

               
Conread position:
               
81-352
               

               
Cow position:
               
chr21:7394634-7394337 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
44, 128
               

               
Conread position:
               
81-355
               

               
Cow position:
               
chr21:41621393-41621076 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
81-355
               

               
Cow position:
               
chr21:43241106-43240819 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
6, 139
               

               
Conread position:
               
82-235
               

               
Cow position:
               
chr21:15012695-15012534 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
36, 0
               

               
Conread position:
               
82-248
               

               
Cow position:
               
chr21:20174576-20174399 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
40, 0
               

               
Conread position:
               
82-248
               

               
Cow position:
               
chr21:30658125-30657951 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
47, 0
               

               
Conread position:
               
82-321
               

               
Cow position:
               
chr21:802059-802321 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
41, 0
               

               
Conread position:
               
82-350
               

               
Cow position:
               
chr21:742538-742245 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
41, 273
               

               
Conread position:
               
82-355
               

               
Cow position:
               
chr21:4281618-4281919 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
8, 118
               

               
Conread position:
               
82-355
               

               
Cow position:
               
chr21:27863255-27863563 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
8e-37
               

               
Alignm gaps (pig, cow):
               
40, 101
               

               
Conread position:
               
83-230
               

               
Cow position:
               
chr21:29658537-29658376 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
39, 139
               

               
Conread position:
               
83-234
               

               
Cow position:
               
chr21:18495478-18495317 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
39, 113
               

               
Conread position:
               
83-235
               

               
Cow position:
               
chr21:641847-641682 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
83-235
               

               
Cow position:
               
chr21:6851428-6851267 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
83-235
               

               
Cow position:
               
chr21:24757200-24757034 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
83-237
               

               
Cow position:
               
chr21:30205131-30205280 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
83-240
               

               
Cow position:
               
chr21:4269200-4269034 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
31, 156
               

               
Conread position:
               
83-240
               

               
Cow position:
               
chr21:15869949-15869780 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
31, 11
               

               
Conread position:
               
83-240
               

               
Cow position:
               
chr21:30938403-30938576 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
83-246
               

               
Cow position:
               
chr21:36879620-36879787 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
39, 157
               

               
Conread position:
               
83-248
               

               
Cow position:
               
chr21:40059279-40059113 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
57, 35
               

               
Conread position:
               
83-248
               

               
Cow position:
               
chr21:44214374-44214210 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
39, 75
               

               
Conread position:
               
83-250
               

               
Cow position:
               
chr21:6945623-6945454 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
39, 61
               

               
Conread position:
               
83-341
               

               
Cow position:
               
chr21:13395844-13395564 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
41, 66
               

               
Conread position:
               
83-352
               

               
Cow position:
               
chr21:30217952-30218232 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
39, 254
               

               
Conread position:
               
83-352
               

               
Cow position:
               
chr21:33580674-33580376 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
48, 133
               

               
Conread position:
               
83-353
               

               
Cow position:
               
chr21:10673373-10673082 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
9e-38
               

               
Alignm gaps (pig, cow):
               
39, 122
               

               
Conread position:
               
83-353
               

               
Cow position:
               
chr21:45356078-45355790 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
149, 69
               

               
Conread position:
               
83-354
               

               
Cow position:
               
chr21:21907178-21907476 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
83-354
               

               
Cow position:
               
chr21:23587135-23586833 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
39, 102
               

               
Conread position:
               
83-354
               

               
Cow position:
               
chr21:30236579-30236864 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
69, 38
               

               
Conread position:
               
83-354
               

               
Cow position:
               
chr21:32339482-32339784 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
83-354
               

               
Cow position:
               
chr21:33791134-33791412 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
56, 32
               

               
Conread position:
               
83-355
               

               
Cow position:
               
chr21:957932-957625 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
39, 112
               

               
Conread position:
               
83-355
               

               
Cow position:
               
chr21:5427190-5426893 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
39, 107
               

               
Conread position:
               
83-355
               

               
Cow position:
               
chr21:6051768-6051459 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
28, 257
               

               
Conread position:
               
83-355
               

               
Cow position:
               
chr21:28244730-28244421 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
83-355
               

               
Cow position:
               
chr21:28919268-28919572 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
83-355
               

               
Cow position:
               
chr21:33996987-33997275 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
38, 141
               

               
Conread position:
               
83-355
               

               
Cow position:
               
chr21:40134409-40134112 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
44, 0
               

               
Conread position:
               
83-355
               

               
Cow position:
               
chr21:40266387-40266076 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
83-355
               

               
Cow position:
               
chr21:45970916-45971219 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
6.02558e-44
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
84-230
               

               
Cow position:
               
chr21:34581447-34581591 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
68, 31
               

               
Conread position:
               
84-231
               

               
Cow position:
               
chr21:9219281-9219136 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
52, 0
               

               
Conread position:
               
84-232
               

               
Cow position:
               
chr21:11678060-11678214 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
37, 59
               

               
Conread position:
               
84-240
               

               
Cow position:
               
chr21:6292011-6291836 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
84-351
               

               
Cow position:
               
chr21:18041626-18041892 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
68, 37
               

               
Conread position:
               
85-273
               

               
Cow position:
               
chr21:21159064-21158865 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
40, 0
               

               
Conread position:
               
85-352
               

               
Cow position:
               
chr21:17184179-17183878 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
86-231
               

               
Cow position:
               
chr21:27409478-27409633 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
32, 110
               

               
Conread position:
               
87-240
               

               
Cow position:
               
chr21:30848689-30848851 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
35, 0
               

               
Conread position:
               
87-248
               

               
Cow position:
               
chr21:6998200-6998030 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
35, 165
               

               
Conread position:
               
87-249
               

               
Cow position:
               
chr21:12298846-12298674 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
35, 0
               

               
Conread position:
               
87-253
               

               
Cow position:
               
chr21:46451713-46451876 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
87-308
               

               
Cow position:
               
chr21:36508489-36508240 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
31, 0
               

               
Conread position:
               
87-336
               

               
Cow position:
               
chr21:31159645-31159373 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
38, 137
               

               
Conread position:
               
87-341
               

               
Cow position:
               
chr21:44860881-44861145 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
65, 28
               

               
Conread position:
               
87-351
               

               
Cow position:
               
chr21:1059317-1059034 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
8e-37
               

               
Alignm gaps (pig, cow):
               
68, 27
               

               
Conread position:
               
87-353
               

               
Cow position:
               
chr21:15543980-15544264 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
30, 0
               

               
Conread position:
               
87-353
               

               
Cow position:
               
chr21:38901022-38900732 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
35, 126
               

               
Conread position:
               
87-355
               

               
Cow position:
               
chr21:10823799-10823519 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
150, 35
               

               
Conread position:
               
87-355
               

               
Cow position:
               
chr21:12461710-12462018 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
87-355
               

               
Cow position:
               
chr21:20759714-20759983 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
35, 59
               

               
Conread position:
               
87-355
               

               
Cow position:
               
chr21:27521083-27521379 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
35, 16
               

               
Conread position:
               
87-355
               

               
Cow position:
               
chr21:34738830-34738562 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
8e-37
               

               
Alignm gaps (pig, cow):
               
37, 155
               

               
Conread position:
               
88-212
               

               
Cow position:
               
chr21:38867120-38867249 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
130
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
29, 0
               

               
Conread position:
               
88-250
               

               
Cow position:
               
chr21:16152698-16152521 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
35, 175
               

               
Conread position:
               
89-231
               

               
Cow position:
               
chr21:32536648-32536495 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
95-354
               

               
Cow position:
               
chr21:14760808-14760527 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
30, 244
               

               
Conread position:
               
97-247
               

               
Cow position:
               
chr21:2294261-2294109 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
26, 142
               

               
Conread position:
               
98-240
               

               
Cow position:
               
chr21:13225947-13225805 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
25, 9
               

               
Conread position:
               
106-253
               

               
Cow position:
               
chr21:6735960-6736111 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
44, 6
               

               
Conread position:
               
131-354
               

               
Cow position:
               
chr21:949512-949722 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
21, 73
               

               
Conread position:
               
137-247
               

               
Cow position:
               
chr21:29418761-29418652 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
111
               

               
Alignm identity:
               
93
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
100, 0
               

               
Conread position:
               
137-333
               

               
Cow position:
               
chr21:10538062-10538276 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
96, 192
               

               
Conread position:
               
137-355
               

               
Cow position:
               
chr21:10004693-10004935 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
86, 0
               

               
Conread position:
               
137-355
               

               
Cow position:
               
chr21:18790373-18790607 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
90, 74
               

               
Conread position:
               
137-355
               

               
Cow position:
               
chr21:27810580-27810360 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
99, 95
               

               
Conread position:
               
137-355
               

               
Cow position:
               
chr21:37014235-37014450 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
117, 65
               

               
Conread position:
               
138-248
               

               
Cow position:
               
chr21:37361049-37361161 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
113
               

               
Alignm identity:
               
91
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
7, 0
               

               
Conread position:
               
139-350
               

               
Cow position:
               
chr21:15976823-15976591 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
90, 61
               

               
Conread position:
               
144-222
               

               
Cow position:
               
chr21:31258652-31258574 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
79
               

               
Alignm identity:
               
71
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
144-248
               

               
Cow position:
               
chr21:713129-713025 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
106
               

               
Alignm identity:
               
89
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
73, 99
               

               
Conread position:
               
144-248
               

               
Cow position:
               
chr21:42017417-42017520 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
105
               

               
Alignm identity:
               
87
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
98, 0
               

               
Conread position:
               
144-305
               

               
Cow position:
               
chr21:7686626-7686788 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
105, 96
               

               
Conread position:
               
144-310
               

               
Cow position:
               
chr21:8545837-8546021 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
93, 0
               

               
Conread position:
               
144-336
               

               
Cow position:
               
chr21:42905212-42905405 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
93, 123
               

               
Conread position:
               
144-351
               

               
Cow position:
               
chr21:18471757-18471545 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
89, 142
               

               
Conread position:
               
144-352
               

               
Cow position:
               
chr21:33905-33676 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
82, 0
               

               
Conread position:
               
144-353
               

               
Cow position:
               
chr21:33563189-33562968 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
93, 72
               

               
Conread position:
               
144-353
               

               
Cow position:
               
chr21:47763932-47764161 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
98, 48
               

               
Conread position:
               
144-354
               

               
Cow position:
               
chr21:976955-977191 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
43, 230
               

               
Conread position:
               
144-354
               

               
Cow position:
               
chr21:19514039-19513818 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
54, 125
               

               
Conread position:
               
144-355
               

               
Cow position:
               
chr21:10410408-10410172 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
80, 135
               

               
Conread position:
               
144-355
               

               
Cow position:
               
chr21:11706581-11706793 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
81, 131
               

               
Conread position:
               
144-355
               

               
Cow position:
               
chr21:19059908-19060135 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
85, 9
               

               
Conread position:
               
144-355
               

               
Cow position:
               
chr21:27429637-27429418 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
71, 171
               

               
Conread position:
               
144-355
               

               
Cow position:
               
chr21:29979583-29979804 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
25, 171
               

               
Conread position:
               
144-355
               

               
Cow position:
               
chr21:34049703-34049927 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
84, 165
               

               
Conread position:
               
144-355
               

               
Cow position:
               
chr21:41597997-41597773 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
89, 147
               

               
Conread position:
               
144-355
               

               
Cow position:
               
chr21:49699854-49700082 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
93, 172
               

               
Conread position:
               
145-252
               

               
Cow position:
               
chr21:37706230-37706338 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
109
               

               
Alignm identity:
               
90
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
88, 0
               

               
Conread position:
               
145-349
               

               
Cow position:
               
chr21:17285265-17285070 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
108, 41
               

               
Conread position:
               
146-248
               

               
Cow position:
               
chr21:40475682-40475581 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
103
               

               
Alignm identity:
               
86
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
96, 0
               

               
Conread position:
               
146-344
               

               
Cow position:
               
chr21:20160860-20160641 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
87, 0
               

               
Conread position:
               
146-353
               

               
Cow position:
               
chr21:15584235-15584466 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
87, 0
               

               
Conread position:
               
147-231
               

               
Cow position:
               
chr21:8686960-8687044 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
85
               

               
Alignm identity:
               
76
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
148-341
               

               
Cow position:
               
chr21:734771-734562 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
86, 65
               

               
Conread position:
               
148-355
               

               
Cow position:
               
chr21:3818390-3818161 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
86, 40
               

               
Conread position:
               
148-355
               

               
Cow position:
               
chr21:13898347-13898137 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
124, 74
               

               
Conread position:
               
149-250
               

               
Cow position:
               
chr21:48478719-48478819 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
103
               

               
Alignm identity:
               
88
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
88, 36
               

               
Conread position:
               
149-351
               

               
Cow position:
               
chr21:11360207-11359995 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
44, 172
               

               
Conread position:
               
149-351
               

               
Cow position:
               
chr21:42384690-42384466 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
149-353
               

               
Cow position:
               
chr21:11779361-11779575 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
84, 58
               

               
Conread position:
               
149-353
               

               
Cow position:
               
chr21:26245095-26244874 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
85, 181
               

               
Conread position:
               
149-355
               

               
Cow position:
               
chr21:396048-395822 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
84, 0
               

               
Conread position:
               
149-355
               

               
Cow position:
               
chr21:10001256-10001027 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
74, 0
               

               
Conread position:
               
149-355
               

               
Cow position:
               
chr21:28924291-28924067 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
9, 193
               

               
Conread position:
               
149-355
               

               
Cow position:
               
chr21:47713829-47714051 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
91, 23
               

               
Conread position:
               
150-353
               

               
Cow position:
               
chr21:30606916-30607135 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
43, 36
               

               
Conread position:
               
150-355
               

               
Cow position:
               
chr21:21169316-21169541 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
90, 0
               

               
Conread position:
               
150-355
               

               
Cow position:
               
chr21:24642692-24642472 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
47, 38
               

               
Conread position:
               
152-353
               

               
Cow position:
               
chr21:21077487-21077280 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
99, 74
               

               
Conread position:
               
153-348
               

               
Cow position:
               
chr21:22210070-22210285 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
80, 8
               

               
Conread position:
               
153-352
               

               
Cow position:
               
chr21:18779799-18780016 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
77, 0
               

               
Conread position:
               
156-353
               

               
Cow position:
               
chr21:38267888-38268085 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
85, 149
               

               
Conread position:
               
156-354
               

               
Cow position:
               
chr21:8235388-8235601 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
77, 0
               

               
Conread position:
               
159-355
               

               
Cow position:
               
chr21:47363563-47363786 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
72, 0
               

               
Conread position:
               
160-355
               

               
Cow position:
               
chr21:28955671-28955460 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
71, 0
               

               
Conread position:
               
160-355
               

               
Cow position:
               
chr21:31253703-31253496 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
63, 0
               

               
Conread position:
               
160-355
               

               
Cow position:
               
chr21:34659178-34658986 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
86, 76
               

               
Conread position:
               
162-355
               

               
Cow position:
               
chr21:32237447-32237247 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
71, 0
               

               
Conread position:
               
165-348
               

               
Cow position:
               
chr21:19258983-19258789 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
75, 173
               

               
Conread position:
               
175-353
               

               
Cow position:
               
chr21:39401745-39401548 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
59, 37
               

               
Conread position:
               
175-355
               

               
Cow position:
               
chr21:13738707-13738520 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
58, 13
               

               
Conread position:
               
181-355
               

               
Cow position:
               
chr21:34390826-34391023 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
52, 0
               

               
Conread position:
               
181-355
               

               
Cow position:
               
chr21:40432594-40432402 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
52, 140
               

               
Conread position:
               
189-355
               

               
Cow position:
               
chr21:11251010-11250831 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
229-355
               

               
Cow position:
               
chr21:33359949-33360081 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
134
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
25, 8
               

               
Conread position:
               
232-352
               

               
Cow position:
               
chr21:10727360-10727232 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
129
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
232-353
               

               
Cow position:
               
chr21:41878554-41878425 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
130
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
233-352
               

               
Cow position:
               
chr21:39450079-39450208 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
130
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
233-355
               

               
Cow position:
               
chr21:24765364-24765242 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
124
               

               
Alignm identity:
               
97
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
21, 15
               

               
Conread position:
               
233-355
               

               
Cow position:
               
chr21:28882217-28882087 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
132
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
44, 13
               

               
Conread position:
               
234-355
               

               
Cow position:
               
chr21:5636642-5636766 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
125
               

               
Alignm identity:
               
99
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
240-355
               

               
Cow position:
               
chr21:7391202-7391324 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
123
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
14, 0
               
Show alignments to all cow chromosomes.