• Home
• Research
• Resources
• Publications
• About
• People
• Events
• Jobs
• News
• Contact

Cow genome map

           
Conread name:
           
rcki29_p3.y1
        

               
Conread position:
               
71-244
               

               
Cow position:
               
chr22:14236695-14236877 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
14, 74
               

               
Conread position:
               
71-250
               

               
Cow position:
               
chr22:29219693-29219889 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
16, 147
               

               
Conread position:
               
71-355
               

               
Cow position:
               
chr22:15668273-15668588 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
72-284
               

               
Cow position:
               
chr22:23675766-23676000 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
50, 0
               

               
Conread position:
               
73-248
               

               
Cow position:
               
chr22:4563562-4563376 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
41, 0
               

               
Conread position:
               
73-352
               

               
Cow position:
               
chr22:29961945-29962258 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
49, 0
               

               
Conread position:
               
73-353
               

               
Cow position:
               
chr22:4135799-4135505 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
49, 143
               

               
Conread position:
               
73-355
               

               
Cow position:
               
chr22:12829403-12829726 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
19, 129
               

               
Conread position:
               
74-231
               

               
Cow position:
               
chr22:34609201-34609036 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
77, 48
               

               
Conread position:
               
74-349
               

               
Cow position:
               
chr22:33522671-33522974 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
10, 291
               

               
Conread position:
               
74-355
               

               
Cow position:
               
chr22:23735806-23736126 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
13, 287
               

               
Conread position:
               
75-236
               

               
Cow position:
               
chr22:15695529-15695698 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
47, 0
               

               
Conread position:
               
75-324
               

               
Cow position:
               
chr22:24583868-24584137 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
48, 238
               

               
Conread position:
               
75-355
               

               
Cow position:
               
chr22:25221701-25222014 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
47, 11
               

               
Conread position:
               
76-220
               

               
Cow position:
               
chr22:17897876-17897725 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
76-350
               

               
Cow position:
               
chr22:25247112-25246806 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
46, 284
               

               
Conread position:
               
76-354
               

               
Cow position:
               
chr22:10122571-10122277 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
63, 259
               

               
Conread position:
               
77-235
               

               
Cow position:
               
chr22:2201936-2201768 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
45, 29
               

               
Conread position:
               
77-235
               

               
Cow position:
               
chr22:9977996-9977838 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
65, 84
               

               
Conread position:
               
77-240
               

               
Cow position:
               
chr22:43730485-43730309 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
10, 170
               

               
Conread position:
               
77-248
               

               
Cow position:
               
chr22:27401935-27401753 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
41, 177
               

               
Conread position:
               
78-230
               

               
Cow position:
               
chr22:10295229-10295069 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
43, 142
               

               
Conread position:
               
78-244
               

               
Cow position:
               
chr22:27681925-27681740 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
44, 0
               

               
Conread position:
               
78-253
               

               
Cow position:
               
chr22:25742764-25742940 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
10, 70
               

               
Conread position:
               
78-354
               

               
Cow position:
               
chr22:8412732-8412414 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
7, 0
               

               
Conread position:
               
81-232
               

               
Cow position:
               
chr22:19549039-19548886 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
81-235
               

               
Cow position:
               
chr22:21041957-21042118 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
73, 25
               

               
Conread position:
               
81-240
               

               
Cow position:
               
chr22:1074465-1074288 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
41, 175
               

               
Conread position:
               
81-240
               

               
Cow position:
               
chr22:40072159-40072000 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
43, 11
               

               
Conread position:
               
81-245
               

               
Cow position:
               
chr22:26945373-26945543 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
42, 0
               

               
Conread position:
               
81-248
               

               
Cow position:
               
chr22:12447646-12447472 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
41, 67
               

               
Conread position:
               
81-248
               

               
Cow position:
               
chr22:30687216-30687042 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
44, 7
               

               
Conread position:
               
81-345
               

               
Cow position:
               
chr22:24732363-24732655 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
43, 0
               

               
Conread position:
               
81-349
               

               
Cow position:
               
chr22:33485427-33485711 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
37, 161
               

               
Conread position:
               
81-352
               

               
Cow position:
               
chr22:27828576-27828272 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
5, 0
               

               
Conread position:
               
81-355
               

               
Cow position:
               
chr22:5016688-5016398 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
42, 194
               

               
Conread position:
               
82-231
               

               
Cow position:
               
chr22:5712781-5712618 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
28, 0
               

               
Conread position:
               
82-354
               

               
Cow position:
               
chr22:7154072-7153772 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
40, 0
               

               
Conread position:
               
82-355
               

               
Cow position:
               
chr22:4075688-4076004 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
40, 0
               

               
Conread position:
               
82-355
               

               
Cow position:
               
chr22:7913651-7913365 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
40, 157
               

               
Conread position:
               
82-355
               

               
Cow position:
               
chr22:21905665-21905378 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
35, 105
               

               
Conread position:
               
82-355
               

               
Cow position:
               
chr22:27171072-27171370 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
41, 0
               

               
Conread position:
               
82-355
               

               
Cow position:
               
chr22:43398196-43397898 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
40, 0
               

               
Conread position:
               
83-230
               

               
Cow position:
               
chr22:4054407-4054559 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
40, 0
               

               
Conread position:
               
83-230
               

               
Cow position:
               
chr22:4656850-4657010 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
83-230
               

               
Cow position:
               
chr22:20035015-20034862 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
33, 91
               

               
Conread position:
               
83-231
               

               
Cow position:
               
chr22:12313615-12313457 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
39, 133
               

               
Conread position:
               
83-231
               

               
Cow position:
               
chr22:38939756-38939908 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
39, 139
               

               
Conread position:
               
83-232
               

               
Cow position:
               
chr22:12741086-12741241 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
6, 97
               

               
Conread position:
               
83-239
               

               
Cow position:
               
chr22:35029455-35029293 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
39, 131
               

               
Conread position:
               
83-240
               

               
Cow position:
               
chr22:23630160-23630328 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
36, 136
               

               
Conread position:
               
83-240
               

               
Cow position:
               
chr22:28672330-28672168 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
39, 16
               

               
Conread position:
               
83-243
               

               
Cow position:
               
chr22:11836878-11837042 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
39, 90
               

               
Conread position:
               
83-245
               

               
Cow position:
               
chr22:10913854-10913682 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
35, 0
               

               
Conread position:
               
83-247
               

               
Cow position:
               
chr22:16564341-16564164 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
39, 113
               

               
Conread position:
               
83-247
               

               
Cow position:
               
chr22:27275661-27275477 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
83-248
               

               
Cow position:
               
chr22:4736222-4736039 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
39, 178
               

               
Conread position:
               
83-248
               

               
Cow position:
               
chr22:12777188-12777361 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
39, 168
               

               
Conread position:
               
83-248
               

               
Cow position:
               
chr22:16346589-16346410 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
83-250
               

               
Cow position:
               
chr22:11049509-11049327 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
34, 173
               

               
Conread position:
               
83-254
               

               
Cow position:
               
chr22:11147105-11146927 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
69, 132
               

               
Conread position:
               
83-273
               

               
Cow position:
               
chr22:39622723-39622526 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
69, 25
               

               
Conread position:
               
83-286
               

               
Cow position:
               
chr22:37145516-37145288 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
35, 0
               

               
Conread position:
               
83-326
               

               
Cow position:
               
chr22:12749717-12749985 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
35, 245
               

               
Conread position:
               
83-335
               

               
Cow position:
               
chr22:25809085-25809365 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
39, 95
               

               
Conread position:
               
83-336
               

               
Cow position:
               
chr22:5595612-5595904 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
39, 273
               

               
Conread position:
               
83-340
               

               
Cow position:
               
chr22:1065303-1065023 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
38, 214
               

               
Conread position:
               
83-343
               

               
Cow position:
               
chr22:40864683-40864422 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
11, 76
               

               
Conread position:
               
83-351
               

               
Cow position:
               
chr22:8447103-8446828 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
44, 168
               

               
Conread position:
               
83-351
               

               
Cow position:
               
chr22:22908364-22908083 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
28, 52
               

               
Conread position:
               
83-351
               

               
Cow position:
               
chr22:25629619-25629873 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
171, 42
               

               
Conread position:
               
83-352
               

               
Cow position:
               
chr22:8090339-8090640 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
83-352
               

               
Cow position:
               
chr22:40387347-40387048 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
39, 249
               

               
Conread position:
               
83-353
               

               
Cow position:
               
chr22:2524146-2523851 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
39, 70
               

               
Conread position:
               
83-353
               

               
Cow position:
               
chr22:8883206-8882906 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
34, 266
               

               
Conread position:
               
83-353
               

               
Cow position:
               
chr22:21746834-21746530 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
39, 108
               

               
Conread position:
               
83-353
               

               
Cow position:
               
chr22:29954818-29955112 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
13, 198
               

               
Conread position:
               
83-353
               

               
Cow position:
               
chr22:40374802-40374495 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
39, 92
               

               
Conread position:
               
83-353
               

               
Cow position:
               
chr22:42685078-42684794 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
39, 132
               

               
Conread position:
               
83-354
               

               
Cow position:
               
chr22:41854098-41853786 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
83-355
               

               
Cow position:
               
chr22:1309542-1309843 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
29, 41
               

               
Conread position:
               
83-355
               

               
Cow position:
               
chr22:8733150-8733446 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
39, 261
               

               
Conread position:
               
83-355
               

               
Cow position:
               
chr22:9372722-9372408 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
39, 270
               

               
Conread position:
               
83-355
               

               
Cow position:
               
chr22:10293127-10292850 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
171, 32
               

               
Conread position:
               
83-355
               

               
Cow position:
               
chr22:12316004-12315697 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
11, 140
               

               
Conread position:
               
83-355
               

               
Cow position:
               
chr22:16291737-16292032 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
39, 280
               

               
Conread position:
               
83-355
               

               
Cow position:
               
chr22:21568187-21567882 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
41, 127
               

               
Conread position:
               
83-355
               

               
Cow position:
               
chr22:22860715-22861024 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
83-355
               

               
Cow position:
               
chr22:25943655-25943362 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
149, 237
               

               
Conread position:
               
83-355
               

               
Cow position:
               
chr22:27322494-27322203 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
67, 32
               

               
Conread position:
               
83-355
               

               
Cow position:
               
chr22:28937746-28938013 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
39, 100
               

               
Conread position:
               
83-355
               

               
Cow position:
               
chr22:34895152-34894857 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
35, 62
               

               
Conread position:
               
84-351
               

               
Cow position:
               
chr22:14142929-14143223 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
38, 118
               

               
Conread position:
               
84-353
               

               
Cow position:
               
chr22:14372362-14372073 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 235
               

               
Conread position:
               
84-355
               

               
Cow position:
               
chr22:534684-534384 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
85-227
               

               
Cow position:
               
chr22:11790180-11790019 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
85-235
               

               
Cow position:
               
chr22:6359999-6360156 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
85-248
               

               
Cow position:
               
chr22:3282635-3282806 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
37, 99
               

               
Conread position:
               
85-353
               

               
Cow position:
               
chr22:1911844-1911557 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
71, 276
               

               
Conread position:
               
86-231
               

               
Cow position:
               
chr22:5467172-5467320 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
35, 70
               

               
Conread position:
               
86-286
               

               
Cow position:
               
chr22:8540068-8539849 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
30, 209
               

               
Conread position:
               
86-352
               

               
Cow position:
               
chr22:6622058-6622356 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
32, 130
               

               
Conread position:
               
87-228
               

               
Cow position:
               
chr22:23249545-23249692 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
36, 0
               

               
Conread position:
               
87-248
               

               
Cow position:
               
chr22:44684667-44684503 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
56, 118
               

               
Conread position:
               
87-250
               

               
Cow position:
               
chr22:13769644-13769487 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
146, 37
               

               
Conread position:
               
87-251
               

               
Cow position:
               
chr22:1830235-1830061 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
36, 166
               

               
Conread position:
               
87-305
               

               
Cow position:
               
chr22:8287372-8287126 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
35, 0
               

               
Conread position:
               
87-344
               

               
Cow position:
               
chr22:21205495-21205237 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
37, 62
               

               
Conread position:
               
87-354
               

               
Cow position:
               
chr22:20627025-20626727 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
35, 267
               

               
Conread position:
               
87-354
               

               
Cow position:
               
chr22:37202040-37201740 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
35, 101
               

               
Conread position:
               
88-217
               

               
Cow position:
               
chr22:21943736-21943609 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
131
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
6, 34
               

               
Conread position:
               
88-331
               

               
Cow position:
               
chr22:3470480-3470211 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
88-336
               

               
Cow position:
               
chr22:530387-530662 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
34, 268
               

               
Conread position:
               
89-349
               

               
Cow position:
               
chr22:10532683-10532400 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
95-248
               

               
Cow position:
               
chr22:16724504-16724671 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
27, 162
               

               
Conread position:
               
95-342
               

               
Cow position:
               
chr22:17126631-17126355 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
28, 0
               

               
Conread position:
               
95-352
               

               
Cow position:
               
chr22:9597401-9597691 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
8e-37
               

               
Alignm gaps (pig, cow):
               
27, 283
               

               
Conread position:
               
103-271
               

               
Cow position:
               
chr22:3945533-3945354 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
19, 68
               

               
Conread position:
               
103-325
               

               
Cow position:
               
chr22:10553523-10553770 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
40, 0
               

               
Conread position:
               
108-353
               

               
Cow position:
               
chr22:12967918-12968182 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
44, 16
               

               
Conread position:
               
113-307
               

               
Cow position:
               
chr22:13878326-13878117 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
116, 25
               

               
Conread position:
               
116-352
               

               
Cow position:
               
chr22:5282645-5282398 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
7, 154
               

               
Conread position:
               
123-353
               

               
Cow position:
               
chr22:18218777-18219000 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
161, 18
               

               
Conread position:
               
125-355
               

               
Cow position:
               
chr22:24734185-24734427 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
106, 13
               

               
Conread position:
               
126-354
               

               
Cow position:
               
chr22:13687964-13688216 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
131-355
               

               
Cow position:
               
chr22:16251440-16251680 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
8, 0
               

               
Conread position:
               
133-355
               

               
Cow position:
               
chr22:3534063-3533829 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
96, 144
               

               
Conread position:
               
134-355
               

               
Cow position:
               
chr22:43291775-43292011 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
94, 7
               

               
Conread position:
               
137-227
               

               
Cow position:
               
chr22:15737360-15737270 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
91
               

               
Alignm identity:
               
77
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
137-248
               

               
Cow position:
               
chr22:2704424-2704314 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
112
               

               
Alignm identity:
               
90
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
105, 0
               

               
Conread position:
               
137-248
               

               
Cow position:
               
chr22:3301213-3301325 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
113
               

               
Alignm identity:
               
89
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
108, 0
               

               
Conread position:
               
137-352
               

               
Cow position:
               
chr22:34726791-34726563 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
23, 59
               

               
Conread position:
               
137-353
               

               
Cow position:
               
chr22:3965312-3965073 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
100, 0
               

               
Conread position:
               
137-354
               

               
Cow position:
               
chr22:16621307-16621062 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
35, 0
               

               
Conread position:
               
137-354
               

               
Cow position:
               
chr22:23857173-23856935 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
17, 139
               

               
Conread position:
               
137-355
               

               
Cow position:
               
chr22:3950378-3950137 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
91, 0
               

               
Conread position:
               
137-355
               

               
Cow position:
               
chr22:16044290-16044534 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
96, 0
               

               
Conread position:
               
137-355
               

               
Cow position:
               
chr22:24175772-24175996 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
94, 11
               

               
Conread position:
               
137-355
               

               
Cow position:
               
chr22:27274574-27274806 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
96, 132
               

               
Conread position:
               
137-355
               

               
Cow position:
               
chr22:33447955-33448196 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
96, 0
               

               
Conread position:
               
143-293
               

               
Cow position:
               
chr22:6486082-6485932 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
94, 108
               

               
Conread position:
               
143-344
               

               
Cow position:
               
chr22:1529068-1529272 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
130, 30
               

               
Conread position:
               
143-355
               

               
Cow position:
               
chr22:14924612-14924847 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
90, 0
               

               
Conread position:
               
144-227
               

               
Cow position:
               
chr22:1106186-1106103 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
84
               

               
Alignm identity:
               
75
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
144-231
               

               
Cow position:
               
chr22:23265533-23265620 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
88
               

               
Alignm identity:
               
76
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
144-247
               

               
Cow position:
               
chr22:26107239-26107135 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
105
               

               
Alignm identity:
               
85
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
93, 0
               

               
Conread position:
               
144-248
               

               
Cow position:
               
chr22:23398285-23398388 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
105
               

               
Alignm identity:
               
92
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
98, 0
               

               
Conread position:
               
144-252
               

               
Cow position:
               
chr22:25312628-25312521 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
109
               

               
Alignm identity:
               
91
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
98, 0
               

               
Conread position:
               
144-252
               

               
Cow position:
               
chr22:29389898-29389789 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
110
               

               
Alignm identity:
               
89
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
97, 0
               

               
Conread position:
               
144-275
               

               
Cow position:
               
chr22:44384384-44384522 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
85, 0
               

               
Conread position:
               
144-305
               

               
Cow position:
               
chr22:13719913-13720087 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
93, 168
               

               
Conread position:
               
144-333
               

               
Cow position:
               
chr22:8331117-8330936 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
100, 112
               

               
Conread position:
               
144-351
               

               
Cow position:
               
chr22:4535211-4535434 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
89, 29
               

               
Conread position:
               
144-353
               

               
Cow position:
               
chr22:3252840-3253060 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
60, 28
               

               
Conread position:
               
144-353
               

               
Cow position:
               
chr22:24610974-24611193 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
8, 54
               

               
Conread position:
               
144-353
               

               
Cow position:
               
chr22:25764376-25764596 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
89, 73
               

               
Conread position:
               
144-355
               

               
Cow position:
               
chr22:6852466-6852698 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
89, 14
               

               
Conread position:
               
144-355
               

               
Cow position:
               
chr22:12389218-12388982 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
5.00264e-43
               

               
Alignm gaps (pig, cow):
               
89, 0
               

               
Conread position:
               
144-355
               

               
Cow position:
               
chr22:14378576-14378794 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
17, 190
               

               
Conread position:
               
144-355
               

               
Cow position:
               
chr22:15024991-15025224 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
82, 0
               

               
Conread position:
               
144-355
               

               
Cow position:
               
chr22:15959658-15959883 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
81, 123
               

               
Conread position:
               
144-355
               

               
Cow position:
               
chr22:16339974-16339767 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
129, 98
               

               
Conread position:
               
144-355
               

               
Cow position:
               
chr22:18926475-18926240 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
89, 186
               

               
Conread position:
               
144-355
               

               
Cow position:
               
chr22:26659160-26658940 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
97, 14
               

               
Conread position:
               
144-355
               

               
Cow position:
               
chr22:29642228-29642000 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
73, 190
               

               
Conread position:
               
144-355
               

               
Cow position:
               
chr22:32698879-32698649 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
6.02558e-44
               

               
Alignm gaps (pig, cow):
               
89, 174
               

               
Conread position:
               
144-355
               

               
Cow position:
               
chr22:45513410-45513629 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
89, 80
               

               
Conread position:
               
145-355
               

               
Cow position:
               
chr22:3960187-3960398 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
60, 28
               

               
Conread position:
               
145-355
               

               
Cow position:
               
chr22:32651609-32651389 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
70, 20
               

               
Conread position:
               
146-253
               

               
Cow position:
               
chr22:2627697-2627592 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
108
               

               
Alignm identity:
               
90
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
96, 0
               

               
Conread position:
               
146-332
               

               
Cow position:
               
chr22:2409015-2409212 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
95, 182
               

               
Conread position:
               
146-353
               

               
Cow position:
               
chr22:34712842-34712611 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
87, 34
               

               
Conread position:
               
146-355
               

               
Cow position:
               
chr22:15020296-15020511 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
71, 96
               

               
Conread position:
               
148-355
               

               
Cow position:
               
chr22:24628543-24628764 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
84, 0
               

               
Conread position:
               
148-355
               

               
Cow position:
               
chr22:31510263-31510483 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
59, 158
               

               
Conread position:
               
149-318
               

               
Cow position:
               
chr22:10533707-10533515 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
82, 0
               

               
Conread position:
               
149-333
               

               
Cow position:
               
chr22:23750783-23750986 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
78, 0
               

               
Conread position:
               
149-348
               

               
Cow position:
               
chr22:3842731-3842510 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
149-354
               

               
Cow position:
               
chr22:27066492-27066278 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
129, 90
               

               
Conread position:
               
150-318
               

               
Cow position:
               
chr22:45505892-45506083 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
83, 172
               

               
Conread position:
               
150-354
               

               
Cow position:
               
chr22:23176328-23176551 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
83, 166
               

               
Conread position:
               
150-355
               

               
Cow position:
               
chr22:26316569-26316356 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
5.00264e-43
               

               
Alignm gaps (pig, cow):
               
91, 0
               

               
Conread position:
               
151-245
               

               
Cow position:
               
chr22:1728343-1728248 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
96
               

               
Alignm identity:
               
81
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
86, 0
               

               
Conread position:
               
151-354
               

               
Cow position:
               
chr22:15914940-15915156 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
80, 20
               

               
Conread position:
               
151-355
               

               
Cow position:
               
chr22:16823202-16822988 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
53, 0
               

               
Conread position:
               
151-355
               

               
Cow position:
               
chr22:44180705-44180477 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
82, 205
               

               
Conread position:
               
152-354
               

               
Cow position:
               
chr22:13286559-13286337 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
152-355
               

               
Cow position:
               
chr22:877626-877399 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
86, 0
               

               
Conread position:
               
153-344
               

               
Cow position:
               
chr22:27047303-27047508 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
84, 0
               

               
Conread position:
               
153-350
               

               
Cow position:
               
chr22:3264148-3264357 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
58, 36
               

               
Conread position:
               
153-354
               

               
Cow position:
               
chr22:10323990-10323789 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
130, 89
               

               
Conread position:
               
153-354
               

               
Cow position:
               
chr22:23855080-23854860 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
78, 36
               

               
Conread position:
               
153-355
               

               
Cow position:
               
chr22:22553150-22553349 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
101, 26
               

               
Conread position:
               
153-355
               

               
Cow position:
               
chr22:26421821-26422026 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
47, 130
               

               
Conread position:
               
153-355
               

               
Cow position:
               
chr22:28057940-28058167 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
79, 0
               

               
Conread position:
               
154-353
               

               
Cow position:
               
chr22:46567785-46568001 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
83, 33
               

               
Conread position:
               
154-355
               

               
Cow position:
               
chr22:28665392-28665171 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
79, 0
               

               
Conread position:
               
156-349
               

               
Cow position:
               
chr22:38980993-38980788 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
78, 17
               

               
Conread position:
               
162-355
               

               
Cow position:
               
chr22:12946081-12946281 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
60, 126
               

               
Conread position:
               
186-355
               

               
Cow position:
               
chr22:20687362-20687189 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
10, 24
               

               
Conread position:
               
219-355
               

               
Cow position:
               
chr22:26969812-26969669 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
35, 88
               

               
Conread position:
               
232-355
               

               
Cow position:
               
chr22:6122888-6123015 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
130
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
26, 91
               

               
Conread position:
               
232-355
               

               
Cow position:
               
chr22:27681733-27681601 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
133
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
235-352
               

               
Cow position:
               
chr22:5042327-5042206 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
122
               

               
Alignm identity:
               
96
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
240-346
               

               
Cow position:
               
chr22:11497209-11497094 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
116
               

               
Alignm identity:
               
97
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
240-355
               

               
Cow position:
               
chr22:10363076-10362955 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
122
               

               
Alignm identity:
               
99
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
240-355
               

               
Cow position:
               
chr22:25342024-25341906 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
121
               

               
Alignm identity:
               
98
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
34, 73
               

               
Conread position:
               
242-355
               

               
Cow position:
               
chr22:16917205-16917317 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
115
               

               
Alignm identity:
               
92
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
12, 38
               

               
Conread position:
               
273-355
               

               
Cow position:
               
chr22:5467400-5467483 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
84
               

               
Alignm identity:
               
77
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
57, 0
               

               
Conread position:
               
277-355
               

               
Cow position:
               
chr22:3945139-3945061 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
79
               

               
Alignm identity:
               
71
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
277-355
               

               
Cow position:
               
chr22:41044948-41045026 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
79
               

               
Alignm identity:
               
71
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               
Show alignments to all cow chromosomes.