Cow genome map

Conread name: rcki29_p3.y1

Conread position: 66-248
Cow position: chr26:25407615-25407428 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 147
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 22, 140

Conread position: 72-353
Cow position: chr26:4421295-4421592 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 201
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 16, 136

Conread position: 73-240
Cow position: chr26:21822821-21823002 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 139
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 14, 0

Conread position: 73-355
Cow position: chr26:31633957-31633634 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 239
Alignm E-value: 8e-40
Alignm gaps (pig, cow): 49, 0

Conread position: 75-230
Cow position: chr26:11884510-11884353 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 127
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 48, 15

Conread position: 75-253
Cow position: chr26:20291469-20291661 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 141
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 52, 182

Conread position: 75-355
Cow position: chr26:16550212-16549890 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 234
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 11, 0

Conread position: 75-355
Cow position: chr26:25737670-25737379 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 214
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 14, 127

Conread position: 76-248
Cow position: chr26:5666263-5666084 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 132
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 38, 174

Conread position: 76-352
Cow position: chr26:2986868-2987167 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 207
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 46, 72

Conread position: 76-355
Cow position: chr26:21243310-21243007 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 0

Conread position: 77-232
Cow position: chr26:9535735-9535569 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 129
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 40, 137

Conread position: 82-352
Cow position: chr26:830433-830713 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 209
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 35, 211

Conread position: 83-227
Cow position: chr26:28618-28775 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 122
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 39, 0

Conread position: 83-230
Cow position: chr26:5407195-5407032 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 124
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 35, 0

Conread position: 83-231
Cow position: chr26:7224138-7224290 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 123
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 39, 75

Conread position: 83-231
Cow position: chr26:8478663-8478820 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 121
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 31, 0

Conread position: 83-235
Cow position: chr26:21636836-21636989 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 113
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 55, 92

Conread position: 83-238
Cow position: chr26:1894166-1894331 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 131
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 39, 138

Conread position: 83-240
Cow position: chr26:31382530-31382363 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 128
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 39, 0

Conread position: 83-245
Cow position: chr26:26048306-26048465 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 125
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 57, 32

Conread position: 83-248
Cow position: chr26:9099318-9099496 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 140
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 37, 173

Conread position: 83-249
Cow position: chr26:34314894-34314726 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 134
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 35, 79

Conread position: 83-253
Cow position: chr26:3192232-3192414 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 136
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 35, 115

Conread position: 83-253
Cow position: chr26:12807090-12807269 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 141
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 33, 100

Conread position: 83-353
Cow position: chr26:35449271-35448967 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 223
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 35, 0

Conread position: 83-355
Cow position: chr26:6714083-6714388 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 221
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 39, 0

Conread position: 83-355
Cow position: chr26:12154930-12155212 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 208
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 132, 32

Conread position: 83-355
Cow position: chr26:23096977-23097272 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 213
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 40, 266

Conread position: 84-229
Cow position: chr26:32517253-32517403 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 113
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 33, 0

Conread position: 85-247
Cow position: chr26:28446782-28446618 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 131
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 57, 0

Conread position: 86-253
Cow position: chr26:8341696-8341527 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 125
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 28, 115

Conread position: 86-336
Cow position: chr26:1325954-1325693 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 199
Alignm E-value: 7e-38
Alignm gaps (pig, cow): 29, 37

Conread position: 87-230
Cow position: chr26:13018191-13018336 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 113
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 35, 65

Conread position: 87-235
Cow position: chr26:23106220-23106380 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 123
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 28, 0

Conread position: 87-247
Cow position: chr26:16796001-16796173 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 131
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 36, 162

Conread position: 87-252
Cow position: chr26:16585639-16585465 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 131
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 36, 0

Conread position: 87-344
Cow position: chr26:12893218-12893509 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 219
Alignm E-value: 7e-39
Alignm gaps (pig, cow): 35, 113

Conread position: 87-352
Cow position: chr26:14905605-14905903 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 213
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 35, 0

Conread position: 87-353
Cow position: chr26:6470082-6470365 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 200
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 72, 34

Conread position: 87-355
Cow position: chr26:3071770-3072060 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 212
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 35, 86

Conread position: 87-355
Cow position: chr26:22249278-22249573 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 219
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 35, 87

Conread position: 89-231
Cow position: chr26:26504939-26504787 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 118
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 25, 0

Conread position: 89-355
Cow position: chr26:2994490-2994785 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 202
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 28, 0

Conread position: 89-355
Cow position: chr26:13828264-13827978 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 219
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 64, 26

Conread position: 93-352
Cow position: chr26:29889309-29889589 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 207
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 30, 208

Conread position: 100-231
Cow position: chr26:18381504-18381365 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 109
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 18, 0

Conread position: 123-248
Cow position: chr26:19774141-19774263 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 104
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 14, 0

Conread position: 137-252
Cow position: chr26:24240825-24240712 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 92
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 97, 0

Conread position: 137-345
Cow position: chr26:32120772-32120556 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 163
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 89, 170

Conread position: 137-352
Cow position: chr26:30254488-30254719 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 171
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 91, 179

Conread position: 137-355
Cow position: chr26:11263785-11263547 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 175
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 23, 85

Conread position: 140-344
Cow position: chr26:3706933-3706711 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 174
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 93, 7

Conread position: 144-231
Cow position: chr26:16166556-16166643 (view UCSC Genome Browser custom track)
Alignm length: 88
Alignm identity: 77
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 144-231
Cow position: chr26:28202620-28202707 (view UCSC Genome Browser custom track)
Alignm length: 88
Alignm identity: 77
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 144-238
Cow position: chr26:9501847-9501753 (view UCSC Genome Browser custom track)
Alignm length: 95
Alignm identity: 83
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 144-240
Cow position: chr26:27482427-27482523 (view UCSC Genome Browser custom track)
Alignm length: 97
Alignm identity: 84
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 144-353
Cow position: chr26:32776373-32776600 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 173
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 93, 62

Conread position: 144-353
Cow position: chr26:32834440-32834666 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 175
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 85, 173

Conread position: 144-354
Cow position: chr26:8811266-8811036 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 178
Alignm E-value: 7e-38
Alignm gaps (pig, cow): 89, 0

Conread position: 144-355
Cow position: chr26:4513434-4513657 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 159
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 89, 190

Conread position: 144-355
Cow position: chr26:4807693-4807467 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 181
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 0

Conread position: 144-355
Cow position: chr26:22348873-22349101 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 177
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 69, 192

Conread position: 144-355
Cow position: chr26:22354553-22354319 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 171
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 46, 0

Conread position: 145-240
Cow position: chr26:829943-829848 (view UCSC Genome Browser custom track)
Alignm length: 96
Alignm identity: 83
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 145-247
Cow position: chr26:26245033-26245134 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 87
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 41, 0

Conread position: 145-355
Cow position: chr26:31701950-31701727 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 154
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 88, 0

Conread position: 148-240
Cow position: chr26:7183862-7183954 (view UCSC Genome Browser custom track)
Alignm length: 93
Alignm identity: 78
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 149-248
Cow position: chr26:24453776-24453873 (view UCSC Genome Browser custom track)
Alignm length: 100
Alignm identity: 85
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 83, 0

Conread position: 150-354
Cow position: chr26:27594748-27594538 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 151
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 79, 128

Conread position: 151-248
Cow position: chr26:6865156-6865060 (view UCSC Genome Browser custom track)
Alignm length: 98
Alignm identity: 81
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 91, 0

Conread position: 151-253
Cow position: chr26:25074849-25074748 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 86
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 91, 0

Conread position: 151-352
Cow position: chr26:31462042-31462248 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 156
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 81, 135

Conread position: 151-353
Cow position: chr26:32836371-32836148 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 170
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 82, 0

Conread position: 153-351
Cow position: chr26:8643071-8642854 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 164
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 80, 0

Conread position: 158-355
Cow position: chr26:15200391-15200608 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 173
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 9, 16

Conread position: 163-355
Cow position: chr26:30568543-30568752 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 163
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 82, 0

Conread position: 211-353
Cow position: chr26:18692481-18692331 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 112
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 21, 0

Conread position: 230-350
Cow position: chr26:12807489-12807605 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 99
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 24, 31

Conread position: 232-353
Cow position: chr26:31779518-31779390 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 102
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 22, 111

Conread position: 232-355
Cow position: chr26:21992138-21992008 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 101
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 22, 0

Conread position: 235-351
Cow position: chr26:6724138-6724021 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 100
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 19, 86

Conread position: 240-353
Cow position: chr26:14957991-14958106 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 95
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 14, 0

Conread position: 272-354
Cow position: chr26:19459673-19459592 (view UCSC Genome Browser custom track)
Alignm length: 83
Alignm identity: 77
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 59, 0

Conread position: 277-355
Cow position: chr26:10767928-10768006 (view UCSC Genome Browser custom track)
Alignm length: 79
Alignm identity: 72
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 0, 0

Show alignments to all cow chromosomes.