Cow genome map
| Conread name: | rcki29_p3.y1 |
| Conread position: | 66-250 |
| Cow position: | chr29:21443139-21443323 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 134 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 54, 41 |
| Conread position: | 67-355 |
| Cow position: | chr29:28979301-28979594 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 227 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 21, 59 |
| Conread position: | 69-355 |
| Cow position: | chr29:22777968-22778290 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 231 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 71-229 |
| Cow position: | chr29:7381336-7381495 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 117 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 82, 0 |
| Conread position: | 71-248 |
| Cow position: | chr29:26539441-26539250 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 140 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 50, 0 |
| Conread position: | 71-355 |
| Cow position: | chr29:17297348-17297021 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 236 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 72-231 |
| Cow position: | chr29:32655885-32656059 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 132 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 49, 0 |
| Conread position: | 73-230 |
| Cow position: | chr29:22028753-22028921 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 129 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 40, 0 |
| Conread position: | 73-230 |
| Cow position: | chr29:38775823-38775654 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 126 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 50, 0 |
| Conread position: | 73-355 |
| Cow position: | chr29:17110161-17109855 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 217 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 38, 172 |
| Conread position: | 74-240 |
| Cow position: | chr29:35501458-35501630 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 128 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 57, 0 |
| Conread position: | 74-329 |
| Cow position: | chr29:23812840-23813123 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 202 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 11, 269 |
| Conread position: | 75-230 |
| Cow position: | chr29:4648006-4648175 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 131 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 75-355 |
| Cow position: | chr29:27816542-27816242 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 213 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 68, 247 |
| Conread position: | 76-218 |
| Cow position: | chr29:17718827-17718973 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 115 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 69, 101 |
| Conread position: | 76-305 |
| Cow position: | chr29:1011388-1011637 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 177 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 46, 88 |
| Conread position: | 76-351 |
| Cow position: | chr29:32963728-32963447 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 213 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 66, 208 |
| Conread position: | 77-251 |
| Cow position: | chr29:16561570-16561755 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 138 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 44, 126 |
| Conread position: | 77-272 |
| Cow position: | chr29:9622504-9622701 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 145 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 45, 81 |
| Conread position: | 77-273 |
| Cow position: | chr29:396606-396388 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 164 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 81-247 |
| Cow position: | chr29:5520284-5520467 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 143 |
| Alignm E-value: | 9e-28 |
| Alignm gaps (pig, cow): | 41, 179 |
| Conread position: | 81-248 |
| Cow position: | chr29:8163627-8163812 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 139 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 41, 182 |
| Conread position: | 81-248 |
| Cow position: | chr29:29308382-29308556 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 132 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 35, 0 |
| Conread position: | 81-248 |
| Cow position: | chr29:40117765-40117587 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 133 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 41, 135 |
| Conread position: | 81-250 |
| Cow position: | chr29:31221944-31221762 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 134 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 9, 0 |
| Conread position: | 81-355 |
| Cow position: | chr29:28775276-28775570 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 214 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 31, 61 |
| Conread position: | 82-209 |
| Cow position: | chr29:8841250-8841390 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 112 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 40, 0 |
| Conread position: | 82-230 |
| Cow position: | chr29:7414693-7414535 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 119 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 82-231 |
| Cow position: | chr29:41112691-41112848 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 123 |
| Alignm E-value: | 9e-28 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 82-240 |
| Cow position: | chr29:15947368-15947191 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 137 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 40, 0 |
| Conread position: | 82-253 |
| Cow position: | chr29:22162065-22162237 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 123 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 36, 162 |
| Conread position: | 82-355 |
| Cow position: | chr29:706776-707060 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 221 |
| Alignm E-value: | 3.99931e-42 |
| Alignm gaps (pig, cow): | 63, 33 |
| Conread position: | 82-355 |
| Cow position: | chr29:23698169-23697866 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 225 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 29, 90 |
| Conread position: | 83-220 |
| Cow position: | chr29:15954906-15954774 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 108 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 10, 33 |
| Conread position: | 83-228 |
| Cow position: | chr29:415199-415052 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 117 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 39, 13 |
| Conread position: | 83-232 |
| Cow position: | chr29:26208157-26208007 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 108 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 61, 0 |
| Conread position: | 83-235 |
| Cow position: | chr29:36781112-36781275 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 121 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 37, 0 |
| Conread position: | 83-240 |
| Cow position: | chr29:16290921-16290750 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 133 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 39, 54 |
| Conread position: | 83-240 |
| Cow position: | chr29:34297373-34297544 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 127 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 40, 0 |
| Conread position: | 83-248 |
| Cow position: | chr29:14577055-14576876 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 136 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 42, 174 |
| Conread position: | 83-248 |
| Cow position: | chr29:19420422-19420596 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 131 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 35, 169 |
| Conread position: | 83-253 |
| Cow position: | chr29:31982019-31981843 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 136 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 39, 9 |
| Conread position: | 83-330 |
| Cow position: | chr29:13487120-13486861 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 188 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 40, 129 |
| Conread position: | 83-348 |
| Cow position: | chr29:3685323-3685618 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 221 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 39, 140 |
| Conread position: | 83-352 |
| Cow position: | chr29:2056258-2055948 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 227 |
| Alignm E-value: | 6e-35 |
| Alignm gaps (pig, cow): | 31, 0 |
| Conread position: | 83-353 |
| Cow position: | chr29:7310861-7310577 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 203 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 39, 136 |
| Conread position: | 83-353 |
| Cow position: | chr29:8862301-8862590 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 217 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 39, 70 |
| Conread position: | 83-353 |
| Cow position: | chr29:12025281-12025581 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 226 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 35, 128 |
| Conread position: | 83-353 |
| Cow position: | chr29:35292284-35291979 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 238 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 281 |
| Conread position: | 83-354 |
| Cow position: | chr29:41531049-41530735 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 237 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 39, 107 |
| Conread position: | 83-355 |
| Cow position: | chr29:6337848-6337548 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 220 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 39, 9 |
| Conread position: | 83-355 |
| Cow position: | chr29:10818261-10818548 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 190 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 12, 162 |
| Conread position: | 83-355 |
| Cow position: | chr29:28195335-28195626 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 224 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 0 |
| Conread position: | 83-355 |
| Cow position: | chr29:29769156-29769464 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 223 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 48, 0 |
| Conread position: | 83-355 |
| Cow position: | chr29:31926123-31926402 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 206 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 6, 42 |
| Conread position: | 83-355 |
| Cow position: | chr29:40891509-40891809 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 225 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 31, 132 |
| Conread position: | 84-355 |
| Cow position: | chr29:6636275-6635984 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 208 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 34, 98 |
| Conread position: | 84-355 |
| Cow position: | chr29:37599045-37599320 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 210 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 154, 31 |
| Conread position: | 85-231 |
| Cow position: | chr29:23678897-23678742 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 122 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 37, 0 |
| Conread position: | 86-248 |
| Cow position: | chr29:3293138-3292965 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 137 |
| Alignm E-value: | 9e-28 |
| Alignm gaps (pig, cow): | 36, 93 |
| Conread position: | 86-328 |
| Cow position: | chr29:32894452-32894182 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 198 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 40, 0 |
| Conread position: | 87-246 |
| Cow position: | chr29:37293221-37293054 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 127 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 35, 153 |
| Conread position: | 87-252 |
| Cow position: | chr29:13064044-13063869 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 129 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 30, 0 |
| Conread position: | 87-351 |
| Cow position: | chr29:4085490-4085212 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 215 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 35, 68 |
| Conread position: | 87-353 |
| Cow position: | chr29:10653516-10653234 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 207 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 28, 242 |
| Conread position: | 89-232 |
| Cow position: | chr29:10191853-10192008 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 122 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 33, 0 |
| Conread position: | 92-248 |
| Cow position: | chr29:23825851-23825689 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 121 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 30, 151 |
| Conread position: | 93-248 |
| Cow position: | chr29:4423262-4423422 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 129 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 29, 155 |
| Conread position: | 94-253 |
| Cow position: | chr29:39111137-39111299 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 126 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 28, 86 |
| Conread position: | 95-355 |
| Cow position: | chr29:34359640-34359915 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 204 |
| Alignm E-value: | 6e-34 |
| Alignm gaps (pig, cow): | 27, 210 |
| Conread position: | 130-353 |
| Cow position: | chr29:11705247-11705012 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 178 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 30, 182 |
| Conread position: | 137-231 |
| Cow position: | chr29:31934506-31934412 (view UCSC Genome Browser custom track) |
| Alignm length: | 95 |
| Alignm identity: | 79 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 137-245 |
| Cow position: | chr29:27042399-27042292 (view UCSC Genome Browser custom track) |
| Alignm length: | 109 |
| Alignm identity: | 88 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 100, 0 |
| Conread position: | 137-248 |
| Cow position: | chr29:23142207-23142318 (view UCSC Genome Browser custom track) |
| Alignm length: | 112 |
| Alignm identity: | 89 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 137-254 |
| Cow position: | chr29:16365758-16365877 (view UCSC Genome Browser custom track) |
| Alignm length: | 120 |
| Alignm identity: | 96 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 108, 0 |
| Conread position: | 137-355 |
| Cow position: | chr29:40097089-40096851 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 190 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 88, 215 |
| Conread position: | 141-248 |
| Cow position: | chr29:21509975-21509867 (view UCSC Genome Browser custom track) |
| Alignm length: | 109 |
| Alignm identity: | 87 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 10, 0 |
| Conread position: | 141-353 |
| Cow position: | chr29:19821407-19821176 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 166 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 33, 0 |
| Conread position: | 143-352 |
| Cow position: | chr29:39567803-39567577 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 167 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 9, 31 |
| Conread position: | 144-240 |
| Cow position: | chr29:27911710-27911615 (view UCSC Genome Browser custom track) |
| Alignm length: | 97 |
| Alignm identity: | 82 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 63, 0 |
| Conread position: | 144-240 |
| Cow position: | chr29:27926893-27926798 (view UCSC Genome Browser custom track) |
| Alignm length: | 97 |
| Alignm identity: | 82 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 63, 0 |
| Conread position: | 144-248 |
| Cow position: | chr29:18878361-18878466 (view UCSC Genome Browser custom track) |
| Alignm length: | 106 |
| Alignm identity: | 89 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 100, 0 |
| Conread position: | 144-248 |
| Cow position: | chr29:24051262-24051364 (view UCSC Genome Browser custom track) |
| Alignm length: | 105 |
| Alignm identity: | 88 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 63, 0 |
| Conread position: | 144-250 |
| Cow position: | chr29:7103678-7103573 (view UCSC Genome Browser custom track) |
| Alignm length: | 107 |
| Alignm identity: | 87 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 98, 0 |
| Conread position: | 144-325 |
| Cow position: | chr29:7040752-7040927 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 134 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 129, 85 |
| Conread position: | 144-351 |
| Cow position: | chr29:847522-847750 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 169 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 72, 176 |
| Conread position: | 144-351 |
| Cow position: | chr29:29551965-29551743 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 158 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 29, 21 |
| Conread position: | 144-352 |
| Cow position: | chr29:38582088-38581866 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 167 |
| Alignm E-value: | 6e-34 |
| Alignm gaps (pig, cow): | 85, 0 |
| Conread position: | 144-353 |
| Cow position: | chr29:29057296-29057072 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 176 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 15, 198 |
| Conread position: | 144-354 |
| Cow position: | chr29:42771755-42771539 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 169 |
| Alignm E-value: | 6e-34 |
| Alignm gaps (pig, cow): | 89, 43 |
| Conread position: | 144-355 |
| Cow position: | chr29:3100148-3100370 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 165 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 90, 14 |
| Conread position: | 144-355 |
| Cow position: | chr29:6286041-6286271 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 170 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 93, 0 |
| Conread position: | 144-355 |
| Cow position: | chr29:7425749-7425525 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 157 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 88, 64 |
| Conread position: | 144-355 |
| Cow position: | chr29:8669473-8669254 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 178 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 86, 9 |
| Conread position: | 144-355 |
| Cow position: | chr29:12783843-12784069 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 171 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 18, 65 |
| Conread position: | 144-355 |
| Cow position: | chr29:26653923-26654149 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 169 |
| Alignm E-value: | 9e-28 |
| Alignm gaps (pig, cow): | 14, 184 |
| Conread position: | 144-355 |
| Cow position: | chr29:30227162-30227386 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 169 |
| Alignm E-value: | 6e-35 |
| Alignm gaps (pig, cow): | 85, 53 |
| Conread position: | 144-355 |
| Cow position: | chr29:39329483-39329707 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 157 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 100, 0 |
| Conread position: | 145-355 |
| Cow position: | chr29:962022-961812 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 142 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 102, 187 |
| Conread position: | 147-231 |
| Cow position: | chr29:36220651-36220567 (view UCSC Genome Browser custom track) |
| Alignm length: | 85 |
| Alignm identity: | 75 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 148-231 |
| Cow position: | chr29:22818890-22818807 (view UCSC Genome Browser custom track) |
| Alignm length: | 84 |
| Alignm identity: | 74 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 148-321 |
| Cow position: | chr29:13867094-13867291 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 150 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 84, 0 |
| Conread position: | 148-353 |
| Cow position: | chr29:27858903-27858683 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 169 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 82, 178 |
| Conread position: | 149-248 |
| Cow position: | chr29:25333346-25333442 (view UCSC Genome Browser custom track) |
| Alignm length: | 100 |
| Alignm identity: | 87 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 77, 0 |
| Conread position: | 149-267 |
| Cow position: | chr29:34517376-34517502 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 104 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 82, 0 |
| Conread position: | 149-320 |
| Cow position: | chr29:21645424-21645246 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 137 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 82, 51 |
| Conread position: | 149-353 |
| Cow position: | chr29:22936386-22936159 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 174 |
| Alignm E-value: | 6e-34 |
| Alignm gaps (pig, cow): | 43, 0 |
| Conread position: | 149-353 |
| Cow position: | chr29:40298905-40299120 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 165 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 84, 176 |
| Conread position: | 149-354 |
| Cow position: | chr29:19125437-19125231 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 140 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 88, 113 |
| Conread position: | 149-355 |
| Cow position: | chr29:44378304-44378528 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 167 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 70, 0 |
| Conread position: | 150-330 |
| Cow position: | chr29:31814053-31813860 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 147 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 150-355 |
| Cow position: | chr29:4334832-4334615 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 163 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 76, 175 |
| Conread position: | 150-355 |
| Cow position: | chr29:32799598-32799821 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 174 |
| Alignm E-value: | 8e-38 |
| Alignm gaps (pig, cow): | 81, 0 |
| Conread position: | 152-322 |
| Cow position: | chr29:8004815-8005003 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 138 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 81, 0 |
| Conread position: | 153-355 |
| Cow position: | chr29:6293369-6293587 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 166 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 76, 20 |
| Conread position: | 153-355 |
| Cow position: | chr29:40583896-40583680 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 164 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 80, 20 |
| Conread position: | 155-355 |
| Cow position: | chr29:94465-94666 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 156 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 78, 14 |
| Conread position: | 159-250 |
| Cow position: | chr29:31211722-31211632 (view UCSC Genome Browser custom track) |
| Alignm length: | 92 |
| Alignm identity: | 79 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 83, 0 |
| Conread position: | 159-355 |
| Cow position: | chr29:4520439-4520222 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 165 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 81, 9 |
| Conread position: | 173-355 |
| Cow position: | chr29:30188261-30188452 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 156 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 80, 0 |
| Conread position: | 174-355 |
| Cow position: | chr29:41365199-41364999 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 157 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 60, 44 |
| Conread position: | 195-355 |
| Cow position: | chr29:6217495-6217661 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 121 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 197-355 |
| Cow position: | chr29:16757102-16756946 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 124 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 82, 33 |
| Conread position: | 201-349 |
| Cow position: | chr29:32767482-32767630 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 122 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 33, 79 |
| Conread position: | 225-353 |
| Cow position: | chr29:36183305-36183170 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 104 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 232-354 |
| Cow position: | chr29:12004745-12004869 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 104 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 22, 110 |
| Conread position: | 232-355 |
| Cow position: | chr29:1583109-1582984 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 98 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 233-355 |
| Cow position: | chr29:26206880-26206755 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 100 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 21, 0 |
| Conread position: | 233-355 |
| Cow position: | chr29:39643192-39643064 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 105 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 21, 86 |
Show alignments to all cow chromosomes.