Non-Coding RNA Search

Cow genome map


           Conread name:
           rcki29_p3.y1
        

               Conread position:
               71-227
               

               Cow position:
               chr4:30250079-30250239 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               123
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               12, 65
               

               Conread position:
               71-231
               

               Cow position:
               chr4:67393299-67393119 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               140
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               16, 0
               

               Conread position:
               71-247
               

               Cow position:
               chr4:56805369-56805189 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               143
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               17, 47
               

               Conread position:
               71-355
               

               Cow position:
               chr4:53209405-53209120 (view UCSC Genome Browser custom track)
               

               Alignm length:
               297
               

               Alignm identity:
               203
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               44, 87
               

               Conread position:
               73-228
               

               Cow position:
               chr4:66168137-66168301 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               129
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               49, 0
               

               Conread position:
               73-231
               

               Cow position:
               chr4:34510030-34509868 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               120
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               45, 0
               

               Conread position:
               73-248
               

               Cow position:
               chr4:20124767-20124956 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               150
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               49, 186
               

               Conread position:
               73-355
               

               Cow position:
               chr4:25356129-25356426 (view UCSC Genome Browser custom track)
               

               Alignm length:
               300
               

               Alignm identity:
               206
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               52, 145
               

               Conread position:
               74-235
               

               Cow position:
               chr4:22331320-22331148 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               126
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               66, 0
               

               Conread position:
               74-248
               

               Cow position:
               chr4:21520767-21520590 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               132
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               43, 172
               

               Conread position:
               74-355
               

               Cow position:
               chr4:8801688-8801382 (view UCSC Genome Browser custom track)
               

               Alignm length:
               311
               

               Alignm identity:
               217
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               48, 14
               

               Conread position:
               75-221
               

               Cow position:
               chr4:12748221-12748375 (view UCSC Genome Browser custom track)
               

               Alignm length:
               155
               

               Alignm identity:
               115
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               75-354
               

               Cow position:
               chr4:25227132-25226832 (view UCSC Genome Browser custom track)
               

               Alignm length:
               305
               

               Alignm identity:
               213
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               47, 12
               

               Conread position:
               75-355
               

               Cow position:
               chr4:34310266-34310569 (view UCSC Genome Browser custom track)
               

               Alignm length:
               307
               

               Alignm identity:
               223
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               43, 61
               

               Conread position:
               75-355
               

               Cow position:
               chr4:68076339-68076648 (view UCSC Genome Browser custom track)
               

               Alignm length:
               312
               

               Alignm identity:
               226
               

               Alignm E-value:
               8e-34
               

               Alignm gaps (pig, cow):
               13, 114
               

               Conread position:
               76-245
               

               Cow position:
               chr4:21112374-21112559 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               141
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               11, 147
               

               Conread position:
               76-355
               

               Cow position:
               chr4:27530311-27529998 (view UCSC Genome Browser custom track)
               

               Alignm length:
               314
               

               Alignm identity:
               221
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               7, 0
               

               Conread position:
               76-355
               

               Cow position:
               chr4:52780043-52779733 (view UCSC Genome Browser custom track)
               

               Alignm length:
               313
               

               Alignm identity:
               234
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               46, 32
               

               Conread position:
               77-235
               

               Cow position:
               chr4:21506767-21506932 (view UCSC Genome Browser custom track)
               

               Alignm length:
               167
               

               Alignm identity:
               127
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               23, 93
               

               Conread position:
               77-235
               

               Cow position:
               chr4:36517302-36517459 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               121
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               39, 79
               

               Conread position:
               77-248
               

               Cow position:
               chr4:54938077-54937907 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               136
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               37, 74
               

               Conread position:
               77-273
               

               Cow position:
               chr4:5790844-5790622 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               166
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               11, 0
               

               Conread position:
               77-273
               

               Cow position:
               chr4:14131621-14131407 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               163
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               45, 17
               

               Conread position:
               77-352
               

               Cow position:
               chr4:16513331-16513636 (view UCSC Genome Browser custom track)
               

               Alignm length:
               307
               

               Alignm identity:
               223
               

               Alignm E-value:
               8e-34
               

               Alignm gaps (pig, cow):
               43, 16
               

               Conread position:
               77-355
               

               Cow position:
               chr4:19238416-19238120 (view UCSC Genome Browser custom track)
               

               Alignm length:
               302
               

               Alignm identity:
               216
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               7, 180
               

               Conread position:
               77-355
               

               Cow position:
               chr4:65463316-65463604 (view UCSC Genome Browser custom track)
               

               Alignm length:
               293
               

               Alignm identity:
               194
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               38, 166
               

               Conread position:
               78-240
               

               Cow position:
               chr4:48409089-48409250 (view UCSC Genome Browser custom track)
               

               Alignm length:
               168
               

               Alignm identity:
               124
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               39, 78
               

               Conread position:
               78-266
               

               Cow position:
               chr4:57566498-57566704 (view UCSC Genome Browser custom track)
               

               Alignm length:
               207
               

               Alignm identity:
               153
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               40, 0
               

               Conread position:
               78-351
               

               Cow position:
               chr4:22073121-22073430 (view UCSC Genome Browser custom track)
               

               Alignm length:
               310
               

               Alignm identity:
               221
               

               Alignm E-value:
               7e-32
               

               Alignm gaps (pig, cow):
               45, 0
               

               Conread position:
               78-355
               

               Cow position:
               chr4:10968201-10968504 (view UCSC Genome Browser custom track)
               

               Alignm length:
               310
               

               Alignm identity:
               230
               

               Alignm E-value:
               5e-39
               

               Alignm gaps (pig, cow):
               46, 249
               

               Conread position:
               80-355
               

               Cow position:
               chr4:10732416-10732104 (view UCSC Genome Browser custom track)
               

               Alignm length:
               313
               

               Alignm identity:
               226
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               16, 0
               

               Conread position:
               81-232
               

               Cow position:
               chr4:27657165-27657003 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               120
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               48, 0
               

               Conread position:
               81-235
               

               Cow position:
               chr4:21275420-21275577 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               117
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               37, 0
               

               Conread position:
               81-235
               

               Cow position:
               chr4:33360286-33360128 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               119
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               39, 78
               

               Conread position:
               81-248
               

               Cow position:
               chr4:28701538-28701369 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               123
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               37, 150
               

               Conread position:
               81-252
               

               Cow position:
               chr4:47230803-47230992 (view UCSC Genome Browser custom track)
               

               Alignm length:
               190
               

               Alignm identity:
               144
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               38, 0
               

               Conread position:
               81-252
               

               Cow position:
               chr4:47283818-47284007 (view UCSC Genome Browser custom track)
               

               Alignm length:
               190
               

               Alignm identity:
               144
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               38, 0
               

               Conread position:
               81-273
               

               Cow position:
               chr4:23271477-23271275 (view UCSC Genome Browser custom track)
               

               Alignm length:
               210
               

               Alignm identity:
               167
               

               Alignm E-value:
               8e-34
               

               Alignm gaps (pig, cow):
               44, 169
               

               Conread position:
               81-352
               

               Cow position:
               chr4:33091544-33091264 (view UCSC Genome Browser custom track)
               

               Alignm length:
               289
               

               Alignm identity:
               204
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               151, 49
               

               Conread position:
               81-355
               

               Cow position:
               chr4:22907692-22907401 (view UCSC Genome Browser custom track)
               

               Alignm length:
               294
               

               Alignm identity:
               205
               

               Alignm E-value:
               6e-31
               

               Alignm gaps (pig, cow):
               46, 258
               

               Conread position:
               82-235
               

               Cow position:
               chr4:40393003-40392839 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               127
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               40, 0
               

               Conread position:
               82-248
               

               Cow position:
               chr4:17774173-17774340 (view UCSC Genome Browser custom track)
               

               Alignm length:
               168
               

               Alignm identity:
               126
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               159, 0
               

               Conread position:
               82-253
               

               Cow position:
               chr4:51728266-51728084 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               132
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               41, 0
               

               Conread position:
               82-278
               

               Cow position:
               chr4:52823210-52823420 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               151
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               40, 175
               

               Conread position:
               82-349
               

               Cow position:
               chr4:23600346-23600066 (view UCSC Genome Browser custom track)
               

               Alignm length:
               284
               

               Alignm identity:
               203
               

               Alignm E-value:
               9e-35
               

               Alignm gaps (pig, cow):
               38, 58
               

               Conread position:
               82-355
               

               Cow position:
               chr4:19745062-19744766 (view UCSC Genome Browser custom track)
               

               Alignm length:
               297
               

               Alignm identity:
               203
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               33, 0
               

               Conread position:
               83-222
               

               Cow position:
               chr4:66509817-66509674 (view UCSC Genome Browser custom track)
               

               Alignm length:
               145
               

               Alignm identity:
               112
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               39, 73
               

               Conread position:
               83-227
               

               Cow position:
               chr4:19200297-19200144 (view UCSC Genome Browser custom track)
               

               Alignm length:
               154
               

               Alignm identity:
               125
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               41, 0
               

               Conread position:
               83-230
               

               Cow position:
               chr4:34234654-34234500 (view UCSC Genome Browser custom track)
               

               Alignm length:
               156
               

               Alignm identity:
               120
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               55, 39
               

               Conread position:
               83-231
               

               Cow position:
               chr4:23943452-23943617 (view UCSC Genome Browser custom track)
               

               Alignm length:
               166
               

               Alignm identity:
               128
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               39, 0
               

               Conread position:
               83-231
               

               Cow position:
               chr4:30769223-30769063 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               133
               

               Alignm E-value:
               6e-31
               

               Alignm gaps (pig, cow):
               39, 137
               

               Conread position:
               83-231
               

               Cow position:
               chr4:45840583-45840426 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               121
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               40, 0
               

               Conread position:
               83-231
               

               Cow position:
               chr4:59055680-59055833 (view UCSC Genome Browser custom track)
               

               Alignm length:
               154
               

               Alignm identity:
               120
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               34, 0
               

               Conread position:
               83-235
               

               Cow position:
               chr4:44681069-44681228 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               125
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               39, 54
               

               Conread position:
               83-238
               

               Cow position:
               chr4:12052146-12052308 (view UCSC Genome Browser custom track)
               

               Alignm length:
               167
               

               Alignm identity:
               125
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               39, 101
               

               Conread position:
               83-240
               

               Cow position:
               chr4:3299607-3299774 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               132
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               39, 128
               

               Conread position:
               83-240
               

               Cow position:
               chr4:14063105-14063265 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               121
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               40, 102
               

               Conread position:
               83-240
               

               Cow position:
               chr4:17790105-17790273 (view UCSC Genome Browser custom track)
               

               Alignm length:
               169
               

               Alignm identity:
               138
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               39, 0
               

               Conread position:
               83-242
               

               Cow position:
               chr4:8675558-8675385 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               133
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               34, 148
               

               Conread position:
               83-245
               

               Cow position:
               chr4:16070494-16070663 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               130
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               32, 55
               

               Conread position:
               83-247
               

               Cow position:
               chr4:348241-348412 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               135
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               65, 167
               

               Conread position:
               83-247
               

               Cow position:
               chr4:13140920-13141085 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               132
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               56, 35
               

               Conread position:
               83-247
               

               Cow position:
               chr4:15236814-15236645 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               132
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               39, 11
               

               Conread position:
               83-247
               

               Cow position:
               chr4:30691193-30691013 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               137
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               39, 0
               

               Conread position:
               83-248
               

               Cow position:
               chr4:479611-479780 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               132
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               65, 32
               

               Conread position:
               83-248
               

               Cow position:
               chr4:8083617-8083786 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               139
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               39, 164
               

               Conread position:
               83-248
               

               Cow position:
               chr4:31178013-31177836 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               136
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               39, 172
               

               Conread position:
               83-248
               

               Cow position:
               chr4:61608777-61608953 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               141
               

               Alignm E-value:
               7e-32
               

               Alignm gaps (pig, cow):
               31, 171
               

               Conread position:
               83-252
               

               Cow position:
               chr4:61999007-61999196 (view UCSC Genome Browser custom track)
               

               Alignm length:
               190
               

               Alignm identity:
               142
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               39, 0
               

               Conread position:
               83-253
               

               Cow position:
               chr4:46446996-46447175 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               137
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               57, 39
               

               Conread position:
               83-262
               

               Cow position:
               chr4:2537460-2537273 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               137
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               39, 0
               

               Conread position:
               83-328
               

               Cow position:
               chr4:45626450-45626714 (view UCSC Genome Browser custom track)
               

               Alignm length:
               271
               

               Alignm identity:
               197
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               69, 32
               

               Conread position:
               83-344
               

               Cow position:
               chr4:11611055-11610768 (view UCSC Genome Browser custom track)
               

               Alignm length:
               288
               

               Alignm identity:
               211
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               53, 0
               

               Conread position:
               83-350
               

               Cow position:
               chr4:29291697-29291405 (view UCSC Genome Browser custom track)
               

               Alignm length:
               293
               

               Alignm identity:
               218
               

               Alignm E-value:
               6.00036e-42
               

               Alignm gaps (pig, cow):
               39, 0
               

               Conread position:
               83-351
               

               Cow position:
               chr4:20147376-20147070 (view UCSC Genome Browser custom track)
               

               Alignm length:
               307
               

               Alignm identity:
               232
               

               Alignm E-value:
               6.00036e-42
               

               Alignm gaps (pig, cow):
               39, 0
               

               Conread position:
               83-351
               

               Cow position:
               chr4:37935111-37935399 (view UCSC Genome Browser custom track)
               

               Alignm length:
               292
               

               Alignm identity:
               217
               

               Alignm E-value:
               5.99994e-41
               

               Alignm gaps (pig, cow):
               35, 68
               

               Conread position:
               83-352
               

               Cow position:
               chr4:51769296-51768997 (view UCSC Genome Browser custom track)
               

               Alignm length:
               305
               

               Alignm identity:
               224
               

               Alignm E-value:
               9e-35
               

               Alignm gaps (pig, cow):
               31, 42
               

               Conread position:
               83-352
               

               Cow position:
               chr4:59873617-59873315 (view UCSC Genome Browser custom track)
               

               Alignm length:
               304
               

               Alignm identity:
               221
               

               Alignm E-value:
               8e-34
               

               Alignm gaps (pig, cow):
               39, 102
               

               Conread position:
               83-353
               

               Cow position:
               chr4:27632632-27632333 (view UCSC Genome Browser custom track)
               

               Alignm length:
               300
               

               Alignm identity:
               232
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               34, 0
               

               Conread position:
               83-353
               

               Cow position:
               chr4:36929483-36929200 (view UCSC Genome Browser custom track)
               

               Alignm length:
               288
               

               Alignm identity:
               208
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               23, 41
               

               Conread position:
               83-353
               

               Cow position:
               chr4:45662325-45662626 (view UCSC Genome Browser custom track)
               

               Alignm length:
               302
               

               Alignm identity:
               211
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               30, 0
               

               Conread position:
               83-354
               

               Cow position:
               chr4:10016444-10016713 (view UCSC Genome Browser custom track)
               

               Alignm length:
               285
               

               Alignm identity:
               203
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               40, 159
               

               Conread position:
               83-355
               

               Cow position:
               chr4:12591029-12591330 (view UCSC Genome Browser custom track)
               

               Alignm length:
               306
               

               Alignm identity:
               231
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               65, 9
               

               Conread position:
               83-355
               

               Cow position:
               chr4:12676986-12676686 (view UCSC Genome Browser custom track)
               

               Alignm length:
               303
               

               Alignm identity:
               218
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               39, 95
               

               Conread position:
               83-355
               

               Cow position:
               chr4:15439777-15439460 (view UCSC Genome Browser custom track)
               

               Alignm length:
               318
               

               Alignm identity:
               222
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               34, 0
               

               Conread position:
               83-355
               

               Cow position:
               chr4:19314178-19313892 (view UCSC Genome Browser custom track)
               

               Alignm length:
               288
               

               Alignm identity:
               196
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               110, 103
               

               Conread position:
               83-355
               

               Cow position:
               chr4:19558858-19558600 (view UCSC Genome Browser custom track)
               

               Alignm length:
               273
               

               Alignm identity:
               196
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               56, 0
               

               Conread position:
               83-355
               

               Cow position:
               chr4:20327532-20327829 (view UCSC Genome Browser custom track)
               

               Alignm length:
               303
               

               Alignm identity:
               212
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               40, 18
               

               Conread position:
               83-355
               

               Cow position:
               chr4:30003655-30003907 (view UCSC Genome Browser custom track)
               

               Alignm length:
               274
               

               Alignm identity:
               193
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               11, 55
               

               Conread position:
               83-355
               

               Cow position:
               chr4:45582931-45583238 (view UCSC Genome Browser custom track)
               

               Alignm length:
               308
               

               Alignm identity:
               221
               

               Alignm E-value:
               8e-33
               

               Alignm gaps (pig, cow):
               38, 0
               

               Conread position:
               83-355
               

               Cow position:
               chr4:45685644-45685352 (view UCSC Genome Browser custom track)
               

               Alignm length:
               300
               

               Alignm identity:
               224
               

               Alignm E-value:
               4e-37
               

               Alignm gaps (pig, cow):
               42, 217
               

               Conread position:
               83-355
               

               Cow position:
               chr4:46597545-46597259 (view UCSC Genome Browser custom track)
               

               Alignm length:
               288
               

               Alignm identity:
               223
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               21, 53
               

               Conread position:
               83-355
               

               Cow position:
               chr4:49794841-49794553 (view UCSC Genome Browser custom track)
               

               Alignm length:
               294
               

               Alignm identity:
               231
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               39, 245
               

               Conread position:
               83-355
               

               Cow position:
               chr4:61391044-61391323 (view UCSC Genome Browser custom track)
               

               Alignm length:
               284
               

               Alignm identity:
               202
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               32, 11
               

               Conread position:
               84-248
               

               Cow position:
               chr4:54500854-54501011 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               124
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               55, 0
               

               Conread position:
               84-344
               

               Cow position:
               chr4:45725054-45724767 (view UCSC Genome Browser custom track)
               

               Alignm length:
               291
               

               Alignm identity:
               208
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               38, 136
               

               Conread position:
               85-248
               

               Cow position:
               chr4:21479061-21479219 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               119
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               81, 0
               

               Conread position:
               85-253
               

               Cow position:
               chr4:55694359-55694180 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               134
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               37, 163
               

               Conread position:
               85-355
               

               Cow position:
               chr4:16881184-16881482 (view UCSC Genome Browser custom track)
               

               Alignm length:
               299
               

               Alignm identity:
               214
               

               Alignm E-value:
               8e-33
               

               Alignm gaps (pig, cow):
               33, 0
               

               Conread position:
               86-230
               

               Cow position:
               chr4:39569385-39569232 (view UCSC Genome Browser custom track)
               

               Alignm length:
               154
               

               Alignm identity:
               115
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               29, 0
               

               Conread position:
               86-244
               

               Cow position:
               chr4:22482508-22482341 (view UCSC Genome Browser custom track)
               

               Alignm length:
               169
               

               Alignm identity:
               139
               

               Alignm E-value:
               9e-35
               

               Alignm gaps (pig, cow):
               29, 157
               

               Conread position:
               86-344
               

               Cow position:
               chr4:22101073-22101368 (view UCSC Genome Browser custom track)
               

               Alignm length:
               296
               

               Alignm identity:
               214
               

               Alignm E-value:
               6e-31
               

               Alignm gaps (pig, cow):
               36, 0
               

               Conread position:
               87-240
               

               Cow position:
               chr4:42231846-42232004 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               122
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               35, 153
               

               Conread position:
               87-247
               

               Cow position:
               chr4:32602013-32601846 (view UCSC Genome Browser custom track)
               

               Alignm length:
               169
               

               Alignm identity:
               125
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               36, 152
               

               Conread position:
               87-247
               

               Cow position:
               chr4:34699857-34700021 (view UCSC Genome Browser custom track)
               

               Alignm length:
               167
               

               Alignm identity:
               124
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               30, 146
               

               Conread position:
               87-248
               

               Cow position:
               chr4:25802881-25802702 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               140
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               35, 174
               

               Conread position:
               87-250
               

               Cow position:
               chr4:22849315-22849482 (view UCSC Genome Browser custom track)
               

               Alignm length:
               169
               

               Alignm identity:
               128
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               35, 139
               

               Conread position:
               87-352
               

               Cow position:
               chr4:16238982-16239266 (view UCSC Genome Browser custom track)
               

               Alignm length:
               286
               

               Alignm identity:
               205
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               35, 176
               

               Conread position:
               87-353
               

               Cow position:
               chr4:25370281-25370003 (view UCSC Genome Browser custom track)
               

               Alignm length:
               284
               

               Alignm identity:
               198
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               35, 228
               

               Conread position:
               87-353
               

               Cow position:
               chr4:29384054-29384339 (view UCSC Genome Browser custom track)
               

               Alignm length:
               289
               

               Alignm identity:
               212
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               39, 210
               

               Conread position:
               87-353
               

               Cow position:
               chr4:53126284-53126001 (view UCSC Genome Browser custom track)
               

               Alignm length:
               290
               

               Alignm identity:
               213
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               67, 28
               

               Conread position:
               87-355
               

               Cow position:
               chr4:19315820-19316121 (view UCSC Genome Browser custom track)
               

               Alignm length:
               302
               

               Alignm identity:
               219
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               35, 0
               

               Conread position:
               87-355
               

               Cow position:
               chr4:19597145-19597435 (view UCSC Genome Browser custom track)
               

               Alignm length:
               292
               

               Alignm identity:
               198
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               36, 227
               

               Conread position:
               88-335
               

               Cow position:
               chr4:44183934-44184210 (view UCSC Genome Browser custom track)
               

               Alignm length:
               277
               

               Alignm identity:
               197
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               34, 0
               

               Conread position:
               89-248
               

               Cow position:
               chr4:25929394-25929227 (view UCSC Genome Browser custom track)
               

               Alignm length:
               168
               

               Alignm identity:
               122
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               32, 0
               

               Conread position:
               89-352
               

               Cow position:
               chr4:53208468-53208178 (view UCSC Genome Browser custom track)
               

               Alignm length:
               291
               

               Alignm identity:
               198
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               26, 0
               

               Conread position:
               94-355
               

               Cow position:
               chr4:8770274-8769991 (view UCSC Genome Browser custom track)
               

               Alignm length:
               290
               

               Alignm identity:
               208
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               28, 83
               

               Conread position:
               94-355
               

               Cow position:
               chr4:23646690-23646961 (view UCSC Genome Browser custom track)
               

               Alignm length:
               280
               

               Alignm identity:
               208
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               29, 108
               

               Conread position:
               94-355
               

               Cow position:
               chr4:31004232-31004526 (view UCSC Genome Browser custom track)
               

               Alignm length:
               296
               

               Alignm identity:
               207
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               28, 51
               

               Conread position:
               95-355
               

               Cow position:
               chr4:45074229-45073945 (view UCSC Genome Browser custom track)
               

               Alignm length:
               290
               

               Alignm identity:
               208
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               63, 20
               

               Conread position:
               96-345
               

               Cow position:
               chr4:61066931-61066665 (view UCSC Genome Browser custom track)
               

               Alignm length:
               269
               

               Alignm identity:
               199
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               27, 57
               

               Conread position:
               97-212
               

               Cow position:
               chr4:60072575-60072698 (view UCSC Genome Browser custom track)
               

               Alignm length:
               125
               

               Alignm identity:
               103
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               17, 26
               

               Conread position:
               98-231
               

               Cow position:
               chr4:39092060-39091914 (view UCSC Genome Browser custom track)
               

               Alignm length:
               147
               

               Alignm identity:
               115
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               24, 0
               

               Conread position:
               98-354
               

               Cow position:
               chr4:37732321-37732601 (view UCSC Genome Browser custom track)
               

               Alignm length:
               282
               

               Alignm identity:
               206
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               28, 17
               

               Conread position:
               101-351
               

               Cow position:
               chr4:19584861-19584602 (view UCSC Genome Browser custom track)
               

               Alignm length:
               261
               

               Alignm identity:
               201
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               24, 37
               

               Conread position:
               102-352
               

               Cow position:
               chr4:13256243-13255972 (view UCSC Genome Browser custom track)
               

               Alignm length:
               273
               

               Alignm identity:
               188
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               22, 80
               

               Conread position:
               109-247
               

               Cow position:
               chr4:34983343-34983487 (view UCSC Genome Browser custom track)
               

               Alignm length:
               145
               

               Alignm identity:
               108
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               43, 0
               

               Conread position:
               110-348
               

               Cow position:
               chr4:1499039-1499294 (view UCSC Genome Browser custom track)
               

               Alignm length:
               258
               

               Alignm identity:
               182
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               5, 13
               

               Conread position:
               113-355
               

               Cow position:
               chr4:11496506-11496751 (view UCSC Genome Browser custom track)
               

               Alignm length:
               249
               

               Alignm identity:
               177
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               6, 18
               

               Conread position:
               116-355
               

               Cow position:
               chr4:45575109-45574887 (view UCSC Genome Browser custom track)
               

               Alignm length:
               240
               

               Alignm identity:
               174
               

               Alignm E-value:
               6e-31
               

               Alignm gaps (pig, cow):
               70, 0
               

               Conread position:
               119-354
               

               Cow position:
               chr4:38946355-38946090 (view UCSC Genome Browser custom track)
               

               Alignm length:
               267
               

               Alignm identity:
               200
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               15, 8
               

               Conread position:
               122-236
               

               Cow position:
               chr4:11366472-11366361 (view UCSC Genome Browser custom track)
               

               Alignm length:
               115
               

               Alignm identity:
               98
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               26, 0
               

               Conread position:
               122-353
               

               Cow position:
               chr4:25888696-25888946 (view UCSC Genome Browser custom track)
               

               Alignm length:
               255
               

               Alignm identity:
               188
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               30, 70
               

               Conread position:
               123-325
               

               Cow position:
               chr4:35834349-35834570 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               159
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               15, 0
               

               Conread position:
               124-352
               

               Cow position:
               chr4:65649998-65650239 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               179
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               28, 204
               

               Conread position:
               132-235
               

               Cow position:
               chr4:28781521-28781624 (view UCSC Genome Browser custom track)
               

               Alignm length:
               104
               

               Alignm identity:
               89
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               134-351
               

               Cow position:
               chr4:1495284-1495515 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               173
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               99, 73
               

               Conread position:
               137-227
               

               Cow position:
               chr4:30845493-30845403 (view UCSC Genome Browser custom track)
               

               Alignm length:
               91
               

               Alignm identity:
               82
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               137-248
               

               Cow position:
               chr4:27699153-27699043 (view UCSC Genome Browser custom track)
               

               Alignm length:
               112
               

               Alignm identity:
               93
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               105, 0
               

               Conread position:
               137-250
               

               Cow position:
               chr4:56852969-56852858 (view UCSC Genome Browser custom track)
               

               Alignm length:
               114
               

               Alignm identity:
               91
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               95, 0
               

               Conread position:
               137-338
               

               Cow position:
               chr4:47510506-47510288 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               160
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               79, 0
               

               Conread position:
               137-347
               

               Cow position:
               chr4:45013055-45013275 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               165
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               22, 36
               

               Conread position:
               137-348
               

               Cow position:
               chr4:19098594-19098357 (view UCSC Genome Browser custom track)
               

               Alignm length:
               242
               

               Alignm identity:
               174
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               96, 216
               

               Conread position:
               137-351
               

               Cow position:
               chr4:37675736-37675500 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               184
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               15, 0
               

               Conread position:
               137-353
               

               Cow position:
               chr4:46455947-46456177 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               183
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               96, 0
               

               Conread position:
               137-353
               

               Cow position:
               chr4:56591159-56590924 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               176
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               96, 89
               

               Conread position:
               137-354
               

               Cow position:
               chr4:68764637-68764403 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               175
               

               Alignm E-value:
               7e-32
               

               Alignm gaps (pig, cow):
               92, 65
               

               Conread position:
               137-355
               

               Cow position:
               chr4:8705117-8704867 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               182
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               11, 0
               

               Conread position:
               137-355
               

               Cow position:
               chr4:18095551-18095789 (view UCSC Genome Browser custom track)
               

               Alignm length:
               239
               

               Alignm identity:
               183
               

               Alignm E-value:
               4e-37
               

               Alignm gaps (pig, cow):
               23, 0
               

               Conread position:
               137-355
               

               Cow position:
               chr4:44782496-44782254 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               189
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               96, 0
               

               Conread position:
               137-355
               

               Cow position:
               chr4:45636288-45636045 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               180
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               100, 218
               

               Conread position:
               137-355
               

               Cow position:
               chr4:49089908-49089669 (view UCSC Genome Browser custom track)
               

               Alignm length:
               240
               

               Alignm identity:
               176
               

               Alignm E-value:
               7e-32
               

               Alignm gaps (pig, cow):
               59, 0
               

               Conread position:
               142-355
               

               Cow position:
               chr4:22196099-22196310 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               149
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               98, 32
               

               Conread position:
               143-238
               

               Cow position:
               chr4:57156785-57156880 (view UCSC Genome Browser custom track)
               

               Alignm length:
               96
               

               Alignm identity:
               80
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               143-250
               

               Cow position:
               chr4:6093952-6094056 (view UCSC Genome Browser custom track)
               

               Alignm length:
               108
               

               Alignm identity:
               89
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               58, 0
               

               Conread position:
               144-240
               

               Cow position:
               chr4:22051001-22051097 (view UCSC Genome Browser custom track)
               

               Alignm length:
               97
               

               Alignm identity:
               81
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               144-240
               

               Cow position:
               chr4:47038882-47038786 (view UCSC Genome Browser custom track)
               

               Alignm length:
               97
               

               Alignm identity:
               81
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               144-247
               

               Cow position:
               chr4:19709054-19708950 (view UCSC Genome Browser custom track)
               

               Alignm length:
               105
               

               Alignm identity:
               88
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               97, 0
               

               Conread position:
               144-247
               

               Cow position:
               chr4:38358710-38358812 (view UCSC Genome Browser custom track)
               

               Alignm length:
               104
               

               Alignm identity:
               87
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               93, 0
               

               Conread position:
               144-253
               

               Cow position:
               chr4:22138106-22138215 (view UCSC Genome Browser custom track)
               

               Alignm length:
               112
               

               Alignm identity:
               92
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               70, 93
               

               Conread position:
               144-267
               

               Cow position:
               chr4:13919092-13918957 (view UCSC Genome Browser custom track)
               

               Alignm length:
               136
               

               Alignm identity:
               111
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               89, 0
               

               Conread position:
               144-272
               

               Cow position:
               chr4:43763184-43763055 (view UCSC Genome Browser custom track)
               

               Alignm length:
               131
               

               Alignm identity:
               100
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               76, 65
               

               Conread position:
               144-326
               

               Cow position:
               chr4:61757776-61757590 (view UCSC Genome Browser custom track)
               

               Alignm length:
               195
               

               Alignm identity:
               142
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               87, 63
               

               Conread position:
               144-328
               

               Cow position:
               chr4:44772928-44773138 (view UCSC Genome Browser custom track)
               

               Alignm length:
               211
               

               Alignm identity:
               167
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               89, 0
               

               Conread position:
               144-337
               

               Cow position:
               chr4:63769948-63769746 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               151
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               110, 93
               

               Conread position:
               144-349
               

               Cow position:
               chr4:12004329-12004112 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               178
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               89, 0
               

               Conread position:
               144-351
               

               Cow position:
               chr4:5609980-5610186 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               155
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               62, 28
               

               Conread position:
               144-351
               

               Cow position:
               chr4:11897191-11897413 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               172
               

               Alignm E-value:
               5e-39
               

               Alignm gaps (pig, cow):
               70, 0
               

               Conread position:
               144-351
               

               Cow position:
               chr4:19700210-19699991 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               156
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               80, 146
               

               Conread position:
               144-352
               

               Cow position:
               chr4:43515831-43515610 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               167
               

               Alignm E-value:
               8e-34
               

               Alignm gaps (pig, cow):
               82, 0
               

               Conread position:
               144-353
               

               Cow position:
               chr4:41300883-41301107 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               172
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               86, 32
               

               Conread position:
               144-354
               

               Cow position:
               chr4:25879505-25879280 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               179
               

               Alignm E-value:
               7.00649e-43
               

               Alignm gaps (pig, cow):
               87, 0
               

               Conread position:
               144-355
               

               Cow position:
               chr4:26401069-26400843 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               172
               

               Alignm E-value:
               7e-32
               

               Alignm gaps (pig, cow):
               89, 9
               

               Conread position:
               144-355
               

               Cow position:
               chr4:37313280-37313051 (view UCSC Genome Browser custom track)
               

               Alignm length:
               232
               

               Alignm identity:
               171
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               90, 127
               

               Conread position:
               145-354
               

               Cow position:
               chr4:2681443-2681237 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               150
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               87, 131
               

               Conread position:
               146-247
               

               Cow position:
               chr4:5904599-5904499 (view UCSC Genome Browser custom track)
               

               Alignm length:
               102
               

               Alignm identity:
               84
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               90, 0
               

               Conread position:
               146-248
               

               Cow position:
               chr4:19561901-19561800 (view UCSC Genome Browser custom track)
               

               Alignm length:
               103
               

               Alignm identity:
               84
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               96, 0
               

               Conread position:
               146-355
               

               Cow position:
               chr4:10999603-10999822 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               179
               

               Alignm E-value:
               5e-40
               

               Alignm gaps (pig, cow):
               87, 12
               

               Conread position:
               149-240
               

               Cow position:
               chr4:53819576-53819667 (view UCSC Genome Browser custom track)
               

               Alignm length:
               92
               

               Alignm identity:
               81
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               149-240
               

               Cow position:
               chr4:54937191-54937100 (view UCSC Genome Browser custom track)
               

               Alignm length:
               92
               

               Alignm identity:
               83
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               149-252
               

               Cow position:
               chr4:57421160-57421055 (view UCSC Genome Browser custom track)
               

               Alignm length:
               106
               

               Alignm identity:
               86
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               67, 0
               

               Conread position:
               149-335
               

               Cow position:
               chr4:32693898-32693685 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               165
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               84, 0
               

               Conread position:
               149-352
               

               Cow position:
               chr4:22725200-22724988 (view UCSC Genome Browser custom track)
               

               Alignm length:
               217
               

               Alignm identity:
               161
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               83, 173
               

               Conread position:
               149-353
               

               Cow position:
               chr4:29805264-29805485 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               166
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               82, 0
               

               Conread position:
               149-354
               

               Cow position:
               chr4:37502923-37502702 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               164
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               9, 0
               

               Conread position:
               149-355
               

               Cow position:
               chr4:13222077-13222301 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               177
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               88, 206
               

               Conread position:
               149-355
               

               Cow position:
               chr4:19542242-19542018 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               166
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               88, 0
               

               Conread position:
               149-355
               

               Cow position:
               chr4:41185810-41186028 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               165
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               73, 168
               

               Conread position:
               150-230
               

               Cow position:
               chr4:54543555-54543635 (view UCSC Genome Browser custom track)
               

               Alignm length:
               81
               

               Alignm identity:
               73
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               150-353
               

               Cow position:
               chr4:32726333-32726109 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               170
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               75, 0
               

               Conread position:
               150-354
               

               Cow position:
               chr4:65950763-65950537 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               169
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               83, 40
               

               Conread position:
               150-355
               

               Cow position:
               chr4:13941565-13941344 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               177
               

               Alignm E-value:
               6.00036e-42
               

               Alignm gaps (pig, cow):
               80, 198
               

               Conread position:
               151-355
               

               Cow position:
               chr4:10056312-10056094 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               168
               

               Alignm E-value:
               8e-33
               

               Alignm gaps (pig, cow):
               70, 159
               

               Conread position:
               153-355
               

               Cow position:
               chr4:61451319-61451117 (view UCSC Genome Browser custom track)
               

               Alignm length:
               205
               

               Alignm identity:
               154
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               121, 76
               

               Conread position:
               154-353
               

               Cow position:
               chr4:46591772-46591548 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               174
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               79, 0
               

               Conread position:
               154-355
               

               Cow position:
               chr4:21017-20800 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               168
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               78, 194
               

               Conread position:
               159-355
               

               Cow position:
               chr4:14920086-14919876 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               162
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               73, 33
               

               Conread position:
               166-351
               

               Cow position:
               chr4:18107067-18107273 (view UCSC Genome Browser custom track)
               

               Alignm length:
               207
               

               Alignm identity:
               157
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               67, 0
               

               Conread position:
               168-355
               

               Cow position:
               chr4:22744390-22744206 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               136
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               32, 111
               

               Conread position:
               176-353
               

               Cow position:
               chr4:17474522-17474322 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               150
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               57, 0
               

               Conread position:
               176-355
               

               Cow position:
               chr4:6148849-6149030 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               135
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               61, 104
               

               Conread position:
               184-350
               

               Cow position:
               chr4:51739642-51739823 (view UCSC Genome Browser custom track)
               

               Alignm length:
               182
               

               Alignm identity:
               136
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               50, 0
               

               Conread position:
               188-355
               

               Cow position:
               chr4:54930351-54930539 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               144
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               44, 0
               

               Conread position:
               229-355
               

               Cow position:
               chr4:68855660-68855536 (view UCSC Genome Browser custom track)
               

               Alignm length:
               128
               

               Alignm identity:
               102
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               25, 8
               

               Conread position:
               230-355
               

               Cow position:
               chr4:30929616-30929482 (view UCSC Genome Browser custom track)
               

               Alignm length:
               135
               

               Alignm identity:
               107
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               23, 0
               

               Conread position:
               230-355
               

               Cow position:
               chr4:65538403-65538536 (view UCSC Genome Browser custom track)
               

               Alignm length:
               134
               

               Alignm identity:
               105
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               24, 0
               

               Conread position:
               232-344
               

               Cow position:
               chr4:2774725-2774609 (view UCSC Genome Browser custom track)
               

               Alignm length:
               117
               

               Alignm identity:
               94
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               22, 0
               

               Conread position:
               232-349
               

               Cow position:
               chr4:11671464-11671341 (view UCSC Genome Browser custom track)
               

               Alignm length:
               124
               

               Alignm identity:
               103
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               22, 0
               

               Conread position:
               232-353
               

               Cow position:
               chr4:25359610-25359493 (view UCSC Genome Browser custom track)
               

               Alignm length:
               123
               

               Alignm identity:
               100
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               22, 45
               

               Conread position:
               232-354
               

               Cow position:
               chr4:46720155-46720279 (view UCSC Genome Browser custom track)
               

               Alignm length:
               125
               

               Alignm identity:
               98
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               31, 0
               

               Conread position:
               232-355
               

               Cow position:
               chr4:11901549-11901680 (view UCSC Genome Browser custom track)
               

               Alignm length:
               133
               

               Alignm identity:
               106
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               22, 76
               

               Conread position:
               232-355
               

               Cow position:
               chr4:32259833-32259963 (view UCSC Genome Browser custom track)
               

               Alignm length:
               132
               

               Alignm identity:
               105
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               22, 116
               

               Conread position:
               232-355
               

               Cow position:
               chr4:35939995-35940125 (view UCSC Genome Browser custom track)
               

               Alignm length:
               131
               

               Alignm identity:
               104
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               22, 0
               

               Conread position:
               232-355
               

               Cow position:
               chr4:36577618-36577749 (view UCSC Genome Browser custom track)
               

               Alignm length:
               132
               

               Alignm identity:
               105
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               9, 0
               

               Conread position:
               232-355
               

               Cow position:
               chr4:43749801-43749927 (view UCSC Genome Browser custom track)
               

               Alignm length:
               128
               

               Alignm identity:
               103
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               20, 61
               

               Conread position:
               240-346
               

               Cow position:
               chr4:26683678-26683565 (view UCSC Genome Browser custom track)
               

               Alignm length:
               114
               

               Alignm identity:
               96
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               240-353
               

               Cow position:
               chr4:48137916-48137794 (view UCSC Genome Browser custom track)
               

               Alignm length:
               123
               

               Alignm identity:
               102
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               242-355
               

               Cow position:
               chr4:19561682-19561565 (view UCSC Genome Browser custom track)
               

               Alignm length:
               118
               

               Alignm identity:
               97
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               12, 0
               

               Conread position:
               242-355
               

               Cow position:
               chr4:68280835-68280943 (view UCSC Genome Browser custom track)
               

               Alignm length:
               115
               

               Alignm identity:
               94
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               12, 38
               

               Conread position:
               248-353
               

               Cow position:
               chr4:5047344-5047453 (view UCSC Genome Browser custom track)
               

               Alignm length:
               112
               

               Alignm identity:
               93
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               10, 69
               

               Conread position:
               277-353
               

               Cow position:
               chr4:38705815-38705891 (view UCSC Genome Browser custom track)
               

               Alignm length:
               77
               

               Alignm identity:
               71
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               277-355
               

               Cow position:
               chr4:57555930-57555852 (view UCSC Genome Browser custom track)
               

               Alignm length:
               79
               

               Alignm identity:
               71
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               0, 0
               
Show alignments to all cow chromosomes.
Conread position:	71-227
Cow position:	chr4:30250079-30250239 (view UCSC Genome Browser custom track)
Alignm length:	162
Alignm identity:	123
Alignm E-value:	4e-26
Alignm gaps (pig, cow):	12, 65
Conread position:	71-231
Cow position:	chr4:67393299-67393119 (view UCSC Genome Browser custom track)
Alignm length:	181
Alignm identity:	140
Alignm E-value:	1e-26
Alignm gaps (pig, cow):	16, 0
Conread position:	71-247
Cow position:	chr4:56805369-56805189 (view UCSC Genome Browser custom track)
Alignm length:	186
Alignm identity:	143
Alignm E-value:	5e-30
Alignm gaps (pig, cow):	17, 47
Conread position:	71-355
Cow position:	chr4:53209405-53209120 (view UCSC Genome Browser custom track)
Alignm length:	297
Alignm identity:	203
Alignm E-value:	1e-25
Alignm gaps (pig, cow):	44, 87
Conread position:	73-228
Cow position:	chr4:66168137-66168301 (view UCSC Genome Browser custom track)
Alignm length:	165
Alignm identity:	129
Alignm E-value:	5e-29
Alignm gaps (pig, cow):	49, 0
Conread position:	73-231
Cow position:	chr4:34510030-34509868 (view UCSC Genome Browser custom track)
Alignm length:	163
Alignm identity:	120
Alignm E-value:	3e-24
Alignm gaps (pig, cow):	45, 0
Conread position:	73-248
Cow position:	chr4:20124767-20124956 (view UCSC Genome Browser custom track)
Alignm length:	191
Alignm identity:	150
Alignm E-value:	2e-32
Alignm gaps (pig, cow):	49, 186
Conread position:	73-355
Cow position:	chr4:25356129-25356426 (view UCSC Genome Browser custom track)
Alignm length:	300
Alignm identity:	206
Alignm E-value:	2e-30
Alignm gaps (pig, cow):	52, 145
Conread position:	74-235
Cow position:	chr4:22331320-22331148 (view UCSC Genome Browser custom track)
Alignm length:	173
Alignm identity:	126
Alignm E-value:	6e-21
Alignm gaps (pig, cow):	66, 0
Conread position:	74-248
Cow position:	chr4:21520767-21520590 (view UCSC Genome Browser custom track)
Alignm length:	179
Alignm identity:	132
Alignm E-value:	4e-27
Alignm gaps (pig, cow):	43, 172
Conread position:	74-355
Cow position:	chr4:8801688-8801382 (view UCSC Genome Browser custom track)
Alignm length:	311
Alignm identity:	217
Alignm E-value:	1e-28
Alignm gaps (pig, cow):	48, 14
Conread position:	75-221
Cow position:	chr4:12748221-12748375 (view UCSC Genome Browser custom track)
Alignm length:	155
Alignm identity:	115
Alignm E-value:	6e-21
Alignm gaps (pig, cow):	14, 0
Conread position:	75-354
Cow position:	chr4:25227132-25226832 (view UCSC Genome Browser custom track)
Alignm length:	305
Alignm identity:	213
Alignm E-value:	4e-28
Alignm gaps (pig, cow):	47, 12
Conread position:	75-355
Cow position:	chr4:34310266-34310569 (view UCSC Genome Browser custom track)
Alignm length:	307
Alignm identity:	223
Alignm E-value:	1e-36
Alignm gaps (pig, cow):	43, 61
Conread position:	76-245
Cow position:	chr4:21112374-21112559 (view UCSC Genome Browser custom track)
Alignm length:	187
Alignm identity:	141
Alignm E-value:	3e-24
Alignm gaps (pig, cow):	11, 147
Conread position:	76-355
Cow position:	chr4:27530311-27529998 (view UCSC Genome Browser custom track)
Alignm length:	314
Alignm identity:	221
Alignm E-value:	4e-28
Alignm gaps (pig, cow):	7, 0
Conread position:	77-235
Cow position:	chr4:21506767-21506932 (view UCSC Genome Browser custom track)
Alignm length:	167
Alignm identity:	127
Alignm E-value:	3e-25
Alignm gaps (pig, cow):	23, 93
Conread position:	77-248
Cow position:	chr4:54938077-54937907 (view UCSC Genome Browser custom track)
Alignm length:	175
Alignm identity:	136
Alignm E-value:	2e-31
Alignm gaps (pig, cow):	37, 74
Conread position:	77-273
Cow position:	chr4:5790844-5790622 (view UCSC Genome Browser custom track)
Alignm length:	223
Alignm identity:	166
Alignm E-value:	1e-24
Alignm gaps (pig, cow):	11, 0
Conread position:	77-352
Cow position:	chr4:16513331-16513636 (view UCSC Genome Browser custom track)
Alignm length:	307
Alignm identity:	223
Alignm E-value:	8e-34
Alignm gaps (pig, cow):	43, 16