Cow genome map
| Conread name: | rcki31_e15.y1 |
| Conread position: | 241-448 |
| Cow position: | chr11:83043391-83043178 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 164 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 121, 11 |
| Conread position: | 241-465 |
| Cow position: | chr11:18914997-18915217 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 170 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 207, 25 |
| Conread position: | 246-442 |
| Cow position: | chr11:63165671-63165468 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 151 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 124, 20 |
| Conread position: | 246-443 |
| Cow position: | chr11:20205875-20205674 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 155 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 121, 7 |
| Conread position: | 246-462 |
| Cow position: | chr11:30830638-30830420 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 169 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 119, 20 |
| Conread position: | 247-366 |
| Cow position: | chr11:44636777-44636659 (view UCSC Genome Browser custom track) |
| Alignm length: | 120 |
| Alignm identity: | 96 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 247-366 |
| Cow position: | chr11:65767176-65767294 (view UCSC Genome Browser custom track) |
| Alignm length: | 120 |
| Alignm identity: | 93 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 247-369 |
| Cow position: | chr11:69119270-69119391 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 98 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 247-374 |
| Cow position: | chr11:30954977-30955103 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 98 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 247-422 |
| Cow position: | chr11:81162456-81162284 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 129 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 247-429 |
| Cow position: | chr11:18851885-18852073 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 137 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 107, 21 |
| Conread position: | 247-443 |
| Cow position: | chr11:2917609-2917409 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 154 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 119, 19 |
| Conread position: | 247-451 |
| Cow position: | chr11:29960275-29960486 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 159 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 116, 19 |
| Conread position: | 247-453 |
| Cow position: | chr11:30867160-30867371 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 155 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 123, 19 |
| Conread position: | 247-458 |
| Cow position: | chr11:30355035-30355243 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 158 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 162, 19 |
| Conread position: | 247-460 |
| Cow position: | chr11:897650-897864 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 155 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 118, 19 |
| Conread position: | 247-461 |
| Cow position: | chr11:23407441-23407662 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 164 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 120, 20 |
| Conread position: | 247-466 |
| Cow position: | chr11:55052848-55053071 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 156 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 123, 19 |
| Conread position: | 247-467 |
| Cow position: | chr11:15285638-15285415 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 161 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 123, 18 |
| Conread position: | 247-468 |
| Cow position: | chr11:16342252-16342039 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 162 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 115, 19 |
| Conread position: | 247-470 |
| Cow position: | chr11:27746900-27747131 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 172 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 104, 18 |
| Conread position: | 248-442 |
| Cow position: | chr11:74316687-74316889 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 149 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 114, 18 |
| Conread position: | 248-446 |
| Cow position: | chr11:13061258-13061067 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 147 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 102, 18 |
| Conread position: | 255-448 |
| Cow position: | chr11:66041261-66041462 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 142 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 16, 147 |
| Conread position: | 256-438 |
| Cow position: | chr11:63484923-63485111 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 138 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 108, 15 |
| Conread position: | 257-438 |
| Cow position: | chr11:17721815-17721622 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 146 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 106, 8 |
| Conread position: | 258-366 |
| Cow position: | chr11:71021988-71022095 (view UCSC Genome Browser custom track) |
| Alignm length: | 109 |
| Alignm identity: | 89 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 7, 0 |
| Conread position: | 259-448 |
| Cow position: | chr11:17036539-17036343 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 146 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 104, 8 |
| Conread position: | 259-452 |
| Cow position: | chr11:46922897-46922694 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 154 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 89, 7 |
| Conread position: | 261-454 |
| Cow position: | chr11:48900856-48900664 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 139 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 6, 131 |
| Conread position: | 262-367 |
| Cow position: | chr11:31352561-31352456 (view UCSC Genome Browser custom track) |
| Alignm length: | 106 |
| Alignm identity: | 85 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 262-442 |
| Cow position: | chr11:58813080-58812897 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 134 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 69, 38 |
| Conread position: | 262-443 |
| Cow position: | chr11:30986632-30986820 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 141 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 114, 31 |
| Conread position: | 262-444 |
| Cow position: | chr11:22884404-22884591 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 137 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 106, 28 |
| Conread position: | 263-362 |
| Cow position: | chr11:62372766-62372864 (view UCSC Genome Browser custom track) |
| Alignm length: | 100 |
| Alignm identity: | 85 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 94, 0 |
| Conread position: | 263-366 |
| Cow position: | chr11:15382511-15382408 (view UCSC Genome Browser custom track) |
| Alignm length: | 104 |
| Alignm identity: | 84 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 263-366 |
| Cow position: | chr11:79019067-79018964 (view UCSC Genome Browser custom track) |
| Alignm length: | 104 |
| Alignm identity: | 85 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 263-412 |
| Cow position: | chr11:84764028-84764175 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 118 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 101, 30 |
| Conread position: | 263-430 |
| Cow position: | chr11:28993746-28993577 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 129 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 92, 67 |
| Conread position: | 263-436 |
| Cow position: | chr11:17083318-17083136 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 136 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 105, 0 |
| Conread position: | 263-441 |
| Cow position: | chr11:24601956-24602141 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 140 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 60, 143 |
| Conread position: | 263-442 |
| Cow position: | chr11:11469656-11469474 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 137 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 103, 139 |
| Conread position: | 263-442 |
| Cow position: | chr11:18447500-18447318 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 140 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 103, 138 |
| Conread position: | 263-442 |
| Cow position: | chr11:38639103-38639282 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 129 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 113, 132 |
| Conread position: | 263-442 |
| Cow position: | chr11:51196091-51195914 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 127 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 130, 0 |
| Conread position: | 263-442 |
| Cow position: | chr11:64104990-64105176 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 140 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 77, 26 |
| Conread position: | 263-442 |
| Cow position: | chr11:82740501-82740675 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 132 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 130, 0 |
| Conread position: | 263-442 |
| Cow position: | chr11:83032672-83032860 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 146 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 97, 141 |
| Conread position: | 263-443 |
| Cow position: | chr11:44032003-44032190 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 152 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 107, 143 |
| Conread position: | 263-443 |
| Cow position: | chr11:62789122-62789311 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 146 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 103, 141 |
| Conread position: | 263-443 |
| Cow position: | chr11:62812958-62812768 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 144 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 103, 142 |
| Conread position: | 263-444 |
| Cow position: | chr11:33409270-33409081 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 142 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 104, 146 |
| Conread position: | 263-444 |
| Cow position: | chr11:63469867-63470043 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 133 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 168, 100 |
| Conread position: | 263-444 |
| Cow position: | chr11:80639558-80639367 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 145 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 14, 144 |
| Conread position: | 263-446 |
| Cow position: | chr11:47899260-47899437 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 140 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 100, 0 |
| Conread position: | 263-446 |
| Cow position: | chr11:80820011-80819838 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 145 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 32, 0 |
| Conread position: | 263-447 |
| Cow position: | chr11:30210896-30211073 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 134 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 89, 106 |
| Conread position: | 263-448 |
| Cow position: | chr11:49152941-49153129 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 135 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 126, 33 |
| Conread position: | 263-448 |
| Cow position: | chr11:55494671-55494853 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 149 |
| Alignm E-value: | 3.99931e-42 |
| Alignm gaps (pig, cow): | 141, 0 |
| Conread position: | 263-452 |
| Cow position: | chr11:67614930-67614732 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 152 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 103, 141 |
| Conread position: | 263-453 |
| Cow position: | chr11:2925304-2925113 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 146 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 107, 45 |
| Conread position: | 263-453 |
| Cow position: | chr11:15607980-15607795 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 146 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 81, 34 |
| Conread position: | 263-453 |
| Cow position: | chr11:27462106-27461917 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 137 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 96, 33 |
| Conread position: | 263-453 |
| Cow position: | chr11:64044225-64044411 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 149 |
| Alignm E-value: | 8e-39 |
| Alignm gaps (pig, cow): | 100, 0 |
| Conread position: | 263-457 |
| Cow position: | chr11:20238668-20238873 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 152 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 100, 144 |
| Conread position: | 263-458 |
| Cow position: | chr11:18698871-18699070 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 144 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 104, 133 |
| Conread position: | 263-458 |
| Cow position: | chr11:27248485-27248687 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 147 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 103, 31 |
| Conread position: | 263-461 |
| Cow position: | chr11:9699253-9699054 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 146 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 104, 134 |
| Conread position: | 263-461 |
| Cow position: | chr11:17195839-17195649 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 141 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 144, 78 |
| Conread position: | 263-461 |
| Cow position: | chr11:48315405-48315197 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 154 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 100, 142 |
| Conread position: | 263-462 |
| Cow position: | chr11:56114930-56115141 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 160 |
| Alignm E-value: | 9e-30 |
| Alignm gaps (pig, cow): | 32, 144 |
| Conread position: | 263-462 |
| Cow position: | chr11:62620368-62620580 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 168 |
| Alignm E-value: | 7e-38 |
| Alignm gaps (pig, cow): | 103, 144 |
| Conread position: | 263-464 |
| Cow position: | chr11:62663240-62663042 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 156 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 112, 33 |
| Conread position: | 263-464 |
| Cow position: | chr11:63478369-63478570 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 159 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 107, 43 |
| Conread position: | 263-464 |
| Cow position: | chr11:71390569-71390369 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 150 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 101, 55 |
| Conread position: | 263-465 |
| Cow position: | chr11:19579024-19578820 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 153 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 103, 78 |
| Conread position: | 263-472 |
| Cow position: | chr11:50937754-50937542 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 151 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 80, 118 |
| Conread position: | 265-462 |
| Cow position: | chr11:62239738-62239944 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 153 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 102, 0 |
| Conread position: | 266-374 |
| Cow position: | chr11:3790836-3790945 (view UCSC Genome Browser custom track) |
| Alignm length: | 110 |
| Alignm identity: | 89 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 7, 0 |
| Conread position: | 266-430 |
| Cow position: | chr11:73354065-73353896 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 124 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 101, 139 |
| Conread position: | 266-436 |
| Cow position: | chr11:55761863-55762033 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 125 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 92, 121 |
| Conread position: | 266-438 |
| Cow position: | chr11:51729281-51729453 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 135 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 112, 129 |
| Conread position: | 266-438 |
| Cow position: | chr11:63920059-63919888 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 126 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 117, 0 |
| Conread position: | 266-442 |
| Cow position: | chr11:80586269-80586448 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 132 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 98, 138 |
| Conread position: | 266-446 |
| Cow position: | chr11:35669957-35669779 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 132 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 130, 62 |
| Conread position: | 266-461 |
| Cow position: | chr11:48296028-48296227 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 146 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 100, 20 |
| Conread position: | 266-463 |
| Cow position: | chr11:15366978-15366777 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 150 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 98, 135 |
| Conread position: | 266-463 |
| Cow position: | chr11:31227957-31228157 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 145 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 104, 146 |
| Conread position: | 266-465 |
| Cow position: | chr11:63866665-63866454 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 157 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 74, 138 |
| Conread position: | 266-466 |
| Cow position: | chr11:77017236-77017438 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 140 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 76, 130 |
| Conread position: | 266-470 |
| Cow position: | chr11:39462618-39462831 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 153 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 104, 135 |
| Conread position: | 266-471 |
| Cow position: | chr11:17676378-17676163 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 153 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 101, 142 |
| Conread position: | 266-472 |
| Cow position: | chr11:13500010-13500221 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 147 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 100, 185 |
| Conread position: | 267-453 |
| Cow position: | chr11:41173-41364 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 136 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 50, 0 |
| Conread position: | 267-462 |
| Cow position: | chr11:75874759-75874569 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 148 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 84, 0 |
| Conread position: | 268-430 |
| Cow position: | chr11:42296623-42296456 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 130 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 119, 0 |
| Conread position: | 268-442 |
| Cow position: | chr11:25320182-25320347 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 136 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 102, 0 |
| Conread position: | 270-438 |
| Cow position: | chr11:48544436-48544615 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 136 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 67, 137 |
| Conread position: | 270-442 |
| Cow position: | chr11:30843020-30842842 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 136 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 89, 130 |
| Conread position: | 270-447 |
| Cow position: | chr11:67600783-67600966 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 133 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 87, 136 |
| Conread position: | 270-466 |
| Cow position: | chr11:81614515-81614316 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 140 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 82, 76 |
| Conread position: | 270-467 |
| Cow position: | chr11:67948743-67948545 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 153 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 174, 121 |
| Conread position: | 270-468 |
| Cow position: | chr11:48512163-48512351 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 141 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 271-442 |
| Cow position: | chr11:58185882-58186055 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 135 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 93, 131 |
| Conread position: | 271-452 |
| Cow position: | chr11:47724898-47725082 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 142 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 97, 19 |
| Conread position: | 271-472 |
| Cow position: | chr11:80008068-80007863 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 147 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 99, 66 |
| Conread position: | 272-445 |
| Cow position: | chr11:54872756-54872574 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 143 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 61, 12 |
| Conread position: | 272-447 |
| Cow position: | chr11:80296852-80296671 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 137 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 79, 132 |
| Conread position: | 274-441 |
| Cow position: | chr11:41603683-41603519 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 123 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 59, 0 |
| Conread position: | 274-460 |
| Cow position: | chr11:16801954-16801777 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 136 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 88, 0 |
| Conread position: | 281-439 |
| Cow position: | chr11:45435090-45435255 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 124 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 81, 0 |
| Conread position: | 281-451 |
| Cow position: | chr11:40818617-40818441 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 136 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 81, 121 |
| Conread position: | 281-469 |
| Cow position: | chr11:13684701-13684511 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 144 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 85, 116 |
| Conread position: | 283-436 |
| Cow position: | chr11:18572812-18572960 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 113 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 87, 0 |
| Conread position: | 283-437 |
| Cow position: | chr11:21852290-21852138 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 113 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 115, 0 |
| Conread position: | 283-443 |
| Cow position: | chr11:19500780-19500620 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 124 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 85, 104 |
| Conread position: | 283-457 |
| Cow position: | chr11:45631754-45631583 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 129 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 113, 0 |
| Conread position: | 283-458 |
| Cow position: | chr11:45671358-45671181 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 132 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 81, 120 |
| Conread position: | 283-462 |
| Cow position: | chr11:4411857-4411679 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 130 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 124, 97 |
| Conread position: | 283-462 |
| Cow position: | chr11:62483950-62483771 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 136 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 79, 110 |
| Conread position: | 283-464 |
| Cow position: | chr11:68570369-68570175 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 144 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 81, 0 |
| Conread position: | 283-469 |
| Cow position: | chr11:4621419-4621225 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 143 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 93, 0 |
| Conread position: | 283-470 |
| Cow position: | chr11:13405021-13404840 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 138 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 95, 117 |
| Conread position: | 284-431 |
| Cow position: | chr11:53318568-53318707 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 114 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 37, 0 |
| Conread position: | 284-438 |
| Cow position: | chr11:27661430-27661578 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 114 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 92, 0 |
| Conread position: | 284-438 |
| Cow position: | chr11:36647356-36647506 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 116 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 85, 0 |
| Conread position: | 284-442 |
| Cow position: | chr11:77546428-77546579 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 118 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 78, 0 |
| Conread position: | 284-453 |
| Cow position: | chr11:42083481-42083647 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 127 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 80, 0 |
| Conread position: | 284-453 |
| Cow position: | chr11:74839623-74839797 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 139 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 82, 119 |
| Conread position: | 284-458 |
| Cow position: | chr11:46499023-46499190 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 130 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 112, 84 |
| Conread position: | 284-462 |
| Cow position: | chr11:71806138-71805963 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 129 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 74, 0 |
| Conread position: | 284-469 |
| Cow position: | chr11:17278663-17278477 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 142 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 89, 97 |
| Conread position: | 284-472 |
| Cow position: | chr11:34430222-34430406 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 138 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 156, 70 |
| Conread position: | 284-472 |
| Cow position: | chr11:77013793-77013983 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 142 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 74, 64 |
| Conread position: | 285-457 |
| Cow position: | chr11:25721981-25721807 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 141 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 82, 24 |
| Conread position: | 286-442 |
| Cow position: | chr11:9270711-9270555 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 116 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 121, 57 |
| Conread position: | 286-442 |
| Cow position: | chr11:35276284-35276434 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 123 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 84, 10 |
| Conread position: | 286-442 |
| Cow position: | chr11:48247047-48246895 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 120 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 107, 0 |
| Conread position: | 286-453 |
| Cow position: | chr11:75918603-75918773 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 128 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 18, 109 |
| Conread position: | 286-462 |
| Cow position: | chr11:33348172-33347996 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 126 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 101, 62 |
| Conread position: | 287-456 |
| Cow position: | chr11:17227629-17227454 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 128 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 80, 119 |
| Conread position: | 287-458 |
| Cow position: | chr11:77227553-77227731 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 133 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 14, 112 |
| Conread position: | 290-436 |
| Cow position: | chr11:43360766-43360610 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 125 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 9, 120 |
| Conread position: | 290-453 |
| Cow position: | chr11:6194417-6194582 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 126 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 80, 43 |
| Conread position: | 290-462 |
| Cow position: | chr11:18785857-18785695 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 135 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 11, 0 |
| Conread position: | 290-470 |
| Cow position: | chr11:8422099-8421914 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 135 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 78, 112 |
| Conread position: | 294-448 |
| Cow position: | chr11:57170578-57170420 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 124 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 16, 104 |
| Conread position: | 296-465 |
| Cow position: | chr11:17559155-17559320 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 123 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 57, 52 |
| Conread position: | 298-442 |
| Cow position: | chr11:38194221-38194360 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 112 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 53, 0 |
| Conread position: | 298-443 |
| Cow position: | chr11:65565100-65564957 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 111 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 95, 0 |
| Conread position: | 298-457 |
| Cow position: | chr11:49057418-49057579 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 128 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 72, 106 |
| Conread position: | 301-463 |
| Cow position: | chr11:15950057-15949897 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 122 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 63, 91 |
| Conread position: | 301-464 |
| Cow position: | chr11:17369560-17369731 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 130 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 51, 47 |
| Conread position: | 301-464 |
| Cow position: | chr11:18484159-18483995 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 125 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 68, 94 |
| Conread position: | 302-442 |
| Cow position: | chr11:1841994-1842140 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 114 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 66, 98 |
| Conread position: | 309-444 |
| Cow position: | chr11:3267618-3267483 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 108 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 56, 39 |
Show alignments to all cow chromosomes.