Cow genome map

Conread name: rcki31_e15.y1

Conread position: 241-366
Cow position: chr14:33751588-33751468 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 100
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 12, 0

Conread position: 241-452
Cow position: chr14:41749707-41749923 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 157
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 100, 17

Conread position: 246-459
Cow position: chr14:20826538-20826316 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 164
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 95, 8

Conread position: 246-462
Cow position: chr14:31177238-31177456 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 161
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 52, 21

Conread position: 246-469
Cow position: chr14:23682312-23682082 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 165
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 90, 20

Conread position: 247-366
Cow position: chr14:9308277-9308160 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 96
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 19, 0

Conread position: 247-366
Cow position: chr14:10078316-10078198 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 99
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 19, 0

Conread position: 247-442
Cow position: chr14:11729062-11729264 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 152
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 109, 19

Conread position: 247-442
Cow position: chr14:21224686-21224486 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 151
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 42, 19

Conread position: 247-450
Cow position: chr14:19189092-19188888 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 151
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 84, 19

Conread position: 247-453
Cow position: chr14:12954337-12954541 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 150
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 111, 21

Conread position: 247-453
Cow position: chr14:47170306-47170518 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 153
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 115, 19

Conread position: 247-456
Cow position: chr14:16549955-16550166 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 158
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 107, 20

Conread position: 247-456
Cow position: chr14:41210903-41210693 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 151
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 93, 19

Conread position: 247-457
Cow position: chr14:13846033-13845820 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 165
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 123, 19

Conread position: 247-460
Cow position: chr14:15997717-15997927 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 161
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 187, 19

Conread position: 247-461
Cow position: chr14:36254648-36254870 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 165
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 119, 19

Conread position: 248-446
Cow position: chr14:39918700-39918896 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 144
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 136, 18

Conread position: 248-452
Cow position: chr14:10706922-10706710 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 162
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 119, 17

Conread position: 257-444
Cow position: chr14:2038770-2038945 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 147
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 9, 0

Conread position: 259-454
Cow position: chr14:14622142-14622337 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 145
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 105, 7

Conread position: 260-421
Cow position: chr14:3173702-3173862 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 126
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 104, 6

Conread position: 260-461
Cow position: chr14:4848382-4848174 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 155
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 116, 6

Conread position: 262-457
Cow position: chr14:20736645-20736442 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 145
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 108, 0

Conread position: 262-462
Cow position: chr14:41156690-41156897 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 144
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 108, 0

Conread position: 263-366
Cow position: chr14:24580673-24580571 (view UCSC Genome Browser custom track)
Alignm length: 104
Alignm identity: 86
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 85, 0

Conread position: 263-438
Cow position: chr14:25903564-25903379 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 141
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 103, 0

Conread position: 263-442
Cow position: chr14:11643217-11643403 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 139
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 107, 18

Conread position: 263-442
Cow position: chr14:36775682-36775506 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 147
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 80, 33

Conread position: 263-455
Cow position: chr14:49824589-49824783 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 150
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 100, 31

Conread position: 263-457
Cow position: chr14:20110689-20110896 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 159
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 104, 142

Conread position: 263-457
Cow position: chr14:48213113-48212929 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 138
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 173, 51

Conread position: 263-461
Cow position: chr14:13731065-13731274 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 160
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 60, 147

Conread position: 263-466
Cow position: chr14:29734331-29734542 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 154
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 99, 164

Conread position: 263-467
Cow position: chr14:20640597-20640809 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 161
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 101, 18

Conread position: 263-467
Cow position: chr14:45677263-45677050 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 159
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 79, 83

Conread position: 263-468
Cow position: chr14:42154939-42155149 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 151
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 90, 43

Conread position: 264-470
Cow position: chr14:8848297-8848095 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 155
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 102, 41

Conread position: 265-461
Cow position: chr14:8541181-8541382 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 147
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 91, 141

Conread position: 266-366
Cow position: chr14:22941698-22941798 (view UCSC Genome Browser custom track)
Alignm length: 101
Alignm identity: 83
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 266-430
Cow position: chr14:46998069-46997907 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 118
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 125, 0

Conread position: 266-442
Cow position: chr14:38355218-38355051 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 126
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 105, 0

Conread position: 266-444
Cow position: chr14:35503392-35503204 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 134
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 60, 0

Conread position: 266-451
Cow position: chr14:8707579-8707391 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 144
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 97, 16

Conread position: 266-453
Cow position: chr14:10858463-10858272 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 143
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 79, 139

Conread position: 266-460
Cow position: chr14:23424289-23424092 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 147
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 101, 26

Conread position: 266-461
Cow position: chr14:23443050-23442851 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 148
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 101, 26

Conread position: 266-467
Cow position: chr14:4877201-4877411 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 151
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 82, 27

Conread position: 266-470
Cow position: chr14:13928599-13928397 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 146
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 62, 101

Conread position: 267-427
Cow position: chr14:34083136-34083291 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 118
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 84, 0

Conread position: 267-438
Cow position: chr14:18309278-18309453 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 132
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 97, 132

Conread position: 267-459
Cow position: chr14:41837843-41838032 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 151
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 97, 121

Conread position: 267-462
Cow position: chr14:40754218-40754423 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 153
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 87, 76

Conread position: 267-470
Cow position: chr14:25225757-25225547 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 143
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 116, 0

Conread position: 267-472
Cow position: chr14:1868770-1868975 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 150
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 84, 135

Conread position: 270-438
Cow position: chr14:19349862-19349695 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 121
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 105, 127

Conread position: 270-466
Cow position: chr14:22989060-22988854 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 151
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 96, 135

Conread position: 270-466
Cow position: chr14:24416904-24416716 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 151
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 30, 87

Conread position: 270-471
Cow position: chr14:19827458-19827660 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 152
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 89, 126

Conread position: 271-465
Cow position: chr14:12244359-12244562 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 157
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 7, 78

Conread position: 274-427
Cow position: chr14:12127388-12127539 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 118
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 116, 0

Conread position: 277-448
Cow position: chr14:2712004-2712169 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 130
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 89, 21

Conread position: 277-467
Cow position: chr14:109471-109661 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 148
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 23, 19

Conread position: 281-429
Cow position: chr14:7959802-7959654 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 115
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 89, 114

Conread position: 281-430
Cow position: chr14:11280098-11280258 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 126
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 82, 125

Conread position: 282-469
Cow position: chr14:33618317-33618124 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 141
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 84, 75

Conread position: 282-471
Cow position: chr14:12505623-12505804 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 145
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 7, 0

Conread position: 283-430
Cow position: chr14:23712694-23712550 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 112
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 65, 0

Conread position: 283-441
Cow position: chr14:45167113-45167270 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 116
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 93, 111

Conread position: 283-441
Cow position: chr14:46114139-46114295 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 119
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 19, 86

Conread position: 283-442
Cow position: chr14:33247416-33247577 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 125
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 87, 119

Conread position: 283-453
Cow position: chr14:40208911-40208739 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 128
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 38, 116

Conread position: 283-455
Cow position: chr14:44084476-44084644 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 130
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 113, 0

Conread position: 283-459
Cow position: chr14:41267719-41267897 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 138
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 84, 119

Conread position: 283-463
Cow position: chr14:35509196-35509025 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 132
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 158, 64

Conread position: 283-468
Cow position: chr14:13809953-13809773 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 139
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 85, 0

Conread position: 283-469
Cow position: chr14:12634869-12635061 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 137
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 83, 41

Conread position: 284-455
Cow position: chr14:10721695-10721870 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 133
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 73, 6

Conread position: 284-458
Cow position: chr14:18345716-18345898 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 132
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 94, 0

Conread position: 284-460
Cow position: chr14:36289785-36289966 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 135
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 22, 116

Conread position: 284-469
Cow position: chr14:12511885-12512074 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 141
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 71, 33

Conread position: 284-470
Cow position: chr14:41252979-41253163 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 131
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 48, 12

Conread position: 285-438
Cow position: chr14:24845978-24845826 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 119
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 78, 110

Conread position: 285-460
Cow position: chr14:40212264-40212093 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 127
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 14, 0

Conread position: 286-442
Cow position: chr14:4838257-4838415 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 115
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 93, 137

Conread position: 286-448
Cow position: chr14:24387452-24387288 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 126
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 13, 112

Conread position: 286-458
Cow position: chr14:16256769-16256600 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 134
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 154, 82

Conread position: 286-463
Cow position: chr14:29723577-29723754 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 129
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 80, 38

Conread position: 286-472
Cow position: chr14:38747689-38747491 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 146
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 7, 141

Conread position: 290-456
Cow position: chr14:40806605-40806770 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 128
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 77, 104

Conread position: 291-440
Cow position: chr14:19633233-19633090 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 117
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 52, 56

Conread position: 301-468
Cow position: chr14:20667013-20667189 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 134
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 66, 108

Show alignments to all cow chromosomes.