Cow genome map
| Conread name: | rcki31_e15.y1 |
| Conread position: | 234-375 |
| Cow position: | chr18:55403845-55403987 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 104 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 242-455 |
| Cow position: | chr18:12113407-12113189 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 155 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 141, 9 |
| Conread position: | 246-443 |
| Cow position: | chr18:42479626-42479413 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 158 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 124, 21 |
| Conread position: | 246-444 |
| Cow position: | chr18:32189547-32189349 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 151 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 107, 19 |
| Conread position: | 246-472 |
| Cow position: | chr18:54130371-54130145 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 168 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 77, 20 |
| Conread position: | 247-373 |
| Cow position: | chr18:56183896-56184021 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 100 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 247-374 |
| Cow position: | chr18:11672004-11672129 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 98 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 247-433 |
| Cow position: | chr18:25006532-25006349 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 141 |
| Alignm E-value: | 9e-34 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 247-440 |
| Cow position: | chr18:47183332-47183149 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 140 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 247-440 |
| Cow position: | chr18:49015090-49015280 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 145 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 97, 19 |
| Conread position: | 247-442 |
| Cow position: | chr18:31711603-31711411 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 145 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 51, 19 |
| Conread position: | 247-442 |
| Cow position: | chr18:47511967-47512161 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 144 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 105, 19 |
| Conread position: | 247-443 |
| Cow position: | chr18:22569105-22568901 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 149 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 121, 19 |
| Conread position: | 247-443 |
| Cow position: | chr18:49100407-49100218 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 151 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 247-444 |
| Cow position: | chr18:49038423-49038622 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 139 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 123, 19 |
| Conread position: | 247-448 |
| Cow position: | chr18:14225355-14225561 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 147 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 94, 19 |
| Conread position: | 247-448 |
| Cow position: | chr18:38806547-38806739 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 147 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 247-453 |
| Cow position: | chr18:46452921-46452706 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 152 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 19, 155 |
| Conread position: | 247-457 |
| Cow position: | chr18:23630643-23630434 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 159 |
| Alignm E-value: | 8e-32 |
| Alignm gaps (pig, cow): | 123, 19 |
| Conread position: | 247-457 |
| Cow position: | chr18:43796994-43796777 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 169 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 120, 19 |
| Conread position: | 247-461 |
| Cow position: | chr18:44262592-44262808 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 165 |
| Alignm E-value: | 8e-33 |
| Alignm gaps (pig, cow): | 32, 19 |
| Conread position: | 247-461 |
| Cow position: | chr18:50082296-50082095 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 162 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 192, 19 |
| Conread position: | 247-462 |
| Cow position: | chr18:2146618-2146404 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 165 |
| Alignm E-value: | 6e-40 |
| Alignm gaps (pig, cow): | 184, 19 |
| Conread position: | 247-462 |
| Cow position: | chr18:20462734-20462520 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 151 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 75, 19 |
| Conread position: | 247-467 |
| Cow position: | chr18:35367231-35367015 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 163 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 93, 19 |
| Conread position: | 248-365 |
| Cow position: | chr18:52649385-52649269 (view UCSC Genome Browser custom track) |
| Alignm length: | 118 |
| Alignm identity: | 93 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 252-447 |
| Cow position: | chr18:51383431-51383227 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 154 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 118, 14 |
| Conread position: | 256-452 |
| Cow position: | chr18:22790118-22789912 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 161 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 111, 11 |
| Conread position: | 257-442 |
| Cow position: | chr18:29474715-29474904 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 135 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 130, 9 |
| Conread position: | 259-373 |
| Cow position: | chr18:53038803-53038918 (view UCSC Genome Browser custom track) |
| Alignm length: | 118 |
| Alignm identity: | 96 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 85, 7 |
| Conread position: | 259-449 |
| Cow position: | chr18:15172983-15173177 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 143 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 28, 143 |
| Conread position: | 259-453 |
| Cow position: | chr18:42431638-42431433 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 151 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 103, 7 |
| Conread position: | 259-465 |
| Cow position: | chr18:48713524-48713732 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 166 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 107, 7 |
| Conread position: | 260-442 |
| Cow position: | chr18:29648758-29648946 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 142 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 110, 6 |
| Conread position: | 260-471 |
| Cow position: | chr18:43400742-43400531 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 146 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 108, 153 |
| Conread position: | 262-363 |
| Cow position: | chr18:44801914-44801813 (view UCSC Genome Browser custom track) |
| Alignm length: | 102 |
| Alignm identity: | 86 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 262-446 |
| Cow position: | chr18:51594829-51594645 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 134 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 167, 131 |
| Conread position: | 262-459 |
| Cow position: | chr18:44917732-44917935 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 152 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 104, 190 |
| Conread position: | 262-466 |
| Cow position: | chr18:18339976-18339773 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 152 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 62, 140 |
| Conread position: | 263-366 |
| Cow position: | chr18:17660584-17660481 (view UCSC Genome Browser custom track) |
| Alignm length: | 104 |
| Alignm identity: | 84 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 263-366 |
| Cow position: | chr18:39875283-39875181 (view UCSC Genome Browser custom track) |
| Alignm length: | 104 |
| Alignm identity: | 88 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 62, 0 |
| Conread position: | 263-371 |
| Cow position: | chr18:11684958-11685066 (view UCSC Genome Browser custom track) |
| Alignm length: | 109 |
| Alignm identity: | 87 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 263-424 |
| Cow position: | chr18:29356648-29356485 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 123 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 92, 134 |
| Conread position: | 263-431 |
| Cow position: | chr18:7416898-7417064 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 121 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 133, 0 |
| Conread position: | 263-435 |
| Cow position: | chr18:29065407-29065233 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 133 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 121, 54 |
| Conread position: | 263-436 |
| Cow position: | chr18:43125062-43125239 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 138 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 93, 61 |
| Conread position: | 263-438 |
| Cow position: | chr18:9365895-9366084 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 145 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 10, 144 |
| Conread position: | 263-442 |
| Cow position: | chr18:8171109-8170925 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 143 |
| Alignm E-value: | 8e-33 |
| Alignm gaps (pig, cow): | 104, 140 |
| Conread position: | 263-442 |
| Cow position: | chr18:10590696-10590876 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 129 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 81, 102 |
| Conread position: | 263-442 |
| Cow position: | chr18:38937797-38937986 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 147 |
| Alignm E-value: | 7e-31 |
| Alignm gaps (pig, cow): | 105, 142 |
| Conread position: | 263-442 |
| Cow position: | chr18:48407715-48407898 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 132 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 101, 0 |
| Conread position: | 263-443 |
| Cow position: | chr18:28930660-28930474 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 146 |
| Alignm E-value: | 9e-34 |
| Alignm gaps (pig, cow): | 100, 136 |
| Conread position: | 263-446 |
| Cow position: | chr18:49981463-49981288 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 144 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 100, 0 |
| Conread position: | 263-448 |
| Cow position: | chr18:1954613-1954408 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 155 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 98, 0 |
| Conread position: | 263-448 |
| Cow position: | chr18:50004726-50004534 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 149 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 105, 31 |
| Conread position: | 263-448 |
| Cow position: | chr18:52877337-52877520 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 138 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 130, 0 |
| Conread position: | 263-451 |
| Cow position: | chr18:11578050-11578231 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 142 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 100, 0 |
| Conread position: | 263-451 |
| Cow position: | chr18:35786032-35786228 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 141 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 100, 0 |
| Conread position: | 263-453 |
| Cow position: | chr18:47802114-47801919 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 151 |
| Alignm E-value: | 7e-31 |
| Alignm gaps (pig, cow): | 100, 26 |
| Conread position: | 263-454 |
| Cow position: | chr18:55119848-55120045 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 146 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 36, 139 |
| Conread position: | 263-456 |
| Cow position: | chr18:9010684-9010885 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 150 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 103, 138 |
| Conread position: | 263-457 |
| Cow position: | chr18:20126283-20126474 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 145 |
| Alignm E-value: | 8e-32 |
| Alignm gaps (pig, cow): | 185, 39 |
| Conread position: | 263-457 |
| Cow position: | chr18:25598256-25598053 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 149 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 100, 142 |
| Conread position: | 263-457 |
| Cow position: | chr18:49603067-49602862 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 159 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 105, 193 |
| Conread position: | 263-460 |
| Cow position: | chr18:15613884-15613684 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 148 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 104, 139 |
| Conread position: | 263-461 |
| Cow position: | chr18:18843990-18844195 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 162 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 12, 40 |
| Conread position: | 263-461 |
| Cow position: | chr18:41257926-41257731 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 139 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 59, 33 |
| Conread position: | 263-463 |
| Cow position: | chr18:45558123-45558331 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 155 |
| Alignm E-value: | 8e-33 |
| Alignm gaps (pig, cow): | 27, 0 |
| Conread position: | 263-466 |
| Cow position: | chr18:22180792-22180592 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 157 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 105, 15 |
| Conread position: | 263-466 |
| Cow position: | chr18:33299880-33300076 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 153 |
| Alignm E-value: | 8e-32 |
| Alignm gaps (pig, cow): | 189, 100 |
| Conread position: | 263-469 |
| Cow position: | chr18:6075419-6075214 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 149 |
| Alignm E-value: | 7e-31 |
| Alignm gaps (pig, cow): | 176, 101 |
| Conread position: | 263-471 |
| Cow position: | chr18:6470071-6470287 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 161 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 99, 147 |
| Conread position: | 263-472 |
| Cow position: | chr18:2793995-2793779 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 162 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 100, 138 |
| Conread position: | 263-472 |
| Cow position: | chr18:15809824-15809611 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 167 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 80, 40 |
| Conread position: | 263-472 |
| Cow position: | chr18:50637495-50637296 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 154 |
| Alignm E-value: | 7e-31 |
| Alignm gaps (pig, cow): | 57, 0 |
| Conread position: | 264-451 |
| Cow position: | chr18:51302095-51301914 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 133 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 5, 0 |
| Conread position: | 264-464 |
| Cow position: | chr18:21187283-21187485 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 149 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 77, 135 |
| Conread position: | 266-366 |
| Cow position: | chr18:22214467-22214567 (view UCSC Genome Browser custom track) |
| Alignm length: | 101 |
| Alignm identity: | 82 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 266-367 |
| Cow position: | chr18:8163836-8163735 (view UCSC Genome Browser custom track) |
| Alignm length: | 102 |
| Alignm identity: | 84 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 266-438 |
| Cow position: | chr18:46048731-46048916 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 140 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 95, 140 |
| Conread position: | 266-440 |
| Cow position: | chr18:47693045-47693218 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 135 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 98, 133 |
| Conread position: | 266-441 |
| Cow position: | chr18:5647792-5647973 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 131 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 104, 135 |
| Conread position: | 266-443 |
| Cow position: | chr18:28322636-28322819 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 137 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 89, 139 |
| Conread position: | 266-445 |
| Cow position: | chr18:31159294-31159103 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 144 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 82, 140 |
| Conread position: | 266-448 |
| Cow position: | chr18:10322785-10322969 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 134 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 98, 128 |
| Conread position: | 266-452 |
| Cow position: | chr18:50359311-50359502 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 145 |
| Alignm E-value: | 7e-31 |
| Alignm gaps (pig, cow): | 104, 138 |
| Conread position: | 266-457 |
| Cow position: | chr18:11856880-11857078 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 154 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 101, 135 |
| Conread position: | 266-457 |
| Cow position: | chr18:20641517-20641319 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 150 |
| Alignm E-value: | 7e-31 |
| Alignm gaps (pig, cow): | 104, 140 |
| Conread position: | 266-459 |
| Cow position: | chr18:25281913-25281728 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 142 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 34, 98 |
| Conread position: | 266-460 |
| Cow position: | chr18:47525387-47525578 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 139 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 176, 102 |
| Conread position: | 266-461 |
| Cow position: | chr18:18592452-18592648 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 151 |
| Alignm E-value: | 9e-34 |
| Alignm gaps (pig, cow): | 97, 138 |
| Conread position: | 266-472 |
| Cow position: | chr18:51395906-51395697 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 153 |
| Alignm E-value: | 7e-31 |
| Alignm gaps (pig, cow): | 104, 136 |
| Conread position: | 267-442 |
| Cow position: | chr18:30786720-30786896 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 132 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 24, 132 |
| Conread position: | 267-442 |
| Cow position: | chr18:38985679-38985857 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 133 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 100, 131 |
| Conread position: | 267-444 |
| Cow position: | chr18:42427600-42427784 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 139 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 84, 79 |
| Conread position: | 267-446 |
| Cow position: | chr18:14586490-14586308 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 132 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 93, 128 |
| Conread position: | 267-448 |
| Cow position: | chr18:51643385-51643197 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 142 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 84, 76 |
| Conread position: | 267-453 |
| Cow position: | chr18:5632248-5632442 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 141 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 100, 141 |
| Conread position: | 267-457 |
| Cow position: | chr18:4152574-4152372 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 143 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 73, 0 |
| Conread position: | 267-459 |
| Cow position: | chr18:10576090-10576286 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 147 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 5, 132 |
| Conread position: | 268-447 |
| Cow position: | chr18:47868588-47868767 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 132 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 5, 31 |
| Conread position: | 268-449 |
| Cow position: | chr18:5072429-5072244 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 135 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 99, 131 |
| Conread position: | 268-472 |
| Cow position: | chr18:1571257-1571041 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 163 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 7, 143 |
| Conread position: | 270-442 |
| Cow position: | chr18:35582055-35581887 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 128 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 92, 0 |
| Conread position: | 270-466 |
| Cow position: | chr18:33492343-33492538 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 143 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 92, 132 |
| Conread position: | 271-464 |
| Cow position: | chr18:12273642-12273838 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 150 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 81, 77 |
| Conread position: | 274-436 |
| Cow position: | chr18:47125413-47125252 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 121 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 92, 120 |
| Conread position: | 274-457 |
| Cow position: | chr18:28297877-28297701 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 133 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 165, 97 |
| Conread position: | 274-459 |
| Cow position: | chr18:50632455-50632262 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 151 |
| Alignm E-value: | 8e-32 |
| Alignm gaps (pig, cow): | 90, 83 |
| Conread position: | 274-460 |
| Cow position: | chr18:31672525-31672334 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 145 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 77, 32 |
| Conread position: | 276-456 |
| Cow position: | chr18:7963418-7963595 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 135 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 94, 41 |
| Conread position: | 281-439 |
| Cow position: | chr18:21143970-21143805 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 128 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 281-457 |
| Cow position: | chr18:26938977-26939154 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 133 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 98, 82 |
| Conread position: | 282-448 |
| Cow position: | chr18:9596178-9596350 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 135 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 82, 118 |
| Conread position: | 282-468 |
| Cow position: | chr18:32290707-32290897 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 143 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 79, 119 |
| Conread position: | 283-423 |
| Cow position: | chr18:5462692-5462558 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 110 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 81, 60 |
| Conread position: | 283-447 |
| Cow position: | chr18:24719309-24719482 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 134 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 87, 118 |
| Conread position: | 283-455 |
| Cow position: | chr18:9846414-9846240 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 129 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 83, 119 |
| Conread position: | 283-462 |
| Cow position: | chr18:12584843-12584656 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 133 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 87, 0 |
| Conread position: | 284-457 |
| Cow position: | chr18:18568990-18569157 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 129 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 75, 0 |
| Conread position: | 284-458 |
| Cow position: | chr18:30586228-30586055 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 136 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 86, 109 |
| Conread position: | 284-464 |
| Cow position: | chr18:38523657-38523841 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 133 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 66, 59 |
| Conread position: | 284-469 |
| Cow position: | chr18:44027193-44027368 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 134 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 285-453 |
| Cow position: | chr18:19849759-19849593 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 129 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 155, 78 |
| Conread position: | 286-462 |
| Cow position: | chr18:44206085-44205906 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 141 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 82, 115 |
| Conread position: | 287-434 |
| Cow position: | chr18:38228407-38228558 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 116 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 70, 115 |
| Conread position: | 287-444 |
| Cow position: | chr18:47096429-47096590 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 129 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 81, 116 |
| Conread position: | 288-452 |
| Cow position: | chr18:36501077-36500905 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 131 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 69, 119 |
| Conread position: | 290-458 |
| Cow position: | chr18:49017498-49017663 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 133 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 73, 34 |
| Conread position: | 290-468 |
| Cow position: | chr18:247692-247505 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 138 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 77, 114 |
| Conread position: | 291-460 |
| Cow position: | chr18:36098370-36098543 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 130 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 76, 112 |
| Conread position: | 291-462 |
| Cow position: | chr18:21051079-21050902 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 133 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 77, 111 |
| Conread position: | 292-450 |
| Cow position: | chr18:12056675-12056521 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 121 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 292-464 |
| Cow position: | chr18:9089704-9089881 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 132 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 97, 0 |
| Conread position: | 292-468 |
| Cow position: | chr18:50263918-50263737 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 135 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 71, 107 |
| Conread position: | 296-460 |
| Cow position: | chr18:4485608-4485779 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 135 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 69, 105 |
| Conread position: | 299-459 |
| Cow position: | chr18:29091750-29091911 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 124 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 72, 49 |
| Conread position: | 303-442 |
| Cow position: | chr18:47824757-47824608 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 119 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 60, 101 |
| Conread position: | 305-452 |
| Cow position: | chr18:28189703-28189558 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 112 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 88, 0 |
| Conread position: | 314-466 |
| Cow position: | chr18:37804666-37804820 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 114 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 73, 63 |
Show alignments to all cow chromosomes.