Cow genome map

Conread name: rcki31_e15.y1

Conread position: 234-455
Cow position: chr24:42226225-42226451 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 165
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 20, 71

Conread position: 240-440
Cow position: chr24:39483442-39483636 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 146
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 13, 0

Conread position: 241-442
Cow position: chr24:35675504-35675706 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 152
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 91, 12

Conread position: 241-457
Cow position: chr24:18442596-18442383 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 156
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 29, 12

Conread position: 241-467
Cow position: chr24:1269751-1269978 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 169
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 125, 13

Conread position: 244-442
Cow position: chr24:18474762-18474554 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 145
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 126, 21

Conread position: 247-366
Cow position: chr24:39791511-39791628 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 94
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 19, 0

Conread position: 247-374
Cow position: chr24:17375608-17375735 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 101
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 117, 19

Conread position: 247-428
Cow position: chr24:31816547-31816736 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 150
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 5, 20

Conread position: 247-431
Cow position: chr24:29561603-29561415 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 147
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 120, 19

Conread position: 247-432
Cow position: chr24:25122314-25122502 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 152
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 95, 19

Conread position: 247-437
Cow position: chr24:29539959-29539760 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 155
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 116, 19

Conread position: 247-438
Cow position: chr24:27713435-27713239 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 148
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 110, 19

Conread position: 247-440
Cow position: chr24:5360689-5360884 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 153
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 119, 19

Conread position: 247-444
Cow position: chr24:211957-212147 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 141
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 19, 0

Conread position: 247-445
Cow position: chr24:33372525-33372724 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 153
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 123, 20

Conread position: 247-447
Cow position: chr24:21834989-21834783 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 154
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 109, 19

Conread position: 247-448
Cow position: chr24:39238741-39238942 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 145
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 119, 19

Conread position: 247-450
Cow position: chr24:24227710-24227508 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 161
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 76, 19

Conread position: 247-452
Cow position: chr24:2402398-2402194 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 147
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 108, 19

Conread position: 247-455
Cow position: chr24:27608128-27607923 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 149
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 72, 19

Conread position: 247-459
Cow position: chr24:28510767-28510982 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 161
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 119, 19

Conread position: 247-459
Cow position: chr24:37823497-37823716 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 158
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 114, 19

Conread position: 247-462
Cow position: chr24:23694936-23694715 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 166
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 26, 19

Conread position: 247-464
Cow position: chr24:37037870-37038087 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 165
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 66, 19

Conread position: 247-466
Cow position: chr24:24491047-24490826 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 175
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 119, 19

Conread position: 247-469
Cow position: chr24:31812159-31812388 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 163
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 117, 19

Conread position: 247-470
Cow position: chr24:28990531-28990765 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 167
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 103, 19

Conread position: 247-472
Cow position: chr24:30314056-30313815 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 175
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 111, 19

Conread position: 248-444
Cow position: chr24:33244366-33244563 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 150
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 115, 18

Conread position: 248-447
Cow position: chr24:175521-175328 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 150
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 128, 18

Conread position: 248-448
Cow position: chr24:20807506-20807705 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 144
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 122, 20

Conread position: 248-470
Cow position: chr24:5141913-5142141 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 172
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 115, 17

Conread position: 257-442
Cow position: chr24:20364430-20364241 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 149
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 109, 9

Conread position: 259-373
Cow position: chr24:36775795-36775684 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 92
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 7, 0

Conread position: 259-441
Cow position: chr24:15246661-15246484 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 138
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 105, 8

Conread position: 259-441
Cow position: chr24:39849904-39849718 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 141
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 107, 8

Conread position: 260-366
Cow position: chr24:28042958-28043063 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 90
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 6, 0

Conread position: 262-444
Cow position: chr24:35030077-35029896 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 129
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 136, 0

Conread position: 263-359
Cow position: chr24:18968833-18968929 (view UCSC Genome Browser custom track)
Alignm length: 97
Alignm identity: 81
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 263-366
Cow position: chr24:28319224-28319121 (view UCSC Genome Browser custom track)
Alignm length: 104
Alignm identity: 85
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 263-373
Cow position: chr24:27349189-27349082 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 90
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 23, 0

Conread position: 263-430
Cow position: chr24:28344370-28344543 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 129
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 61, 125

Conread position: 263-430
Cow position: chr24:31479565-31479396 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 129
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 11, 132

Conread position: 263-440
Cow position: chr24:13353024-13353199 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 137
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 135, 0

Conread position: 263-440
Cow position: chr24:13610296-13610474 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 137
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 82, 31

Conread position: 263-440
Cow position: chr24:24755432-24755602 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 126
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 132, 0

Conread position: 263-442
Cow position: chr24:37974996-37974808 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 141
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 104, 140

Conread position: 263-450
Cow position: chr24:27844543-27844350 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 146
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 124, 0

Conread position: 263-456
Cow position: chr24:22133156-22133355 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 148
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 103, 150

Conread position: 263-457
Cow position: chr24:42687833-42688031 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 146
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 99, 30

Conread position: 263-458
Cow position: chr24:15057384-15057578 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 145
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 104, 30

Conread position: 263-459
Cow position: chr24:3412668-3412873 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 150
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 107, 94

Conread position: 263-463
Cow position: chr24:6131884-6131690 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 154
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 96, 34

Conread position: 263-471
Cow position: chr24:30897551-30897355 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 158
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 181, 76

Conread position: 266-442
Cow position: chr24:34742741-34742924 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 130
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 110, 0

Conread position: 266-446
Cow position: chr24:27940633-27940449 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 138
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 75, 37

Conread position: 266-453
Cow position: chr24:7757760-7757955 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 142
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 101, 140

Conread position: 266-460
Cow position: chr24:29984996-29984797 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 149
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 97, 137

Conread position: 266-466
Cow position: chr24:39523461-39523251 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 150
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 101, 139

Conread position: 267-442
Cow position: chr24:34396190-34396015 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 128
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 97, 121

Conread position: 267-465
Cow position: chr24:6156840-6157031 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 143
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 175, 11

Conread position: 268-448
Cow position: chr24:13114746-13114923 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 133
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 104, 29

Conread position: 269-458
Cow position: chr24:230274-230471 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 146
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 87, 134

Conread position: 269-471
Cow position: chr24:28303374-28303159 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 162
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 39, 189

Conread position: 270-442
Cow position: chr24:29389223-29389392 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 126
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 53, 101

Conread position: 270-455
Cow position: chr24:32891052-32890858 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 140
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 97, 133

Conread position: 270-458
Cow position: chr24:25971082-25970893 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 140
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 97, 35

Conread position: 272-471
Cow position: chr24:6723759-6723956 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 146
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 7, 79

Conread position: 274-436
Cow position: chr24:43832524-43832691 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 130
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 79, 119

Conread position: 275-472
Cow position: chr24:40811676-40811874 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 153
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 92, 20

Conread position: 276-442
Cow position: chr24:22855583-22855753 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 129
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 91, 0

Conread position: 281-444
Cow position: chr24:15288830-15289006 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 132
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 86, 125

Conread position: 282-373
Cow position: chr24:42815535-42815626 (view UCSC Genome Browser custom track)
Alignm length: 92
Alignm identity: 78
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 283-442
Cow position: chr24:16509982-16510146 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 127
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 84, 123

Conread position: 283-450
Cow position: chr24:3493889-3494065 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 130
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 84, 125

Conread position: 283-456
Cow position: chr24:19186942-19187122 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 138
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 84, 123

Conread position: 283-459
Cow position: chr24:14550799-14550983 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 133
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 84, 0

Conread position: 283-459
Cow position: chr24:27810162-27810339 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 134
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 87, 117

Conread position: 283-467
Cow position: chr24:6677651-6677835 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 138
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 65, 112

Conread position: 284-366
Cow position: chr24:11007462-11007544 (view UCSC Genome Browser custom track)
Alignm length: 83
Alignm identity: 73
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 284-430
Cow position: chr24:38841416-38841270 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 114
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 92, 116

Conread position: 284-438
Cow position: chr24:23000019-23000172 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 120
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 69, 105

Conread position: 284-442
Cow position: chr24:28256053-28255888 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 130
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 85, 116

Conread position: 285-457
Cow position: chr24:2730609-2730438 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 128
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 79, 115

Conread position: 287-443
Cow position: chr24:41934955-41935104 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 123
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 58, 0

Conread position: 290-442
Cow position: chr24:41423615-41423770 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 119
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 76, 109

Conread position: 298-471
Cow position: chr24:6488228-6488407 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 139
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 72, 105

Conread position: 301-455
Cow position: chr24:27206196-27206048 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 120
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 75, 33

Conread position: 305-444
Cow position: chr24:17938719-17938858 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 109
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 59, 90

Conread position: 310-439
Cow position: chr24:2223180-2223049 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 104
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 56, 88

Show alignments to all cow chromosomes.