Cow genome map

Conread name: rcki31_e15.y1

Conread position: 241-366
Cow position: chr26:33241895-33242018 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 97
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 13, 0

Conread position: 243-466
Cow position: chr26:33038217-33037986 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 173
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 123, 160

Conread position: 243-469
Cow position: chr26:18825276-18825040 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 163
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 127, 24

Conread position: 247-364
Cow position: chr26:14175293-14175409 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 94
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 19, 0

Conread position: 247-369
Cow position: chr26:12940411-12940532 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 98
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 19, 0

Conread position: 247-438
Cow position: chr26:14481543-14481355 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 139
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 19, 0

Conread position: 247-441
Cow position: chr26:31888744-31888944 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 149
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 118, 27

Conread position: 247-448
Cow position: chr26:7687234-7687021 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 151
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 115, 18

Conread position: 247-448
Cow position: chr26:12145107-12144894 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 155
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 126, 19

Conread position: 247-450
Cow position: chr26:21637026-21636827 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 156
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 192, 19

Conread position: 247-453
Cow position: chr26:19591494-19591704 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 155
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 119, 19

Conread position: 247-453
Cow position: chr26:28251164-28251382 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 159
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 30, 0

Conread position: 247-462
Cow position: chr26:5666059-5666276 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 163
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 83, 18

Conread position: 247-471
Cow position: chr26:5836809-5836573 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 171
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 116, 18

Conread position: 258-438
Cow position: chr26:10700881-10700692 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 143
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 105, 14

Conread position: 259-448
Cow position: chr26:9491948-9492141 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 149
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 103, 7

Conread position: 262-441
Cow position: chr26:798272-798093 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 131
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 48, 5

Conread position: 263-403
Cow position: chr26:33392420-33392559 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 104
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 120, 0

Conread position: 263-430
Cow position: chr26:35704414-35704577 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 128
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 107, 76

Conread position: 263-436
Cow position: chr26:32897843-32897670 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 132
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 66, 76

Conread position: 263-438
Cow position: chr26:16585461-16585639 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 137
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 102, 138

Conread position: 263-441
Cow position: chr26:15211829-15212006 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 133
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 103, 136

Conread position: 263-443
Cow position: chr26:22892419-22892231 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 140
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 103, 140

Conread position: 263-446
Cow position: chr26:6514869-6515052 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 138
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 100, 137

Conread position: 263-446
Cow position: chr26:19636318-19636509 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 139
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 47, 159

Conread position: 263-446
Cow position: chr26:20291666-20291473 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 150
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 107, 142

Conread position: 263-453
Cow position: chr26:13863008-13862812 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 146
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 103, 31

Conread position: 263-456
Cow position: chr26:8341522-8341712 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 148
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 103, 61

Conread position: 263-458
Cow position: chr26:33466412-33466217 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 140
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 55, 135

Conread position: 263-462
Cow position: chr26:20769877-20770086 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 157
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 104, 140

Conread position: 263-463
Cow position: chr26:32955607-32955409 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 149
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 25, 87

Conread position: 263-464
Cow position: chr26:24240706-24240906 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 148
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 140, 26

Conread position: 263-466
Cow position: chr26:34611155-34610947 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 155
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 100, 140

Conread position: 265-438
Cow position: chr26:14905780-14905605 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 130
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 99, 138

Conread position: 266-447
Cow position: chr26:20126017-20126188 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 148
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 91, 0

Conread position: 266-448
Cow position: chr26:9099503-9099311 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 142
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 98, 136

Conread position: 266-451
Cow position: chr26:25526278-25526471 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 135
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 108, 0

Conread position: 266-453
Cow position: chr26:28446612-28446795 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 133
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 108, 0

Conread position: 266-469
Cow position: chr26:13018360-13018158 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 152
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 173, 98

Conread position: 267-463
Cow position: chr26:19459723-19459933 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 156
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 90, 157

Conread position: 268-442
Cow position: chr26:9604593-9604771 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 128
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 99, 132

Conread position: 269-444
Cow position: chr26:33112354-33112169 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 137
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 72, 135

Conread position: 270-442
Cow position: chr26:25407427-25407597 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 136
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 99, 51

Conread position: 270-443
Cow position: chr26:9535551-9535730 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 138
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 96, 54

Conread position: 274-430
Cow position: chr26:22176679-22176835 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 121
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 91, 121

Conread position: 276-451
Cow position: chr26:32517418-32517243 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 137
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 90, 122

Conread position: 281-453
Cow position: chr26:32503300-32503117 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 135
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 9, 121

Conread position: 281-469
Cow position: chr26:5233018-5233209 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 136
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 86, 123

Conread position: 283-435
Cow position: chr26:17057724-17057883 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 122
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 18, 124

Conread position: 283-448
Cow position: chr26:7224296-7224131 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 130
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 21, 66

Conread position: 283-460
Cow position: chr26:21319992-21320180 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 136
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 84, 0

Conread position: 284-437
Cow position: chr26:20551191-20551340 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 117
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 92, 0

Conread position: 286-452
Cow position: chr26:26504784-26504955 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 127
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 40, 118

Conread position: 286-465
Cow position: chr26:21243144-21243326 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 142
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 81, 114

Conread position: 287-453
Cow position: chr26:12891918-12891745 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 131
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 79, 15

Conread position: 288-443
Cow position: chr26:31973466-31973620 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 114
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 76, 106

Conread position: 290-472
Cow position: chr26:14032380-14032204 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 136
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 73, 0

Conread position: 292-462
Cow position: chr26:16796155-16795977 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 135
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 73, 116

Conread position: 311-442
Cow position: chr26:17465031-17464900 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 103
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 66, 83

Conread position: 311-461
Cow position: chr26:6485943-6485795 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 116
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 106, 22

Conread position: 352-472
Cow position: chr26:18651774-18651890 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 95
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 40, 0

Show alignments to all cow chromosomes.