Cow genome map

Conread name: rcki31_e15.y1

Conread position: 241-466
Cow position: chr27:31169143-31169373 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 160
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 126, 13

Conread position: 243-460
Cow position: chr27:22386839-22386627 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 156
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 11, 0

Conread position: 246-442
Cow position: chr27:13204422-13204222 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 155
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 117, 20

Conread position: 246-462
Cow position: chr27:20888682-20888473 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 159
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 7, 0

Conread position: 247-361
Cow position: chr27:1122993-1122881 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 91
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 18, 0

Conread position: 247-366
Cow position: chr27:30489448-30489566 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 96
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 19, 0

Conread position: 247-373
Cow position: chr27:26407200-26407322 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 98
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 18, 0

Conread position: 247-429
Cow position: chr27:6319881-6319693 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 142
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 116, 19

Conread position: 247-442
Cow position: chr27:19508975-19508769 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 155
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 123, 19

Conread position: 247-443
Cow position: chr27:24693375-24693174 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 146
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 120, 19

Conread position: 247-445
Cow position: chr27:23452423-23452217 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 157
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 119, 19

Conread position: 247-446
Cow position: chr27:26853398-26853598 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 142
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 130, 21

Conread position: 247-448
Cow position: chr27:28478542-28478333 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 153
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 123, 19

Conread position: 247-453
Cow position: chr27:30890253-30890047 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 149
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 109, 19

Conread position: 247-456
Cow position: chr27:7343466-7343685 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 161
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 80, 19

Conread position: 247-457
Cow position: chr27:19387980-19387764 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 164
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 115, 19

Conread position: 247-460
Cow position: chr27:26984309-26984094 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 153
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 105, 18

Conread position: 247-467
Cow position: chr27:23560069-23560295 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 172
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 116, 19

Conread position: 247-472
Cow position: chr27:16284437-16284213 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 170
Alignm E-value: 9e-39
Alignm gaps (pig, cow): 192, 19

Conread position: 248-432
Cow position: chr27:4858678-4858852 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 137
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 119, 18

Conread position: 248-441
Cow position: chr27:20770567-20770758 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 142
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 117, 18

Conread position: 248-471
Cow position: chr27:426930-426698 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 176
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 119, 18

Conread position: 253-373
Cow position: chr27:11466509-11466628 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 97
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 117, 13

Conread position: 259-470
Cow position: chr27:24358284-24358069 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 156
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 111, 65

Conread position: 262-465
Cow position: chr27:4398543-4398751 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 150
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 101, 122

Conread position: 262-469
Cow position: chr27:16047550-16047756 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 158
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 78, 136

Conread position: 263-428
Cow position: chr27:21669170-21669341 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 131
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 95, 139

Conread position: 263-430
Cow position: chr27:435181-435001 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 136
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 58, 145

Conread position: 263-438
Cow position: chr27:26643632-26643464 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 131
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 107, 31

Conread position: 263-444
Cow position: chr27:27055233-27055051 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 144
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 103, 31

Conread position: 263-446
Cow position: chr27:22547452-22547635 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 141
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 103, 28

Conread position: 263-448
Cow position: chr27:20092887-20093062 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 138
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 105, 0

Conread position: 263-451
Cow position: chr27:8353423-8353243 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 148
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 158, 30

Conread position: 263-452
Cow position: chr27:16871996-16872185 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 142
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 44, 105

Conread position: 263-453
Cow position: chr27:15409089-15409277 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 148
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 105, 132

Conread position: 263-457
Cow position: chr27:23485156-23484958 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 149
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 103, 31

Conread position: 263-461
Cow position: chr27:2949380-2949577 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 157
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 103, 47

Conread position: 263-462
Cow position: chr27:6162463-6162665 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 152
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 97, 141

Conread position: 263-464
Cow position: chr27:29504702-29504895 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 144
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 94, 0

Conread position: 263-465
Cow position: chr27:22035430-22035636 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 159
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 77, 85

Conread position: 263-469
Cow position: chr27:19741461-19741662 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 161
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 185, 100

Conread position: 263-472
Cow position: chr27:17397507-17397724 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 165
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 104, 138

Conread position: 264-430
Cow position: chr27:21025632-21025466 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 128
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 91, 135

Conread position: 264-453
Cow position: chr27:31557023-31556840 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 138
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 66, 85

Conread position: 264-471
Cow position: chr27:27528874-27529085 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 149
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 76, 185

Conread position: 265-431
Cow position: chr27:22792777-22792607 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 127
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 95, 139

Conread position: 266-415
Cow position: chr27:17646224-17646373 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 111
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 87, 134

Conread position: 266-442
Cow position: chr27:22245570-22245399 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 133
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 91, 47

Conread position: 266-444
Cow position: chr27:1636991-1637171 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 135
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 86, 82

Conread position: 266-449
Cow position: chr27:20048578-20048385 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 140
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 101, 142

Conread position: 266-454
Cow position: chr27:19576379-19576578 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 155
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 94, 137

Conread position: 266-456
Cow position: chr27:15332351-15332541 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 142
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 42, 138

Conread position: 266-460
Cow position: chr27:18435189-18435392 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 149
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 104, 130

Conread position: 266-460
Cow position: chr27:27632657-27632854 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 144
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 101, 46

Conread position: 266-472
Cow position: chr27:17102840-17102625 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 156
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 109, 62

Conread position: 267-432
Cow position: chr27:16705194-16705020 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 137
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 103, 137

Conread position: 267-439
Cow position: chr27:1067511-1067336 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 135
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 96, 137

Conread position: 267-457
Cow position: chr27:20812848-20812666 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 138
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 97, 119

Conread position: 267-466
Cow position: chr27:4944571-4944773 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 152
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 93, 129

Conread position: 267-468
Cow position: chr27:26400778-26400988 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 154
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 103, 135

Conread position: 267-471
Cow position: chr27:15865550-15865337 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 148
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 100, 136

Conread position: 267-472
Cow position: chr27:23918097-23918307 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 148
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 83, 136

Conread position: 268-458
Cow position: chr27:18491498-18491307 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 140
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 128, 89

Conread position: 270-472
Cow position: chr27:10394892-10394697 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 142
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 63, 0

Conread position: 271-439
Cow position: chr27:299442-299614 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 127
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 105, 19

Conread position: 274-446
Cow position: chr27:20325287-20325111 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 136
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 90, 79

Conread position: 274-469
Cow position: chr27:6151234-6151045 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 149
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 22, 0

Conread position: 275-467
Cow position: chr27:20828775-20828971 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 138
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 87, 73

Conread position: 281-430
Cow position: chr27:31031384-31031236 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 115
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 85, 116

Conread position: 281-460
Cow position: chr27:5781017-5780843 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 130
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 115, 0

Conread position: 283-430
Cow position: chr27:641118-641268 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 114
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 79, 115

Conread position: 283-440
Cow position: chr27:20283563-20283403 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 122
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 63, 118

Conread position: 283-460
Cow position: chr27:15867317-15867129 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 141
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 68, 58

Conread position: 283-462
Cow position: chr27:14343521-14343698 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 138
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 22, 111

Conread position: 283-463
Cow position: chr27:15315446-15315259 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 138
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 84, 118

Conread position: 283-472
Cow position: chr27:29431396-29431203 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 135
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 87, 116

Conread position: 284-442
Cow position: chr27:20749084-20749245 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 122
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 83, 112

Conread position: 284-445
Cow position: chr27:28476187-28476354 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 127
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 82, 117

Conread position: 284-457
Cow position: chr27:16246728-16246549 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 132
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 80, 117

Conread position: 284-467
Cow position: chr27:23929893-23929708 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 135
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 92, 37

Conread position: 284-470
Cow position: chr27:22748254-22748057 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 142
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 83, 125

Conread position: 286-444
Cow position: chr27:178787-178618 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 131
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 80, 118

Conread position: 289-461
Cow position: chr27:21419269-21419446 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 137
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 63, 57

Conread position: 289-472
Cow position: chr27:4195468-4195278 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 136
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 70, 28

Conread position: 290-442
Cow position: chr27:22225672-22225812 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 117
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 56, 0

Conread position: 294-452
Cow position: chr27:20561497-20561334 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 125
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 74, 8

Conread position: 298-470
Cow position: chr27:16478424-16478593 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 125
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 93, 0

Conread position: 301-453
Cow position: chr27:21447920-21448076 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 119
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 60, 98

Show alignments to all cow chromosomes.