Cow genome map
| Conread name: | rcki31_e15.y1 |
| Conread position: | 227-367 |
| Cow position: | chr4:43916254-43916394 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 107 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 23, 42 |
| Conread position: | 239-426 |
| Cow position: | chr4:44449527-44449349 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 141 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 241-453 |
| Cow position: | chr4:18099080-18098859 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 162 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 122, 13 |
| Conread position: | 242-361 |
| Cow position: | chr4:7808553-7808671 (view UCSC Genome Browser custom track) |
| Alignm length: | 120 |
| Alignm identity: | 94 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 246-442 |
| Cow position: | chr4:65173089-65173293 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 157 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 113, 7 |
| Conread position: | 246-458 |
| Cow position: | chr4:23600154-23600361 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 156 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 137, 7 |
| Conread position: | 246-458 |
| Cow position: | chr4:38209989-38209768 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 162 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 120, 20 |
| Conread position: | 246-460 |
| Cow position: | chr4:19119004-19119228 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 161 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 117, 8 |
| Conread position: | 246-466 |
| Cow position: | chr4:4295573-4295790 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 157 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 118, 7 |
| Conread position: | 246-472 |
| Cow position: | chr4:3283461-3283232 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 171 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 128, 21 |
| Conread position: | 247-366 |
| Cow position: | chr4:46435311-46435429 (view UCSC Genome Browser custom track) |
| Alignm length: | 120 |
| Alignm identity: | 93 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 247-382 |
| Cow position: | chr4:60506263-60506392 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 104 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 247-436 |
| Cow position: | chr4:53208280-53208468 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 146 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 120, 21 |
| Conread position: | 247-438 |
| Cow position: | chr4:3421609-3421811 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 150 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 116, 18 |
| Conread position: | 247-440 |
| Cow position: | chr4:41907595-41907393 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 152 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 119, 19 |
| Conread position: | 247-442 |
| Cow position: | chr4:5727831-5728022 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 147 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 63, 19 |
| Conread position: | 247-442 |
| Cow position: | chr4:13693684-13693483 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 149 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 108, 6 |
| Conread position: | 247-442 |
| Cow position: | chr4:19435242-19435440 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 141 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 140, 21 |
| Conread position: | 247-443 |
| Cow position: | chr4:21506969-21506772 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 152 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 119, 19 |
| Conread position: | 247-444 |
| Cow position: | chr4:4319165-4318961 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 147 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 94, 19 |
| Conread position: | 247-446 |
| Cow position: | chr4:59002152-59001943 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 161 |
| Alignm E-value: | 9e-32 |
| Alignm gaps (pig, cow): | 123, 19 |
| Conread position: | 247-447 |
| Cow position: | chr4:19597337-19597136 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 150 |
| Alignm E-value: | 8e-31 |
| Alignm gaps (pig, cow): | 123, 19 |
| Conread position: | 247-447 |
| Cow position: | chr4:25356331-25356134 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 154 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 95, 19 |
| Conread position: | 247-448 |
| Cow position: | chr4:19333373-19333580 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 152 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 123, 19 |
| Conread position: | 247-448 |
| Cow position: | chr4:28839608-28839811 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 152 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 115, 18 |
| Conread position: | 247-448 |
| Cow position: | chr4:51728064-51728271 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 164 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 26, 19 |
| Conread position: | 247-452 |
| Cow position: | chr4:28701346-28701546 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 157 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 123, 19 |
| Conread position: | 247-453 |
| Cow position: | chr4:17851266-17851058 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 155 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 119, 19 |
| Conread position: | 247-459 |
| Cow position: | chr4:23847062-23846846 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 162 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 142, 19 |
| Conread position: | 247-459 |
| Cow position: | chr4:35981983-35982205 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 160 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 49, 21 |
| Conread position: | 247-460 |
| Cow position: | chr4:20027116-20026894 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 167 |
| Alignm E-value: | 9e-32 |
| Alignm gaps (pig, cow): | 115, 19 |
| Conread position: | 247-462 |
| Cow position: | chr4:17774363-17774153 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 165 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 121, 18 |
| Conread position: | 247-463 |
| Cow position: | chr4:61897548-61897339 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 159 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 201, 19 |
| Conread position: | 247-466 |
| Cow position: | chr4:42423818-42423592 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 163 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 119, 21 |
| Conread position: | 247-472 |
| Cow position: | chr4:54455355-54455128 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 164 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 109, 19 |
| Conread position: | 248-373 |
| Cow position: | chr4:54541650-54541526 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 97 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 248-423 |
| Cow position: | chr4:48422865-48423040 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 125 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 128, 17 |
| Conread position: | 248-461 |
| Cow position: | chr4:85682-85904 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 157 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 93, 18 |
| Conread position: | 250-444 |
| Cow position: | chr4:24810459-24810258 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 150 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 96, 17 |
| Conread position: | 253-460 |
| Cow position: | chr4:44184123-44183910 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 145 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 110, 0 |
| Conread position: | 255-460 |
| Cow position: | chr4:37991587-37991797 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 157 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 109, 11 |
| Conread position: | 256-438 |
| Cow position: | chr4:32601833-32602013 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 147 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 110, 10 |
| Conread position: | 256-457 |
| Cow position: | chr4:19558679-19558872 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 152 |
| Alignm E-value: | 9e-32 |
| Alignm gaps (pig, cow): | 33, 115 |
| Conread position: | 258-452 |
| Cow position: | chr4:61887634-61887844 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 156 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 113, 8 |
| Conread position: | 259-366 |
| Cow position: | chr4:19122870-19122977 (view UCSC Genome Browser custom track) |
| Alignm length: | 108 |
| Alignm identity: | 86 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 261-444 |
| Cow position: | chr4:51083338-51083147 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 156 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 107, 96 |
| Conread position: | 261-451 |
| Cow position: | chr4:54785927-54785730 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 145 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 115, 14 |
| Conread position: | 261-457 |
| Cow position: | chr4:39010049-39010260 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 157 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 98, 149 |
| Conread position: | 261-467 |
| Cow position: | chr4:13026304-13026509 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 145 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 103, 85 |
| Conread position: | 262-441 |
| Cow position: | chr4:961649-961475 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 134 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 5, 0 |
| Conread position: | 262-471 |
| Cow position: | chr4:44854290-44854067 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 156 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 105, 0 |
| Conread position: | 263-365 |
| Cow position: | chr4:54650483-54650380 (view UCSC Genome Browser custom track) |
| Alignm length: | 104 |
| Alignm identity: | 87 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 263-393 |
| Cow position: | chr4:68889559-68889427 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 102 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 101, 0 |
| Conread position: | 263-432 |
| Cow position: | chr4:34653867-34653694 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 131 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 91, 85 |
| Conread position: | 263-438 |
| Cow position: | chr4:19102880-19102689 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 140 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 107, 0 |
| Conread position: | 263-438 |
| Cow position: | chr4:29842828-29843006 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 129 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 103, 136 |
| Conread position: | 263-440 |
| Cow position: | chr4:17186348-17186159 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 149 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 105, 21 |
| Conread position: | 263-440 |
| Cow position: | chr4:37915333-37915149 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 144 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 107, 9 |
| Conread position: | 263-442 |
| Cow position: | chr4:21065038-21065216 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 139 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 79, 86 |
| Conread position: | 263-442 |
| Cow position: | chr4:26659301-26659491 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 140 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 57, 143 |
| Conread position: | 263-442 |
| Cow position: | chr4:34022583-34022395 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 139 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 94, 0 |
| Conread position: | 263-442 |
| Cow position: | chr4:61391225-61391044 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 143 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 97, 138 |
| Conread position: | 263-443 |
| Cow position: | chr4:53134598-53134789 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 144 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 63, 136 |
| Conread position: | 263-446 |
| Cow position: | chr4:34509842-34510024 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 137 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 101, 132 |
| Conread position: | 263-447 |
| Cow position: | chr4:32790001-32789820 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 141 |
| Alignm E-value: | 8e-31 |
| Alignm gaps (pig, cow): | 107, 46 |
| Conread position: | 263-447 |
| Cow position: | chr4:38944254-38944062 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 143 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 103, 17 |
| Conread position: | 263-448 |
| Cow position: | chr4:12049249-12049421 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 139 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 263-451 |
| Cow position: | chr4:60719103-60719292 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 143 |
| Alignm E-value: | 9e-32 |
| Alignm gaps (pig, cow): | 122, 149 |
| Conread position: | 263-452 |
| Cow position: | chr4:13344540-13344737 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 145 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 104, 140 |
| Conread position: | 263-452 |
| Cow position: | chr4:20327708-20327520 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 148 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 39, 106 |
| Conread position: | 263-453 |
| Cow position: | chr4:4084448-4084254 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 143 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 106, 136 |
| Conread position: | 263-460 |
| Cow position: | chr4:63472073-63471883 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 137 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 105, 0 |
| Conread position: | 263-464 |
| Cow position: | chr4:28772065-28771857 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 152 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 107, 170 |
| Conread position: | 263-465 |
| Cow position: | chr4:36290626-36290837 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 150 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 107, 142 |
| Conread position: | 263-472 |
| Cow position: | chr4:33838798-33838580 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 157 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 100, 31 |
| Conread position: | 264-373 |
| Cow position: | chr4:12441898-12442006 (view UCSC Genome Browser custom track) |
| Alignm length: | 110 |
| Alignm identity: | 88 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 61, 0 |
| Conread position: | 264-453 |
| Cow position: | chr4:59277476-59277268 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 156 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 98, 34 |
| Conread position: | 265-460 |
| Cow position: | chr4:54501019-54500836 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 150 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 266-366 |
| Cow position: | chr4:19098477-19098577 (view UCSC Genome Browser custom track) |
| Alignm length: | 101 |
| Alignm identity: | 83 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 266-451 |
| Cow position: | chr4:50687856-50687664 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 138 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 56, 135 |
| Conread position: | 266-453 |
| Cow position: | chr4:12591209-12591018 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 139 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 121, 102 |
| Conread position: | 266-456 |
| Cow position: | chr4:62472084-62472281 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 139 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 100, 0 |
| Conread position: | 266-458 |
| Cow position: | chr4:30769040-30769239 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 150 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 85, 51 |
| Conread position: | 266-458 |
| Cow position: | chr4:60527185-60527388 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 148 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 99, 143 |
| Conread position: | 266-461 |
| Cow position: | chr4:19349485-19349679 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 140 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 44, 70 |
| Conread position: | 266-462 |
| Cow position: | chr4:40414623-40414417 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 150 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 96, 139 |
| Conread position: | 266-465 |
| Cow position: | chr4:37935280-37935086 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 145 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 99, 110 |
| Conread position: | 266-468 |
| Cow position: | chr4:23807954-23808162 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 146 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 106, 170 |
| Conread position: | 266-472 |
| Cow position: | chr4:8083791-8083587 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 156 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 110, 14 |
| Conread position: | 267-442 |
| Cow position: | chr4:30691010-30691193 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 137 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 102, 29 |
| Conread position: | 267-443 |
| Cow position: | chr4:20184710-20184875 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 131 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 267-443 |
| Cow position: | chr4:27530124-27530304 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 134 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 129, 109 |
| Conread position: | 267-443 |
| Cow position: | chr4:38157082-38156901 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 137 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 103, 133 |
| Conread position: | 267-464 |
| Cow position: | chr4:31177830-31178035 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 144 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 101, 135 |
| Conread position: | 267-470 |
| Cow position: | chr4:59785328-59785538 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 150 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 101, 136 |
| Conread position: | 267-471 |
| Cow position: | chr4:39007513-39007717 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 161 |
| Alignm E-value: | 9e-32 |
| Alignm gaps (pig, cow): | 99, 27 |
| Conread position: | 268-444 |
| Cow position: | chr4:36517476-36517306 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 136 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 95, 0 |
| Conread position: | 268-452 |
| Cow position: | chr4:39864446-39864622 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 134 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 174, 95 |
| Conread position: | 268-461 |
| Cow position: | chr4:45840405-45840602 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 144 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 104, 129 |
| Conread position: | 269-447 |
| Cow position: | chr4:5624-5795 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 130 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 68, 82 |
| Conread position: | 269-459 |
| Cow position: | chr4:27656985-27657180 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 151 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 34, 20 |
| Conread position: | 269-461 |
| Cow position: | chr4:3519429-3519629 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 158 |
| Alignm E-value: | 5e-37 |
| Alignm gaps (pig, cow): | 101, 134 |
| Conread position: | 269-468 |
| Cow position: | chr4:21275593-21275397 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 153 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 97, 127 |
| Conread position: | 270-366 |
| Cow position: | chr4:34503304-34503401 (view UCSC Genome Browser custom track) |
| Alignm length: | 98 |
| Alignm identity: | 82 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 87, 0 |
| Conread position: | 270-443 |
| Cow position: | chr4:56570815-56570983 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 125 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 98, 0 |
| Conread position: | 270-447 |
| Cow position: | chr4:28854263-28854080 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 142 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 96, 26 |
| Conread position: | 270-453 |
| Cow position: | chr4:46049994-46049816 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 134 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 123, 87 |
| Conread position: | 270-463 |
| Cow position: | chr4:12561049-12561231 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 141 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 93, 0 |
| Conread position: | 271-442 |
| Cow position: | chr4:33970887-33970714 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 132 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 93, 109 |
| Conread position: | 271-444 |
| Cow position: | chr4:48409259-48409092 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 140 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 92, 0 |
| Conread position: | 271-462 |
| Cow position: | chr4:21479221-21479041 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 138 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 25, 0 |
| Conread position: | 272-442 |
| Cow position: | chr4:41370930-41370750 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 130 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 66, 0 |
| Conread position: | 274-442 |
| Cow position: | chr4:19578398-19578574 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 141 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 36, 134 |
| Conread position: | 274-465 |
| Cow position: | chr4:33360117-33360308 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 155 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 28, 20 |
| Conread position: | 274-469 |
| Cow position: | chr4:17790279-17790079 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 147 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 83, 134 |
| Conread position: | 280-459 |
| Cow position: | chr4:65291837-65291655 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 138 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 65, 117 |
| Conread position: | 280-463 |
| Cow position: | chr4:40392834-40393022 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 144 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 88, 119 |
| Conread position: | 280-463 |
| Cow position: | chr4:68806030-68806215 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 137 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 80, 117 |
| Conread position: | 281-417 |
| Cow position: | chr4:34983479-34983337 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 119 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 86, 120 |
| Conread position: | 281-449 |
| Cow position: | chr4:31136775-31136953 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 130 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 81, 0 |
| Conread position: | 281-451 |
| Cow position: | chr4:68590791-68590969 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 134 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 95, 0 |
| Conread position: | 281-460 |
| Cow position: | chr4:22215491-22215306 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 140 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 73, 122 |
| Conread position: | 282-444 |
| Cow position: | chr4:65463489-65463320 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 129 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 11, 120 |
| Conread position: | 282-448 |
| Cow position: | chr4:60302981-60302817 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 139 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 84, 17 |
| Conread position: | 283-440 |
| Cow position: | chr4:38700135-38699986 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 117 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 85, 0 |
| Conread position: | 283-442 |
| Cow position: | chr4:31348164-31348009 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 119 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 77, 51 |
| Conread position: | 283-448 |
| Cow position: | chr4:14063262-14063099 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 124 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 93, 22 |
| Conread position: | 283-448 |
| Cow position: | chr4:16881338-16881176 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 126 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 84, 37 |
| Conread position: | 283-453 |
| Cow position: | chr4:29291536-29291708 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 128 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 80, 123 |
| Conread position: | 283-458 |
| Cow position: | chr4:44681230-44681053 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 132 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 81, 74 |
| Conread position: | 283-467 |
| Cow position: | chr4:45985202-45985030 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 136 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 73, 0 |
| Conread position: | 284-438 |
| Cow position: | chr4:34700011-34699857 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 123 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 29, 12 |
| Conread position: | 284-453 |
| Cow position: | chr4:49794682-49794852 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 139 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 83, 112 |
| Conread position: | 284-457 |
| Cow position: | chr4:19292744-19292922 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 132 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 86, 113 |
| Conread position: | 284-457 |
| Cow position: | chr4:60897260-60897088 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 126 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 86, 116 |
| Conread position: | 284-457 |
| Cow position: | chr4:61066788-61066955 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 129 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 109, 0 |
| Conread position: | 284-461 |
| Cow position: | chr4:12052306-12052124 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 138 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 84, 36 |
| Conread position: | 284-463 |
| Cow position: | chr4:23646835-23646660 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 138 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 82, 40 |
| Conread position: | 284-464 |
| Cow position: | chr4:59015611-59015792 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 146 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 77, 115 |
| Conread position: | 284-468 |
| Cow position: | chr4:22849468-22849287 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 140 |
| Alignm E-value: | 8e-30 |
| Alignm gaps (pig, cow): | 86, 17 |
| Conread position: | 284-472 |
| Cow position: | chr4:15236655-15236850 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 141 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 82, 112 |
| Conread position: | 285-418 |
| Cow position: | chr4:3268341-3268203 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 111 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 82, 113 |
| Conread position: | 285-442 |
| Cow position: | chr4:54937920-54938071 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 117 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 32, 0 |
| Conread position: | 285-459 |
| Cow position: | chr4:25929240-25929417 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 129 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 99, 0 |
| Conread position: | 287-442 |
| Cow position: | chr4:2537303-2537460 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 121 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 15, 115 |
| Conread position: | 287-444 |
| Cow position: | chr4:66168306-66168145 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 122 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 83, 112 |
| Conread position: | 287-467 |
| Cow position: | chr4:42231998-42231817 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 125 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 100, 0 |
| Conread position: | 289-453 |
| Cow position: | chr4:22482353-22482522 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 128 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 81, 115 |
| Conread position: | 289-462 |
| Cow position: | chr4:30943982-30944165 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 138 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 75, 114 |
| Conread position: | 290-438 |
| Cow position: | chr4:29384206-29384054 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 114 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 77, 107 |
| Conread position: | 290-439 |
| Cow position: | chr4:39569232-39569385 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 121 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 76, 109 |
| Conread position: | 290-442 |
| Cow position: | chr4:59608156-59608005 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 116 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 86, 71 |
| Conread position: | 290-447 |
| Cow position: | chr4:20141943-20141792 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 116 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 62, 0 |
| Conread position: | 290-460 |
| Cow position: | chr4:20153520-20153345 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 133 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 77, 55 |
| Conread position: | 294-453 |
| Cow position: | chr4:64029144-64029295 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 122 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 5, 53 |
| Conread position: | 297-453 |
| Cow position: | chr4:64494838-64494985 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 118 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 60, 0 |
| Conread position: | 298-443 |
| Cow position: | chr4:30250234-30250091 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 112 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 72, 113 |
| Conread position: | 298-448 |
| Cow position: | chr4:12908410-12908566 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 120 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 72, 101 |
| Conread position: | 298-448 |
| Cow position: | chr4:66509674-66509823 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 119 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 69, 101 |
| Conread position: | 299-471 |
| Cow position: | chr4:12748375-12748200 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 128 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 67, 101 |
| Conread position: | 301-451 |
| Cow position: | chr4:19744915-19745070 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 116 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 75, 0 |
| Conread position: | 309-450 |
| Cow position: | chr4:49880647-49880507 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 113 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 59, 93 |
Show alignments to all cow chromosomes.