Cow genome map
| Conread name: | rcki31_e15.y1 |
| Conread position: | 232-463 |
| Cow position: | chr5:41010001-41009761 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 174 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 31, 48 |
| Conread position: | 241-447 |
| Cow position: | chr5:29895184-29895402 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 156 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 23, 11 |
| Conread position: | 241-447 |
| Cow position: | chr5:56877496-56877700 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 152 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 69, 13 |
| Conread position: | 241-448 |
| Cow position: | chr5:65941235-65941018 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 169 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 111, 13 |
| Conread position: | 245-455 |
| Cow position: | chr5:57935090-57934880 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 162 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 121, 21 |
| Conread position: | 247-366 |
| Cow position: | chr5:56339001-56338883 (view UCSC Genome Browser custom track) |
| Alignm length: | 120 |
| Alignm identity: | 95 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 247-438 |
| Cow position: | chr5:51065550-51065737 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 138 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 87, 19 |
| Conread position: | 247-438 |
| Cow position: | chr5:69383275-69383473 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 154 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 109, 19 |
| Conread position: | 247-442 |
| Cow position: | chr5:12434563-12434761 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 149 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 120, 19 |
| Conread position: | 247-443 |
| Cow position: | chr5:64176106-64175903 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 145 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 117, 19 |
| Conread position: | 247-446 |
| Cow position: | chr5:45845671-45845460 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 160 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 85, 19 |
| Conread position: | 247-447 |
| Cow position: | chr5:24996202-24995989 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 159 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 115, 18 |
| Conread position: | 247-448 |
| Cow position: | chr5:21617478-21617687 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 149 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 133, 19 |
| Conread position: | 247-450 |
| Cow position: | chr5:66257659-66257868 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 154 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 109, 19 |
| Conread position: | 247-453 |
| Cow position: | chr5:40241766-40241970 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 153 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 114, 19 |
| Conread position: | 247-457 |
| Cow position: | chr5:61725987-61726199 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 157 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 98, 19 |
| Conread position: | 247-457 |
| Cow position: | chr5:75228179-75227973 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 150 |
| Alignm E-value: | 8e-30 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 247-460 |
| Cow position: | chr5:72951864-72952068 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 146 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 247-461 |
| Cow position: | chr5:44446845-44446629 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 165 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 119, 19 |
| Conread position: | 247-464 |
| Cow position: | chr5:57686717-57686500 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 147 |
| Alignm E-value: | 1e-20 |
| Alignm gaps (pig, cow): | 130, 20 |
| Conread position: | 247-466 |
| Cow position: | chr5:57074311-57074086 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 169 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 116, 19 |
| Conread position: | 247-471 |
| Cow position: | chr5:46541035-46540801 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 171 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 35, 18 |
| Conread position: | 248-407 |
| Cow position: | chr5:6286412-6286258 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 122 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 23, 0 |
| Conread position: | 248-442 |
| Cow position: | chr5:29903502-29903317 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 147 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 248-444 |
| Cow position: | chr5:56548594-56548794 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 148 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 109, 6 |
| Conread position: | 248-448 |
| Cow position: | chr5:9894102-9893893 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 152 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 118, 18 |
| Conread position: | 248-462 |
| Cow position: | chr5:26167442-26167666 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 161 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 117, 20 |
| Conread position: | 248-463 |
| Cow position: | chr5:15363903-15364117 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 159 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 116, 18 |
| Conread position: | 256-430 |
| Cow position: | chr5:48009830-48009667 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 130 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 11, 0 |
| Conread position: | 259-418 |
| Cow position: | chr5:69636256-69636411 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 121 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 8, 0 |
| Conread position: | 260-439 |
| Cow position: | chr5:67118453-67118627 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 128 |
| Alignm E-value: | 1e-20 |
| Alignm gaps (pig, cow): | 123, 6 |
| Conread position: | 261-458 |
| Cow position: | chr5:54127323-54127530 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 149 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 90, 82 |
| Conread position: | 262-430 |
| Cow position: | chr5:38717344-38717509 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 121 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 27, 0 |
| Conread position: | 262-452 |
| Cow position: | chr5:42050586-42050778 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 145 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 97, 111 |
| Conread position: | 262-472 |
| Cow position: | chr5:50824626-50824839 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 162 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 102, 134 |
| Conread position: | 263-364 |
| Cow position: | chr5:64026984-64026883 (view UCSC Genome Browser custom track) |
| Alignm length: | 102 |
| Alignm identity: | 84 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 263-366 |
| Cow position: | chr5:17602169-17602067 (view UCSC Genome Browser custom track) |
| Alignm length: | 104 |
| Alignm identity: | 85 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 263-366 |
| Cow position: | chr5:35647378-35647481 (view UCSC Genome Browser custom track) |
| Alignm length: | 104 |
| Alignm identity: | 85 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 263-373 |
| Cow position: | chr5:38647675-38647787 (view UCSC Genome Browser custom track) |
| Alignm length: | 113 |
| Alignm identity: | 91 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 100, 0 |
| Conread position: | 263-375 |
| Cow position: | chr5:54375467-54375355 (view UCSC Genome Browser custom track) |
| Alignm length: | 113 |
| Alignm identity: | 91 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 263-426 |
| Cow position: | chr5:15722039-15721878 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 123 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 114, 132 |
| Conread position: | 263-438 |
| Cow position: | chr5:60523770-60523949 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 141 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 110, 31 |
| Conread position: | 263-439 |
| Cow position: | chr5:62172447-62172621 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 127 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 124, 95 |
| Conread position: | 263-440 |
| Cow position: | chr5:14314563-14314740 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 138 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 99, 132 |
| Conread position: | 263-440 |
| Cow position: | chr5:40109528-40109708 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 142 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 104, 40 |
| Conread position: | 263-442 |
| Cow position: | chr5:15991604-15991419 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 140 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 96, 82 |
| Conread position: | 263-442 |
| Cow position: | chr5:35190145-35190332 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 146 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 102, 138 |
| Conread position: | 263-442 |
| Cow position: | chr5:51298677-51298489 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 141 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 100, 33 |
| Conread position: | 263-442 |
| Cow position: | chr5:54312636-54312825 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 144 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 104, 149 |
| Conread position: | 263-442 |
| Cow position: | chr5:56524209-56524388 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 126 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 107, 130 |
| Conread position: | 263-442 |
| Cow position: | chr5:63192705-63192528 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 133 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 96, 33 |
| Conread position: | 263-443 |
| Cow position: | chr5:34288215-34288027 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 148 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 97, 31 |
| Conread position: | 263-443 |
| Cow position: | chr5:74643642-74643457 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 132 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 120, 26 |
| Conread position: | 263-444 |
| Cow position: | chr5:17104888-17105073 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 153 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 107, 31 |
| Conread position: | 263-444 |
| Cow position: | chr5:49474510-49474326 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 142 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 88, 140 |
| Conread position: | 263-447 |
| Cow position: | chr5:64139595-64139794 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 146 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 96, 145 |
| Conread position: | 263-448 |
| Cow position: | chr5:6572781-6572964 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 132 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 105, 51 |
| Conread position: | 263-448 |
| Cow position: | chr5:22795252-22795438 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 136 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 107, 29 |
| Conread position: | 263-448 |
| Cow position: | chr5:34562051-34562241 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 139 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 263-448 |
| Cow position: | chr5:59626936-59626740 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 144 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 103, 80 |
| Conread position: | 263-448 |
| Cow position: | chr5:65967696-65967505 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 140 |
| Alignm E-value: | 1e-20 |
| Alignm gaps (pig, cow): | 103, 168 |
| Conread position: | 263-457 |
| Cow position: | chr5:21828903-21829104 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 156 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 105, 57 |
| Conread position: | 263-458 |
| Cow position: | chr5:30276725-30276931 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 157 |
| Alignm E-value: | 8e-30 |
| Alignm gaps (pig, cow): | 82, 147 |
| Conread position: | 263-458 |
| Cow position: | chr5:56014766-56014964 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 155 |
| Alignm E-value: | 6e-38 |
| Alignm gaps (pig, cow): | 101, 133 |
| Conread position: | 263-460 |
| Cow position: | chr5:12322769-12322567 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 156 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 90, 33 |
| Conread position: | 263-461 |
| Cow position: | chr5:51289556-51289357 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 151 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 105, 31 |
| Conread position: | 263-462 |
| Cow position: | chr5:3817652-3817441 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 154 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 100, 140 |
| Conread position: | 263-462 |
| Cow position: | chr5:16893736-16893532 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 147 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 93, 137 |
| Conread position: | 263-462 |
| Cow position: | chr5:26253138-26252949 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 153 |
| Alignm E-value: | 8e-30 |
| Alignm gaps (pig, cow): | 175, 99 |
| Conread position: | 263-462 |
| Cow position: | chr5:26549105-26548896 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 162 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 99, 141 |
| Conread position: | 263-465 |
| Cow position: | chr5:69337855-69338063 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 149 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 107, 0 |
| Conread position: | 263-471 |
| Cow position: | chr5:50943122-50942903 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 160 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 78, 139 |
| Conread position: | 263-471 |
| Cow position: | chr5:66339114-66339328 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 154 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 107, 33 |
| Conread position: | 263-472 |
| Cow position: | chr5:56467726-56467926 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 151 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 55, 0 |
| Conread position: | 264-441 |
| Cow position: | chr5:35976549-35976719 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 137 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 32, 0 |
| Conread position: | 264-442 |
| Cow position: | chr5:35394397-35394213 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 140 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 99, 137 |
| Conread position: | 265-431 |
| Cow position: | chr5:16668734-16668908 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 134 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 109, 143 |
| Conread position: | 265-453 |
| Cow position: | chr5:8736242-8736039 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 155 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 98, 39 |
| Conread position: | 265-472 |
| Cow position: | chr5:63831965-63832174 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 149 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 99, 135 |
| Conread position: | 266-366 |
| Cow position: | chr5:58446845-58446945 (view UCSC Genome Browser custom track) |
| Alignm length: | 101 |
| Alignm identity: | 84 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 266-369 |
| Cow position: | chr5:49501786-49501683 (view UCSC Genome Browser custom track) |
| Alignm length: | 104 |
| Alignm identity: | 86 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 266-422 |
| Cow position: | chr5:51125971-51125812 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 125 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 98, 132 |
| Conread position: | 266-436 |
| Cow position: | chr5:16179473-16179303 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 126 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 100, 129 |
| Conread position: | 266-438 |
| Cow position: | chr5:4267708-4267882 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 139 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 100, 123 |
| Conread position: | 266-442 |
| Cow position: | chr5:30302932-30303107 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 141 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 89, 28 |
| Conread position: | 266-452 |
| Cow position: | chr5:30561970-30562163 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 143 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 86, 82 |
| Conread position: | 266-453 |
| Cow position: | chr5:6528721-6528898 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 140 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 63, 102 |
| Conread position: | 266-453 |
| Cow position: | chr5:26147629-26147825 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 150 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 97, 140 |
| Conread position: | 266-453 |
| Cow position: | chr5:57497386-57497188 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 147 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 99, 0 |
| Conread position: | 266-455 |
| Cow position: | chr5:41165126-41165324 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 150 |
| Alignm E-value: | 8e-30 |
| Alignm gaps (pig, cow): | 101, 140 |
| Conread position: | 266-459 |
| Cow position: | chr5:50101338-50101132 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 155 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 32, 144 |
| Conread position: | 266-460 |
| Cow position: | chr5:19079290-19079489 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 144 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 98, 63 |
| Conread position: | 266-461 |
| Cow position: | chr5:1694050-1693848 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 150 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 102, 139 |
| Conread position: | 266-462 |
| Cow position: | chr5:7723703-7723890 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 140 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 102, 0 |
| Conread position: | 267-366 |
| Cow position: | chr5:43992363-43992462 (view UCSC Genome Browser custom track) |
| Alignm length: | 100 |
| Alignm identity: | 82 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 267-375 |
| Cow position: | chr5:17605095-17604985 (view UCSC Genome Browser custom track) |
| Alignm length: | 111 |
| Alignm identity: | 89 |
| Alignm E-value: | 1e-20 |
| Alignm gaps (pig, cow): | 78, 0 |
| Conread position: | 267-441 |
| Cow position: | chr5:51247092-51246912 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 136 |
| Alignm E-value: | 1e-20 |
| Alignm gaps (pig, cow): | 52, 152 |
| Conread position: | 267-442 |
| Cow position: | chr5:50575823-50575994 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 128 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 59, 0 |
| Conread position: | 267-444 |
| Cow position: | chr5:28302704-28302528 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 140 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 99, 135 |
| Conread position: | 267-444 |
| Cow position: | chr5:30253780-30253968 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 142 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 103, 0 |
| Conread position: | 267-453 |
| Cow position: | chr5:42670825-42670636 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 141 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 6, 42 |
| Conread position: | 267-457 |
| Cow position: | chr5:22242728-22242532 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 152 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 6, 30 |
| Conread position: | 267-458 |
| Cow position: | chr5:47601851-47602048 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 144 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 34, 27 |
| Conread position: | 267-461 |
| Cow position: | chr5:41984393-41984586 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 140 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 22, 136 |
| Conread position: | 267-464 |
| Cow position: | chr5:52853010-52853216 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 154 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 85, 79 |
| Conread position: | 268-441 |
| Cow position: | chr5:70591594-70591767 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 132 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 105, 132 |
| Conread position: | 268-444 |
| Cow position: | chr5:40237251-40237417 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 131 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 171, 93 |
| Conread position: | 269-452 |
| Cow position: | chr5:22186459-22186640 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 133 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 98, 118 |
| Conread position: | 270-442 |
| Cow position: | chr5:3582602-3582781 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 139 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 89, 130 |
| Conread position: | 271-444 |
| Cow position: | chr5:56028498-56028317 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 146 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 99, 132 |
| Conread position: | 271-451 |
| Cow position: | chr5:44847978-44847791 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 141 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 103, 128 |
| Conread position: | 272-448 |
| Cow position: | chr5:34918390-34918575 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 144 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 95, 130 |
| Conread position: | 273-453 |
| Cow position: | chr5:1085807-1085977 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 132 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 169, 95 |
| Conread position: | 274-437 |
| Cow position: | chr5:9559467-9559634 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 126 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 92, 125 |
| Conread position: | 274-469 |
| Cow position: | chr5:38833167-38833368 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 145 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 96, 143 |
| Conread position: | 280-442 |
| Cow position: | chr5:70572423-70572584 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 128 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 22, 34 |
| Conread position: | 280-443 |
| Cow position: | chr5:60100522-60100689 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 133 |
| Alignm E-value: | 9e-31 |
| Alignm gaps (pig, cow): | 90, 62 |
| Conread position: | 280-443 |
| Cow position: | chr5:60153827-60153994 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 135 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 90, 62 |
| Conread position: | 281-430 |
| Cow position: | chr5:22387006-22386853 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 116 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 110, 83 |
| Conread position: | 281-442 |
| Cow position: | chr5:7558715-7558566 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 122 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 82, 0 |
| Conread position: | 281-442 |
| Cow position: | chr5:7713813-7713974 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 121 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 7, 114 |
| Conread position: | 281-443 |
| Cow position: | chr5:49207274-49207102 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 128 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 85, 0 |
| Conread position: | 281-451 |
| Cow position: | chr5:29599493-29599315 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 141 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 86, 120 |
| Conread position: | 281-453 |
| Cow position: | chr5:37253482-37253660 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 142 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 72, 120 |
| Conread position: | 281-461 |
| Cow position: | chr5:60207761-60207950 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 141 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 80, 123 |
| Conread position: | 283-452 |
| Cow position: | chr5:3771901-3772077 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 135 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 69, 60 |
| Conread position: | 283-457 |
| Cow position: | chr5:71454557-71454391 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 126 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 85, 0 |
| Conread position: | 283-471 |
| Cow position: | chr5:4280503-4280696 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 146 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 84, 125 |
| Conread position: | 284-441 |
| Cow position: | chr5:47696394-47696233 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 121 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 80, 104 |
| Conread position: | 284-457 |
| Cow position: | chr5:36822939-36823110 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 128 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 92, 126 |
| Conread position: | 284-460 |
| Cow position: | chr5:21721414-21721231 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 137 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 82, 135 |
| Conread position: | 285-472 |
| Cow position: | chr5:58401626-58401825 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 145 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 85, 0 |
| Conread position: | 286-448 |
| Cow position: | chr5:52211629-52211457 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 128 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 87, 0 |
| Conread position: | 286-453 |
| Cow position: | chr5:34625018-34625185 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 133 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 84, 114 |
| Conread position: | 286-464 |
| Cow position: | chr5:29010314-29010495 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 129 |
| Alignm E-value: | 1e-20 |
| Alignm gaps (pig, cow): | 97, 111 |
| Conread position: | 287-462 |
| Cow position: | chr5:25462147-25462328 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 140 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 75, 115 |
| Conread position: | 288-464 |
| Cow position: | chr5:22957470-22957650 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 136 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 80, 117 |
| Conread position: | 290-452 |
| Cow position: | chr5:8136533-8136695 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 117 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 94, 136 |
| Conread position: | 290-453 |
| Cow position: | chr5:12478896-12478736 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 124 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 72, 0 |
| Conread position: | 290-460 |
| Cow position: | chr5:37672262-37672425 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 127 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 154, 72 |
| Conread position: | 290-465 |
| Cow position: | chr5:67339945-67340131 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 137 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 80, 0 |
| Conread position: | 298-444 |
| Cow position: | chr5:35763332-35763472 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 113 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 46, 0 |
| Conread position: | 298-448 |
| Cow position: | chr5:43923091-43922938 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 114 |
| Alignm E-value: | 1e-20 |
| Alignm gaps (pig, cow): | 68, 35 |
| Conread position: | 299-444 |
| Cow position: | chr5:42667340-42667197 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 111 |
| Alignm E-value: | 1e-20 |
| Alignm gaps (pig, cow): | 53, 20 |
| Conread position: | 301-448 |
| Cow position: | chr5:64061092-64061245 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 122 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 62, 103 |
| Conread position: | 304-440 |
| Cow position: | chr5:70545217-70545080 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 108 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 66, 13 |
| Conread position: | 305-446 |
| Cow position: | chr5:17537596-17537449 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 110 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 82, 0 |
| Conread position: | 311-443 |
| Cow position: | chr5:54149929-54150061 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 105 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 77, 60 |
| Conread position: | 311-444 |
| Cow position: | chr5:21520358-21520222 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 103 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 59, 0 |
| Conread position: | 321-448 |
| Cow position: | chr5:18706060-18706187 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 105 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 43, 73 |
Show alignments to all cow chromosomes.