Cow genome map
| Conread name: | rcki31_e15.y1 |
| Conread position: | 240-462 |
| Cow position: | chr9:4341118-4341347 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 173 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 127, 14 |
| Conread position: | 241-442 |
| Cow position: | chr9:19555419-19555219 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 152 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 17, 66 |
| Conread position: | 246-361 |
| Cow position: | chr9:4267946-4268060 (view UCSC Genome Browser custom track) |
| Alignm length: | 116 |
| Alignm identity: | 92 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 246-447 |
| Cow position: | chr9:13460387-13460583 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 147 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 123, 7 |
| Conread position: | 246-451 |
| Cow position: | chr9:34024735-34024519 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 159 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 121, 19 |
| Conread position: | 247-366 |
| Cow position: | chr9:33119853-33119971 (view UCSC Genome Browser custom track) |
| Alignm length: | 120 |
| Alignm identity: | 96 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 247-374 |
| Cow position: | chr9:55354646-55354520 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 101 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 247-442 |
| Cow position: | chr9:3924478-3924286 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 150 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 86, 19 |
| Conread position: | 247-442 |
| Cow position: | chr9:24887241-24887035 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 159 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 120, 19 |
| Conread position: | 247-442 |
| Cow position: | chr9:43757576-43757374 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 152 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 33, 19 |
| Conread position: | 247-443 |
| Cow position: | chr9:56453371-56453175 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 148 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 119, 19 |
| Conread position: | 247-446 |
| Cow position: | chr9:5227138-5227334 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 149 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 95, 20 |
| Conread position: | 247-447 |
| Cow position: | chr9:37199162-37198952 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 161 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 119, 19 |
| Conread position: | 247-448 |
| Cow position: | chr9:34374889-34375103 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 158 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 123, 19 |
| Conread position: | 247-448 |
| Cow position: | chr9:36628153-36627946 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 155 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 108, 19 |
| Conread position: | 247-448 |
| Cow position: | chr9:57131530-57131321 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 155 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 120, 19 |
| Conread position: | 247-449 |
| Cow position: | chr9:59998001-59998207 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 150 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 109, 19 |
| Conread position: | 247-452 |
| Cow position: | chr9:17872075-17872287 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 162 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 120, 19 |
| Conread position: | 247-456 |
| Cow position: | chr9:20091082-20090878 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 155 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 23, 19 |
| Conread position: | 247-458 |
| Cow position: | chr9:39011434-39011652 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 167 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 120, 19 |
| Conread position: | 247-463 |
| Cow position: | chr9:28747485-28747708 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 172 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 119, 19 |
| Conread position: | 247-464 |
| Cow position: | chr9:23970861-23971088 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 162 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 59, 19 |
| Conread position: | 247-468 |
| Cow position: | chr9:9686379-9686614 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 167 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 123, 20 |
| Conread position: | 247-468 |
| Cow position: | chr9:45141565-45141792 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 171 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 119, 20 |
| Conread position: | 247-468 |
| Cow position: | chr9:53762731-53762502 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 168 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 23, 19 |
| Conread position: | 248-443 |
| Cow position: | chr9:5263532-5263333 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 149 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 115, 18 |
| Conread position: | 248-459 |
| Cow position: | chr9:42586522-42586736 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 161 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 119, 18 |
| Conread position: | 255-472 |
| Cow position: | chr9:24079333-24079107 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 171 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 10, 151 |
| Conread position: | 257-458 |
| Cow position: | chr9:6189340-6189549 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 159 |
| Alignm E-value: | 9e-32 |
| Alignm gaps (pig, cow): | 85, 9 |
| Conread position: | 258-373 |
| Cow position: | chr9:17740918-17741032 (view UCSC Genome Browser custom track) |
| Alignm length: | 117 |
| Alignm identity: | 94 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 105, 8 |
| Conread position: | 258-381 |
| Cow position: | chr9:53045322-53045444 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 99 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 8, 0 |
| Conread position: | 259-442 |
| Cow position: | chr9:19718317-19718504 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 149 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 104, 7 |
| Conread position: | 259-451 |
| Cow position: | chr9:8636690-8636499 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 148 |
| Alignm E-value: | 8e-31 |
| Alignm gaps (pig, cow): | 106, 7 |
| Conread position: | 261-464 |
| Cow position: | chr9:55191459-55191248 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 152 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 48, 152 |
| Conread position: | 262-438 |
| Cow position: | chr9:7805941-7806120 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 136 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 104, 5 |
| Conread position: | 263-366 |
| Cow position: | chr9:6293615-6293512 (view UCSC Genome Browser custom track) |
| Alignm length: | 104 |
| Alignm identity: | 84 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 263-366 |
| Cow position: | chr9:8562840-8562739 (view UCSC Genome Browser custom track) |
| Alignm length: | 104 |
| Alignm identity: | 88 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 27, 0 |
| Conread position: | 263-366 |
| Cow position: | chr9:26277848-26277747 (view UCSC Genome Browser custom track) |
| Alignm length: | 104 |
| Alignm identity: | 87 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 21, 0 |
| Conread position: | 263-374 |
| Cow position: | chr9:16137322-16137433 (view UCSC Genome Browser custom track) |
| Alignm length: | 112 |
| Alignm identity: | 88 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 263-430 |
| Cow position: | chr9:34958036-34958210 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 135 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 104, 139 |
| Conread position: | 263-431 |
| Cow position: | chr9:39758538-39758371 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 124 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 144, 112 |
| Conread position: | 263-442 |
| Cow position: | chr9:13169643-13169835 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 145 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 90, 0 |
| Conread position: | 263-442 |
| Cow position: | chr9:25556992-25556813 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 139 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 108, 132 |
| Conread position: | 263-442 |
| Cow position: | chr9:33151762-33151579 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 138 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 104, 136 |
| Conread position: | 263-442 |
| Cow position: | chr9:55256532-55256719 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 141 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 100, 133 |
| Conread position: | 263-446 |
| Cow position: | chr9:4241426-4241233 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 143 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 66, 142 |
| Conread position: | 263-448 |
| Cow position: | chr9:26394330-26394524 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 148 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 104, 18 |
| Conread position: | 263-452 |
| Cow position: | chr9:43202354-43202168 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 139 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 79, 84 |
| Conread position: | 263-453 |
| Cow position: | chr9:3378771-3378581 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 140 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 99, 24 |
| Conread position: | 263-455 |
| Cow position: | chr9:59897609-59897413 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 156 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 104, 18 |
| Conread position: | 263-456 |
| Cow position: | chr9:21387440-21387247 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 142 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 102, 133 |
| Conread position: | 263-458 |
| Cow position: | chr9:1867471-1867284 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 140 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 103, 114 |
| Conread position: | 263-460 |
| Cow position: | chr9:23955960-23956165 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 159 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 111, 140 |
| Conread position: | 263-464 |
| Cow position: | chr9:8628898-8629104 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 155 |
| Alignm E-value: | 9e-32 |
| Alignm gaps (pig, cow): | 104, 27 |
| Conread position: | 263-465 |
| Cow position: | chr9:29006577-29006370 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 154 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 96, 141 |
| Conread position: | 263-465 |
| Cow position: | chr9:33584665-33584875 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 158 |
| Alignm E-value: | 9e-32 |
| Alignm gaps (pig, cow): | 103, 191 |
| Conread position: | 263-466 |
| Cow position: | chr9:34286819-34286605 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 163 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 104, 147 |
| Conread position: | 263-468 |
| Cow position: | chr9:12910381-12910595 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 155 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 97, 197 |
| Conread position: | 263-471 |
| Cow position: | chr9:26279149-26279371 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 167 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 107, 146 |
| Conread position: | 263-471 |
| Cow position: | chr9:50606928-50607127 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 155 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 33, 0 |
| Conread position: | 263-471 |
| Cow position: | chr9:63361699-63361910 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 160 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 107, 138 |
| Conread position: | 263-472 |
| Cow position: | chr9:5186847-5187060 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 154 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 96, 31 |
| Conread position: | 263-472 |
| Cow position: | chr9:41785230-41785021 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 158 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 103, 77 |
| Conread position: | 265-440 |
| Cow position: | chr9:5259293-5259127 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 133 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 82, 0 |
| Conread position: | 265-469 |
| Cow position: | chr9:20465945-20466141 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 147 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 266-432 |
| Cow position: | chr9:60355195-60355360 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 121 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 88, 104 |
| Conread position: | 266-437 |
| Cow position: | chr9:19903099-19902927 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 129 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 104, 131 |
| Conread position: | 266-437 |
| Cow position: | chr9:34707295-34707475 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 140 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 95, 51 |
| Conread position: | 266-438 |
| Cow position: | chr9:11098439-11098617 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 140 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 93, 15 |
| Conread position: | 266-438 |
| Cow position: | chr9:29819735-29819560 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 132 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 103, 67 |
| Conread position: | 266-444 |
| Cow position: | chr9:40603685-40603495 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 137 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 104, 0 |
| Conread position: | 266-446 |
| Cow position: | chr9:61303017-61302829 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 144 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 98, 137 |
| Conread position: | 266-447 |
| Cow position: | chr9:36401648-36401835 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 141 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 97, 140 |
| Conread position: | 266-447 |
| Cow position: | chr9:55807648-55807459 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 145 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 100, 137 |
| Conread position: | 266-448 |
| Cow position: | chr9:5433649-5433468 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 135 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 174, 132 |
| Conread position: | 266-452 |
| Cow position: | chr9:26403802-26403617 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 135 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 101, 130 |
| Conread position: | 266-453 |
| Cow position: | chr9:5756971-5757156 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 144 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 87, 137 |
| Conread position: | 266-453 |
| Cow position: | chr9:11123468-11123661 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 149 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 86, 43 |
| Conread position: | 266-454 |
| Cow position: | chr9:14738266-14738069 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 140 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 102, 137 |
| Conread position: | 266-456 |
| Cow position: | chr9:34135733-34135546 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 138 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 110, 82 |
| Conread position: | 266-457 |
| Cow position: | chr9:33347473-33347666 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 145 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 99, 129 |
| Conread position: | 266-457 |
| Cow position: | chr9:34917170-34917361 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 143 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 98, 14 |
| Conread position: | 266-458 |
| Cow position: | chr9:9595933-9596138 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 153 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 31, 143 |
| Conread position: | 266-460 |
| Cow position: | chr9:48016998-48016801 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 140 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 25, 134 |
| Conread position: | 266-463 |
| Cow position: | chr9:7543242-7543448 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 158 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 44, 141 |
| Conread position: | 266-465 |
| Cow position: | chr9:8998366-8998158 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 150 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 77, 135 |
| Conread position: | 266-466 |
| Cow position: | chr9:48809155-48808951 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 143 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 113, 80 |
| Conread position: | 266-467 |
| Cow position: | chr9:22318367-22318164 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 151 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 15, 72 |
| Conread position: | 266-470 |
| Cow position: | chr9:35295707-35295495 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 152 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 92, 82 |
| Conread position: | 266-470 |
| Cow position: | chr9:39135611-39135818 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 152 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 40, 80 |
| Conread position: | 266-472 |
| Cow position: | chr9:4630120-4629909 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 150 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 101, 23 |
| Conread position: | 266-472 |
| Cow position: | chr9:32052293-32052076 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 161 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 101, 141 |
| Conread position: | 266-472 |
| Cow position: | chr9:55321654-55321453 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 144 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 185, 102 |
| Conread position: | 267-374 |
| Cow position: | chr9:19758736-19758626 (view UCSC Genome Browser custom track) |
| Alignm length: | 111 |
| Alignm identity: | 92 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 99, 0 |
| Conread position: | 267-436 |
| Cow position: | chr9:32773229-32773058 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 130 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 99, 135 |
| Conread position: | 267-471 |
| Cow position: | chr9:22440466-22440672 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 149 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 92, 27 |
| Conread position: | 267-472 |
| Cow position: | chr9:58131937-58132150 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 155 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 96, 66 |
| Conread position: | 268-438 |
| Cow position: | chr9:41679762-41679596 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 125 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 95, 0 |
| Conread position: | 268-470 |
| Cow position: | chr9:13742538-13742338 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 144 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 171, 100 |
| Conread position: | 269-466 |
| Cow position: | chr9:18003178-18003373 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 149 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 82, 52 |
| Conread position: | 269-467 |
| Cow position: | chr9:6192445-6192652 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 160 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 27, 89 |
| Conread position: | 270-447 |
| Cow position: | chr9:63784901-63785085 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 135 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 97, 136 |
| Conread position: | 270-448 |
| Cow position: | chr9:9459998-9459813 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 145 |
| Alignm E-value: | 9e-32 |
| Alignm gaps (pig, cow): | 29, 133 |
| Conread position: | 270-452 |
| Cow position: | chr9:51720884-51721067 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 135 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 100, 126 |
| Conread position: | 270-453 |
| Cow position: | chr9:54681522-54681340 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 140 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 96, 78 |
| Conread position: | 270-466 |
| Cow position: | chr9:44584606-44584404 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 152 |
| Alignm E-value: | 9e-32 |
| Alignm gaps (pig, cow): | 87, 128 |
| Conread position: | 271-453 |
| Cow position: | chr9:4256975-4257158 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 139 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 97, 112 |
| Conread position: | 274-430 |
| Cow position: | chr9:25400190-25400345 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 122 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 90, 26 |
| Conread position: | 274-456 |
| Cow position: | chr9:8834118-8834316 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 143 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 109, 0 |
| Conread position: | 275-442 |
| Cow position: | chr9:52518818-52518991 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 128 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 89, 58 |
| Conread position: | 276-453 |
| Cow position: | chr9:6952106-6951932 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 130 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 94, 12 |
| Conread position: | 280-456 |
| Cow position: | chr9:48634897-48635067 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 128 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 88, 0 |
| Conread position: | 281-442 |
| Cow position: | chr9:39654408-39654255 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 131 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 82, 0 |
| Conread position: | 281-447 |
| Cow position: | chr9:26344966-26345137 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 129 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 70, 119 |
| Conread position: | 281-458 |
| Cow position: | chr9:44918279-44918463 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 141 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 102, 5 |
| Conread position: | 282-468 |
| Cow position: | chr9:6237491-6237687 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 143 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 13, 122 |
| Conread position: | 282-469 |
| Cow position: | chr9:33101114-33101306 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 150 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 84, 116 |
| Conread position: | 282-472 |
| Cow position: | chr9:11380645-11380846 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 155 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 82, 0 |
| Conread position: | 283-442 |
| Cow position: | chr9:11271355-11271513 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 123 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 69, 65 |
| Conread position: | 283-442 |
| Cow position: | chr9:57642507-57642343 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 123 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 20, 133 |
| Conread position: | 283-452 |
| Cow position: | chr9:18439171-18439331 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 126 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 80, 0 |
| Conread position: | 283-456 |
| Cow position: | chr9:26388208-26388032 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 131 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 57, 116 |
| Conread position: | 284-451 |
| Cow position: | chr9:9516754-9516927 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 127 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 73, 119 |
| Conread position: | 284-451 |
| Cow position: | chr9:20579595-20579768 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 137 |
| Alignm E-value: | 8e-31 |
| Alignm gaps (pig, cow): | 82, 121 |
| Conread position: | 284-453 |
| Cow position: | chr9:14519382-14519556 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 137 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 86, 6 |
| Conread position: | 284-462 |
| Cow position: | chr9:6852068-6852242 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 132 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 168, 89 |
| Conread position: | 285-458 |
| Cow position: | chr9:33399085-33398920 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 126 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 93, 0 |
| Conread position: | 286-471 |
| Cow position: | chr9:11413131-11413315 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 134 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 82, 63 |
| Conread position: | 290-440 |
| Cow position: | chr9:34666437-34666284 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 120 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 77, 106 |
| Conread position: | 290-445 |
| Cow position: | chr9:61847131-61847288 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 123 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 80, 107 |
| Conread position: | 290-447 |
| Cow position: | chr9:32812174-32812012 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 122 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 61, 113 |
| Conread position: | 290-451 |
| Cow position: | chr9:47928899-47928741 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 119 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 58, 0 |
| Conread position: | 290-454 |
| Cow position: | chr9:11299687-11299855 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 125 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 66, 102 |
| Conread position: | 290-457 |
| Cow position: | chr9:9495149-9494974 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 127 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 83, 0 |
| Conread position: | 290-457 |
| Cow position: | chr9:40587053-40586884 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 136 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 41, 108 |
| Conread position: | 290-461 |
| Cow position: | chr9:17719255-17719085 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 128 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 51, 30 |
| Conread position: | 290-461 |
| Cow position: | chr9:18380858-18380678 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 137 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 77, 116 |
| Conread position: | 290-464 |
| Cow position: | chr9:12269023-12268844 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 135 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 76, 40 |
| Conread position: | 291-460 |
| Cow position: | chr9:51891238-51891064 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 132 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 66, 55 |
| Conread position: | 299-462 |
| Cow position: | chr9:26493793-26493629 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 127 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 65, 94 |
| Conread position: | 305-442 |
| Cow position: | chr9:41646219-41646357 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 103 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 89, 0 |
| Conread position: | 309-458 |
| Cow position: | chr9:63713060-63712908 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 117 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 57, 90 |
| Conread position: | 310-472 |
| Cow position: | chr9:53120966-53120804 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 125 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 83, 73 |
| Conread position: | 311-457 |
| Cow position: | chr9:33247998-33248147 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 116 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 56, 93 |
| Conread position: | 312-444 |
| Cow position: | chr9:41363196-41363326 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 107 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 97, 79 |
| Conread position: | 328-463 |
| Cow position: | chr9:42608723-42608586 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 106 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 42, 74 |
Show alignments to all cow chromosomes.