Cow genome map
| Conread name: | rcki31_e15.y1 |
| Conread position: | 236-461 |
| Cow position: | chrX:39489180-39488963 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 155 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 204, 36 |
| Conread position: | 240-360 |
| Cow position: | chrX:29230008-29230132 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 101 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 240-447 |
| Cow position: | chrX:33855211-33854993 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 162 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 26, 85 |
| Conread position: | 241-465 |
| Cow position: | chrX:13177462-13177233 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 176 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 126, 165 |
| Conread position: | 241-466 |
| Cow position: | chrX:12972697-12972930 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 169 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 86, 167 |
| Conread position: | 246-465 |
| Cow position: | chrX:27306474-27306689 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 166 |
| Alignm E-value: | 5.99994e-41 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 247-366 |
| Cow position: | chrX:4615989-4615872 (view UCSC Genome Browser custom track) |
| Alignm length: | 120 |
| Alignm identity: | 94 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 247-366 |
| Cow position: | chrX:17725996-17726115 (view UCSC Genome Browser custom track) |
| Alignm length: | 121 |
| Alignm identity: | 95 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 110, 20 |
| Conread position: | 247-366 |
| Cow position: | chrX:40532022-40531904 (view UCSC Genome Browser custom track) |
| Alignm length: | 120 |
| Alignm identity: | 95 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 247-366 |
| Cow position: | chrX:41884391-41884273 (view UCSC Genome Browser custom track) |
| Alignm length: | 120 |
| Alignm identity: | 96 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 247-366 |
| Cow position: | chrX:46429798-46429680 (view UCSC Genome Browser custom track) |
| Alignm length: | 120 |
| Alignm identity: | 97 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 247-394 |
| Cow position: | chrX:878359-878210 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 118 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 119, 19 |
| Conread position: | 247-438 |
| Cow position: | chrX:22074817-22075019 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 152 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 51, 19 |
| Conread position: | 247-448 |
| Cow position: | chrX:4466988-4467185 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 155 |
| Alignm E-value: | 5e-39 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 247-448 |
| Cow position: | chrX:19469485-19469279 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 155 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 110, 19 |
| Conread position: | 247-452 |
| Cow position: | chrX:22392963-22392749 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 151 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 109, 19 |
| Conread position: | 247-453 |
| Cow position: | chrX:41871088-41871296 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 154 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 140, 19 |
| Conread position: | 247-456 |
| Cow position: | chrX:34532541-34532755 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 157 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 112, 18 |
| Conread position: | 247-458 |
| Cow position: | chrX:6544278-6544491 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 160 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 127, 18 |
| Conread position: | 247-459 |
| Cow position: | chrX:31744984-31744769 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 153 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 115, 150 |
| Conread position: | 247-460 |
| Cow position: | chrX:27145625-27145844 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 165 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 109, 19 |
| Conread position: | 247-466 |
| Cow position: | chrX:27668937-27668708 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 180 |
| Alignm E-value: | 5e-39 |
| Alignm gaps (pig, cow): | 119, 19 |
| Conread position: | 247-468 |
| Cow position: | chrX:6599761-6599520 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 181 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 120, 19 |
| Conread position: | 247-468 |
| Cow position: | chrX:35985841-35986069 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 173 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 117, 19 |
| Conread position: | 247-469 |
| Cow position: | chrX:4289463-4289687 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 169 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 24, 152 |
| Conread position: | 247-471 |
| Cow position: | chrX:20957259-20957494 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 175 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 119, 19 |
| Conread position: | 248-438 |
| Cow position: | chrX:42927802-42927606 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 145 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 118, 18 |
| Conread position: | 248-458 |
| Cow position: | chrX:29050272-29050484 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 166 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 105, 18 |
| Conread position: | 254-442 |
| Cow position: | chrX:34314052-34314249 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 147 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 109, 12 |
| Conread position: | 256-430 |
| Cow position: | chrX:41192734-41192905 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 132 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 114, 10 |
| Conread position: | 256-444 |
| Cow position: | chrX:45502175-45502366 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 143 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 124, 158 |
| Conread position: | 259-442 |
| Cow position: | chrX:20583699-20583888 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 147 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 107, 8 |
| Conread position: | 259-450 |
| Cow position: | chrX:45429989-45429796 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 149 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 104, 7 |
| Conread position: | 259-453 |
| Cow position: | chrX:39642591-39642388 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 150 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 34, 68 |
| Conread position: | 259-461 |
| Cow position: | chrX:27431885-27431675 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 163 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 102, 7 |
| Conread position: | 259-464 |
| Cow position: | chrX:12437237-12437033 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 154 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 109, 7 |
| Conread position: | 259-466 |
| Cow position: | chrX:5919525-5919739 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 161 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 66, 7 |
| Conread position: | 259-472 |
| Cow position: | chrX:34411879-34412105 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 169 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 108, 7 |
| Conread position: | 260-442 |
| Cow position: | chrX:34376976-34377167 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 141 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 103, 8 |
| Conread position: | 261-438 |
| Cow position: | chrX:21986257-21986077 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 144 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 102, 137 |
| Conread position: | 262-451 |
| Cow position: | chrX:27415545-27415350 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 142 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 104, 141 |
| Conread position: | 263-364 |
| Cow position: | chrX:31312065-31312166 (view UCSC Genome Browser custom track) |
| Alignm length: | 102 |
| Alignm identity: | 86 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 263-366 |
| Cow position: | chrX:42381076-42380973 (view UCSC Genome Browser custom track) |
| Alignm length: | 104 |
| Alignm identity: | 86 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 263-429 |
| Cow position: | chrX:46070134-46069970 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 132 |
| Alignm E-value: | 7e-32 |
| Alignm gaps (pig, cow): | 59, 107 |
| Conread position: | 263-432 |
| Cow position: | chrX:40685292-40685111 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 139 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 107, 142 |
| Conread position: | 263-438 |
| Cow position: | chrX:4825796-4825624 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 129 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 103, 42 |
| Conread position: | 263-441 |
| Cow position: | chrX:4942222-4942053 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 139 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 145, 99 |
| Conread position: | 263-441 |
| Cow position: | chrX:8925735-8925907 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 140 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 85, 0 |
| Conread position: | 263-441 |
| Cow position: | chrX:37574876-37575043 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 138 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 97, 0 |
| Conread position: | 263-442 |
| Cow position: | chrX:38560595-38560778 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 138 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 100, 136 |
| Conread position: | 263-442 |
| Cow position: | chrX:41453338-41453527 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 136 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 107, 0 |
| Conread position: | 263-443 |
| Cow position: | chrX:39290395-39290584 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 148 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 85, 140 |
| Conread position: | 263-444 |
| Cow position: | chrX:9201584-9201773 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 151 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 107, 139 |
| Conread position: | 263-444 |
| Cow position: | chrX:31480007-31480196 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 140 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 87, 39 |
| Conread position: | 263-446 |
| Cow position: | chrX:11326061-11325877 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 141 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 104, 72 |
| Conread position: | 263-447 |
| Cow position: | chrX:5026292-5026484 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 147 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 101, 139 |
| Conread position: | 263-447 |
| Cow position: | chrX:32208786-32208594 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 145 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 113, 55 |
| Conread position: | 263-448 |
| Cow position: | chrX:31442793-31442605 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 141 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 107, 135 |
| Conread position: | 263-452 |
| Cow position: | chrX:37072425-37072622 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 149 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 100, 145 |
| Conread position: | 263-453 |
| Cow position: | chrX:20584364-20584551 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 161 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 110, 0 |
| Conread position: | 263-453 |
| Cow position: | chrX:35224332-35224515 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 136 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 88, 0 |
| Conread position: | 263-454 |
| Cow position: | chrX:34792275-34792085 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 153 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 113, 49 |
| Conread position: | 263-456 |
| Cow position: | chrX:5487896-5487706 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 147 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 116, 18 |
| Conread position: | 263-456 |
| Cow position: | chrX:11656117-11656322 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 162 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 104, 142 |
| Conread position: | 263-459 |
| Cow position: | chrX:16984677-16984882 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 160 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 113, 75 |
| Conread position: | 263-460 |
| Cow position: | chrX:1088104-1087902 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 150 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 104, 24 |
| Conread position: | 263-461 |
| Cow position: | chrX:4152995-4152797 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 158 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 78, 84 |
| Conread position: | 263-463 |
| Cow position: | chrX:32866911-32867120 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 157 |
| Alignm E-value: | 7e-32 |
| Alignm gaps (pig, cow): | 104, 140 |
| Conread position: | 263-463 |
| Cow position: | chrX:42479869-42480075 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 161 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 104, 142 |
| Conread position: | 263-465 |
| Cow position: | chrX:2935993-2936201 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 158 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 100, 141 |
| Conread position: | 263-466 |
| Cow position: | chrX:32943040-32942828 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 154 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 120, 0 |
| Conread position: | 263-467 |
| Cow position: | chrX:34837028-34836819 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 158 |
| Alignm E-value: | 7e-33 |
| Alignm gaps (pig, cow): | 97, 138 |
| Conread position: | 263-469 |
| Cow position: | chrX:16836250-16836041 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 161 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 101, 33 |
| Conread position: | 263-469 |
| Cow position: | chrX:46072781-46072573 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 150 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 106, 135 |
| Conread position: | 263-471 |
| Cow position: | chrX:31436510-31436726 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 163 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 100, 140 |
| Conread position: | 264-415 |
| Cow position: | chrX:41939860-41940014 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 113 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 104, 0 |
| Conread position: | 266-366 |
| Cow position: | chrX:29601789-29601689 (view UCSC Genome Browser custom track) |
| Alignm length: | 101 |
| Alignm identity: | 82 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 266-430 |
| Cow position: | chrX:45383006-45382845 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 124 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 27, 0 |
| Conread position: | 266-447 |
| Cow position: | chrX:3806721-3806912 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 143 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 101, 143 |
| Conread position: | 266-451 |
| Cow position: | chrX:38964147-38964334 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 148 |
| Alignm E-value: | 9e-35 |
| Alignm gaps (pig, cow): | 86, 82 |
| Conread position: | 266-452 |
| Cow position: | chrX:2551130-2551314 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 140 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 37, 128 |
| Conread position: | 266-453 |
| Cow position: | chrX:19018792-19018589 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 150 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 101, 141 |
| Conread position: | 266-459 |
| Cow position: | chrX:42331323-42331518 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 148 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 100, 139 |
| Conread position: | 266-461 |
| Cow position: | chrX:20340604-20340411 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 142 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 127, 0 |
| Conread position: | 266-461 |
| Cow position: | chrX:33539209-33539399 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 143 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 173, 125 |
| Conread position: | 266-464 |
| Cow position: | chrX:27270414-27270618 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 143 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 56, 185 |
| Conread position: | 266-465 |
| Cow position: | chrX:46909854-46910060 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 147 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 107, 151 |
| Conread position: | 266-472 |
| Cow position: | chrX:20887602-20887390 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 154 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 76, 138 |
| Conread position: | 267-452 |
| Cow position: | chrX:24054717-24054899 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 148 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 101, 0 |
| Conread position: | 267-458 |
| Cow position: | chrX:2523642-2523456 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 147 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 102, 0 |
| Conread position: | 267-466 |
| Cow position: | chrX:27446726-27446935 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 148 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 109, 0 |
| Conread position: | 267-469 |
| Cow position: | chrX:39180193-39179989 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 143 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 103, 61 |
| Conread position: | 267-472 |
| Cow position: | chrX:39352826-39353028 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 155 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 97, 33 |
| Conread position: | 268-374 |
| Cow position: | chrX:31983544-31983438 (view UCSC Genome Browser custom track) |
| Alignm length: | 107 |
| Alignm identity: | 88 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 270-442 |
| Cow position: | chrX:11762958-11762783 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 131 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 87, 128 |
| Conread position: | 270-455 |
| Cow position: | chrX:11938890-11938712 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 133 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 81, 0 |
| Conread position: | 270-469 |
| Cow position: | chrX:35885684-35885476 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 151 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 100, 131 |
| Conread position: | 271-463 |
| Cow position: | chrX:20666857-20666654 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 152 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 48, 141 |
| Conread position: | 274-472 |
| Cow position: | chrX:34505002-34504797 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 160 |
| Alignm E-value: | 7e-32 |
| Alignm gaps (pig, cow): | 37, 70 |
| Conread position: | 281-443 |
| Cow position: | chrX:31827790-31827626 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 121 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 106, 134 |
| Conread position: | 281-469 |
| Cow position: | chrX:33000959-33001155 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 141 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 69, 120 |
| Conread position: | 283-428 |
| Cow position: | chrX:37119649-37119789 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 110 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 70, 0 |
| Conread position: | 283-438 |
| Cow position: | chrX:1499721-1499878 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 120 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 53, 119 |
| Conread position: | 283-438 |
| Cow position: | chrX:14973690-14973533 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 122 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 81, 119 |
| Conread position: | 283-442 |
| Cow position: | chrX:25925586-25925428 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 121 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 91, 112 |
| Conread position: | 283-469 |
| Cow position: | chrX:38218770-38218969 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 152 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 46, 129 |
| Conread position: | 284-438 |
| Cow position: | chrX:40567678-40567829 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 119 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 84, 0 |
| Conread position: | 284-449 |
| Cow position: | chrX:23497634-23497462 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 135 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 83, 67 |
| Conread position: | 284-452 |
| Cow position: | chrX:17525810-17525639 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 136 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 83, 117 |
| Conread position: | 284-452 |
| Cow position: | chrX:17662542-17662385 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 125 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 15, 84 |
| Conread position: | 284-455 |
| Cow position: | chrX:18812166-18812337 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 129 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 90, 116 |
| Conread position: | 284-463 |
| Cow position: | chrX:20881886-20881711 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 129 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 150, 21 |
| Conread position: | 284-464 |
| Cow position: | chrX:4269007-4268820 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 135 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 73, 118 |
| Conread position: | 284-466 |
| Cow position: | chrX:32747789-32747973 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 140 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 82, 117 |
| Conread position: | 284-470 |
| Cow position: | chrX:12807-12998 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 142 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 84, 40 |
| Conread position: | 285-438 |
| Cow position: | chrX:30420894-30420743 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 115 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 113, 0 |
| Conread position: | 286-432 |
| Cow position: | chrX:20151915-20152066 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 120 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 74, 114 |
| Conread position: | 286-451 |
| Cow position: | chrX:45648940-45649108 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 124 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 11, 111 |
| Conread position: | 286-469 |
| Cow position: | chrX:14135737-14135932 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 150 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 56, 60 |
| Conread position: | 286-472 |
| Cow position: | chrX:7722047-7722233 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 138 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 71, 102 |
| Conread position: | 288-443 |
| Cow position: | chrX:29682050-29681889 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 125 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 82, 60 |
| Conread position: | 288-459 |
| Cow position: | chrX:4750271-4750093 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 135 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 57, 116 |
| Conread position: | 290-446 |
| Cow position: | chrX:1102080-1102246 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 124 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 107, 0 |
| Conread position: | 290-446 |
| Cow position: | chrX:25232060-25232214 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 122 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 108, 0 |
| Conread position: | 290-462 |
| Cow position: | chrX:40556396-40556215 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 134 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 57, 0 |
| Conread position: | 290-463 |
| Cow position: | chrX:11529406-11529588 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 137 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 78, 113 |
| Conread position: | 290-463 |
| Cow position: | chrX:23088915-23089081 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 125 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 100, 0 |
| Conread position: | 292-438 |
| Cow position: | chrX:40263746-40263892 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 114 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 106, 71 |
| Conread position: | 298-436 |
| Cow position: | chrX:25420402-25420546 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 113 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 76, 99 |
| Conread position: | 298-472 |
| Cow position: | chrX:14900431-14900251 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 135 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 68, 101 |
| Conread position: | 301-447 |
| Cow position: | chrX:47248706-47248564 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 113 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 21, 65 |
| Conread position: | 301-465 |
| Cow position: | chrX:43059177-43059002 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 130 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 302-454 |
| Cow position: | chrX:35029851-35029697 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 122 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 64, 97 |
| Conread position: | 327-460 |
| Cow position: | chrX:13892917-13893052 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 105 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 43, 82 |
Show alignments to all cow chromosomes.