Cow genome map

Conread name: rcki31_k1.y1

Conread position: 341-525
Cow position: chr10:10720827-10720640 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 136
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 66, 0

Conread position: 341-525
Cow position: chr10:15309551-15309370 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 136
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 96, 61

Conread position: 344-525
Cow position: chr10:31779423-31779236 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 133
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 18, 0

Conread position: 345-525
Cow position: chr10:16645339-16645154 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 129
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 61, 0

Conread position: 345-525
Cow position: chr10:16986179-16986364 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 137
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 17, 0

Conread position: 347-482
Cow position: chr10:64878137-64877999 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 109
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 59, 46

Conread position: 349-459
Cow position: chr10:25882276-25882384 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 92
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 90, 53

Conread position: 349-462
Cow position: chr10:24871742-24871860 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 95
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 57, 0

Conread position: 349-472
Cow position: chr10:24276879-24276752 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 99
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 50, 0

Conread position: 349-496
Cow position: chr10:4164121-4164273 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 116
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 56, 0

Conread position: 349-499
Cow position: chr10:48462485-48462334 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 116
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 13, 92

Conread position: 349-511
Cow position: chr10:6173211-6173376 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 120
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 16, 0

Conread position: 349-515
Cow position: chr10:33733014-33732844 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 124
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 58, 0

Conread position: 349-523
Cow position: chr10:35857201-35857031 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 127
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 57, 84

Conread position: 349-525
Cow position: chr10:3998757-3998938 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 129
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 55, 0

Conread position: 349-525
Cow position: chr10:6543576-6543758 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 129
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 61, 0

Conread position: 349-525
Cow position: chr10:12486117-12486296 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 134
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 58, 72

Conread position: 349-525
Cow position: chr10:17844622-17844799 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 128
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 89, 18

Conread position: 349-525
Cow position: chr10:19372484-19372304 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 133
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 50, 0

Conread position: 349-525
Cow position: chr10:28105229-28105047 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 130
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 57, 0

Conread position: 349-525
Cow position: chr10:32029979-32029800 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 124
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 60, 0

Conread position: 349-525
Cow position: chr10:36002052-36002230 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 129
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 89, 155

Conread position: 349-525
Cow position: chr10:47412251-47412074 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 133
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 57, 152

Conread position: 349-525
Cow position: chr10:54848630-54848810 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 135
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 50, 157

Conread position: 349-525
Cow position: chr10:62286406-62286589 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 135
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 45, 0

Conread position: 349-525
Cow position: chr10:65424045-65423871 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 126
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 57, 88

Conread position: 350-525
Cow position: chr10:58935311-58935136 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 133
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 59, 12

Conread position: 351-521
Cow position: chr10:32834680-32834851 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 131
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 56, 11

Conread position: 351-525
Cow position: chr10:2849212-2849381 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 130
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 91, 47

Conread position: 351-525
Cow position: chr10:10468837-10469012 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 133
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 55, 68

Conread position: 353-525
Cow position: chr10:6663883-6664066 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 135
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 7, 0

Conread position: 353-525
Cow position: chr10:29102476-29102313 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 125
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 70, 0

Conread position: 355-525
Cow position: chr10:533389-533564 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 128
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 51, 0

Conread position: 356-472
Cow position: chr10:37528744-37528625 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 99
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 50, 0

Conread position: 356-481
Cow position: chr10:44764643-44764519 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 100
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 89, 50

Conread position: 356-482
Cow position: chr10:37709174-37709042 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 104
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 50, 0

Conread position: 356-484
Cow position: chr10:50200575-50200703 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 103
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 50, 86

Conread position: 356-495
Cow position: chr10:12315017-12315159 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 108
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 50, 0

Conread position: 356-496
Cow position: chr10:24732174-24732311 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 105
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 46, 0

Conread position: 356-499
Cow position: chr10:43508852-43508997 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 111
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 53, 84

Conread position: 356-501
Cow position: chr10:37442166-37442316 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 114
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 49, 0

Conread position: 356-501
Cow position: chr10:37444359-37444209 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 114
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 49, 0

Conread position: 356-509
Cow position: chr10:52113810-52113653 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 120
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 50, 118

Conread position: 356-511
Cow position: chr10:20372265-20372106 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 120
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 50, 0

Conread position: 356-513
Cow position: chr10:60237230-60237073 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 117
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 78, 45

Conread position: 356-519
Cow position: chr10:24871026-24871191 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 119
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 51, 0

Conread position: 356-519
Cow position: chr10:35862364-35862201 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 122
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 50, 92

Conread position: 356-521
Cow position: chr10:2202263-2202092 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 125
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 51, 0

Conread position: 356-521
Cow position: chr10:11009277-11009438 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 126
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 51, 35

Conread position: 356-521
Cow position: chr10:25699512-25699678 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 118
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 9, 0

Conread position: 356-521
Cow position: chr10:59010277-59010107 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 125
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 8, 0

Conread position: 356-521
Cow position: chr10:64041944-64042113 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 124
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 7, 0

Conread position: 356-524
Cow position: chr10:4184053-4184227 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 127
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 50, 0

Conread position: 356-524
Cow position: chr10:20132665-20132497 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 123
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 53, 88

Conread position: 356-524
Cow position: chr10:31791397-31791228 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 124
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 51, 69

Conread position: 356-524
Cow position: chr10:59664117-59663940 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 128
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 10, 0

Conread position: 356-524
Cow position: chr10:63276253-63276425 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 123
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 50, 0

Conread position: 356-525
Cow position: chr10:11221566-11221735 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 125
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 91, 51

Conread position: 356-525
Cow position: chr10:12392746-12392574 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 125
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 83, 8

Conread position: 356-525
Cow position: chr10:15293136-15293298 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 125
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 37, 21

Conread position: 356-525
Cow position: chr10:19549626-19549455 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 121
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 51, 0

Conread position: 356-525
Cow position: chr10:24561126-24560955 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 120
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 53, 0

Conread position: 356-525
Cow position: chr10:34607420-34607594 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 124
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 50, 0

Conread position: 356-525
Cow position: chr10:39303990-39303814 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 130
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 50, 0

Conread position: 356-525
Cow position: chr10:40106965-40107134 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 123
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 51, 150

Conread position: 356-525
Cow position: chr10:41254709-41254541 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 132
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 51, 65

Conread position: 356-525
Cow position: chr10:43438735-43438907 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 123
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 50, 120

Conread position: 356-525
Cow position: chr10:45379143-45378972 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 119
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 50, 0

Conread position: 356-525
Cow position: chr10:46493137-46492962 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 131
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 48, 0

Conread position: 356-525
Cow position: chr10:52046724-52046903 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 130
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 50, 0

Conread position: 356-525
Cow position: chr10:54476967-54477135 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 133
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 51, 85

Conread position: 356-525
Cow position: chr10:59588306-59588144 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 127
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 98, 27

Conread position: 356-525
Cow position: chr10:60960801-60960967 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 123
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 46, 0

Conread position: 356-525
Cow position: chr10:65071173-65071344 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 121
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 51, 0

Conread position: 357-476
Cow position: chr10:17983047-17983167 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 97
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 49, 86

Conread position: 357-525
Cow position: chr10:13315803-13315971 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 124
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 79, 45

Conread position: 358-499
Cow position: chr10:21462101-21462253 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 117
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 48, 0

Conread position: 358-525
Cow position: chr10:6768846-6768678 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 124
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 51, 147

Conread position: 358-525
Cow position: chr10:29588972-29588807 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 121
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 81, 44

Conread position: 358-525
Cow position: chr10:52881757-52881586 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 125
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 48, 0

Conread position: 361-521
Cow position: chr10:13586574-13586732 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 118
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 45, 58

Conread position: 361-525
Cow position: chr10:23576409-23576579 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 124
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 45, 0

Conread position: 361-525
Cow position: chr10:23936350-23936509 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 120
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 70, 0

Conread position: 364-525
Cow position: chr10:24132951-24132791 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 122
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 42, 137

Conread position: 365-496
Cow position: chr10:2537965-2538099 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 102
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 42, 0

Conread position: 368-472
Cow position: chr10:1976444-1976334 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 94
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 27, 0

Conread position: 368-525
Cow position: chr10:31005146-31004984 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 123
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 38, 130

Conread position: 371-521
Cow position: chr10:34897861-34898007 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 110
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 49, 0

Conread position: 374-525
Cow position: chr10:15868128-15868284 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 121
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 31, 0

Conread position: 375-525
Cow position: chr10:34660362-34660210 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 114
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 37, 0

Conread position: 376-521
Cow position: chr10:42312784-42312932 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 109
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 31, 0

Conread position: 382-525
Cow position: chr10:67581169-67581317 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 111
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 29, 0

Show alignments to all cow chromosomes.