Cow genome map
Conread name: | rcki31_k1.y1 |
Conread position: | 340-525 |
Cow position: | chr13:620144-620320 (view UCSC Genome Browser custom track) |
Alignm length: | 189 |
Alignm identity: | 138 |
Alignm E-value: | 1e-22 |
Alignm gaps (pig, cow): | 100, 59 |
Conread position: | 341-525 |
Cow position: | chr13:3989319-3989126 (view UCSC Genome Browser custom track) |
Alignm length: | 194 |
Alignm identity: | 139 |
Alignm E-value: | 1e-24 |
Alignm gaps (pig, cow): | 66, 0 |
Conread position: | 342-524 |
Cow position: | chr13:15621929-15621740 (view UCSC Genome Browser custom track) |
Alignm length: | 191 |
Alignm identity: | 134 |
Alignm E-value: | 3e-21 |
Alignm gaps (pig, cow): | 67, 152 |
Conread position: | 345-525 |
Cow position: | chr13:46736324-46736144 (view UCSC Genome Browser custom track) |
Alignm length: | 184 |
Alignm identity: | 132 |
Alignm E-value: | 4e-24 |
Alignm gaps (pig, cow): | 59, 98 |
Conread position: | 346-524 |
Cow position: | chr13:13297785-13297602 (view UCSC Genome Browser custom track) |
Alignm length: | 185 |
Alignm identity: | 131 |
Alignm E-value: | 1e-22 |
Alignm gaps (pig, cow): | 65, 39 |
Conread position: | 347-490 |
Cow position: | chr13:61170611-61170754 (view UCSC Genome Browser custom track) |
Alignm length: | 146 |
Alignm identity: | 109 |
Alignm E-value: | 1e-21 |
Alignm gaps (pig, cow): | 58, 98 |
Conread position: | 348-472 |
Cow position: | chr13:20041859-20041988 (view UCSC Genome Browser custom track) |
Alignm length: | 130 |
Alignm identity: | 102 |
Alignm E-value: | 3e-22 |
Alignm gaps (pig, cow): | 57, 0 |
Conread position: | 348-479 |
Cow position: | chr13:6113196-6113329 (view UCSC Genome Browser custom track) |
Alignm length: | 134 |
Alignm identity: | 106 |
Alignm E-value: | 5e-26 |
Alignm gaps (pig, cow): | 60, 0 |
Conread position: | 348-520 |
Cow position: | chr13:2463124-2463301 (view UCSC Genome Browser custom track) |
Alignm length: | 178 |
Alignm identity: | 130 |
Alignm E-value: | 1e-25 |
Alignm gaps (pig, cow): | 60, 0 |
Conread position: | 348-525 |
Cow position: | chr13:25435011-25435194 (view UCSC Genome Browser custom track) |
Alignm length: | 184 |
Alignm identity: | 130 |
Alignm E-value: | 1e-22 |
Alignm gaps (pig, cow): | 59, 0 |
Conread position: | 349-499 |
Cow position: | chr13:10988967-10989119 (view UCSC Genome Browser custom track) |
Alignm length: | 155 |
Alignm identity: | 115 |
Alignm E-value: | 1e-21 |
Alignm gaps (pig, cow): | 16, 94 |
Conread position: | 349-518 |
Cow position: | chr13:7663316-7663486 (view UCSC Genome Browser custom track) |
Alignm length: | 171 |
Alignm identity: | 118 |
Alignm E-value: | 9e-21 |
Alignm gaps (pig, cow): | 100, 0 |
Conread position: | 349-520 |
Cow position: | chr13:25531680-25531856 (view UCSC Genome Browser custom track) |
Alignm length: | 179 |
Alignm identity: | 128 |
Alignm E-value: | 3e-21 |
Alignm gaps (pig, cow): | 55, 143 |
Conread position: | 349-520 |
Cow position: | chr13:28683470-28683296 (view UCSC Genome Browser custom track) |
Alignm length: | 176 |
Alignm identity: | 126 |
Alignm E-value: | 1e-22 |
Alignm gaps (pig, cow): | 93, 145 |
Conread position: | 349-521 |
Cow position: | chr13:43762277-43762101 (view UCSC Genome Browser custom track) |
Alignm length: | 177 |
Alignm identity: | 127 |
Alignm E-value: | 4e-24 |
Alignm gaps (pig, cow): | 53, 0 |
Conread position: | 349-524 |
Cow position: | chr13:17158766-17158948 (view UCSC Genome Browser custom track) |
Alignm length: | 183 |
Alignm identity: | 132 |
Alignm E-value: | 1e-23 |
Alignm gaps (pig, cow): | 22, 0 |
Conread position: | 349-525 |
Cow position: | chr13:6060902-6061079 (view UCSC Genome Browser custom track) |
Alignm length: | 179 |
Alignm identity: | 128 |
Alignm E-value: | 4e-25 |
Alignm gaps (pig, cow): | 95, 63 |
Conread position: | 349-525 |
Cow position: | chr13:9593616-9593434 (view UCSC Genome Browser custom track) |
Alignm length: | 183 |
Alignm identity: | 132 |
Alignm E-value: | 4e-25 |
Alignm gaps (pig, cow): | 56, 0 |
Conread position: | 349-525 |
Cow position: | chr13:13176759-13176579 (view UCSC Genome Browser custom track) |
Alignm length: | 181 |
Alignm identity: | 126 |
Alignm E-value: | 3e-21 |
Alignm gaps (pig, cow): | 48, 0 |
Conread position: | 349-525 |
Cow position: | chr13:14576314-14576142 (view UCSC Genome Browser custom track) |
Alignm length: | 179 |
Alignm identity: | 128 |
Alignm E-value: | 3e-21 |
Alignm gaps (pig, cow): | 53, 72 |
Conread position: | 349-525 |
Cow position: | chr13:18166841-18166661 (view UCSC Genome Browser custom track) |
Alignm length: | 181 |
Alignm identity: | 131 |
Alignm E-value: | 5e-26 |
Alignm gaps (pig, cow): | 68, 0 |
Conread position: | 349-525 |
Cow position: | chr13:42200726-42200548 (view UCSC Genome Browser custom track) |
Alignm length: | 180 |
Alignm identity: | 125 |
Alignm E-value: | 9e-21 |
Alignm gaps (pig, cow): | 65, 43 |
Conread position: | 349-525 |
Cow position: | chr13:51940844-51940663 (view UCSC Genome Browser custom track) |
Alignm length: | 182 |
Alignm identity: | 131 |
Alignm E-value: | 4e-25 |
Alignm gaps (pig, cow): | 57, 0 |
Conread position: | 350-525 |
Cow position: | chr13:37592836-37593017 (view UCSC Genome Browser custom track) |
Alignm length: | 182 |
Alignm identity: | 139 |
Alignm E-value: | 3e-32 |
Alignm gaps (pig, cow): | 55, 0 |
Conread position: | 351-525 |
Cow position: | chr13:39368059-39367888 (view UCSC Genome Browser custom track) |
Alignm length: | 180 |
Alignm identity: | 134 |
Alignm E-value: | 1e-23 |
Alignm gaps (pig, cow): | 55, 34 |
Conread position: | 352-493 |
Cow position: | chr13:16711731-16711588 (view UCSC Genome Browser custom track) |
Alignm length: | 145 |
Alignm identity: | 112 |
Alignm E-value: | 4e-25 |
Alignm gaps (pig, cow): | 55, 100 |
Conread position: | 353-503 |
Cow position: | chr13:10845699-10845547 (view UCSC Genome Browser custom track) |
Alignm length: | 154 |
Alignm identity: | 112 |
Alignm E-value: | 9e-21 |
Alignm gaps (pig, cow): | 53, 84 |
Conread position: | 354-525 |
Cow position: | chr13:49022770-49022939 (view UCSC Genome Browser custom track) |
Alignm length: | 176 |
Alignm identity: | 132 |
Alignm E-value: | 1e-25 |
Alignm gaps (pig, cow): | 6, 32 |
Conread position: | 356-462 |
Cow position: | chr13:37517036-37517145 (view UCSC Genome Browser custom track) |
Alignm length: | 110 |
Alignm identity: | 90 |
Alignm E-value: | 1e-21 |
Alignm gaps (pig, cow): | 49, 0 |
Conread position: | 356-466 |
Cow position: | chr13:55947873-55947761 (view UCSC Genome Browser custom track) |
Alignm length: | 114 |
Alignm identity: | 92 |
Alignm E-value: | 9e-21 |
Alignm gaps (pig, cow): | 51, 93 |
Conread position: | 356-487 |
Cow position: | chr13:45725996-45725862 (view UCSC Genome Browser custom track) |
Alignm length: | 135 |
Alignm identity: | 108 |
Alignm E-value: | 6e-27 |
Alignm gaps (pig, cow): | 48, 0 |
Conread position: | 356-496 |
Cow position: | chr13:19178375-19178230 (view UCSC Genome Browser custom track) |
Alignm length: | 146 |
Alignm identity: | 109 |
Alignm E-value: | 3e-21 |
Alignm gaps (pig, cow): | 50, 0 |
Conread position: | 356-496 |
Cow position: | chr13:61990236-61990377 (view UCSC Genome Browser custom track) |
Alignm length: | 143 |
Alignm identity: | 110 |
Alignm E-value: | 4e-25 |
Alignm gaps (pig, cow): | 50, 87 |
Conread position: | 356-518 |
Cow position: | chr13:16024691-16024525 (view UCSC Genome Browser custom track) |
Alignm length: | 167 |
Alignm identity: | 127 |
Alignm E-value: | 7e-29 |
Alignm gaps (pig, cow): | 50, 0 |
Conread position: | 356-521 |
Cow position: | chr13:15192789-15192953 (view UCSC Genome Browser custom track) |
Alignm length: | 169 |
Alignm identity: | 127 |
Alignm E-value: | 5e-26 |
Alignm gaps (pig, cow): | 50, 84 |
Conread position: | 356-521 |
Cow position: | chr13:29831336-29831498 (view UCSC Genome Browser custom track) |
Alignm length: | 168 |
Alignm identity: | 125 |
Alignm E-value: | 1e-24 |
Alignm gaps (pig, cow): | 51, 87 |
Conread position: | 356-521 |
Cow position: | chr13:46181892-46181725 (view UCSC Genome Browser custom track) |
Alignm length: | 169 |
Alignm identity: | 124 |
Alignm E-value: | 4e-25 |
Alignm gaps (pig, cow): | 55, 86 |
Conread position: | 356-524 |
Cow position: | chr13:24753981-24753817 (view UCSC Genome Browser custom track) |
Alignm length: | 169 |
Alignm identity: | 127 |
Alignm E-value: | 2e-28 |
Alignm gaps (pig, cow): | 86, 0 |
Conread position: | 356-524 |
Cow position: | chr13:53070070-53070230 (view UCSC Genome Browser custom track) |
Alignm length: | 171 |
Alignm identity: | 129 |
Alignm E-value: | 1e-23 |
Alignm gaps (pig, cow): | 49, 84 |
Conread position: | 356-525 |
Cow position: | chr13:1042865-1043040 (view UCSC Genome Browser custom track) |
Alignm length: | 176 |
Alignm identity: | 131 |
Alignm E-value: | 6e-27 |
Alignm gaps (pig, cow): | 51, 0 |
Conread position: | 356-525 |
Cow position: | chr13:2414129-2413958 (view UCSC Genome Browser custom track) |
Alignm length: | 173 |
Alignm identity: | 128 |
Alignm E-value: | 6e-27 |
Alignm gaps (pig, cow): | 56, 95 |
Conread position: | 356-525 |
Cow position: | chr13:5758240-5758413 (view UCSC Genome Browser custom track) |
Alignm length: | 175 |
Alignm identity: | 129 |
Alignm E-value: | 1e-25 |
Alignm gaps (pig, cow): | 50, 74 |
Conread position: | 356-525 |
Cow position: | chr13:6974261-6974090 (view UCSC Genome Browser custom track) |
Alignm length: | 172 |
Alignm identity: | 128 |
Alignm E-value: | 2e-29 |
Alignm gaps (pig, cow): | 53, 0 |
Conread position: | 356-525 |
Cow position: | chr13:8201383-8201554 (view UCSC Genome Browser custom track) |
Alignm length: | 174 |
Alignm identity: | 130 |
Alignm E-value: | 2e-26 |
Alignm gaps (pig, cow): | 9, 80 |
Conread position: | 356-525 |
Cow position: | chr13:8652338-8652513 (view UCSC Genome Browser custom track) |
Alignm length: | 176 |
Alignm identity: | 126 |
Alignm E-value: | 3e-22 |
Alignm gaps (pig, cow): | 49, 0 |
Conread position: | 356-525 |
Cow position: | chr13:9643787-9643958 (view UCSC Genome Browser custom track) |
Alignm length: | 173 |
Alignm identity: | 124 |
Alignm E-value: | 4e-23 |
Alignm gaps (pig, cow): | 43, 85 |
Conread position: | 356-525 |
Cow position: | chr13:11061086-11060917 (view UCSC Genome Browser custom track) |
Alignm length: | 174 |
Alignm identity: | 125 |
Alignm E-value: | 3e-21 |
Alignm gaps (pig, cow): | 51, 70 |
Conread position: | 356-525 |
Cow position: | chr13:15991130-15991301 (view UCSC Genome Browser custom track) |
Alignm length: | 174 |
Alignm identity: | 127 |
Alignm E-value: | 4e-24 |
Alignm gaps (pig, cow): | 51, 124 |
Conread position: | 356-525 |
Cow position: | chr13:16014910-16014740 (view UCSC Genome Browser custom track) |
Alignm length: | 174 |
Alignm identity: | 128 |
Alignm E-value: | 1e-24 |
Alignm gaps (pig, cow): | 93, 61 |
Conread position: | 356-525 |
Cow position: | chr13:17855473-17855301 (view UCSC Genome Browser custom track) |
Alignm length: | 174 |
Alignm identity: | 124 |
Alignm E-value: | 1e-21 |
Alignm gaps (pig, cow): | 50, 20 |
Conread position: | 356-525 |
Cow position: | chr13:18243962-18243791 (view UCSC Genome Browser custom track) |
Alignm length: | 172 |
Alignm identity: | 126 |
Alignm E-value: | 2e-27 |
Alignm gaps (pig, cow): | 51, 0 |
Conread position: | 356-525 |
Cow position: | chr13:20649883-20650057 (view UCSC Genome Browser custom track) |
Alignm length: | 175 |
Alignm identity: | 133 |
Alignm E-value: | 3e-30 |
Alignm gaps (pig, cow): | 50, 0 |
Conread position: | 356-525 |
Cow position: | chr13:36771319-36771493 (view UCSC Genome Browser custom track) |
Alignm length: | 177 |
Alignm identity: | 132 |
Alignm E-value: | 5e-26 |
Alignm gaps (pig, cow): | 53, 131 |
Conread position: | 356-525 |
Cow position: | chr13:52749378-52749541 (view UCSC Genome Browser custom track) |
Alignm length: | 172 |
Alignm identity: | 125 |
Alignm E-value: | 9e-21 |
Alignm gaps (pig, cow): | 51, 37 |
Conread position: | 356-525 |
Cow position: | chr13:55728002-55727831 (view UCSC Genome Browser custom track) |
Alignm length: | 174 |
Alignm identity: | 127 |
Alignm E-value: | 4e-24 |
Alignm gaps (pig, cow): | 9, 76 |
Conread position: | 357-525 |
Cow position: | chr13:17613443-17613269 (view UCSC Genome Browser custom track) |
Alignm length: | 176 |
Alignm identity: | 127 |
Alignm E-value: | 1e-21 |
Alignm gaps (pig, cow): | 49, 73 |
Conread position: | 364-484 |
Cow position: | chr13:54093837-54093715 (view UCSC Genome Browser custom track) |
Alignm length: | 123 |
Alignm identity: | 96 |
Alignm E-value: | 3e-22 |
Alignm gaps (pig, cow): | 42, 0 |
Conread position: | 364-520 |
Cow position: | chr13:9587496-9587655 (view UCSC Genome Browser custom track) |
Alignm length: | 160 |
Alignm identity: | 114 |
Alignm E-value: | 3e-21 |
Alignm gaps (pig, cow): | 84, 0 |
Conread position: | 364-525 |
Cow position: | chr13:6153690-6153855 (view UCSC Genome Browser custom track) |
Alignm length: | 166 |
Alignm identity: | 121 |
Alignm E-value: | 4e-24 |
Alignm gaps (pig, cow): | 43, 0 |
Conread position: | 364-525 |
Cow position: | chr13:18995220-18995055 (view UCSC Genome Browser custom track) |
Alignm length: | 170 |
Alignm identity: | 126 |
Alignm E-value: | 3e-21 |
Alignm gaps (pig, cow): | 29, 147 |
Conread position: | 364-525 |
Cow position: | chr13:19188393-19188230 (view UCSC Genome Browser custom track) |
Alignm length: | 164 |
Alignm identity: | 117 |
Alignm E-value: | 1e-22 |
Alignm gaps (pig, cow): | 43, 0 |
Conread position: | 364-525 |
Cow position: | chr13:23270119-23270276 (view UCSC Genome Browser custom track) |
Alignm length: | 164 |
Alignm identity: | 120 |
Alignm E-value: | 3e-21 |
Alignm gaps (pig, cow): | 42, 58 |
Conread position: | 365-525 |
Cow position: | chr13:16187806-16187967 (view UCSC Genome Browser custom track) |
Alignm length: | 163 |
Alignm identity: | 123 |
Alignm E-value: | 6e-28 |
Alignm gaps (pig, cow): | 42, 8 |
Conread position: | 367-525 |
Cow position: | chr13:8524525-8524689 (view UCSC Genome Browser custom track) |
Alignm length: | 165 |
Alignm identity: | 122 |
Alignm E-value: | 1e-23 |
Alignm gaps (pig, cow): | 5, 0 |
Conread position: | 368-521 |
Cow position: | chr13:17622370-17622221 (view UCSC Genome Browser custom track) |
Alignm length: | 154 |
Alignm identity: | 115 |
Alignm E-value: | 4e-24 |
Alignm gaps (pig, cow): | 44, 0 |
Conread position: | 368-525 |
Cow position: | chr13:3211640-3211478 (view UCSC Genome Browser custom track) |
Alignm length: | 163 |
Alignm identity: | 117 |
Alignm E-value: | 9e-21 |
Alignm gaps (pig, cow): | 39, 0 |
Conread position: | 372-525 |
Cow position: | chr13:20137909-20137750 (view UCSC Genome Browser custom track) |
Alignm length: | 160 |
Alignm identity: | 121 |
Alignm E-value: | 1e-24 |
Alignm gaps (pig, cow): | 35, 0 |
Conread position: | 389-525 |
Cow position: | chr13:17563804-17563668 (view UCSC Genome Browser custom track) |
Alignm length: | 139 |
Alignm identity: | 106 |
Alignm E-value: | 1e-22 |
Alignm gaps (pig, cow): | 17, 61 |
Show alignments to all cow chromosomes.