Cow genome map

Conread name: rcki31_k1.y1

Conread position: 340-525
Cow position: chr13:620144-620320 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 138
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 100, 59

Conread position: 341-525
Cow position: chr13:3989319-3989126 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 139
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 66, 0

Conread position: 342-524
Cow position: chr13:15621929-15621740 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 134
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 67, 152

Conread position: 345-525
Cow position: chr13:46736324-46736144 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 132
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 59, 98

Conread position: 346-524
Cow position: chr13:13297785-13297602 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 131
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 65, 39

Conread position: 347-490
Cow position: chr13:61170611-61170754 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 109
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 58, 98

Conread position: 348-472
Cow position: chr13:20041859-20041988 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 102
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 57, 0

Conread position: 348-479
Cow position: chr13:6113196-6113329 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 106
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 60, 0

Conread position: 348-520
Cow position: chr13:2463124-2463301 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 130
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 60, 0

Conread position: 348-525
Cow position: chr13:25435011-25435194 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 130
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 59, 0

Conread position: 349-499
Cow position: chr13:10988967-10989119 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 115
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 16, 94

Conread position: 349-518
Cow position: chr13:7663316-7663486 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 118
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 100, 0

Conread position: 349-520
Cow position: chr13:25531680-25531856 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 128
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 55, 143

Conread position: 349-520
Cow position: chr13:28683470-28683296 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 126
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 93, 145

Conread position: 349-521
Cow position: chr13:43762277-43762101 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 127
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 53, 0

Conread position: 349-524
Cow position: chr13:17158766-17158948 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 132
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 22, 0

Conread position: 349-525
Cow position: chr13:6060902-6061079 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 128
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 95, 63

Conread position: 349-525
Cow position: chr13:9593616-9593434 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 132
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 56, 0

Conread position: 349-525
Cow position: chr13:13176759-13176579 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 126
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 48, 0

Conread position: 349-525
Cow position: chr13:14576314-14576142 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 128
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 53, 72

Conread position: 349-525
Cow position: chr13:18166841-18166661 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 131
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 68, 0

Conread position: 349-525
Cow position: chr13:42200726-42200548 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 125
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 65, 43

Conread position: 349-525
Cow position: chr13:51940844-51940663 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 131
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 57, 0

Conread position: 350-525
Cow position: chr13:37592836-37593017 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 139
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 55, 0

Conread position: 351-525
Cow position: chr13:39368059-39367888 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 134
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 55, 34

Conread position: 352-493
Cow position: chr13:16711731-16711588 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 112
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 55, 100

Conread position: 353-503
Cow position: chr13:10845699-10845547 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 112
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 53, 84

Conread position: 354-525
Cow position: chr13:49022770-49022939 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 132
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 6, 32

Conread position: 356-462
Cow position: chr13:37517036-37517145 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 90
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 49, 0

Conread position: 356-466
Cow position: chr13:55947873-55947761 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 92
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 51, 93

Conread position: 356-487
Cow position: chr13:45725996-45725862 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 108
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 48, 0

Conread position: 356-496
Cow position: chr13:19178375-19178230 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 109
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 50, 0

Conread position: 356-496
Cow position: chr13:61990236-61990377 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 110
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 50, 87

Conread position: 356-518
Cow position: chr13:16024691-16024525 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 127
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 50, 0

Conread position: 356-521
Cow position: chr13:15192789-15192953 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 127
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 50, 84

Conread position: 356-521
Cow position: chr13:29831336-29831498 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 125
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 51, 87

Conread position: 356-521
Cow position: chr13:46181892-46181725 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 124
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 55, 86

Conread position: 356-524
Cow position: chr13:24753981-24753817 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 127
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 86, 0

Conread position: 356-524
Cow position: chr13:53070070-53070230 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 129
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 49, 84

Conread position: 356-525
Cow position: chr13:1042865-1043040 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 131
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 51, 0

Conread position: 356-525
Cow position: chr13:2414129-2413958 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 128
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 56, 95

Conread position: 356-525
Cow position: chr13:5758240-5758413 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 129
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 50, 74

Conread position: 356-525
Cow position: chr13:6974261-6974090 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 128
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 53, 0

Conread position: 356-525
Cow position: chr13:8201383-8201554 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 130
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 9, 80

Conread position: 356-525
Cow position: chr13:8652338-8652513 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 126
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 49, 0

Conread position: 356-525
Cow position: chr13:9643787-9643958 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 124
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 43, 85

Conread position: 356-525
Cow position: chr13:11061086-11060917 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 125
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 51, 70

Conread position: 356-525
Cow position: chr13:15991130-15991301 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 127
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 51, 124

Conread position: 356-525
Cow position: chr13:16014910-16014740 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 128
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 93, 61

Conread position: 356-525
Cow position: chr13:17855473-17855301 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 124
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 50, 20

Conread position: 356-525
Cow position: chr13:18243962-18243791 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 126
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 51, 0

Conread position: 356-525
Cow position: chr13:20649883-20650057 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 133
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 50, 0

Conread position: 356-525
Cow position: chr13:36771319-36771493 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 132
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 53, 131

Conread position: 356-525
Cow position: chr13:52749378-52749541 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 125
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 51, 37

Conread position: 356-525
Cow position: chr13:55728002-55727831 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 127
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 9, 76

Conread position: 357-525
Cow position: chr13:17613443-17613269 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 127
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 49, 73

Conread position: 364-484
Cow position: chr13:54093837-54093715 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 96
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 42, 0

Conread position: 364-520
Cow position: chr13:9587496-9587655 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 114
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 84, 0

Conread position: 364-525
Cow position: chr13:6153690-6153855 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 121
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 43, 0

Conread position: 364-525
Cow position: chr13:18995220-18995055 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 126
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 29, 147

Conread position: 364-525
Cow position: chr13:19188393-19188230 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 117
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 43, 0

Conread position: 364-525
Cow position: chr13:23270119-23270276 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 120
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 42, 58

Conread position: 365-525
Cow position: chr13:16187806-16187967 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 123
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 42, 8

Conread position: 367-525
Cow position: chr13:8524525-8524689 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 122
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 5, 0

Conread position: 368-521
Cow position: chr13:17622370-17622221 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 115
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 44, 0

Conread position: 368-525
Cow position: chr13:3211640-3211478 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 117
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 39, 0

Conread position: 372-525
Cow position: chr13:20137909-20137750 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 121
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 35, 0

Conread position: 389-525
Cow position: chr13:17563804-17563668 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 106
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 17, 61

Show alignments to all cow chromosomes.