Cow genome map

Conread name: rcki31_k1.y1

Conread position: 53-234
Cow position: chr16:33507779-33507961 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 148
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 48, 0

Conread position: 339-525
Cow position: chr16:13578992-13578804 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 137
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 67, 16

Conread position: 340-525
Cow position: chr16:18757972-18757782 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 145
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 22, 46

Conread position: 340-525
Cow position: chr16:56796797-56796609 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 140
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 64, 0

Conread position: 341-495
Cow position: chr16:30615110-30614953 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 115
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 63, 0

Conread position: 343-476
Cow position: chr16:4503153-4503290 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 106
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 19, 0

Conread position: 343-525
Cow position: chr16:22984629-22984810 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 131
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 64, 82

Conread position: 345-521
Cow position: chr16:14758607-14758788 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 136
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 61, 166

Conread position: 346-525
Cow position: chr16:29677756-29677577 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 126
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 59, 69

Conread position: 347-520
Cow position: chr16:12273944-12274122 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 126
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 59, 0

Conread position: 348-472
Cow position: chr16:23810789-23810915 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 99
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 58, 105

Conread position: 348-518
Cow position: chr16:23738055-23738231 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 125
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 11, 0

Conread position: 348-521
Cow position: chr16:48086991-48086815 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 133
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 59, 73

Conread position: 349-484
Cow position: chr16:39417240-39417104 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 108
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 56, 99

Conread position: 349-499
Cow position: chr16:49125651-49125498 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 115
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 57, 114

Conread position: 349-521
Cow position: chr16:14242249-14242422 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 129
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 57, 36

Conread position: 349-521
Cow position: chr16:21905043-21905215 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 131
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 56, 39

Conread position: 349-525
Cow position: chr16:8323105-8322925 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 129
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 58, 0

Conread position: 349-525
Cow position: chr16:11082886-11083055 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 127
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 43, 0

Conread position: 349-525
Cow position: chr16:13195464-13195282 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 128
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 58, 0

Conread position: 349-525
Cow position: chr16:13306986-13306815 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 133
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 53, 0

Conread position: 349-525
Cow position: chr16:20025324-20025498 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 129
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 58, 91

Conread position: 349-525
Cow position: chr16:35623364-35623193 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 133
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 63, 135

Conread position: 349-525
Cow position: chr16:42200775-42200956 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 128
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 9, 0

Conread position: 349-525
Cow position: chr16:42444033-42444213 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 127
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 60, 0

Conread position: 349-525
Cow position: chr16:42633873-42633687 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 137
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 55, 143

Conread position: 349-525
Cow position: chr16:49169508-49169324 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 133
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 32, 0

Conread position: 349-525
Cow position: chr16:53627550-53627371 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 126
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 57, 0

Conread position: 350-474
Cow position: chr16:14028749-14028623 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 98
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 15, 0

Conread position: 350-524
Cow position: chr16:47852714-47852537 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 128
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 54, 84

Conread position: 351-521
Cow position: chr16:25965383-25965552 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 132
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 42, 23

Conread position: 351-525
Cow position: chr16:2223522-2223340 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 136
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 61, 0

Conread position: 351-525
Cow position: chr16:4910647-4910468 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 126
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 55, 0

Conread position: 352-482
Cow position: chr16:26501036-26501172 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 106
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 10, 0

Conread position: 353-525
Cow position: chr16:43801037-43800860 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 132
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 53, 114

Conread position: 355-521
Cow position: chr16:51112993-51112827 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 121
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 52, 127

Conread position: 355-524
Cow position: chr16:35188138-35188309 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 130
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 52, 0

Conread position: 356-482
Cow position: chr16:9790746-9790617 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 101
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 51, 0

Conread position: 356-512
Cow position: chr16:3614630-3614790 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 120
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 51, 137

Conread position: 356-518
Cow position: chr16:11775164-11775002 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 119
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 50, 86

Conread position: 356-518
Cow position: chr16:30143320-30143156 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 125
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 51, 93

Conread position: 356-520
Cow position: chr16:43308677-43308509 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 130
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 53, 125

Conread position: 356-521
Cow position: chr16:42340080-42340249 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 136
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 6, 37

Conread position: 356-521
Cow position: chr16:42734130-42733958 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 127
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 50, 24

Conread position: 356-521
Cow position: chr16:54664915-54664748 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 127
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 51, 13

Conread position: 356-523
Cow position: chr16:13611570-13611399 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 125
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 9, 0

Conread position: 356-524
Cow position: chr16:820133-820306 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 129
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 50, 0

Conread position: 356-524
Cow position: chr16:33596049-33595881 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 123
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 53, 83

Conread position: 356-524
Cow position: chr16:50453647-50453814 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 123
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 51, 88

Conread position: 356-525
Cow position: chr16:3246320-3246148 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 133
Alignm E-value: 9e-33
Alignm gaps (pig, cow): 82, 0

Conread position: 356-525
Cow position: chr16:7583282-7583454 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 124
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 50, 0

Conread position: 356-525
Cow position: chr16:8025962-8025798 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 125
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 51, 37

Conread position: 356-525
Cow position: chr16:8933540-8933371 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 128
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 9, 85

Conread position: 356-525
Cow position: chr16:9933044-9933215 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 132
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 51, 24

Conread position: 356-525
Cow position: chr16:10148165-10148339 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 124
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 50, 0

Conread position: 356-525
Cow position: chr16:11008228-11008402 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 127
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 49, 0

Conread position: 356-525
Cow position: chr16:12633771-12633941 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 127
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 50, 93

Conread position: 356-525
Cow position: chr16:13698398-13698572 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 128
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 49, 7

Conread position: 356-525
Cow position: chr16:13969488-13969313 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 132
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 21, 8

Conread position: 356-525
Cow position: chr16:16265214-16265044 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 123
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 50, 31

Conread position: 356-525
Cow position: chr16:16402439-16402270 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 130
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 29, 96

Conread position: 356-525
Cow position: chr16:18354064-18353901 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 130
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 83, 29

Conread position: 356-525
Cow position: chr16:24672470-24672301 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 126
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 84, 148

Conread position: 356-525
Cow position: chr16:25380609-25380438 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 130
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 49, 82

Conread position: 356-525
Cow position: chr16:26373067-26372893 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 127
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 35, 153

Conread position: 356-525
Cow position: chr16:38243777-38243606 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 131
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 51, 132

Conread position: 356-525
Cow position: chr16:38663823-38663654 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 124
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 84, 161

Conread position: 356-525
Cow position: chr16:39165129-39165296 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 121
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 37, 0

Conread position: 356-525
Cow position: chr16:47854828-47854996 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 127
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 83, 105

Conread position: 356-525
Cow position: chr16:48385516-48385346 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 126
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 51, 153

Conread position: 356-525
Cow position: chr16:50289034-50289209 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 127
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 51, 0

Conread position: 356-525
Cow position: chr16:52133628-52133460 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 121
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 49, 83

Conread position: 356-525
Cow position: chr16:54083920-54084093 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 125
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 50, 0

Conread position: 356-525
Cow position: chr16:54226714-54226543 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 132
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 48, 152

Conread position: 356-525
Cow position: chr16:54734130-54734296 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 127
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 48, 95

Conread position: 356-525
Cow position: chr16:56082478-56082308 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 125
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 49, 93

Conread position: 357-525
Cow position: chr16:8448760-8448597 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 128
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 82, 125

Conread position: 357-525
Cow position: chr16:19047550-19047377 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 124
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 49, 0

Conread position: 357-525
Cow position: chr16:31978299-31978129 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 125
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 49, 72

Conread position: 357-525
Cow position: chr16:37380154-37380327 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 127
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 48, 0

Conread position: 357-525
Cow position: chr16:52275245-52275072 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 126
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 50, 0

Conread position: 358-525
Cow position: chr16:56565484-56565653 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 130
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 48, 91

Conread position: 361-518
Cow position: chr16:43105623-43105465 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 116
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 46, 60

Conread position: 361-521
Cow position: chr16:50521367-50521530 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 125
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 45, 116

Conread position: 361-525
Cow position: chr16:4699091-4698931 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 121
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 56, 0

Conread position: 361-525
Cow position: chr16:7549857-7550025 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 125
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 46, 24

Conread position: 361-525
Cow position: chr16:24825961-24826130 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 123
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 45, 0

Conread position: 361-525
Cow position: chr16:44744244-44744076 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 119
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 45, 0

Conread position: 364-519
Cow position: chr16:4144957-4145114 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 120
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 42, 126

Conread position: 364-521
Cow position: chr16:43674767-43674926 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 119
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 42, 61

Conread position: 364-525
Cow position: chr16:7152279-7152114 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 118
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 42, 0

Conread position: 364-525
Cow position: chr16:7665529-7665694 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 124
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 44, 68

Conread position: 364-525
Cow position: chr16:14685497-14685336 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 122
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 43, 79

Conread position: 364-525
Cow position: chr16:21317703-21317536 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 121
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 73, 0

Conread position: 364-525
Cow position: chr16:22772871-22773036 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 123
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 52, 23

Conread position: 364-525
Cow position: chr16:37452723-37452557 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 121
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 42, 0

Conread position: 368-525
Cow position: chr16:36121083-36120926 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 118
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 37, 74

Conread position: 376-525
Cow position: chr16:27160961-27160807 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 114
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 30, 0

Show alignments to all cow chromosomes.