Cow genome map

Conread name: rcki31_k1.y1

Conread position: 40-234
Cow position: chr2:57939386-57939581 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 156
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 61, 0

Conread position: 319-484
Cow position: chr2:32989921-32989753 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 122
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 39, 63

Conread position: 337-525
Cow position: chr2:50445765-50445959 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 139
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 67, 0

Conread position: 340-504
Cow position: chr2:69828966-69828800 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 133
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 22, 123

Conread position: 342-525
Cow position: chr2:51098216-51098028 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 130
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 64, 0

Conread position: 347-511
Cow position: chr2:23847949-23847783 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 120
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 97, 161

Conread position: 349-472
Cow position: chr2:81927732-81927858 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 99
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 58, 0

Conread position: 349-477
Cow position: chr2:38272287-38272155 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 102
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 55, 0

Conread position: 349-479
Cow position: chr2:51824802-51824936 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 103
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 57, 0

Conread position: 349-494
Cow position: chr2:41185351-41185495 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 115
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 16, 98

Conread position: 349-521
Cow position: chr2:80769996-80770167 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 129
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 57, 157

Conread position: 349-524
Cow position: chr2:45439320-45439490 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 133
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 55, 7

Conread position: 349-524
Cow position: chr2:85339581-85339402 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 125
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 101, 0

Conread position: 349-525
Cow position: chr2:6038886-6039070 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 134
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 57, 0

Conread position: 349-525
Cow position: chr2:15250059-15250239 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 134
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 57, 43

Conread position: 349-525
Cow position: chr2:32416977-32416803 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 135
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 148, 53

Conread position: 349-525
Cow position: chr2:39815405-39815227 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 129
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 57, 49

Conread position: 349-525
Cow position: chr2:40691367-40691539 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 128
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 55, 88

Conread position: 349-525
Cow position: chr2:44081313-44081494 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 129
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 58, 0

Conread position: 349-525
Cow position: chr2:49467506-49467686 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 128
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 56, 0

Conread position: 349-525
Cow position: chr2:51594642-51594822 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 136
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 55, 0

Conread position: 349-525
Cow position: chr2:69250794-69250612 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 138
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 18, 146

Conread position: 352-515
Cow position: chr2:26851044-26851211 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 123
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 53, 145

Conread position: 352-521
Cow position: chr2:45565585-45565757 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 125
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 53, 99

Conread position: 353-524
Cow position: chr2:39564237-39564410 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 127
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 54, 40

Conread position: 353-525
Cow position: chr2:4016957-4016791 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 130
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 53, 90

Conread position: 356-470
Cow position: chr2:45907164-45907277 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 95
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 83, 55

Conread position: 356-472
Cow position: chr2:46020791-46020909 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 93
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 51, 0

Conread position: 356-472
Cow position: chr2:80797556-80797669 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 94
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 89, 0

Conread position: 356-479
Cow position: chr2:16564573-16564697 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 100
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 50, 77

Conread position: 356-499
Cow position: chr2:11412482-11412630 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 114
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 51, 0

Conread position: 356-501
Cow position: chr2:61187241-61187102 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 110
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 85, 0

Conread position: 356-502
Cow position: chr2:46406204-46406360 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 119
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 50, 0

Conread position: 356-517
Cow position: chr2:24271118-24271277 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 120
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 51, 84

Conread position: 356-518
Cow position: chr2:70674612-70674776 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 122
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 50, 133

Conread position: 356-521
Cow position: chr2:30642776-30642610 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 119
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 44, 85

Conread position: 356-521
Cow position: chr2:45880893-45880723 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 126
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 51, 0

Conread position: 356-521
Cow position: chr2:70945289-70945457 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 130
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 84, 0

Conread position: 356-521
Cow position: chr2:73353678-73353845 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 128
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 50, 148

Conread position: 356-522
Cow position: chr2:16331955-16332118 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 123
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 39, 49

Conread position: 356-524
Cow position: chr2:11616982-11617151 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 127
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 50, 101

Conread position: 356-524
Cow position: chr2:76110282-76110452 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 129
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 50, 66

Conread position: 356-524
Cow position: chr2:81894458-81894285 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 125
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 50, 0

Conread position: 356-525
Cow position: chr2:7524249-7524075 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 127
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 51, 0

Conread position: 356-525
Cow position: chr2:17328634-17328807 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 128
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 50, 69

Conread position: 356-525
Cow position: chr2:17940401-17940231 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 126
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 48, 137

Conread position: 356-525
Cow position: chr2:19212167-19211998 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 129
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 50, 65

Conread position: 356-525
Cow position: chr2:19294477-19294651 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 129
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 50, 0

Conread position: 356-525
Cow position: chr2:27173255-27173425 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 123
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 50, 149

Conread position: 356-525
Cow position: chr2:34535271-34535100 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 129
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 51, 0

Conread position: 356-525
Cow position: chr2:38273430-38273607 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 130
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 48, 0

Conread position: 356-525
Cow position: chr2:39263377-39263544 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 132
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 54, 12

Conread position: 356-525
Cow position: chr2:41954769-41954943 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 127
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 51, 0

Conread position: 356-525
Cow position: chr2:45281535-45281707 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 121
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 48, 0

Conread position: 356-525
Cow position: chr2:45623902-45624071 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 124
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 51, 87

Conread position: 356-525
Cow position: chr2:47055794-47055964 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 123
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 80, 102

Conread position: 356-525
Cow position: chr2:52171144-52171313 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 125
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 51, 18

Conread position: 356-525
Cow position: chr2:58135509-58135335 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 125
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 53, 0

Conread position: 356-525
Cow position: chr2:62644474-62644644 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 130
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 48, 94

Conread position: 356-525
Cow position: chr2:80115985-80116154 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 135
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 50, 36

Conread position: 356-525
Cow position: chr2:80963761-80963593 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 128
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 50, 145

Conread position: 356-525
Cow position: chr2:84970823-84970656 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 125
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 74, 44

Conread position: 357-524
Cow position: chr2:54790169-54790337 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 123
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 48, 76

Conread position: 357-525
Cow position: chr2:387888-387718 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 126
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 49, 83

Conread position: 357-525
Cow position: chr2:12051038-12051208 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 128
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 49, 152

Conread position: 357-525
Cow position: chr2:54967893-54968065 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 126
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 49, 0

Conread position: 361-521
Cow position: chr2:21845-21682 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 130
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 46, 104

Conread position: 361-525
Cow position: chr2:19138003-19137833 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 132
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 46, 0

Conread position: 361-525
Cow position: chr2:29734713-29734879 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 131
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 45, 143

Conread position: 361-525
Cow position: chr2:44222712-44222881 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 122
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 50, 0

Conread position: 361-525
Cow position: chr2:67927905-67927738 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 121
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 44, 69

Conread position: 364-496
Cow position: chr2:51638449-51638578 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 106
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 42, 68

Conread position: 364-525
Cow position: chr2:13582475-13582640 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 121
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 43, 161

Conread position: 364-525
Cow position: chr2:22113809-22113639 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 130
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 43, 0

Conread position: 364-525
Cow position: chr2:42255329-42255492 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 125
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 43, 76

Conread position: 364-525
Cow position: chr2:44232557-44232396 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 122
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 42, 84

Conread position: 365-521
Cow position: chr2:69367234-69367074 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 116
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 41, 0

Conread position: 365-525
Cow position: chr2:26879978-26880139 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 125
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 40, 125

Conread position: 365-525
Cow position: chr2:77281914-77282077 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 123
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 41, 125

Conread position: 368-521
Cow position: chr2:44004854-44005009 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 116
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 35, 136

Conread position: 368-525
Cow position: chr2:46971016-46971179 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 120
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 38, 0

Conread position: 371-525
Cow position: chr2:21416205-21416354 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 122
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 35, 72

Show alignments to all cow chromosomes.