Cow genome map

Conread name: rcki31_k1.y1

Conread position: 343-525
Cow position: chr22:3965052-3965239 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 136
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 23, 147

Conread position: 343-525
Cow position: chr22:9372391-9372574 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 136
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 106, 31

Conread position: 345-525
Cow position: chr22:23176569-23176388 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 139
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 21, 77

Conread position: 347-525
Cow position: chr22:1848943-1849127 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 133
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 55, 0

Conread position: 347-525
Cow position: chr22:34712596-34712779 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 138
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 60, 0

Conread position: 347-525
Cow position: chr22:44410598-44410774 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 130
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 100, 113

Conread position: 348-478
Cow position: chr22:42684780-42684915 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 105
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 52, 0

Conread position: 348-479
Cow position: chr22:41045039-41044902 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 107
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 14, 0

Conread position: 348-484
Cow position: chr22:32895090-32895232 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 109
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 58, 0

Conread position: 348-525
Cow position: chr22:644891-644715 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 132
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 14, 44

Conread position: 348-525
Cow position: chr22:4076016-4075833 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 135
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 60, 0

Conread position: 348-525
Cow position: chr22:15490532-15490707 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 133
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 61, 43

Conread position: 348-525
Cow position: chr22:34476129-34475947 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 137
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 59, 0

Conread position: 349-472
Cow position: chr22:12598961-12599087 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 101
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 41, 13

Conread position: 349-473
Cow position: chr22:24734438-24734310 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 101
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 55, 0

Conread position: 349-508
Cow position: chr22:25629889-25629728 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 122
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 16, 100

Conread position: 349-519
Cow position: chr22:34750552-34750722 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 124
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 85, 99

Conread position: 349-520
Cow position: chr22:31153830-31154002 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 123
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 53, 90

Conread position: 349-524
Cow position: chr22:28058179-28057998 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 133
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 13, 0

Conread position: 349-525
Cow position: chr22:877387-877568 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 131
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 13, 0

Conread position: 349-525
Cow position: chr22:6622371-6622194 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 129
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 16, 94

Conread position: 349-525
Cow position: chr22:8090654-8090479 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 128
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 57, 145

Conread position: 349-525
Cow position: chr22:14691093-14690918 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 131
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 55, 72

Conread position: 349-525
Cow position: chr22:15025235-15025057 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 129
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 57, 0

Conread position: 349-525
Cow position: chr22:22861035-22860859 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 128
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 57, 100

Conread position: 349-525
Cow position: chr22:23854848-23855026 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 128
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 57, 101

Conread position: 349-525
Cow position: chr22:23856923-23857099 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 129
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 57, 90

Conread position: 349-525
Cow position: chr22:30515126-30515310 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 133
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 56, 0

Conread position: 349-525
Cow position: chr22:40789443-40789619 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 131
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 88, 53

Conread position: 351-521
Cow position: chr22:16044543-16044367 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 135
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 55, 0

Conread position: 351-521
Cow position: chr22:19890836-19891007 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 125
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 55, 79

Conread position: 351-525
Cow position: chr22:12829735-12829556 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 134
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 57, 92

Conread position: 352-525
Cow position: chr22:10609230-10609411 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 135
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 10, 0

Conread position: 352-525
Cow position: chr22:16251689-16251520 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 128
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 10, 92

Conread position: 353-525
Cow position: chr22:40120997-40120823 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 126
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 92, 42

Conread position: 353-525
Cow position: chr22:45132773-45132594 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 130
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 54, 154

Conread position: 354-524
Cow position: chr22:17295054-17294884 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 125
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 8, 15

Conread position: 354-525
Cow position: chr22:16532955-16533127 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 121
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 52, 78

Conread position: 354-525
Cow position: chr22:30483795-30483968 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 126
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 6, 84

Conread position: 356-472
Cow position: chr22:4974542-4974423 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 94
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 53, 0

Conread position: 356-476
Cow position: chr22:25341902-25342020 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 98
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 85, 0

Conread position: 356-483
Cow position: chr22:15020515-15020387 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 100
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 50, 87

Conread position: 356-496
Cow position: chr22:43292015-43291873 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 105
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 51, 0

Conread position: 356-497
Cow position: chr22:3241817-3241674 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 108
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 56, 0

Conread position: 356-499
Cow position: chr22:17125467-17125612 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 111
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 84, 0

Conread position: 356-521
Cow position: chr22:4583439-4583608 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 129
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 40, 148

Conread position: 356-521
Cow position: chr22:8412409-8412577 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 122
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 50, 81

Conread position: 356-521
Cow position: chr22:13841019-13841188 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 128
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 51, 33

Conread position: 356-521
Cow position: chr22:27322199-27322363 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 122
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 51, 93

Conread position: 356-524
Cow position: chr22:534380-534551 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 125
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 39, 0

Conread position: 356-524
Cow position: chr22:1975493-1975666 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 123
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 50, 0

Conread position: 356-524
Cow position: chr22:5837149-5837322 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 130
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 47, 0

Conread position: 356-524
Cow position: chr22:12315693-12315863 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 126
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 51, 84

Conread position: 356-524
Cow position: chr22:12968188-12968017 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 126
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 46, 0

Conread position: 356-525
Cow position: chr22:1911551-1911718 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 123
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 50, 20

Conread position: 356-525
Cow position: chr22:2523845-2524016 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 125
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 51, 23

Conread position: 356-525
Cow position: chr22:3950133-3950305 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 131
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 50, 157

Conread position: 356-525
Cow position: chr22:7153767-7153934 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 127
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 51, 93

Conread position: 356-525
Cow position: chr22:7838474-7838643 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 129
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 46, 92

Conread position: 356-525
Cow position: chr22:11130749-11130923 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 134
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 50, 0

Conread position: 356-525
Cow position: chr22:12388978-12389152 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 131
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 51, 0

Conread position: 356-525
Cow position: chr22:16621057-16621229 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 127
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 50, 0

Conread position: 356-525
Cow position: chr22:21567878-21568050 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 127
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 50, 83

Conread position: 356-525
Cow position: chr22:28665167-28665336 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 128
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 50, 87

Conread position: 356-525
Cow position: chr22:33448200-33448028 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 125
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 53, 120

Conread position: 356-525
Cow position: chr22:34398576-34398403 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 123
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 49, 0

Conread position: 356-525
Cow position: chr22:37201735-37201902 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 131
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 50, 81

Conread position: 356-525
Cow position: chr22:37324426-37324597 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 128
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 51, 63

Conread position: 356-525
Cow position: chr22:44180473-44180646 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 131
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 50, 29

Conread position: 358-482
Cow position: chr22:31870368-31870238 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 103
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 47, 0

Conread position: 358-525
Cow position: chr22:27329005-27328841 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 123
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 89, 53

Conread position: 361-476
Cow position: chr22:1727764-1727878 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 94
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 55, 86

Conread position: 361-525
Cow position: chr22:6852697-6852531 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 127
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 45, 134

Conread position: 361-525
Cow position: chr22:10420917-10421085 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 127
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 46, 37

Conread position: 361-525
Cow position: chr22:10632805-10632967 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 122
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 77, 50

Conread position: 364-518
Cow position: chr22:7164850-7165008 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 117
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 43, 84

Conread position: 364-521
Cow position: chr22:1266039-1265875 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 121
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 41, 0

Conread position: 364-525
Cow position: chr22:46567999-46567839 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 118
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 43, 79

Conread position: 365-525
Cow position: chr22:26339646-26339807 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 123
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 73, 0

Conread position: 368-525
Cow position: chr22:4135511-4135669 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 114
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 38, 56

Conread position: 368-525
Cow position: chr22:14924839-14924679 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 117
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 41, 132

Conread position: 369-525
Cow position: chr22:13222006-13222170 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 120
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 38, 0

Conread position: 370-520
Cow position: chr22:3842513-3842665 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 116
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 36, 140

Conread position: 371-525
Cow position: chr22:27740791-27740943 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 117
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 35, 72

Show alignments to all cow chromosomes.