Cow genome map

Conread name: rcki31_k1.y1

Conread position: 45-464
Cow position: chr23:22574347-22573921 (view UCSC Genome Browser custom track)
Alignm length: 442
Alignm identity: 299
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 63, 17

Conread position: 343-525
Cow position: chr23:38208595-38208785 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 139
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 18, 0

Conread position: 345-525
Cow position: chr23:18402414-18402231 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 132
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 8, 83

Conread position: 346-525
Cow position: chr23:39780634-39780813 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 133
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 58, 10

Conread position: 347-525
Cow position: chr23:3522630-3522809 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 132
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 60, 29

Conread position: 348-496
Cow position: chr23:14164523-14164368 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 117
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 46, 0

Conread position: 349-479
Cow position: chr23:3247464-3247595 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 107
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 57, 100

Conread position: 349-518
Cow position: chr23:33153310-33153141 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 123
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 56, 99

Conread position: 349-519
Cow position: chr23:39752997-39753167 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 122
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 55, 137

Conread position: 349-521
Cow position: chr23:20056987-20056812 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 128
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 57, 160

Conread position: 349-525
Cow position: chr23:4329802-4329616 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 133
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 16, 0

Conread position: 349-525
Cow position: chr23:13599224-13599399 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 132
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 56, 94

Conread position: 349-525
Cow position: chr23:28945185-28945010 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 125
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 56, 98

Conread position: 349-525
Cow position: chr23:30950839-30951013 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 128
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 36, 0

Conread position: 349-525
Cow position: chr23:35239228-35239409 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 133
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 58, 13

Conread position: 350-525
Cow position: chr23:39275770-39275950 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 132
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 59, 0

Conread position: 351-525
Cow position: chr23:20557963-20557786 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 132
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 57, 11

Conread position: 353-525
Cow position: chr23:1701052-1701230 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 132
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 13, 0

Conread position: 355-521
Cow position: chr23:9734300-9734463 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 126
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 51, 85

Conread position: 356-476
Cow position: chr23:1928918-1929041 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 96
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 48, 0

Conread position: 356-476
Cow position: chr23:33601641-33601517 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 98
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 50, 0

Conread position: 356-483
Cow position: chr23:23113918-23114049 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 102
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 50, 0

Conread position: 356-495
Cow position: chr23:9713206-9713351 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 111
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 31, 0

Conread position: 356-496
Cow position: chr23:5723431-5723575 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 109
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 50, 0

Conread position: 356-499
Cow position: chr23:1670788-1670935 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 110
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 53, 0

Conread position: 356-512
Cow position: chr23:13945922-13946084 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 118
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 51, 0

Conread position: 356-516
Cow position: chr23:5436754-5436593 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 124
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 83, 46

Conread position: 356-521
Cow position: chr23:27544714-27544882 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 121
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 9, 78

Conread position: 356-521
Cow position: chr23:34356530-34356697 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 124
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 48, 77

Conread position: 356-521
Cow position: chr23:38455295-38455124 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 132
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 51, 0

Conread position: 356-522
Cow position: chr23:1254576-1254743 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 119
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 86, 0

Conread position: 356-524
Cow position: chr23:1921339-1921169 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 127
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 50, 77

Conread position: 356-524
Cow position: chr23:33711648-33711818 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 123
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 50, 81

Conread position: 356-525
Cow position: chr23:1398148-1397980 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 124
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 48, 93

Conread position: 356-525
Cow position: chr23:1655781-1655953 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 128
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 55, 0

Conread position: 356-525
Cow position: chr23:1767715-1767887 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 131
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 31, 0

Conread position: 356-525
Cow position: chr23:3245029-3244855 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 128
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 50, 0

Conread position: 356-525
Cow position: chr23:4968634-4968465 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 126
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 51, 80

Conread position: 356-525
Cow position: chr23:5162314-5162488 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 133
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 50, 138

Conread position: 356-525
Cow position: chr23:18296695-18296865 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 124
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 50, 127

Conread position: 356-525
Cow position: chr23:21336600-21336425 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 127
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 51, 0

Conread position: 356-525
Cow position: chr23:21446007-21446175 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 127
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 50, 8

Conread position: 356-525
Cow position: chr23:22804612-22804783 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 122
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 50, 93

Conread position: 356-525
Cow position: chr23:23409626-23409791 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 128
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 50, 77

Conread position: 356-525
Cow position: chr23:26795021-26794854 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 124
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 51, 14

Conread position: 356-525
Cow position: chr23:36309307-36309479 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 128
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 50, 129

Conread position: 356-525
Cow position: chr23:37065729-37065908 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 132
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 50, 0

Conread position: 356-525
Cow position: chr23:38973733-38973906 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 138
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 38, 148

Conread position: 364-525
Cow position: chr23:19371176-19371016 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 122
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 42, 78

Conread position: 364-525
Cow position: chr23:33570030-33570193 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 123
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 43, 87

Conread position: 367-525
Cow position: chr23:25675802-25675641 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 115
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 39, 0

Conread position: 368-525
Cow position: chr23:4562784-4562944 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 116
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 36, 0

Conread position: 373-521
Cow position: chr23:29069539-29069386 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 113
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 33, 0

Show alignments to all cow chromosomes.