Cow genome map
| Conread name: | rcki31_k1.y1 |
| Conread position: | 341-496 |
| Cow position: | chr25:36535570-36535408 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 122 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 343-495 |
| Cow position: | chr25:13640253-13640405 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 113 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 64, 105 |
| Conread position: | 348-477 |
| Cow position: | chr25:31732461-31732330 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 103 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 58, 89 |
| Conread position: | 348-477 |
| Cow position: | chr25:31732859-31732728 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 103 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 58, 89 |
| Conread position: | 349-484 |
| Cow position: | chr25:35333033-35333172 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 106 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 349-521 |
| Cow position: | chr25:20008010-20008183 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 126 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 57, 70 |
| Conread position: | 349-524 |
| Cow position: | chr25:18905760-18905938 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 133 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 349-525 |
| Cow position: | chr25:15377203-15377380 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 132 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 92, 40 |
| Conread position: | 349-525 |
| Cow position: | chr25:16921915-16921743 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 131 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 87, 36 |
| Conread position: | 351-525 |
| Cow position: | chr25:22730712-22730884 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 132 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 56, 34 |
| Conread position: | 355-525 |
| Cow position: | chr25:38425243-38425415 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 127 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 50, 0 |
| Conread position: | 356-444 |
| Cow position: | chr25:10365868-10365780 (view UCSC Genome Browser custom track) |
| Alignm length: | 89 |
| Alignm identity: | 77 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 356-472 |
| Cow position: | chr25:4002683-4002803 (view UCSC Genome Browser custom track) |
| Alignm length: | 121 |
| Alignm identity: | 96 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 49, 0 |
| Conread position: | 356-472 |
| Cow position: | chr25:13569288-13569171 (view UCSC Genome Browser custom track) |
| Alignm length: | 119 |
| Alignm identity: | 94 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 48, 87 |
| Conread position: | 356-476 |
| Cow position: | chr25:12824137-12824012 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 101 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 50, 0 |
| Conread position: | 356-496 |
| Cow position: | chr25:12755608-12755462 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 112 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 50, 0 |
| Conread position: | 356-518 |
| Cow position: | chr25:24504615-24504453 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 120 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 85, 134 |
| Conread position: | 356-519 |
| Cow position: | chr25:26654792-26654955 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 130 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 50, 124 |
| Conread position: | 356-521 |
| Cow position: | chr25:12840840-12840668 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 126 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 52, 93 |
| Conread position: | 356-522 |
| Cow position: | chr25:9957157-9956987 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 127 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 51, 104 |
| Conread position: | 356-523 |
| Cow position: | chr25:10218165-10217997 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 119 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 50, 87 |
| Conread position: | 356-524 |
| Cow position: | chr25:1838120-1838294 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 130 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 50, 74 |
| Conread position: | 356-525 |
| Cow position: | chr25:10504455-10504287 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 126 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 56, 145 |
| Conread position: | 356-525 |
| Cow position: | chr25:16714385-16714215 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 127 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 90, 51 |
| Conread position: | 356-525 |
| Cow position: | chr25:19317144-19317319 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 129 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 50, 8 |
| Conread position: | 356-525 |
| Cow position: | chr25:21893217-21893392 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 127 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 6, 0 |
| Conread position: | 356-525 |
| Cow position: | chr25:21895003-21894831 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 129 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 50, 8 |
| Conread position: | 356-525 |
| Cow position: | chr25:22751127-22750953 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 123 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 356-525 |
| Cow position: | chr25:26087403-26087573 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 128 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 48, 66 |
| Conread position: | 356-525 |
| Cow position: | chr25:26225142-26224975 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 127 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 52, 10 |
| Conread position: | 356-525 |
| Cow position: | chr25:27801169-27801332 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 130 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 48, 87 |
| Conread position: | 356-525 |
| Cow position: | chr25:28188064-28187891 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 136 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 50, 108 |
| Conread position: | 356-525 |
| Cow position: | chr25:36761989-36762159 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 123 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 97, 0 |
| Conread position: | 361-525 |
| Cow position: | chr25:30816773-30816943 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 127 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 364-522 |
| Cow position: | chr25:9754198-9754045 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 115 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 52, 0 |
| Conread position: | 364-525 |
| Cow position: | chr25:1824205-1824043 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 120 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 83, 0 |
| Conread position: | 366-521 |
| Cow position: | chr25:13443521-13443360 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 123 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 39, 101 |
| Conread position: | 368-524 |
| Cow position: | chr25:12252918-12252756 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 124 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 39, 132 |
| Conread position: | 368-525 |
| Cow position: | chr25:11585411-11585572 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 123 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 39, 0 |
| Conread position: | 370-525 |
| Cow position: | chr25:36081773-36081929 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 116 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 36, 113 |
| Conread position: | 374-511 |
| Cow position: | chr25:30449942-30450085 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 109 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 33, 0 |
Show alignments to all cow chromosomes.