Cow genome map


           Conread name:
           rcki31_k1.y1
        

               Conread position:
               39-524
               

               Cow position:
               
               

               Alignm length:
               501
               

               Alignm identity:
               346
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               69, 23
               

               Conread position:
               340-525
               

               Cow position:
               
               

               Alignm length:
               195
               

               Alignm identity:
               142
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               16, 182
               

               Conread position:
               340-525
               

               Cow position:
               
               

               Alignm length:
               191
               

               Alignm identity:
               140
               

               Alignm E-value:
               9e-27
               

               Alignm gaps (pig, cow):
               22, 163
               

               Conread position:
               340-525
               

               Cow position:
               
               

               Alignm length:
               190
               

               Alignm identity:
               139
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               107, 13
               

               Conread position:
               343-525
               

               Cow position:
               
               

               Alignm length:
               187
               

               Alignm identity:
               136
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               347-476
               

               Cow position:
               
               

               Alignm length:
               136
               

               Alignm identity:
               107
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               7, 0
               

               Conread position:
               349-523
               

               Cow position:
               
               

               Alignm length:
               179
               

               Alignm identity:
               129
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               62, 0
               

               Conread position:
               349-525
               

               Cow position:
               
               

               Alignm length:
               183
               

               Alignm identity:
               130
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               57, 97
               

               Conread position:
               349-525
               

               Cow position:
               
               

               Alignm length:
               183
               

               Alignm identity:
               133
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               58, 0
               

               Conread position:
               349-525
               

               Cow position:
               
               

               Alignm length:
               188
               

               Alignm identity:
               139
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               55, 0
               

               Conread position:
               351-499
               

               Cow position:
               
               

               Alignm length:
               154
               

               Alignm identity:
               118
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               56, 134
               

               Conread position:
               351-499
               

               Cow position:
               
               

               Alignm length:
               156
               

               Alignm identity:
               116
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               55, 0
               

               Conread position:
               351-525
               

               Cow position:
               
               

               Alignm length:
               175
               

               Alignm identity:
               126
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               13, 0
               

               Conread position:
               351-525
               

               Cow position:
               
               

               Alignm length:
               181
               

               Alignm identity:
               131
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               54, 68
               

               Conread position:
               353-525
               

               Cow position:
               
               

               Alignm length:
               177
               

               Alignm identity:
               135
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               54, 25
               

               Conread position:
               356-472
               

               Cow position:
               
               

               Alignm length:
               121
               

               Alignm identity:
               96
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               50, 0
               

               Conread position:
               356-474
               

               Cow position:
               
               

               Alignm length:
               123
               

               Alignm identity:
               97
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               92, 0
               

               Conread position:
               356-515
               

               Cow position:
               
               

               Alignm length:
               163
               

               Alignm identity:
               120
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               50, 0
               

               Conread position:
               356-516
               

               Cow position:
               
               

               Alignm length:
               166
               

               Alignm identity:
               124
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               49, 77
               

               Conread position:
               356-521
               

               Cow position:
               
               

               Alignm length:
               169
               

               Alignm identity:
               129
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               9, 82
               

               Conread position:
               356-521
               

               Cow position:
               
               

               Alignm length:
               169
               

               Alignm identity:
               130
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               52, 95
               

               Conread position:
               356-521
               

               Cow position:
               
               

               Alignm length:
               168
               

               Alignm identity:
               125
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               50, 131
               

               Conread position:
               356-521
               

               Cow position:
               
               

               Alignm length:
               172
               

               Alignm identity:
               125
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               46, 128
               

               Conread position:
               356-521
               

               Cow position:
               
               

               Alignm length:
               169
               

               Alignm identity:
               126
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               6, 95
               

               Conread position:
               356-521
               

               Cow position:
               
               

               Alignm length:
               168
               

               Alignm identity:
               119
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               49, 87
               

               Conread position:
               356-525
               

               Cow position:
               
               

               Alignm length:
               173
               

               Alignm identity:
               123
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               51, 15
               

               Conread position:
               356-525
               

               Cow position:
               
               

               Alignm length:
               174
               

               Alignm identity:
               125
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               51, 0
               

               Conread position:
               356-525
               

               Cow position:
               
               

               Alignm length:
               180
               

               Alignm identity:
               134
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               6, 0
               

               Conread position:
               356-525
               

               Cow position:
               
               

               Alignm length:
               173
               

               Alignm identity:
               122
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               24, 94
               

               Conread position:
               356-525
               

               Cow position:
               
               

               Alignm length:
               175
               

               Alignm identity:
               132
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               50, 36
               

               Conread position:
               356-525
               

               Cow position:
               
               

               Alignm length:
               173
               

               Alignm identity:
               126
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               81, 44
               

               Conread position:
               356-525
               

               Cow position:
               
               

               Alignm length:
               174
               

               Alignm identity:
               131
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               50, 0
               

               Conread position:
               356-525
               

               Cow position:
               
               

               Alignm length:
               175
               

               Alignm identity:
               135
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               51, 0
               

               Conread position:
               356-525
               

               Cow position:
               
               

               Alignm length:
               173
               

               Alignm identity:
               126
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               50, 0
               

               Conread position:
               356-525
               

               Cow position:
               
               

               Alignm length:
               174
               

               Alignm identity:
               129
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               51, 0
               

               Conread position:
               356-525
               

               Cow position:
               
               

               Alignm length:
               173
               

               Alignm identity:
               124
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               51, 66
               

               Conread position:
               357-484
               

               Cow position:
               
               

               Alignm length:
               133
               

               Alignm identity:
               104
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               50, 0
               

               Conread position:
               357-525
               

               Cow position:
               
               

               Alignm length:
               171
               

               Alignm identity:
               121
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               50, 86
               

               Conread position:
               358-472
               

               Cow position:
               
               

               Alignm length:
               121
               

               Alignm identity:
               100
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               48, 0
               

               Conread position:
               358-525
               

               Cow position:
               
               

               Alignm length:
               168
               

               Alignm identity:
               133
               

               Alignm E-value:
               8e-36
               

               Alignm gaps (pig, cow):
               24, 0
               

               Conread position:
               361-522
               

               Cow position:
               
               

               Alignm length:
               164
               

               Alignm identity:
               118
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               87, 145
               

               Conread position:
               364-525
               

               Cow position:
               
               

               Alignm length:
               166
               

               Alignm identity:
               118
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               41, 0
               

               Conread position:
               364-525
               

               Cow position:
               
               

               Alignm length:
               162
               

               Alignm identity:
               115
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               55, 0
               

               Conread position:
               364-525
               

               Cow position:
               
               

               Alignm length:
               165
               

               Alignm identity:
               117
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               76, 0
               

               Conread position:
               364-525
               

               Cow position:
               
               

               Alignm length:
               173
               

               Alignm identity:
               127
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               42, 102
               

               Conread position:
               369-525
               

               Cow position:
               
               

               Alignm length:
               160
               

               Alignm identity:
               116
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               38, 0
               

               Conread position:
               376-525
               

               Cow position:
               
               

               Alignm length:
               154
               

               Alignm identity:
               113
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               388-525
               

               Cow position:
               
               

               Alignm length:
               141
               

               Alignm identity:
               107
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               19, 0
               
Show alignments to all cow chromosomes.