Cow genome map

Conread name: rcki31_k1.y1

Conread position: 335-525
Cow position: chr3:17058700-17058514 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 140
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 69, 33

Conread position: 337-515
Cow position: chr3:74500085-74500265 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 136
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 69, 15

Conread position: 338-525
Cow position: chr3:15228974-15228791 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 135
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 17, 0

Conread position: 340-525
Cow position: chr3:48900493-48900301 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 139
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 96, 47

Conread position: 343-525
Cow position: chr3:53739338-53739153 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 131
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 54, 0

Conread position: 347-484
Cow position: chr3:76169432-76169293 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 108
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 60, 18

Conread position: 347-525
Cow position: chr3:71430354-71430172 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 135
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 59, 15

Conread position: 348-525
Cow position: chr3:64281079-64280898 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 128
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 58, 0

Conread position: 348-525
Cow position: chr3:71231249-71231427 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 137
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 16, 102

Conread position: 349-472
Cow position: chr3:27212215-27212343 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 101
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 57, 0

Conread position: 349-479
Cow position: chr3:49731789-49731653 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 107
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 14, 0

Conread position: 349-499
Cow position: chr3:49218460-49218308 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 116
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 58, 100

Conread position: 349-525
Cow position: chr3:3985181-3985354 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 130
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 56, 138

Conread position: 349-525
Cow position: chr3:4319568-4319743 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 133
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 13, 31

Conread position: 349-525
Cow position: chr3:15052098-15051919 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 139
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 58, 160

Conread position: 349-525
Cow position: chr3:17935080-17934906 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 128
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 91, 19

Conread position: 349-525
Cow position: chr3:24935224-24935397 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 130
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 57, 76

Conread position: 349-525
Cow position: chr3:28908348-28908171 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 133
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 58, 40

Conread position: 349-525
Cow position: chr3:31047097-31046920 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 127
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 57, 102

Conread position: 349-525
Cow position: chr3:48241470-48241646 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 138
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 57, 117

Conread position: 349-525
Cow position: chr3:59473974-59474154 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 128
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 55, 0

Conread position: 349-525
Cow position: chr3:66609989-66609812 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 131
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 55, 139

Conread position: 349-525
Cow position: chr3:67704396-67704578 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 131
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 55, 0

Conread position: 349-525
Cow position: chr3:72675946-72676123 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 126
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 57, 96

Conread position: 349-525
Cow position: chr3:73708902-73709079 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 133
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 55, 43

Conread position: 349-525
Cow position: chr3:75570594-75570420 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 136
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 15, 59

Conread position: 349-525
Cow position: chr3:82461031-82461211 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 126
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 11, 0

Conread position: 351-470
Cow position: chr3:78894467-78894348 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 94
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 351-525
Cow position: chr3:46901054-46901231 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 135
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 56, 17

Conread position: 351-525
Cow position: chr3:67520316-67520134 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 131
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 56, 0

Conread position: 351-525
Cow position: chr3:71497286-71497106 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 135
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 56, 38

Conread position: 352-484
Cow position: chr3:25059935-25060071 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 105
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 54, 0

Conread position: 352-521
Cow position: chr3:61840133-61840303 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 128
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 54, 151

Conread position: 352-525
Cow position: chr3:2506619-2506446 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 135
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 54, 89

Conread position: 352-525
Cow position: chr3:17235352-17235179 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 131
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 55, 33

Conread position: 356-476
Cow position: chr3:61024442-61024318 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 99
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 49, 0

Conread position: 356-496
Cow position: chr3:77581970-77582112 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 109
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 51, 0

Conread position: 356-519
Cow position: chr3:39328256-39328426 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 125
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 50, 0

Conread position: 356-519
Cow position: chr3:44101833-44101995 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 123
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 50, 9

Conread position: 356-521
Cow position: chr3:37041275-37041447 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 123
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 51, 0

Conread position: 356-521
Cow position: chr3:62046523-62046692 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 124
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 86, 105

Conread position: 356-524
Cow position: chr3:43726938-43727110 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 129
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 51, 29

Conread position: 356-524
Cow position: chr3:63269083-63269254 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 127
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 51, 0

Conread position: 356-524
Cow position: chr3:73394982-73395147 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 126
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 51, 81

Conread position: 356-525
Cow position: chr3:3032266-3032439 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 127
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 49, 147

Conread position: 356-525
Cow position: chr3:4050055-4050225 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 126
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 51, 117

Conread position: 356-525
Cow position: chr3:5097067-5097239 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 134
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 51, 0

Conread position: 356-525
Cow position: chr3:5365538-5365709 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 121
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 53, 0

Conread position: 356-525
Cow position: chr3:11711822-11711997 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 129
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 48, 0

Conread position: 356-525
Cow position: chr3:26920770-26920940 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 126
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 84, 120

Conread position: 356-525
Cow position: chr3:30179942-30180118 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 128
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 50, 0

Conread position: 356-525
Cow position: chr3:34669866-34669701 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 125
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 51, 123

Conread position: 356-525
Cow position: chr3:39171622-39171454 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 135
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 50, 120

Conread position: 356-525
Cow position: chr3:48252745-48252917 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 127
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 50, 66

Conread position: 356-525
Cow position: chr3:51578460-51578289 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 128
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 50, 93

Conread position: 356-525
Cow position: chr3:52863323-52863152 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 125
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 50, 97

Conread position: 356-525
Cow position: chr3:54100860-54100694 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 126
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 51, 86

Conread position: 356-525
Cow position: chr3:55819611-55819790 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 130
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 50, 0

Conread position: 356-525
Cow position: chr3:55970367-55970539 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 124
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 49, 0

Conread position: 356-525
Cow position: chr3:57624326-57624496 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 131
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 51, 20

Conread position: 356-525
Cow position: chr3:59884211-59884037 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 132
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 51, 0

Conread position: 356-525
Cow position: chr3:65969022-65969199 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 128
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 48, 0

Conread position: 356-525
Cow position: chr3:68586881-68587054 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 126
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 50, 163

Conread position: 356-525
Cow position: chr3:73820509-73820337 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 132
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 51, 112

Conread position: 356-525
Cow position: chr3:74878728-74878557 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 130
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 51, 94

Conread position: 356-525
Cow position: chr3:76268118-76267943 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 132
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 51, 0

Conread position: 356-525
Cow position: chr3:78896510-78896679 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 124
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 356-525
Cow position: chr3:79292691-79292860 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 125
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 32, 76

Conread position: 356-525
Cow position: chr3:80053678-80053510 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 125
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 50, 96

Conread position: 356-525
Cow position: chr3:80468814-80468644 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 128
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 51, 37

Conread position: 356-525
Cow position: chr3:80581525-80581687 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 128
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 48, 88

Conread position: 356-525
Cow position: chr3:80953507-80953679 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 124
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 49, 168

Conread position: 357-499
Cow position: chr3:59514966-59515110 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 109
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 50, 94

Conread position: 357-515
Cow position: chr3:83490948-83491108 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 119
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 49, 82

Conread position: 357-519
Cow position: chr3:12712056-12711889 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 130
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 50, 0

Conread position: 357-525
Cow position: chr3:17895708-17895881 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 130
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 82, 45

Conread position: 357-525
Cow position: chr3:39661588-39661425 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 123
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 45, 0

Conread position: 357-525
Cow position: chr3:67929399-67929228 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 122
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 49, 0

Conread position: 358-525
Cow position: chr3:70334832-70334663 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 124
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 49, 0

Conread position: 361-506
Cow position: chr3:9843453-9843601 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 110
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 62, 0

Conread position: 361-525
Cow position: chr3:46541962-46541797 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 119
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 46, 59

Conread position: 361-525
Cow position: chr3:53270695-53270862 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 119
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 45, 0

Conread position: 364-524
Cow position: chr3:63179731-63179888 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 119
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 42, 59

Conread position: 364-525
Cow position: chr3:22509895-22510059 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 118
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 42, 0

Conread position: 364-525
Cow position: chr3:84175957-84175791 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 120
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 40, 0

Conread position: 365-525
Cow position: chr3:23445023-23444856 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 126
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 72, 42

Conread position: 368-525
Cow position: chr3:65058576-65058730 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 121
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 38, 21

Conread position: 378-525
Cow position: chr3:72504016-72503864 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 114
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 28, 0

Conread position: 379-525
Cow position: chr3:74846826-74846677 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 112
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 63, 80

Conread position: 387-525
Cow position: chr3:65019974-65019833 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 108
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 20, 0

Show alignments to all cow chromosomes.