Cow genome map
| Conread name: | rcki31_k1.y1 | 
| Conread position: | 335-525 | 
| Cow position: | chr3:17058700-17058514 (view UCSC Genome Browser custom track) | 
| Alignm length: | 194 | 
| Alignm identity: | 140 | 
| Alignm E-value: | 2e-24 | 
| Alignm gaps (pig, cow): | 69, 33 | 
| Conread position: | 337-515 | 
| Cow position: | chr3:74500085-74500265 (view UCSC Genome Browser custom track) | 
| Alignm length: | 186 | 
| Alignm identity: | 136 | 
| Alignm E-value: | 2e-23 | 
| Alignm gaps (pig, cow): | 69, 15 | 
| Conread position: | 338-525 | 
| Cow position: | chr3:15228974-15228791 (view UCSC Genome Browser custom track) | 
| Alignm length: | 188 | 
| Alignm identity: | 135 | 
| Alignm E-value: | 8e-27 | 
| Alignm gaps (pig, cow): | 17, 0 | 
| Conread position: | 340-525 | 
| Cow position: | chr3:48900493-48900301 (view UCSC Genome Browser custom track) | 
| Alignm length: | 195 | 
| Alignm identity: | 139 | 
| Alignm E-value: | 4e-22 | 
| Alignm gaps (pig, cow): | 96, 47 | 
| Conread position: | 343-525 | 
| Cow position: | chr3:53739338-53739153 (view UCSC Genome Browser custom track) | 
| Alignm length: | 186 | 
| Alignm identity: | 131 | 
| Alignm E-value: | 2e-24 | 
| Alignm gaps (pig, cow): | 54, 0 | 
| Conread position: | 347-484 | 
| Cow position: | chr3:76169432-76169293 (view UCSC Genome Browser custom track) | 
| Alignm length: | 141 | 
| Alignm identity: | 108 | 
| Alignm E-value: | 5e-23 | 
| Alignm gaps (pig, cow): | 60, 18 | 
| Conread position: | 347-525 | 
| Cow position: | chr3:71430354-71430172 (view UCSC Genome Browser custom track) | 
| Alignm length: | 185 | 
| Alignm identity: | 135 | 
| Alignm E-value: | 2e-24 | 
| Alignm gaps (pig, cow): | 59, 15 | 
| Conread position: | 348-525 | 
| Cow position: | chr3:64281079-64280898 (view UCSC Genome Browser custom track) | 
| Alignm length: | 182 | 
| Alignm identity: | 128 | 
| Alignm E-value: | 1e-22 | 
| Alignm gaps (pig, cow): | 58, 0 | 
| Conread position: | 348-525 | 
| Cow position: | chr3:71231249-71231427 (view UCSC Genome Browser custom track) | 
| Alignm length: | 182 | 
| Alignm identity: | 137 | 
| Alignm E-value: | 9e-29 | 
| Alignm gaps (pig, cow): | 16, 102 | 
| Conread position: | 349-472 | 
| Cow position: | chr3:27212215-27212343 (view UCSC Genome Browser custom track) | 
| Alignm length: | 129 | 
| Alignm identity: | 101 | 
| Alignm E-value: | 1e-21 | 
| Alignm gaps (pig, cow): | 57, 0 | 
| Conread position: | 349-479 | 
| Cow position: | chr3:49731789-49731653 (view UCSC Genome Browser custom track) | 
| Alignm length: | 137 | 
| Alignm identity: | 107 | 
| Alignm E-value: | 4e-22 | 
| Alignm gaps (pig, cow): | 14, 0 | 
| Conread position: | 349-499 | 
| Cow position: | chr3:49218460-49218308 (view UCSC Genome Browser custom track) | 
| Alignm length: | 154 | 
| Alignm identity: | 116 | 
| Alignm E-value: | 2e-24 | 
| Alignm gaps (pig, cow): | 58, 100 | 
| Conread position: | 349-525 | 
| Cow position: | chr3:3985181-3985354 (view UCSC Genome Browser custom track) | 
| Alignm length: | 179 | 
| Alignm identity: | 130 | 
| Alignm E-value: | 2e-24 | 
| Alignm gaps (pig, cow): | 56, 138 | 
| Conread position: | 349-525 | 
| Cow position: | chr3:4319568-4319743 (view UCSC Genome Browser custom track) | 
| Alignm length: | 181 | 
| Alignm identity: | 133 | 
| Alignm E-value: | 5e-24 | 
| Alignm gaps (pig, cow): | 13, 31 | 
| Conread position: | 349-525 | 
| Cow position: | chr3:15052098-15051919 (view UCSC Genome Browser custom track) | 
| Alignm length: | 183 | 
| Alignm identity: | 139 | 
| Alignm E-value: | 3e-29 | 
| Alignm gaps (pig, cow): | 58, 160 | 
| Conread position: | 349-525 | 
| Cow position: | chr3:17935080-17934906 (view UCSC Genome Browser custom track) | 
| Alignm length: | 179 | 
| Alignm identity: | 128 | 
| Alignm E-value: | 1e-21 | 
| Alignm gaps (pig, cow): | 91, 19 | 
| Conread position: | 349-525 | 
| Cow position: | chr3:24935224-24935397 (view UCSC Genome Browser custom track) | 
| Alignm length: | 179 | 
| Alignm identity: | 130 | 
| Alignm E-value: | 2e-24 | 
| Alignm gaps (pig, cow): | 57, 76 | 
| Conread position: | 349-525 | 
| Cow position: | chr3:28908348-28908171 (view UCSC Genome Browser custom track) | 
| Alignm length: | 180 | 
| Alignm identity: | 133 | 
| Alignm E-value: | 3e-27 | 
| Alignm gaps (pig, cow): | 58, 40 | 
| Conread position: | 349-525 | 
| Cow position: | chr3:31047097-31046920 (view UCSC Genome Browser custom track) | 
| Alignm length: | 180 | 
| Alignm identity: | 127 | 
| Alignm E-value: | 1e-21 | 
| Alignm gaps (pig, cow): | 57, 102 | 
| Conread position: | 349-525 | 
| Cow position: | chr3:48241470-48241646 (view UCSC Genome Browser custom track) | 
| Alignm length: | 182 | 
| Alignm identity: | 138 | 
| Alignm E-value: | 3e-28 | 
| Alignm gaps (pig, cow): | 57, 117 | 
| Conread position: | 349-525 | 
| Cow position: | chr3:59473974-59474154 (view UCSC Genome Browser custom track) | 
| Alignm length: | 181 | 
| Alignm identity: | 128 | 
| Alignm E-value: | 5e-23 | 
| Alignm gaps (pig, cow): | 55, 0 | 
| Conread position: | 349-525 | 
| Cow position: | chr3:66609989-66609812 (view UCSC Genome Browser custom track) | 
| Alignm length: | 180 | 
| Alignm identity: | 131 | 
| Alignm E-value: | 7e-26 | 
| Alignm gaps (pig, cow): | 55, 139 | 
| Conread position: | 349-525 | 
| Cow position: | chr3:67704396-67704578 (view UCSC Genome Browser custom track) | 
| Alignm length: | 183 | 
| Alignm identity: | 131 | 
| Alignm E-value: | 2e-23 | 
| Alignm gaps (pig, cow): | 55, 0 | 
| Conread position: | 349-525 | 
| Cow position: | chr3:72675946-72676123 (view UCSC Genome Browser custom track) | 
| Alignm length: | 179 | 
| Alignm identity: | 126 | 
| Alignm E-value: | 5e-23 | 
| Alignm gaps (pig, cow): | 57, 96 | 
| Conread position: | 349-525 | 
| Cow position: | chr3:73708902-73709079 (view UCSC Genome Browser custom track) | 
| Alignm length: | 180 | 
| Alignm identity: | 133 | 
| Alignm E-value: | 3e-27 | 
| Alignm gaps (pig, cow): | 55, 43 | 
| Conread position: | 349-525 | 
| Cow position: | chr3:75570594-75570420 (view UCSC Genome Browser custom track) | 
| Alignm length: | 182 | 
| Alignm identity: | 136 | 
| Alignm E-value: | 2e-24 | 
| Alignm gaps (pig, cow): | 15, 59 | 
| Conread position: | 349-525 | 
| Cow position: | chr3:82461031-82461211 (view UCSC Genome Browser custom track) | 
| Alignm length: | 181 | 
| Alignm identity: | 126 | 
| Alignm E-value: | 4e-21 | 
| Alignm gaps (pig, cow): | 11, 0 | 
| Conread position: | 351-470 | 
| Cow position: | chr3:78894467-78894348 (view UCSC Genome Browser custom track) | 
| Alignm length: | 120 | 
| Alignm identity: | 94 | 
| Alignm E-value: | 5e-23 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 351-525 | 
| Cow position: | chr3:46901054-46901231 (view UCSC Genome Browser custom track) | 
| Alignm length: | 182 | 
| Alignm identity: | 135 | 
| Alignm E-value: | 2e-24 | 
| Alignm gaps (pig, cow): | 56, 17 | 
| Conread position: | 351-525 | 
| Cow position: | chr3:67520316-67520134 (view UCSC Genome Browser custom track) | 
| Alignm length: | 183 | 
| Alignm identity: | 131 | 
| Alignm E-value: | 1e-21 | 
| Alignm gaps (pig, cow): | 56, 0 | 
| Conread position: | 351-525 | 
| Cow position: | chr3:71497286-71497106 (view UCSC Genome Browser custom track) | 
| Alignm length: | 183 | 
| Alignm identity: | 135 | 
| Alignm E-value: | 5e-24 | 
| Alignm gaps (pig, cow): | 56, 38 | 
| Conread position: | 352-484 | 
| Cow position: | chr3:25059935-25060071 (view UCSC Genome Browser custom track) | 
| Alignm length: | 137 | 
| Alignm identity: | 105 | 
| Alignm E-value: | 4e-22 | 
| Alignm gaps (pig, cow): | 54, 0 | 
| Conread position: | 352-521 | 
| Cow position: | chr3:61840133-61840303 (view UCSC Genome Browser custom track) | 
| Alignm length: | 175 | 
| Alignm identity: | 128 | 
| Alignm E-value: | 5e-23 | 
| Alignm gaps (pig, cow): | 54, 151 | 
| Conread position: | 352-525 | 
| Cow position: | chr3:2506619-2506446 (view UCSC Genome Browser custom track) | 
| Alignm length: | 178 | 
| Alignm identity: | 135 | 
| Alignm E-value: | 9e-29 | 
| Alignm gaps (pig, cow): | 54, 89 | 
| Conread position: | 352-525 | 
| Cow position: | chr3:17235352-17235179 (view UCSC Genome Browser custom track) | 
| Alignm length: | 178 | 
| Alignm identity: | 131 | 
| Alignm E-value: | 6e-25 | 
| Alignm gaps (pig, cow): | 55, 33 | 
| Conread position: | 356-476 | 
| Cow position: | chr3:61024442-61024318 (view UCSC Genome Browser custom track) | 
| Alignm length: | 125 | 
| Alignm identity: | 99 | 
| Alignm E-value: | 4e-22 | 
| Alignm gaps (pig, cow): | 49, 0 | 
| Conread position: | 356-496 | 
| Cow position: | chr3:77581970-77582112 (view UCSC Genome Browser custom track) | 
| Alignm length: | 143 | 
| Alignm identity: | 109 | 
| Alignm E-value: | 6e-25 | 
| Alignm gaps (pig, cow): | 51, 0 | 
| Conread position: | 356-519 | 
| Cow position: | chr3:39328256-39328426 (view UCSC Genome Browser custom track) | 
| Alignm length: | 171 | 
| Alignm identity: | 125 | 
| Alignm E-value: | 1e-22 | 
| Alignm gaps (pig, cow): | 50, 0 | 
| Conread position: | 356-519 | 
| Cow position: | chr3:44101833-44101995 (view UCSC Genome Browser custom track) | 
| Alignm length: | 167 | 
| Alignm identity: | 123 | 
| Alignm E-value: | 4e-22 | 
| Alignm gaps (pig, cow): | 50, 9 | 
| Conread position: | 356-521 | 
| Cow position: | chr3:37041275-37041447 (view UCSC Genome Browser custom track) | 
| Alignm length: | 173 | 
| Alignm identity: | 123 | 
| Alignm E-value: | 4e-21 | 
| Alignm gaps (pig, cow): | 51, 0 | 
| Conread position: | 356-521 | 
| Cow position: | chr3:62046523-62046692 (view UCSC Genome Browser custom track) | 
| Alignm length: | 171 | 
| Alignm identity: | 124 | 
| Alignm E-value: | 4e-22 | 
| Alignm gaps (pig, cow): | 86, 105 | 
| Conread position: | 356-524 | 
| Cow position: | chr3:43726938-43727110 (view UCSC Genome Browser custom track) | 
| Alignm length: | 174 | 
| Alignm identity: | 129 | 
| Alignm E-value: | 2e-26 | 
| Alignm gaps (pig, cow): | 51, 29 | 
| Conread position: | 356-524 | 
| Cow position: | chr3:63269083-63269254 (view UCSC Genome Browser custom track) | 
| Alignm length: | 172 | 
| Alignm identity: | 127 | 
| Alignm E-value: | 3e-27 | 
| Alignm gaps (pig, cow): | 51, 0 | 
| Conread position: | 356-524 | 
| Cow position: | chr3:73394982-73395147 (view UCSC Genome Browser custom track) | 
| Alignm length: | 171 | 
| Alignm identity: | 126 | 
| Alignm E-value: | 5e-24 | 
| Alignm gaps (pig, cow): | 51, 81 | 
| Conread position: | 356-525 | 
| Cow position: | chr3:3032266-3032439 (view UCSC Genome Browser custom track) | 
| Alignm length: | 176 | 
| Alignm identity: | 127 | 
| Alignm E-value: | 4e-21 | 
| Alignm gaps (pig, cow): | 49, 147 | 
| Conread position: | 356-525 | 
| Cow position: | chr3:4050055-4050225 (view UCSC Genome Browser custom track) | 
| Alignm length: | 174 | 
| Alignm identity: | 126 | 
| Alignm E-value: | 4e-22 | 
| Alignm gaps (pig, cow): | 51, 117 | 
| Conread position: | 356-525 | 
| Cow position: | chr3:5097067-5097239 (view UCSC Genome Browser custom track) | 
| Alignm length: | 173 | 
| Alignm identity: | 134 | 
| Alignm E-value: | 2e-33 | 
| Alignm gaps (pig, cow): | 51, 0 | 
| Conread position: | 356-525 | 
| Cow position: | chr3:5365538-5365709 (view UCSC Genome Browser custom track) | 
| Alignm length: | 172 | 
| Alignm identity: | 121 | 
| Alignm E-value: | 1e-22 | 
| Alignm gaps (pig, cow): | 53, 0 | 
| Conread position: | 356-525 | 
| Cow position: | chr3:11711822-11711997 (view UCSC Genome Browser custom track) | 
| Alignm length: | 176 | 
| Alignm identity: | 129 | 
| Alignm E-value: | 6e-25 | 
| Alignm gaps (pig, cow): | 48, 0 | 
| Conread position: | 356-525 | 
| Cow position: | chr3:26920770-26920940 (view UCSC Genome Browser custom track) | 
| Alignm length: | 172 | 
| Alignm identity: | 126 | 
| Alignm E-value: | 7e-26 | 
| Alignm gaps (pig, cow): | 84, 120 | 
| Conread position: | 356-525 | 
| Cow position: | chr3:30179942-30180118 (view UCSC Genome Browser custom track) | 
| Alignm length: | 177 | 
| Alignm identity: | 128 | 
| Alignm E-value: | 1e-22 | 
| Alignm gaps (pig, cow): | 50, 0 | 
| Conread position: | 356-525 | 
| Cow position: | chr3:34669866-34669701 (view UCSC Genome Browser custom track) | 
| Alignm length: | 172 | 
| Alignm identity: | 125 | 
| Alignm E-value: | 1e-22 | 
| Alignm gaps (pig, cow): | 51, 123 | 
| Conread position: | 356-525 | 
| Cow position: | chr3:39171622-39171454 (view UCSC Genome Browser custom track) | 
| Alignm length: | 175 | 
| Alignm identity: | 135 | 
| Alignm E-value: | 3e-28 | 
| Alignm gaps (pig, cow): | 50, 120 | 
| Conread position: | 356-525 | 
| Cow position: | chr3:48252745-48252917 (view UCSC Genome Browser custom track) | 
| Alignm length: | 175 | 
| Alignm identity: | 127 | 
| Alignm E-value: | 5e-23 | 
| Alignm gaps (pig, cow): | 50, 66 | 
| Conread position: | 356-525 | 
| Cow position: | chr3:51578460-51578289 (view UCSC Genome Browser custom track) | 
| Alignm length: | 174 | 
| Alignm identity: | 128 | 
| Alignm E-value: | 2e-25 | 
| Alignm gaps (pig, cow): | 50, 93 | 
| Conread position: | 356-525 | 
| Cow position: | chr3:52863323-52863152 (view UCSC Genome Browser custom track) | 
| Alignm length: | 173 | 
| Alignm identity: | 125 | 
| Alignm E-value: | 5e-24 | 
| Alignm gaps (pig, cow): | 50, 97 | 
| Conread position: | 356-525 | 
| Cow position: | chr3:54100860-54100694 (view UCSC Genome Browser custom track) | 
| Alignm length: | 172 | 
| Alignm identity: | 126 | 
| Alignm E-value: | 2e-23 | 
| Alignm gaps (pig, cow): | 51, 86 | 
| Conread position: | 356-525 | 
| Cow position: | chr3:55819611-55819790 (view UCSC Genome Browser custom track) | 
| Alignm length: | 180 | 
| Alignm identity: | 130 | 
| Alignm E-value: | 1e-22 | 
| Alignm gaps (pig, cow): | 50, 0 | 
| Conread position: | 356-525 | 
| Cow position: | chr3:55970367-55970539 (view UCSC Genome Browser custom track) | 
| Alignm length: | 173 | 
| Alignm identity: | 124 | 
| Alignm E-value: | 2e-23 | 
| Alignm gaps (pig, cow): | 49, 0 | 
| Conread position: | 356-525 | 
| Cow position: | chr3:57624326-57624496 (view UCSC Genome Browser custom track) | 
| Alignm length: | 172 | 
| Alignm identity: | 131 | 
| Alignm E-value: | 4e-31 | 
| Alignm gaps (pig, cow): | 51, 20 | 
| Conread position: | 356-525 | 
| Cow position: | chr3:59884211-59884037 (view UCSC Genome Browser custom track) | 
| Alignm length: | 175 | 
| Alignm identity: | 132 | 
| Alignm E-value: | 1e-29 | 
| Alignm gaps (pig, cow): | 51, 0 | 
| Conread position: | 356-525 | 
| Cow position: | chr3:65969022-65969199 (view UCSC Genome Browser custom track) | 
| Alignm length: | 178 | 
| Alignm identity: | 128 | 
| Alignm E-value: | 1e-22 | 
| Alignm gaps (pig, cow): | 48, 0 | 
| Conread position: | 356-525 | 
| Cow position: | chr3:68586881-68587054 (view UCSC Genome Browser custom track) | 
| Alignm length: | 175 | 
| Alignm identity: | 126 | 
| Alignm E-value: | 4e-22 | 
| Alignm gaps (pig, cow): | 50, 163 | 
| Conread position: | 356-525 | 
| Cow position: | chr3:73820509-73820337 (view UCSC Genome Browser custom track) | 
| Alignm length: | 174 | 
| Alignm identity: | 132 | 
| Alignm E-value: | 3e-29 | 
| Alignm gaps (pig, cow): | 51, 112 | 
| Conread position: | 356-525 | 
| Cow position: | chr3:74878728-74878557 (view UCSC Genome Browser custom track) | 
| Alignm length: | 173 | 
| Alignm identity: | 130 | 
| Alignm E-value: | 9e-29 | 
| Alignm gaps (pig, cow): | 51, 94 | 
| Conread position: | 356-525 | 
| Cow position: | chr3:76268118-76267943 (view UCSC Genome Browser custom track) | 
| Alignm length: | 176 | 
| Alignm identity: | 132 | 
| Alignm E-value: | 3e-28 | 
| Alignm gaps (pig, cow): | 51, 0 | 
| Conread position: | 356-525 | 
| Cow position: | chr3:78896510-78896679 (view UCSC Genome Browser custom track) | 
| Alignm length: | 170 | 
| Alignm identity: | 124 | 
| Alignm E-value: | 8e-28 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 356-525 | 
| Cow position: | chr3:79292691-79292860 (view UCSC Genome Browser custom track) | 
| Alignm length: | 172 | 
| Alignm identity: | 125 | 
| Alignm E-value: | 5e-24 | 
| Alignm gaps (pig, cow): | 32, 76 | 
| Conread position: | 356-525 | 
| Cow position: | chr3:80053678-80053510 (view UCSC Genome Browser custom track) | 
| Alignm length: | 173 | 
| Alignm identity: | 125 | 
| Alignm E-value: | 4e-22 | 
| Alignm gaps (pig, cow): | 50, 96 | 
| Conread position: | 356-525 | 
| Cow position: | chr3:80468814-80468644 (view UCSC Genome Browser custom track) | 
| Alignm length: | 173 | 
| Alignm identity: | 128 | 
| Alignm E-value: | 7e-26 | 
| Alignm gaps (pig, cow): | 51, 37 | 
| Conread position: | 356-525 | 
| Cow position: | chr3:80581525-80581687 (view UCSC Genome Browser custom track) | 
| Alignm length: | 172 | 
| Alignm identity: | 128 | 
| Alignm E-value: | 5e-23 | 
| Alignm gaps (pig, cow): | 48, 88 | 
| Conread position: | 356-525 | 
| Cow position: | chr3:80953507-80953679 (view UCSC Genome Browser custom track) | 
| Alignm length: | 174 | 
| Alignm identity: | 124 | 
| Alignm E-value: | 4e-22 | 
| Alignm gaps (pig, cow): | 49, 168 | 
| Conread position: | 357-499 | 
| Cow position: | chr3:59514966-59515110 (view UCSC Genome Browser custom track) | 
| Alignm length: | 146 | 
| Alignm identity: | 109 | 
| Alignm E-value: | 1e-21 | 
| Alignm gaps (pig, cow): | 50, 94 | 
| Conread position: | 357-515 | 
| Cow position: | chr3:83490948-83491108 (view UCSC Genome Browser custom track) | 
| Alignm length: | 163 | 
| Alignm identity: | 119 | 
| Alignm E-value: | 4e-22 | 
| Alignm gaps (pig, cow): | 49, 82 | 
| Conread position: | 357-519 | 
| Cow position: | chr3:12712056-12711889 (view UCSC Genome Browser custom track) | 
| Alignm length: | 168 | 
| Alignm identity: | 130 | 
| Alignm E-value: | 1e-30 | 
| Alignm gaps (pig, cow): | 50, 0 | 
| Conread position: | 357-525 | 
| Cow position: | chr3:17895708-17895881 (view UCSC Genome Browser custom track) | 
| Alignm length: | 176 | 
| Alignm identity: | 130 | 
| Alignm E-value: | 2e-23 | 
| Alignm gaps (pig, cow): | 82, 45 | 
| Conread position: | 357-525 | 
| Cow position: | chr3:39661588-39661425 (view UCSC Genome Browser custom track) | 
| Alignm length: | 169 | 
| Alignm identity: | 123 | 
| Alignm E-value: | 5e-24 | 
| Alignm gaps (pig, cow): | 45, 0 | 
| Conread position: | 357-525 | 
| Cow position: | chr3:67929399-67929228 (view UCSC Genome Browser custom track) | 
| Alignm length: | 172 | 
| Alignm identity: | 122 | 
| Alignm E-value: | 1e-22 | 
| Alignm gaps (pig, cow): | 49, 0 | 
| Conread position: | 358-525 | 
| Cow position: | chr3:70334832-70334663 (view UCSC Genome Browser custom track) | 
| Alignm length: | 170 | 
| Alignm identity: | 124 | 
| Alignm E-value: | 2e-26 | 
| Alignm gaps (pig, cow): | 49, 0 | 
| Conread position: | 361-506 | 
| Cow position: | chr3:9843453-9843601 (view UCSC Genome Browser custom track) | 
| Alignm length: | 149 | 
| Alignm identity: | 110 | 
| Alignm E-value: | 1e-21 | 
| Alignm gaps (pig, cow): | 62, 0 | 
| Conread position: | 361-525 | 
| Cow position: | chr3:46541962-46541797 (view UCSC Genome Browser custom track) | 
| Alignm length: | 167 | 
| Alignm identity: | 119 | 
| Alignm E-value: | 4e-22 | 
| Alignm gaps (pig, cow): | 46, 59 | 
| Conread position: | 361-525 | 
| Cow position: | chr3:53270695-53270862 (view UCSC Genome Browser custom track) | 
| Alignm length: | 168 | 
| Alignm identity: | 119 | 
| Alignm E-value: | 1e-21 | 
| Alignm gaps (pig, cow): | 45, 0 | 
| Conread position: | 364-524 | 
| Cow position: | chr3:63179731-63179888 (view UCSC Genome Browser custom track) | 
| Alignm length: | 163 | 
| Alignm identity: | 119 | 
| Alignm E-value: | 1e-21 | 
| Alignm gaps (pig, cow): | 42, 59 | 
| Conread position: | 364-525 | 
| Cow position: | chr3:22509895-22510059 (view UCSC Genome Browser custom track) | 
| Alignm length: | 165 | 
| Alignm identity: | 118 | 
| Alignm E-value: | 4e-22 | 
| Alignm gaps (pig, cow): | 42, 0 | 
| Conread position: | 364-525 | 
| Cow position: | chr3:84175957-84175791 (view UCSC Genome Browser custom track) | 
| Alignm length: | 167 | 
| Alignm identity: | 120 | 
| Alignm E-value: | 4e-22 | 
| Alignm gaps (pig, cow): | 40, 0 | 
| Conread position: | 365-525 | 
| Cow position: | chr3:23445023-23444856 (view UCSC Genome Browser custom track) | 
| Alignm length: | 170 | 
| Alignm identity: | 126 | 
| Alignm E-value: | 4e-22 | 
| Alignm gaps (pig, cow): | 72, 42 | 
| Conread position: | 368-525 | 
| Cow position: | chr3:65058576-65058730 (view UCSC Genome Browser custom track) | 
| Alignm length: | 160 | 
| Alignm identity: | 121 | 
| Alignm E-value: | 5e-24 | 
| Alignm gaps (pig, cow): | 38, 21 | 
| Conread position: | 378-525 | 
| Cow position: | chr3:72504016-72503864 (view UCSC Genome Browser custom track) | 
| Alignm length: | 153 | 
| Alignm identity: | 114 | 
| Alignm E-value: | 1e-22 | 
| Alignm gaps (pig, cow): | 28, 0 | 
| Conread position: | 379-525 | 
| Cow position: | chr3:74846826-74846677 (view UCSC Genome Browser custom track) | 
| Alignm length: | 151 | 
| Alignm identity: | 112 | 
| Alignm E-value: | 4e-21 | 
| Alignm gaps (pig, cow): | 63, 80 | 
| Conread position: | 387-525 | 
| Cow position: | chr3:65019974-65019833 (view UCSC Genome Browser custom track) | 
| Alignm length: | 142 | 
| Alignm identity: | 108 | 
| Alignm E-value: | 2e-23 | 
| Alignm gaps (pig, cow): | 20, 0 | 
Show alignments to all cow chromosomes.
