Cow genome map

Conread name: rcki31_k1.y1

Conread position: 337-519
Cow position: chr7:40894447-40894634 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 131
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 30, 0

Conread position: 337-525
Cow position: chr7:19230603-19230417 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 136
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 69, 54

Conread position: 338-525
Cow position: chr7:54513502-54513307 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 138
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 24, 0

Conread position: 341-525
Cow position: chr7:40308604-40308421 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 132
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 65, 102

Conread position: 342-484
Cow position: chr7:31881865-31882010 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 110
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 60, 0

Conread position: 343-484
Cow position: chr7:48020334-48020477 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 111
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 64, 0

Conread position: 343-499
Cow position: chr7:18253415-18253573 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 118
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 64, 106

Conread position: 348-464
Cow position: chr7:23616049-23615932 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 97
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 5, 96

Conread position: 348-472
Cow position: chr7:24564696-24564572 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 99
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 11, 65

Conread position: 348-525
Cow position: chr7:36774284-36774466 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 135
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 14, 54

Conread position: 349-472
Cow position: chr7:35652155-35652027 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 101
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 56, 0

Conread position: 349-495
Cow position: chr7:42894365-42894512 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 111
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 57, 81

Conread position: 349-521
Cow position: chr7:48721983-48721809 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 132
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 60, 155

Conread position: 349-524
Cow position: chr7:23636626-23636800 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 133
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 58, 150

Conread position: 349-525
Cow position: chr7:2579323-2579139 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 133
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 11, 0

Conread position: 349-525
Cow position: chr7:3336632-3336452 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 133
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 58, 0

Conread position: 349-525
Cow position: chr7:13963123-13963309 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 142
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 58, 0

Conread position: 349-525
Cow position: chr7:14524399-14524577 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 129
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 62, 100

Conread position: 349-525
Cow position: chr7:19267450-19267272 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 137
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 13, 137

Conread position: 349-525
Cow position: chr7:27283602-27283772 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 129
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 57, 92

Conread position: 349-525
Cow position: chr7:33697875-33698053 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 127
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 58, 72

Conread position: 349-525
Cow position: chr7:45927238-45927067 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 130
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 99, 58

Conread position: 350-517
Cow position: chr7:51039348-51039522 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 133
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 57, 0

Conread position: 352-519
Cow position: chr7:39904016-39904189 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 124
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 10, 0

Conread position: 355-525
Cow position: chr7:39094000-39093828 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 120
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 80, 0

Conread position: 356-470
Cow position: chr7:2896691-2896810 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 96
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 48, 0

Conread position: 356-496
Cow position: chr7:43055774-43055635 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 108
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 50, 80

Conread position: 356-509
Cow position: chr7:40303339-40303183 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 114
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 9, 0

Conread position: 356-519
Cow position: chr7:39518226-39518385 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 121
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 89, 42

Conread position: 356-519
Cow position: chr7:40051829-40051667 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 123
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 104, 0

Conread position: 356-519
Cow position: chr7:40067586-40067753 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 122
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 50, 0

Conread position: 356-519
Cow position: chr7:48406569-48406403 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 123
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 44, 0

Conread position: 356-521
Cow position: chr7:17756963-17757127 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 129
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 9, 83

Conread position: 356-523
Cow position: chr7:32372784-32372953 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 129
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 9, 135

Conread position: 356-525
Cow position: chr7:3311770-3311937 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 125
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 49, 133

Conread position: 356-525
Cow position: chr7:4129855-4129682 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 128
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 51, 25

Conread position: 356-525
Cow position: chr7:4582801-4582630 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 121
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 50, 0

Conread position: 356-525
Cow position: chr7:9193315-9193139 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 131
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 50, 8

Conread position: 356-525
Cow position: chr7:9800280-9800451 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 120
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 51, 0

Conread position: 356-525
Cow position: chr7:24220597-24220766 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 126
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 0, 0

Conread position: 356-525
Cow position: chr7:24460885-24461049 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 131
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 83, 0

Conread position: 356-525
Cow position: chr7:25512196-25512026 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 127
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 49, 100

Conread position: 356-525
Cow position: chr7:30932049-30931879 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 128
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 49, 147

Conread position: 356-525
Cow position: chr7:35286711-35286542 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 121
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 49, 84

Conread position: 356-525
Cow position: chr7:38060502-38060328 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 126
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 50, 0

Conread position: 356-525
Cow position: chr7:45592966-45593137 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 125
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 51, 93

Conread position: 356-525
Cow position: chr7:47931872-47931698 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 126
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 9, 0

Conread position: 356-525
Cow position: chr7:52776827-52776661 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 121
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 91, 37

Conread position: 356-525
Cow position: chr7:58923324-58923496 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 124
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 50, 0

Conread position: 356-525
Cow position: chr7:64135538-64135369 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 122
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 51, 87

Conread position: 357-472
Cow position: chr7:600262-600381 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 98
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 49, 0

Conread position: 357-496
Cow position: chr7:44589923-44589784 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 106
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 50, 88

Conread position: 357-521
Cow position: chr7:68315170-68315331 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 121
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 49, 91

Conread position: 357-524
Cow position: chr7:40425386-40425215 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 121
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 49, 0

Conread position: 357-525
Cow position: chr7:44986579-44986752 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 126
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 40, 0

Conread position: 357-525
Cow position: chr7:53097515-53097689 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 125
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 48, 0

Conread position: 357-525
Cow position: chr7:60547740-60547567 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 131
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 50, 0

Conread position: 357-525
Cow position: chr7:63679005-63679170 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 129
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 50, 142

Conread position: 358-525
Cow position: chr7:11869910-11869742 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 132
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 48, 133

Conread position: 358-525
Cow position: chr7:44454350-44454182 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 122
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 48, 81

Conread position: 361-509
Cow position: chr7:49783440-49783287 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 116
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 45, 0

Conread position: 361-525
Cow position: chr7:9136765-9136936 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 131
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 45, 0

Conread position: 361-525
Cow position: chr7:42244762-42244603 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 121
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 107, 77

Conread position: 364-520
Cow position: chr7:147346-147507 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 124
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 42, 116

Conread position: 364-521
Cow position: chr7:32079384-32079546 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 119
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 43, 0

Conread position: 364-522
Cow position: chr7:61790420-61790257 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 120
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 45, 0

Conread position: 364-524
Cow position: chr7:67873125-67873290 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 120
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 42, 0

Conread position: 364-525
Cow position: chr7:6058059-6058226 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 126
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 75, 0

Conread position: 364-525
Cow position: chr7:39164317-39164487 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 125
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 41, 0

Conread position: 365-524
Cow position: chr7:34412338-34412181 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 119
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 42, 123

Conread position: 365-525
Cow position: chr7:34223626-34223792 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 121
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 42, 0

Conread position: 365-525
Cow position: chr7:54054523-54054686 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 120
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 42, 131

Conread position: 368-484
Cow position: chr7:26861242-26861363 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 99
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 38, 0

Conread position: 368-521
Cow position: chr7:4811961-4812110 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 113
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 72, 0

Conread position: 368-525
Cow position: chr7:45158065-45158220 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 120
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 76, 34

Conread position: 369-524
Cow position: chr7:33719973-33720132 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 120
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 37, 0

Conread position: 369-525
Cow position: chr7:168729-168568 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 120
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 38, 0

Conread position: 370-525
Cow position: chr7:31694694-31694541 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 112
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 64, 0

Conread position: 378-525
Cow position: chr7:18947797-18947649 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 112
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 29, 71

Conread position: 382-525
Cow position: chr7:38429759-38429613 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 109
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 25, 0

Show alignments to all cow chromosomes.