Cow genome map

Conread name: rcki31_m16.y1

Conread position: 1-199
Cow position:
Alignm length: 212
Alignm identity: 153
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 75, 13

Conread position: 1-340
Cow position:
Alignm length: 352
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 47

Conread position: 1-362
Cow position:
Alignm length: 379
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 219

Conread position: 1-472
Cow position:
Alignm length: 493
Alignm identity: 383
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 284

Conread position: 1-504
Cow position:
Alignm length: 526
Alignm identity: 395
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 193

Conread position: 1-516
Cow position:
Alignm length: 530
Alignm identity: 374
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 280

Conread position: 1-525
Cow position:
Alignm length: 567
Alignm identity: 416
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 48

Conread position: 1-525
Cow position:
Alignm length: 546
Alignm identity: 409
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 284

Conread position: 1-525
Cow position:
Alignm length: 552
Alignm identity: 418
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 266

Conread position: 1-525
Cow position:
Alignm length: 546
Alignm identity: 426
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 284

Conread position: 1-525
Cow position:
Alignm length: 535
Alignm identity: 405
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 51

Conread position: 1-533
Cow position:
Alignm length: 549
Alignm identity: 407
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 278

Conread position: 1-558
Cow position:
Alignm length: 580
Alignm identity: 441
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 48

Conread position: 2-514
Cow position:
Alignm length: 532
Alignm identity: 397
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 111

Conread position: 5-248
Cow position:
Alignm length: 263
Alignm identity: 190
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 65, 25

Conread position: 5-425
Cow position:
Alignm length: 444
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 177

Conread position: 5-515
Cow position:
Alignm length: 526
Alignm identity: 383
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 141

Conread position: 5-525
Cow position:
Alignm length: 544
Alignm identity: 409
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 176

Conread position: 6-289
Cow position:
Alignm length: 301
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 279

Conread position: 6-335
Cow position:
Alignm length: 348
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 43

Conread position: 6-425
Cow position:
Alignm length: 438
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 32

Conread position: 6-478
Cow position:
Alignm length: 498
Alignm identity: 363
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 66

Conread position: 6-525
Cow position:
Alignm length: 543
Alignm identity: 375
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 40

Conread position: 6-525
Cow position:
Alignm length: 541
Alignm identity: 428
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 279

Conread position: 6-525
Cow position:
Alignm length: 531
Alignm identity: 405
Alignm E-value: 0
Alignm gaps (pig, cow): 145, 105

Conread position: 6-525
Cow position:
Alignm length: 533
Alignm identity: 417
Alignm E-value: 0
Alignm gaps (pig, cow): 117, 81

Conread position: 6-525
Cow position:
Alignm length: 537
Alignm identity: 397
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 36

Conread position: 6-525
Cow position:
Alignm length: 541
Alignm identity: 422
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 16

Conread position: 6-525
Cow position:
Alignm length: 540
Alignm identity: 419
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 263

Conread position: 6-525
Cow position:
Alignm length: 541
Alignm identity: 415
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 279

Conread position: 6-525
Cow position:
Alignm length: 536
Alignm identity: 400
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 240

Conread position: 6-525
Cow position:
Alignm length: 541
Alignm identity: 421
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 279

Conread position: 6-525
Cow position:
Alignm length: 525
Alignm identity: 364
Alignm E-value: 0
Alignm gaps (pig, cow): 342, 38

Conread position: 6-530
Cow position:
Alignm length: 542
Alignm identity: 409
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 279

Conread position: 7-349
Cow position:
Alignm length: 359
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 264

Conread position: 7-373
Cow position:
Alignm length: 392
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 285

Conread position: 7-399
Cow position:
Alignm length: 416
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 230

Conread position: 7-523
Cow position:
Alignm length: 538
Alignm identity: 417
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 54

Conread position: 7-525
Cow position:
Alignm length: 543
Alignm identity: 382
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 42

Conread position: 7-530
Cow position:
Alignm length: 546
Alignm identity: 420
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 279

Conread position: 7-543
Cow position:
Alignm length: 558
Alignm identity: 426
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 170

Conread position: 16-227
Cow position:
Alignm length: 231
Alignm identity: 169
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 59, 165

Conread position: 16-525
Cow position:
Alignm length: 527
Alignm identity: 418
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 56

Conread position: 23-392
Cow position:
Alignm length: 388
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 158

Conread position: 32-525
Cow position:
Alignm length: 512
Alignm identity: 383
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 250

Conread position: 76-525
Cow position:
Alignm length: 476
Alignm identity: 341
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 84

Conread position: 80-538
Cow position:
Alignm length: 478
Alignm identity: 375
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 94

Conread position: 81-315
Cow position:
Alignm length: 246
Alignm identity: 189
Alignm E-value: 7.00005e-41
Alignm gaps (pig, cow): 6, 14

Conread position: 92-522
Cow position:
Alignm length: 443
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 184

Conread position: 95-525
Cow position:
Alignm length: 446
Alignm identity: 343
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 87

Conread position: 120-525
Cow position:
Alignm length: 415
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 153

Conread position: 120-538
Cow position:
Alignm length: 438
Alignm identity: 290
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 189, 31

Conread position: 122-522
Cow position:
Alignm length: 412
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 47

Conread position: 151-538
Cow position:
Alignm length: 396
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 253, 12

Conread position: 163-549
Cow position:
Alignm length: 391
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 264, 105

Conread position: 164-364
Cow position:
Alignm length: 201
Alignm identity: 155
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 83, 0

Conread position: 164-525
Cow position:
Alignm length: 366
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 261, 54

Conread position: 165-525
Cow position:
Alignm length: 365
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 262, 103

Conread position: 172-449
Cow position:
Alignm length: 278
Alignm identity: 185
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 0

Conread position: 195-413
Cow position:
Alignm length: 222
Alignm identity: 163
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 143, 54

Conread position: 201-525
Cow position:
Alignm length: 329
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 224, 67

Conread position: 220-525
Cow position:
Alignm length: 311
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 16

Conread position: 246-525
Cow position:
Alignm length: 287
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 151, 22

Show alignments to all cow chromosomes.