Cow genome map

Conread name: rcki31_m16.y1

Conread position: 1-227
Cow position:
Alignm length: 236
Alignm identity: 167
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 74, 199

Conread position: 1-362
Cow position:
Alignm length: 381
Alignm identity: 267
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 70, 43

Conread position: 1-366
Cow position:
Alignm length: 383
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 284

Conread position: 1-387
Cow position:
Alignm length: 404
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 284

Conread position: 1-422
Cow position:
Alignm length: 428
Alignm identity: 264
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 73, 48

Conread position: 1-425
Cow position:
Alignm length: 444
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 24

Conread position: 1-440
Cow position:
Alignm length: 457
Alignm identity: 360
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 183

Conread position: 1-486
Cow position:
Alignm length: 507
Alignm identity: 394
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 284

Conread position: 1-490
Cow position:
Alignm length: 503
Alignm identity: 389
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 171

Conread position: 1-522
Cow position:
Alignm length: 549
Alignm identity: 415
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 70

Conread position: 1-522
Cow position:
Alignm length: 537
Alignm identity: 420
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 279

Conread position: 1-525
Cow position:
Alignm length: 547
Alignm identity: 416
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 180

Conread position: 1-525
Cow position:
Alignm length: 554
Alignm identity: 407
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 55

Conread position: 1-525
Cow position:
Alignm length: 550
Alignm identity: 428
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 183

Conread position: 1-525
Cow position:
Alignm length: 543
Alignm identity: 427
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 275

Conread position: 1-525
Cow position:
Alignm length: 543
Alignm identity: 427
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 275

Conread position: 1-525
Cow position:
Alignm length: 550
Alignm identity: 419
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 283

Conread position: 1-525
Cow position:
Alignm length: 549
Alignm identity: 422
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 282

Conread position: 1-525
Cow position:
Alignm length: 547
Alignm identity: 425
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 285

Conread position: 1-525
Cow position:
Alignm length: 542
Alignm identity: 410
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 224

Conread position: 1-525
Cow position:
Alignm length: 550
Alignm identity: 420
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 285

Conread position: 1-529
Cow position:
Alignm length: 550
Alignm identity: 424
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 284

Conread position: 2-389
Cow position:
Alignm length: 405
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 283

Conread position: 2-523
Cow position:
Alignm length: 548
Alignm identity: 392
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 16

Conread position: 5-202
Cow position:
Alignm length: 204
Alignm identity: 145
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 142, 28

Conread position: 6-148
Cow position:
Alignm length: 155
Alignm identity: 120
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 69, 0

Conread position: 6-266
Cow position:
Alignm length: 273
Alignm identity: 190
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 16, 33

Conread position: 6-293
Cow position:
Alignm length: 291
Alignm identity: 210
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 166

Conread position: 6-483
Cow position:
Alignm length: 492
Alignm identity: 374
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 9

Conread position: 6-522
Cow position:
Alignm length: 534
Alignm identity: 390
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 39

Conread position: 6-525
Cow position:
Alignm length: 541
Alignm identity: 412
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 52

Conread position: 6-525
Cow position:
Alignm length: 541
Alignm identity: 420
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 213

Conread position: 6-525
Cow position:
Alignm length: 542
Alignm identity: 432
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 280

Conread position: 6-525
Cow position:
Alignm length: 547
Alignm identity: 409
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 285

Conread position: 6-525
Cow position:
Alignm length: 538
Alignm identity: 401
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 9

Conread position: 6-525
Cow position:
Alignm length: 539
Alignm identity: 422
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 13

Conread position: 6-525
Cow position:
Alignm length: 524
Alignm identity: 402
Alignm E-value: 0
Alignm gaps (pig, cow): 419, 70

Conread position: 7-349
Cow position:
Alignm length: 369
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 24

Conread position: 7-525
Cow position:
Alignm length: 538
Alignm identity: 392
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 187

Conread position: 7-525
Cow position:
Alignm length: 532
Alignm identity: 424
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 91

Conread position: 7-525
Cow position:
Alignm length: 536
Alignm identity: 397
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 24

Conread position: 9-238
Cow position:
Alignm length: 237
Alignm identity: 157
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 66, 99

Conread position: 9-365
Cow position:
Alignm length: 374
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 22

Conread position: 13-515
Cow position:
Alignm length: 518
Alignm identity: 395
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 22

Conread position: 13-529
Cow position:
Alignm length: 539
Alignm identity: 396
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 272

Conread position: 14-522
Cow position:
Alignm length: 531
Alignm identity: 354
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 158

Conread position: 22-496
Cow position:
Alignm length: 496
Alignm identity: 386
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 263

Conread position: 22-523
Cow position:
Alignm length: 518
Alignm identity: 371
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 26

Conread position: 29-276
Cow position:
Alignm length: 259
Alignm identity: 195
Alignm E-value: 8.99634e-43
Alignm gaps (pig, cow): 44, 76

Conread position: 29-448
Cow position:
Alignm length: 440
Alignm identity: 339
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 255

Conread position: 76-450
Cow position:
Alignm length: 393
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 135

Conread position: 80-525
Cow position:
Alignm length: 461
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 93

Conread position: 80-525
Cow position:
Alignm length: 456
Alignm identity: 344
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 159

Conread position: 82-507
Cow position:
Alignm length: 439
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 29

Conread position: 87-309
Cow position:
Alignm length: 233
Alignm identity: 180
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 37, 86

Conread position: 87-522
Cow position:
Alignm length: 448
Alignm identity: 345
Alignm E-value: 0
Alignm gaps (pig, cow): 6, 84

Conread position: 102-549
Cow position:
Alignm length: 461
Alignm identity: 352
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 158

Conread position: 120-313
Cow position:
Alignm length: 201
Alignm identity: 159
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 34, 49

Conread position: 120-525
Cow position:
Alignm length: 415
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 101

Conread position: 120-525
Cow position:
Alignm length: 416
Alignm identity: 334
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 153

Conread position: 151-320
Cow position:
Alignm length: 171
Alignm identity: 136
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 144, 12

Conread position: 153-445
Cow position:
Alignm length: 297
Alignm identity: 218
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 272, 16

Conread position: 160-413
Cow position:
Alignm length: 257
Alignm identity: 190
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 190, 92

Conread position: 163-317
Cow position:
Alignm length: 155
Alignm identity: 128
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 105, 0

Conread position: 165-523
Cow position:
Alignm length: 364
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 69

Conread position: 189-320
Cow position:
Alignm length: 132
Alignm identity: 105
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 63, 0

Conread position: 195-405
Cow position:
Alignm length: 211
Alignm identity: 161
Alignm E-value: 9e-33
Alignm gaps (pig, cow): 57, 0

Conread position: 268-524
Cow position:
Alignm length: 261
Alignm identity: 211
Alignm E-value: 0
Alignm gaps (pig, cow): 159, 13

Show alignments to all cow chromosomes.