Cow genome map
Conread name: | rcki31_m16.y1 |
Conread position: | 1-227 |
Cow position: | chr17:2534357-2534125 (view UCSC Genome Browser custom track) |
Alignm length: | 236 |
Alignm identity: | 167 |
Alignm E-value: | 2e-29 |
Alignm gaps (pig, cow): | 74, 199 |
Conread position: | 1-362 |
Cow position: | chr17:7615240-7615613 (view UCSC Genome Browser custom track) |
Alignm length: | 381 |
Alignm identity: | 267 |
Alignm E-value: | 4.2039e-45 |
Alignm gaps (pig, cow): | 70, 43 |
Conread position: | 1-366 |
Cow position: | chr17:21716913-21716532 (view UCSC Genome Browser custom track) |
Alignm length: | 383 |
Alignm identity: | 293 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 74, 284 |
Conread position: | 1-387 |
Cow position: | chr17:36284718-36284319 (view UCSC Genome Browser custom track) |
Alignm length: | 404 |
Alignm identity: | 303 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 74, 284 |
Conread position: | 1-422 |
Cow position: | chr17:4676858-4676444 (view UCSC Genome Browser custom track) |
Alignm length: | 428 |
Alignm identity: | 264 |
Alignm E-value: | 1e-23 |
Alignm gaps (pig, cow): | 73, 48 |
Conread position: | 1-425 |
Cow position: | chr17:18123226-18123657 (view UCSC Genome Browser custom track) |
Alignm length: | 444 |
Alignm identity: | 328 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 53, 24 |
Conread position: | 1-440 |
Cow position: | chr17:29471881-29471434 (view UCSC Genome Browser custom track) |
Alignm length: | 457 |
Alignm identity: | 360 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 70, 183 |
Conread position: | 1-486 |
Cow position: | chr17:16904030-16903534 (view UCSC Genome Browser custom track) |
Alignm length: | 507 |
Alignm identity: | 394 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 76, 284 |
Conread position: | 1-490 |
Cow position: | chr17:2177421-2176925 (view UCSC Genome Browser custom track) |
Alignm length: | 503 |
Alignm identity: | 389 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 71, 171 |
Conread position: | 1-522 |
Cow position: | chr17:14249658-14250200 (view UCSC Genome Browser custom track) |
Alignm length: | 549 |
Alignm identity: | 415 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 91, 70 |
Conread position: | 1-522 |
Cow position: | chr17:17221759-17221229 (view UCSC Genome Browser custom track) |
Alignm length: | 537 |
Alignm identity: | 420 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 72, 279 |
Conread position: | 1-525 |
Cow position: | chr17:184598-184057 (view UCSC Genome Browser custom track) |
Alignm length: | 547 |
Alignm identity: | 416 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 74, 180 |
Conread position: | 1-525 |
Cow position: | chr17:1456929-1457473 (view UCSC Genome Browser custom track) |
Alignm length: | 554 |
Alignm identity: | 407 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 74, 55 |
Conread position: | 1-525 |
Cow position: | chr17:4211383-4210839 (view UCSC Genome Browser custom track) |
Alignm length: | 550 |
Alignm identity: | 428 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 69, 183 |
Conread position: | 1-525 |
Cow position: | chr17:5638441-5638979 (view UCSC Genome Browser custom track) |
Alignm length: | 543 |
Alignm identity: | 427 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 74, 275 |
Conread position: | 1-525 |
Cow position: | chr17:5672069-5672607 (view UCSC Genome Browser custom track) |
Alignm length: | 543 |
Alignm identity: | 427 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 74, 275 |
Conread position: | 1-525 |
Cow position: | chr17:6071990-6071445 (view UCSC Genome Browser custom track) |
Alignm length: | 550 |
Alignm identity: | 419 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 74, 283 |
Conread position: | 1-525 |
Cow position: | chr17:15854184-15853640 (view UCSC Genome Browser custom track) |
Alignm length: | 549 |
Alignm identity: | 422 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 78, 282 |
Conread position: | 1-525 |
Cow position: | chr17:16447030-16447568 (view UCSC Genome Browser custom track) |
Alignm length: | 547 |
Alignm identity: | 425 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 74, 285 |
Conread position: | 1-525 |
Cow position: | chr17:20093714-20094246 (view UCSC Genome Browser custom track) |
Alignm length: | 542 |
Alignm identity: | 410 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 74, 224 |
Conread position: | 1-525 |
Cow position: | chr17:23320969-23321510 (view UCSC Genome Browser custom track) |
Alignm length: | 550 |
Alignm identity: | 420 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 74, 285 |
Conread position: | 1-529 |
Cow position: | chr17:43471140-43471684 (view UCSC Genome Browser custom track) |
Alignm length: | 550 |
Alignm identity: | 424 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 74, 284 |
Conread position: | 2-389 |
Cow position: | chr17:2201747-2201347 (view UCSC Genome Browser custom track) |
Alignm length: | 405 |
Alignm identity: | 305 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 75, 283 |
Conread position: | 2-523 |
Cow position: | chr17:1883690-1883171 (view UCSC Genome Browser custom track) |
Alignm length: | 548 |
Alignm identity: | 392 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 73, 16 |
Conread position: | 5-202 |
Cow position: | chr17:28539437-28539240 (view UCSC Genome Browser custom track) |
Alignm length: | 204 |
Alignm identity: | 145 |
Alignm E-value: | 1e-23 |
Alignm gaps (pig, cow): | 142, 28 |
Conread position: | 6-148 |
Cow position: | chr17:38617084-38616930 (view UCSC Genome Browser custom track) |
Alignm length: | 155 |
Alignm identity: | 120 |
Alignm E-value: | 1e-23 |
Alignm gaps (pig, cow): | 69, 0 |
Conread position: | 6-266 |
Cow position: | chr17:23884364-23884627 (view UCSC Genome Browser custom track) |
Alignm length: | 273 |
Alignm identity: | 190 |
Alignm E-value: | 5e-27 |
Alignm gaps (pig, cow): | 16, 33 |
Conread position: | 6-293 |
Cow position: | chr17:25551263-25551551 (view UCSC Genome Browser custom track) |
Alignm length: | 291 |
Alignm identity: | 210 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 67, 166 |
Conread position: | 6-483 |
Cow position: | chr17:4635345-4635823 (view UCSC Genome Browser custom track) |
Alignm length: | 492 |
Alignm identity: | 374 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 69, 9 |
Conread position: | 6-522 |
Cow position: | chr17:2839458-2838945 (view UCSC Genome Browser custom track) |
Alignm length: | 534 |
Alignm identity: | 390 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 88, 39 |
Conread position: | 6-525 |
Cow position: | chr17:4063777-4063250 (view UCSC Genome Browser custom track) |
Alignm length: | 541 |
Alignm identity: | 412 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 7, 52 |
Conread position: | 6-525 |
Cow position: | chr17:6263300-6262766 (view UCSC Genome Browser custom track) |
Alignm length: | 541 |
Alignm identity: | 420 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 68, 213 |
Conread position: | 6-525 |
Cow position: | chr17:8223152-8222615 (view UCSC Genome Browser custom track) |
Alignm length: | 542 |
Alignm identity: | 432 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 38, 280 |
Conread position: | 6-525 |
Cow position: | chr17:14243278-14242740 (view UCSC Genome Browser custom track) |
Alignm length: | 547 |
Alignm identity: | 409 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 71, 285 |
Conread position: | 6-525 |
Cow position: | chr17:16869852-16870357 (view UCSC Genome Browser custom track) |
Alignm length: | 538 |
Alignm identity: | 401 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 69, 9 |
Conread position: | 6-525 |
Cow position: | chr17:24026540-24027073 (view UCSC Genome Browser custom track) |
Alignm length: | 539 |
Alignm identity: | 422 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 71, 13 |
Conread position: | 6-525 |
Cow position: | chr17:40811162-40810661 (view UCSC Genome Browser custom track) |
Alignm length: | 524 |
Alignm identity: | 402 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 419, 70 |
Conread position: | 7-349 |
Cow position: | chr17:36747077-36747434 (view UCSC Genome Browser custom track) |
Alignm length: | 369 |
Alignm identity: | 270 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 66, 24 |
Conread position: | 7-525 |
Cow position: | chr17:148353-147831 (view UCSC Genome Browser custom track) |
Alignm length: | 538 |
Alignm identity: | 392 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 68, 187 |
Conread position: | 7-525 |
Cow position: | chr17:16118026-16118543 (view UCSC Genome Browser custom track) |
Alignm length: | 532 |
Alignm identity: | 424 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 68, 91 |
Conread position: | 7-525 |
Cow position: | chr17:29079791-29079291 (view UCSC Genome Browser custom track) |
Alignm length: | 536 |
Alignm identity: | 397 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 62, 24 |
Conread position: | 9-238 |
Cow position: | chr17:12631432-12631666 (view UCSC Genome Browser custom track) |
Alignm length: | 237 |
Alignm identity: | 157 |
Alignm E-value: | 3e-21 |
Alignm gaps (pig, cow): | 66, 99 |
Conread position: | 9-365 |
Cow position: | chr17:38829321-38828954 (view UCSC Genome Browser custom track) |
Alignm length: | 374 |
Alignm identity: | 287 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 78, 22 |
Conread position: | 13-515 |
Cow position: | chr17:15374821-15374328 (view UCSC Genome Browser custom track) |
Alignm length: | 518 |
Alignm identity: | 395 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 63, 22 |
Conread position: | 13-529 |
Cow position: | chr17:22563584-22563051 (view UCSC Genome Browser custom track) |
Alignm length: | 539 |
Alignm identity: | 396 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 57, 272 |
Conread position: | 14-522 |
Cow position: | chr17:241724-241207 (view UCSC Genome Browser custom track) |
Alignm length: | 531 |
Alignm identity: | 354 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 63, 158 |
Conread position: | 22-496 |
Cow position: | chr17:11083705-11084196 (view UCSC Genome Browser custom track) |
Alignm length: | 496 |
Alignm identity: | 386 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 52, 263 |
Conread position: | 22-523 |
Cow position: | chr17:20033836-20033351 (view UCSC Genome Browser custom track) |
Alignm length: | 518 |
Alignm identity: | 371 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 53, 26 |
Conread position: | 29-276 |
Cow position: | chr17:42258293-42258038 (view UCSC Genome Browser custom track) |
Alignm length: | 259 |
Alignm identity: | 195 |
Alignm E-value: | 8.99634e-43 |
Alignm gaps (pig, cow): | 44, 76 |
Conread position: | 29-448 |
Cow position: | chr17:1672720-1672287 (view UCSC Genome Browser custom track) |
Alignm length: | 440 |
Alignm identity: | 339 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 46, 255 |
Conread position: | 76-450 |
Cow position: | chr17:2583760-2583377 (view UCSC Genome Browser custom track) |
Alignm length: | 393 |
Alignm identity: | 302 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 23, 135 |
Conread position: | 80-525 |
Cow position: | chr17:18198718-18198264 (view UCSC Genome Browser custom track) |
Alignm length: | 461 |
Alignm identity: | 314 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 44, 93 |
Conread position: | 80-525 |
Cow position: | chr17:21767254-21766807 (view UCSC Genome Browser custom track) |
Alignm length: | 456 |
Alignm identity: | 344 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 43, 159 |
Conread position: | 82-507 |
Cow position: | chr17:31233032-31232607 (view UCSC Genome Browser custom track) |
Alignm length: | 439 |
Alignm identity: | 329 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 33, 29 |
Conread position: | 87-309 |
Cow position: | chr17:42313241-42313011 (view UCSC Genome Browser custom track) |
Alignm length: | 233 |
Alignm identity: | 180 |
Alignm E-value: | 2.99878e-43 |
Alignm gaps (pig, cow): | 37, 86 |
Conread position: | 87-522 |
Cow position: | chr17:4085422-4084981 (view UCSC Genome Browser custom track) |
Alignm length: | 448 |
Alignm identity: | 345 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 6, 84 |
Conread position: | 102-549 |
Cow position: | chr17:1311421-1311874 (view UCSC Genome Browser custom track) |
Alignm length: | 461 |
Alignm identity: | 352 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 21, 158 |
Conread position: | 120-313 |
Cow position: | chr17:12290166-12290364 (view UCSC Genome Browser custom track) |
Alignm length: | 201 |
Alignm identity: | 159 |
Alignm E-value: | 2e-40 |
Alignm gaps (pig, cow): | 34, 49 |
Conread position: | 120-525 |
Cow position: | chr17:138922-138523 (view UCSC Genome Browser custom track) |
Alignm length: | 415 |
Alignm identity: | 320 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 32, 101 |
Conread position: | 120-525 |
Cow position: | chr17:29950532-29950125 (view UCSC Genome Browser custom track) |
Alignm length: | 416 |
Alignm identity: | 334 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 32, 153 |
Conread position: | 151-320 |
Cow position: | chr17:24876721-24876882 (view UCSC Genome Browser custom track) |
Alignm length: | 171 |
Alignm identity: | 136 |
Alignm E-value: | 8e-32 |
Alignm gaps (pig, cow): | 144, 12 |
Conread position: | 153-445 |
Cow position: | chr17:11337888-11338159 (view UCSC Genome Browser custom track) |
Alignm length: | 297 |
Alignm identity: | 218 |
Alignm E-value: | 2e-38 |
Alignm gaps (pig, cow): | 272, 16 |
Conread position: | 160-413 |
Cow position: | chr17:4570487-4570239 (view UCSC Genome Browser custom track) |
Alignm length: | 257 |
Alignm identity: | 190 |
Alignm E-value: | 3.00018e-42 |
Alignm gaps (pig, cow): | 190, 92 |
Conread position: | 163-317 |
Cow position: | chr17:18421657-18421504 (view UCSC Genome Browser custom track) |
Alignm length: | 155 |
Alignm identity: | 128 |
Alignm E-value: | 5e-38 |
Alignm gaps (pig, cow): | 105, 0 |
Conread position: | 165-523 |
Cow position: | chr17:15351310-15350962 (view UCSC Genome Browser custom track) |
Alignm length: | 364 |
Alignm identity: | 290 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 12, 69 |
Conread position: | 189-320 |
Cow position: | chr17:37699465-37699589 (view UCSC Genome Browser custom track) |
Alignm length: | 132 |
Alignm identity: | 105 |
Alignm E-value: | 1e-23 |
Alignm gaps (pig, cow): | 63, 0 |
Conread position: | 195-405 |
Cow position: | chr17:42247624-42247816 (view UCSC Genome Browser custom track) |
Alignm length: | 211 |
Alignm identity: | 161 |
Alignm E-value: | 9e-33 |
Alignm gaps (pig, cow): | 57, 0 |
Conread position: | 268-524 |
Cow position: | chr17:16464246-16463994 (view UCSC Genome Browser custom track) |
Alignm length: | 261 |
Alignm identity: | 211 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 159, 13 |
Show alignments to all cow chromosomes.