Cow genome map
| Conread name: | rcki31_m16.y1 |
| Conread position: | 1-317 |
| Cow position: | chr19:14180321-14180652 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 254 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 74, 180 |
| Conread position: | 1-368 |
| Cow position: | chr19:28575722-28576102 (view UCSC Genome Browser custom track) |
| Alignm length: | 382 |
| Alignm identity: | 285 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 76, 280 |
| Conread position: | 1-411 |
| Cow position: | chr19:40883850-40884272 (view UCSC Genome Browser custom track) |
| Alignm length: | 424 |
| Alignm identity: | 308 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 74, 413 |
| Conread position: | 1-413 |
| Cow position: | chr19:39697154-39696744 (view UCSC Genome Browser custom track) |
| Alignm length: | 428 |
| Alignm identity: | 324 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 75, 51 |
| Conread position: | 1-436 |
| Cow position: | chr19:255445-255891 (view UCSC Genome Browser custom track) |
| Alignm length: | 457 |
| Alignm identity: | 316 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 75, 34 |
| Conread position: | 1-491 |
| Cow position: | chr19:930499-929994 (view UCSC Genome Browser custom track) |
| Alignm length: | 512 |
| Alignm identity: | 387 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 76, 284 |
| Conread position: | 1-538 |
| Cow position: | chr19:55843674-55843131 (view UCSC Genome Browser custom track) |
| Alignm length: | 556 |
| Alignm identity: | 425 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 74, 176 |
| Conread position: | 3-365 |
| Cow position: | chr19:12601026-12601399 (view UCSC Genome Browser custom track) |
| Alignm length: | 380 |
| Alignm identity: | 301 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 72, 282 |
| Conread position: | 3-529 |
| Cow position: | chr19:55421714-55421183 (view UCSC Genome Browser custom track) |
| Alignm length: | 543 |
| Alignm identity: | 396 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 10, 172 |
| Conread position: | 5-525 |
| Cow position: | chr19:4389250-4388722 (view UCSC Genome Browser custom track) |
| Alignm length: | 537 |
| Alignm identity: | 425 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 72, 170 |
| Conread position: | 6-321 |
| Cow position: | chr19:30237379-30237054 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 251 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 66, 43 |
| Conread position: | 6-523 |
| Cow position: | chr19:5044025-5044538 (view UCSC Genome Browser custom track) |
| Alignm length: | 538 |
| Alignm identity: | 415 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 69, 172 |
| Conread position: | 6-525 |
| Cow position: | chr19:435661-436198 (view UCSC Genome Browser custom track) |
| Alignm length: | 543 |
| Alignm identity: | 418 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 71, 281 |
| Conread position: | 6-525 |
| Cow position: | chr19:5733170-5732636 (view UCSC Genome Browser custom track) |
| Alignm length: | 539 |
| Alignm identity: | 407 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 66, 279 |
| Conread position: | 6-525 |
| Cow position: | chr19:7491759-7491237 (view UCSC Genome Browser custom track) |
| Alignm length: | 539 |
| Alignm identity: | 397 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 67, 84 |
| Conread position: | 6-525 |
| Cow position: | chr19:20403954-20403422 (view UCSC Genome Browser custom track) |
| Alignm length: | 539 |
| Alignm identity: | 413 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 69, 180 |
| Conread position: | 6-525 |
| Cow position: | chr19:33945241-33944706 (view UCSC Genome Browser custom track) |
| Alignm length: | 541 |
| Alignm identity: | 420 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 71, 279 |
| Conread position: | 6-525 |
| Cow position: | chr19:36351943-36351414 (view UCSC Genome Browser custom track) |
| Alignm length: | 540 |
| Alignm identity: | 408 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 71, 244 |
| Conread position: | 6-525 |
| Cow position: | chr19:39181859-39182401 (view UCSC Genome Browser custom track) |
| Alignm length: | 547 |
| Alignm identity: | 429 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 71, 285 |
| Conread position: | 6-525 |
| Cow position: | chr19:40790683-40791217 (view UCSC Genome Browser custom track) |
| Alignm length: | 539 |
| Alignm identity: | 415 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 71, 276 |
| Conread position: | 6-525 |
| Cow position: | chr19:40848814-40849352 (view UCSC Genome Browser custom track) |
| Alignm length: | 544 |
| Alignm identity: | 423 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 71, 279 |
| Conread position: | 6-525 |
| Cow position: | chr19:48534396-48533867 (view UCSC Genome Browser custom track) |
| Alignm length: | 536 |
| Alignm identity: | 409 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 71, 205 |
| Conread position: | 7-412 |
| Cow position: | chr19:46873350-46873769 (view UCSC Genome Browser custom track) |
| Alignm length: | 425 |
| Alignm identity: | 326 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 68, 175 |
| Conread position: | 7-425 |
| Cow position: | chr19:28611038-28610620 (view UCSC Genome Browser custom track) |
| Alignm length: | 436 |
| Alignm identity: | 314 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 68, 44 |
| Conread position: | 7-461 |
| Cow position: | chr19:46821522-46821059 (view UCSC Genome Browser custom track) |
| Alignm length: | 478 |
| Alignm identity: | 352 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 68, 37 |
| Conread position: | 7-523 |
| Cow position: | chr19:176150-175609 (view UCSC Genome Browser custom track) |
| Alignm length: | 546 |
| Alignm identity: | 397 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 70, 287 |
| Conread position: | 7-529 |
| Cow position: | chr19:55217481-55216939 (view UCSC Genome Browser custom track) |
| Alignm length: | 547 |
| Alignm identity: | 385 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 66, 281 |
| Conread position: | 9-539 |
| Cow position: | chr19:35381410-35381947 (view UCSC Genome Browser custom track) |
| Alignm length: | 550 |
| Alignm identity: | 390 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 90, 62 |
| Conread position: | 16-361 |
| Cow position: | chr19:14528495-14528138 (view UCSC Genome Browser custom track) |
| Alignm length: | 373 |
| Alignm identity: | 272 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 58, 174 |
| Conread position: | 17-521 |
| Cow position: | chr19:36189362-36188860 (view UCSC Genome Browser custom track) |
| Alignm length: | 524 |
| Alignm identity: | 388 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 59, 277 |
| Conread position: | 21-525 |
| Cow position: | chr19:39394861-39394340 (view UCSC Genome Browser custom track) |
| Alignm length: | 526 |
| Alignm identity: | 403 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 57, 264 |
| Conread position: | 71-525 |
| Cow position: | chr19:45464740-45464286 (view UCSC Genome Browser custom track) |
| Alignm length: | 473 |
| Alignm identity: | 355 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 145 |
| Conread position: | 92-397 |
| Cow position: | chr19:27347487-27347781 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 225 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 32, 113 |
| Conread position: | 92-525 |
| Cow position: | chr19:197595-197152 (view UCSC Genome Browser custom track) |
| Alignm length: | 458 |
| Alignm identity: | 331 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 31, 235 |
| Conread position: | 108-390 |
| Cow position: | chr19:21337341-21337628 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 178 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 15, 168 |
| Conread position: | 151-536 |
| Cow position: | chr19:39339558-39339939 (view UCSC Genome Browser custom track) |
| Alignm length: | 392 |
| Alignm identity: | 318 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 274, 21 |
| Conread position: | 152-522 |
| Cow position: | chr19:24671985-24672353 (view UCSC Genome Browser custom track) |
| Alignm length: | 378 |
| Alignm identity: | 257 |
| Alignm E-value: | 9.00054e-42 |
| Alignm gaps (pig, cow): | 166, 20 |
| Conread position: | 163-525 |
| Cow position: | chr19:9118311-9117949 (view UCSC Genome Browser custom track) |
| Alignm length: | 367 |
| Alignm identity: | 297 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 262, 105 |
| Conread position: | 164-481 |
| Cow position: | chr19:5026692-5027009 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 264 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 261, 104 |
| Conread position: | 201-456 |
| Cow position: | chr19:55418132-55418369 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 185 |
| Alignm E-value: | 8e-30 |
| Alignm gaps (pig, cow): | 228, 40 |
| Conread position: | 241-525 |
| Cow position: | chr19:16478444-16478727 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 237 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 184, 27 |
| Conread position: | 246-424 |
| Cow position: | chr19:1355158-1354981 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 137 |
| Alignm E-value: | 8e-30 |
| Alignm gaps (pig, cow): | 84, 133 |
| Conread position: | 282-525 |
| Cow position: | chr19:12776492-12776255 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 201 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 143, 71 |
Show alignments to all cow chromosomes.