Cow genome map

Conread name: rcki31_m16.y1

Conread position: 1-212
Cow position:
Alignm length: 229
Alignm identity: 169
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 74, 0

Conread position: 1-289
Cow position:
Alignm length: 305
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 179

Conread position: 1-347
Cow position:
Alignm length: 367
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 179

Conread position: 1-396
Cow position:
Alignm length: 413
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 23

Conread position: 1-411
Cow position:
Alignm length: 422
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 173

Conread position: 1-425
Cow position:
Alignm length: 442
Alignm identity: 337
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 24

Conread position: 1-509
Cow position:
Alignm length: 531
Alignm identity: 388
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 55

Conread position: 1-516
Cow position:
Alignm length: 528
Alignm identity: 376
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 81

Conread position: 1-525
Cow position:
Alignm length: 546
Alignm identity: 423
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 178

Conread position: 1-525
Cow position:
Alignm length: 549
Alignm identity: 412
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 58

Conread position: 1-525
Cow position:
Alignm length: 546
Alignm identity: 415
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 48

Conread position: 1-525
Cow position:
Alignm length: 549
Alignm identity: 419
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 29

Conread position: 1-525
Cow position:
Alignm length: 543
Alignm identity: 421
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 261

Conread position: 1-525
Cow position:
Alignm length: 542
Alignm identity: 421
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 277

Conread position: 1-525
Cow position:
Alignm length: 547
Alignm identity: 413
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 34

Conread position: 1-525
Cow position:
Alignm length: 546
Alignm identity: 417
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 392

Conread position: 3-525
Cow position:
Alignm length: 568
Alignm identity: 425
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 306

Conread position: 6-189
Cow position:
Alignm length: 201
Alignm identity: 155
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 69, 174

Conread position: 6-357
Cow position:
Alignm length: 372
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 117, 62

Conread position: 6-401
Cow position:
Alignm length: 416
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 9

Conread position: 6-449
Cow position:
Alignm length: 465
Alignm identity: 356
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 9

Conread position: 6-486
Cow position:
Alignm length: 502
Alignm identity: 395
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 279

Conread position: 6-497
Cow position:
Alignm length: 528
Alignm identity: 401
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 43

Conread position: 6-507
Cow position:
Alignm length: 525
Alignm identity: 393
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 57

Conread position: 6-515
Cow position:
Alignm length: 532
Alignm identity: 408
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 209

Conread position: 6-522
Cow position:
Alignm length: 539
Alignm identity: 399
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 142

Conread position: 6-525
Cow position:
Alignm length: 533
Alignm identity: 400
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 15

Conread position: 6-525
Cow position:
Alignm length: 541
Alignm identity: 425
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 279

Conread position: 6-525
Cow position:
Alignm length: 537
Alignm identity: 420
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 275

Conread position: 6-525
Cow position:
Alignm length: 545
Alignm identity: 421
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 283

Conread position: 6-525
Cow position:
Alignm length: 537
Alignm identity: 414
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 275

Conread position: 6-525
Cow position:
Alignm length: 543
Alignm identity: 425
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 279

Conread position: 6-525
Cow position:
Alignm length: 533
Alignm identity: 405
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 116

Conread position: 6-525
Cow position:
Alignm length: 539
Alignm identity: 395
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 309

Conread position: 6-525
Cow position:
Alignm length: 537
Alignm identity: 376
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 169

Conread position: 6-525
Cow position:
Alignm length: 542
Alignm identity: 419
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 279

Conread position: 6-525
Cow position:
Alignm length: 540
Alignm identity: 416
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 280

Conread position: 6-525
Cow position:
Alignm length: 542
Alignm identity: 422
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 193

Conread position: 6-525
Cow position:
Alignm length: 538
Alignm identity: 428
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 276

Conread position: 6-529
Cow position:
Alignm length: 545
Alignm identity: 422
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 279

Conread position: 6-529
Cow position:
Alignm length: 549
Alignm identity: 424
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 15

Conread position: 7-413
Cow position:
Alignm length: 422
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 381

Conread position: 9-344
Cow position:
Alignm length: 342
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 86

Conread position: 9-525
Cow position:
Alignm length: 531
Alignm identity: 361
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 40

Conread position: 15-525
Cow position:
Alignm length: 529
Alignm identity: 406
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 251

Conread position: 16-538
Cow position:
Alignm length: 535
Alignm identity: 403
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 81

Conread position: 19-425
Cow position:
Alignm length: 422
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 264

Conread position: 26-357
Cow position:
Alignm length: 346
Alignm identity: 244
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 50, 150

Conread position: 37-252
Cow position:
Alignm length: 234
Alignm identity: 171
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 39, 143

Conread position: 42-425
Cow position:
Alignm length: 401
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 243

Conread position: 42-500
Cow position:
Alignm length: 485
Alignm identity: 357
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 118

Conread position: 80-468
Cow position:
Alignm length: 401
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 191

Conread position: 80-484
Cow position:
Alignm length: 415
Alignm identity: 277
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 44, 91

Conread position: 95-525
Cow position:
Alignm length: 449
Alignm identity: 345
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 80

Conread position: 100-349
Cow position:
Alignm length: 256
Alignm identity: 185
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 25, 13

Conread position: 106-525
Cow position:
Alignm length: 436
Alignm identity: 342
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 67

Conread position: 211-525
Cow position:
Alignm length: 321
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 58

Conread position: 253-419
Cow position:
Alignm length: 168
Alignm identity: 136
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 11, 121

Conread position: 282-425
Cow position:
Alignm length: 144
Alignm identity: 115
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 91, 0

Show alignments to all cow chromosomes.