Cow genome map
| Conread name: | rcki31_m16.y1 |
| Conread position: | 1-327 |
| Cow position: | chr24:32359480-32359812 (view UCSC Genome Browser custom track) |
| Alignm length: | 345 |
| Alignm identity: | 253 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 74, 250 |
| Conread position: | 1-369 |
| Cow position: | chr24:30870303-30870685 (view UCSC Genome Browser custom track) |
| Alignm length: | 386 |
| Alignm identity: | 293 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 76, 284 |
| Conread position: | 1-425 |
| Cow position: | chr24:38588447-38588011 (view UCSC Genome Browser custom track) |
| Alignm length: | 441 |
| Alignm identity: | 328 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 75, 32 |
| Conread position: | 1-448 |
| Cow position: | chr24:11104486-11104950 (view UCSC Genome Browser custom track) |
| Alignm length: | 469 |
| Alignm identity: | 363 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 74, 284 |
| Conread position: | 1-462 |
| Cow position: | chr24:26846937-26847415 (view UCSC Genome Browser custom track) |
| Alignm length: | 486 |
| Alignm identity: | 338 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 73, 281 |
| Conread position: | 1-490 |
| Cow position: | chr24:17566511-17566012 (view UCSC Genome Browser custom track) |
| Alignm length: | 513 |
| Alignm identity: | 385 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 70, 181 |
| Conread position: | 1-515 |
| Cow position: | chr24:26412712-26412187 (view UCSC Genome Browser custom track) |
| Alignm length: | 535 |
| Alignm identity: | 407 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 74, 283 |
| Conread position: | 1-515 |
| Cow position: | chr24:36555927-36556443 (view UCSC Genome Browser custom track) |
| Alignm length: | 531 |
| Alignm identity: | 404 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 71, 174 |
| Conread position: | 1-516 |
| Cow position: | chr24:14760565-14760027 (view UCSC Genome Browser custom track) |
| Alignm length: | 543 |
| Alignm identity: | 410 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 68, 290 |
| Conread position: | 1-523 |
| Cow position: | chr24:37197058-37197589 (view UCSC Genome Browser custom track) |
| Alignm length: | 548 |
| Alignm identity: | 367 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 74, 55 |
| Conread position: | 1-525 |
| Cow position: | chr24:3794148-3793609 (view UCSC Genome Browser custom track) |
| Alignm length: | 546 |
| Alignm identity: | 428 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 74, 284 |
| Conread position: | 1-525 |
| Cow position: | chr24:8607994-8607454 (view UCSC Genome Browser custom track) |
| Alignm length: | 546 |
| Alignm identity: | 420 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 73, 41 |
| Conread position: | 1-525 |
| Cow position: | chr24:12332041-12332587 (view UCSC Genome Browser custom track) |
| Alignm length: | 552 |
| Alignm identity: | 421 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 76, 278 |
| Conread position: | 1-525 |
| Cow position: | chr24:14375995-14376521 (view UCSC Genome Browser custom track) |
| Alignm length: | 539 |
| Alignm identity: | 398 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 75, 129 |
| Conread position: | 1-525 |
| Cow position: | chr24:16080819-16081362 (view UCSC Genome Browser custom track) |
| Alignm length: | 548 |
| Alignm identity: | 408 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 74, 280 |
| Conread position: | 1-525 |
| Cow position: | chr24:16558624-16559154 (view UCSC Genome Browser custom track) |
| Alignm length: | 545 |
| Alignm identity: | 414 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 76, 34 |
| Conread position: | 1-525 |
| Cow position: | chr24:31302349-31301830 (view UCSC Genome Browser custom track) |
| Alignm length: | 546 |
| Alignm identity: | 422 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 74, 251 |
| Conread position: | 1-525 |
| Cow position: | chr24:32608977-32608432 (view UCSC Genome Browser custom track) |
| Alignm length: | 552 |
| Alignm identity: | 441 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 77, 180 |
| Conread position: | 1-525 |
| Cow position: | chr24:33937594-33937054 (view UCSC Genome Browser custom track) |
| Alignm length: | 546 |
| Alignm identity: | 411 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 73, 229 |
| Conread position: | 1-525 |
| Cow position: | chr24:36779926-36779396 (view UCSC Genome Browser custom track) |
| Alignm length: | 536 |
| Alignm identity: | 422 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 69, 122 |
| Conread position: | 1-525 |
| Cow position: | chr24:41006137-41005604 (view UCSC Genome Browser custom track) |
| Alignm length: | 547 |
| Alignm identity: | 421 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 48, 218 |
| Conread position: | 1-525 |
| Cow position: | chr24:45087190-45086655 (view UCSC Genome Browser custom track) |
| Alignm length: | 545 |
| Alignm identity: | 403 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 31, 280 |
| Conread position: | 1-529 |
| Cow position: | chr24:28689065-28688551 (view UCSC Genome Browser custom track) |
| Alignm length: | 543 |
| Alignm identity: | 384 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 123, 75 |
| Conread position: | 1-535 |
| Cow position: | chr24:40466747-40467298 (view UCSC Genome Browser custom track) |
| Alignm length: | 556 |
| Alignm identity: | 433 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 78, 284 |
| Conread position: | 3-329 |
| Cow position: | chr24:34761173-34760829 (view UCSC Genome Browser custom track) |
| Alignm length: | 347 |
| Alignm identity: | 270 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 73, 178 |
| Conread position: | 3-525 |
| Cow position: | chr24:22975473-22974932 (view UCSC Genome Browser custom track) |
| Alignm length: | 547 |
| Alignm identity: | 423 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 27, 267 |
| Conread position: | 5-469 |
| Cow position: | chr24:18222817-18223300 (view UCSC Genome Browser custom track) |
| Alignm length: | 489 |
| Alignm identity: | 375 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 72, 282 |
| Conread position: | 5-525 |
| Cow position: | chr24:17309763-17310307 (view UCSC Genome Browser custom track) |
| Alignm length: | 549 |
| Alignm identity: | 412 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 70, 285 |
| Conread position: | 5-525 |
| Cow position: | chr24:17365323-17365855 (view UCSC Genome Browser custom track) |
| Alignm length: | 542 |
| Alignm identity: | 405 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 70, 16 |
| Conread position: | 5-525 |
| Cow position: | chr24:18266831-18267366 (view UCSC Genome Browser custom track) |
| Alignm length: | 548 |
| Alignm identity: | 412 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 70, 176 |
| Conread position: | 5-525 |
| Cow position: | chr24:26388247-26388760 (view UCSC Genome Browser custom track) |
| Alignm length: | 537 |
| Alignm identity: | 399 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 70, 158 |
| Conread position: | 6-375 |
| Cow position: | chr24:36710499-36710118 (view UCSC Genome Browser custom track) |
| Alignm length: | 389 |
| Alignm identity: | 284 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 64, 175 |
| Conread position: | 6-382 |
| Cow position: | chr24:41671526-41671129 (view UCSC Genome Browser custom track) |
| Alignm length: | 404 |
| Alignm identity: | 291 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 34, 51 |
| Conread position: | 6-450 |
| Cow position: | chr24:31357246-31356802 (view UCSC Genome Browser custom track) |
| Alignm length: | 461 |
| Alignm identity: | 333 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 69, 170 |
| Conread position: | 6-468 |
| Cow position: | chr24:23052226-23052706 (view UCSC Genome Browser custom track) |
| Alignm length: | 488 |
| Alignm identity: | 373 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 71, 43 |
| Conread position: | 6-476 |
| Cow position: | chr24:28601381-28601851 (view UCSC Genome Browser custom track) |
| Alignm length: | 485 |
| Alignm identity: | 366 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 71, 152 |
| Conread position: | 6-516 |
| Cow position: | chr24:20283551-20284076 (view UCSC Genome Browser custom track) |
| Alignm length: | 532 |
| Alignm identity: | 420 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 71, 279 |
| Conread position: | 6-525 |
| Cow position: | chr24:6035519-6036056 (view UCSC Genome Browser custom track) |
| Alignm length: | 542 |
| Alignm identity: | 418 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 71, 280 |
| Conread position: | 6-525 |
| Cow position: | chr24:6413139-6412603 (view UCSC Genome Browser custom track) |
| Alignm length: | 541 |
| Alignm identity: | 422 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 71, 279 |
| Conread position: | 6-525 |
| Cow position: | chr24:9071186-9071716 (view UCSC Genome Browser custom track) |
| Alignm length: | 543 |
| Alignm identity: | 424 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 65, 14 |
| Conread position: | 6-525 |
| Cow position: | chr24:29084004-29084540 (view UCSC Genome Browser custom track) |
| Alignm length: | 544 |
| Alignm identity: | 411 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 69, 9 |
| Conread position: | 6-525 |
| Cow position: | chr24:35067134-35067650 (view UCSC Genome Browser custom track) |
| Alignm length: | 531 |
| Alignm identity: | 410 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 71, 104 |
| Conread position: | 6-525 |
| Cow position: | chr24:36036170-36036701 (view UCSC Genome Browser custom track) |
| Alignm length: | 544 |
| Alignm identity: | 423 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 64, 215 |
| Conread position: | 6-525 |
| Cow position: | chr24:38814303-38813769 (view UCSC Genome Browser custom track) |
| Alignm length: | 542 |
| Alignm identity: | 405 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 93, 277 |
| Conread position: | 7-525 |
| Cow position: | chr24:12090635-12090104 (view UCSC Genome Browser custom track) |
| Alignm length: | 540 |
| Alignm identity: | 404 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 70, 25 |
| Conread position: | 7-525 |
| Cow position: | chr24:12198696-12199241 (view UCSC Genome Browser custom track) |
| Alignm length: | 551 |
| Alignm identity: | 409 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 68, 348 |
| Conread position: | 7-525 |
| Cow position: | chr24:35823546-35824076 (view UCSC Genome Browser custom track) |
| Alignm length: | 540 |
| Alignm identity: | 413 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 71, 7 |
| Conread position: | 8-523 |
| Cow position: | chr24:27148771-27148237 (view UCSC Genome Browser custom track) |
| Alignm length: | 546 |
| Alignm identity: | 413 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 81, 280 |
| Conread position: | 13-525 |
| Cow position: | chr24:9549912-9549390 (view UCSC Genome Browser custom track) |
| Alignm length: | 535 |
| Alignm identity: | 412 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 64, 13 |
| Conread position: | 15-525 |
| Cow position: | chr24:12146937-12147465 (view UCSC Genome Browser custom track) |
| Alignm length: | 535 |
| Alignm identity: | 400 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 60, 140 |
| Conread position: | 58-321 |
| Cow position: | chr24:17544335-17544614 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 212 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 19, 227 |
| Conread position: | 93-525 |
| Cow position: | chr24:8431932-8431497 (view UCSC Genome Browser custom track) |
| Alignm length: | 447 |
| Alignm identity: | 348 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 30, 10 |
| Conread position: | 95-500 |
| Cow position: | chr24:16908861-16908454 (view UCSC Genome Browser custom track) |
| Alignm length: | 421 |
| Alignm identity: | 289 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 27, 78 |
| Conread position: | 120-525 |
| Cow position: | chr24:25698473-25698070 (view UCSC Genome Browser custom track) |
| Alignm length: | 415 |
| Alignm identity: | 327 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 31, 118 |
| Conread position: | 120-525 |
| Cow position: | chr24:36721980-36721568 (view UCSC Genome Browser custom track) |
| Alignm length: | 417 |
| Alignm identity: | 339 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 154 |
| Conread position: | 125-408 |
| Cow position: | chr24:14515927-14516208 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 218 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 42 |
| Conread position: | 183-523 |
| Cow position: | chr24:25285225-25284904 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 242 |
| Alignm E-value: | 8.00141e-43 |
| Alignm gaps (pig, cow): | 60, 47 |
| Conread position: | 194-411 |
| Cow position: | chr24:29130977-29131186 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 166 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 18, 47 |
| Conread position: | 201-332 |
| Cow position: | chr24:14380982-14381112 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 103 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 67, 0 |
| Conread position: | 231-526 |
| Cow position: | chr24:27724625-27724922 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 234 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 194, 37 |
| Conread position: | 234-510 |
| Cow position: | chr24:5653295-5653571 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 228 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 190, 34 |
| Conread position: | 235-510 |
| Cow position: | chr24:9390569-9390291 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 232 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 31, 88 |
| Conread position: | 271-525 |
| Cow position: | chr24:6339954-6339698 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 197 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 153, 101 |
Show alignments to all cow chromosomes.