Cow genome map
Conread name: | rcki31_m16.y1 |
Conread position: | 1-146 |
Cow position: | chr26:30569511-30569669 (view UCSC Genome Browser custom track) |
Alignm length: | 159 |
Alignm identity: | 122 |
Alignm E-value: | 7e-23 |
Alignm gaps (pig, cow): | 74, 0 |
Conread position: | 1-223 |
Cow position: | chr26:13556597-13556830 (view UCSC Genome Browser custom track) |
Alignm length: | 235 |
Alignm identity: | 176 |
Alignm E-value: | 1e-37 |
Alignm gaps (pig, cow): | 74, 174 |
Conread position: | 1-231 |
Cow position: | chr26:23600416-23600657 (view UCSC Genome Browser custom track) |
Alignm length: | 243 |
Alignm identity: | 178 |
Alignm E-value: | 3e-36 |
Alignm gaps (pig, cow): | 74, 199 |
Conread position: | 1-410 |
Cow position: | chr26:7459343-7459767 (view UCSC Genome Browser custom track) |
Alignm length: | 429 |
Alignm identity: | 321 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 74, 265 |
Conread position: | 1-424 |
Cow position: | chr26:13773662-13773236 (view UCSC Genome Browser custom track) |
Alignm length: | 441 |
Alignm identity: | 340 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 74, 39 |
Conread position: | 1-425 |
Cow position: | chr26:12662130-12662549 (view UCSC Genome Browser custom track) |
Alignm length: | 434 |
Alignm identity: | 327 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 77, 69 |
Conread position: | 1-449 |
Cow position: | chr26:20256237-20255786 (view UCSC Genome Browser custom track) |
Alignm length: | 464 |
Alignm identity: | 354 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 76, 175 |
Conread position: | 1-468 |
Cow position: | chr26:6843603-6844085 (view UCSC Genome Browser custom track) |
Alignm length: | 487 |
Alignm identity: | 374 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 70, 282 |
Conread position: | 1-469 |
Cow position: | chr26:3564420-3564906 (view UCSC Genome Browser custom track) |
Alignm length: | 491 |
Alignm identity: | 376 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 74, 284 |
Conread position: | 1-525 |
Cow position: | chr26:5680158-5679608 (view UCSC Genome Browser custom track) |
Alignm length: | 557 |
Alignm identity: | 423 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 76, 24 |
Conread position: | 1-525 |
Cow position: | chr26:9100373-9100900 (view UCSC Genome Browser custom track) |
Alignm length: | 549 |
Alignm identity: | 409 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 74, 182 |
Conread position: | 1-525 |
Cow position: | chr26:12584919-12585460 (view UCSC Genome Browser custom track) |
Alignm length: | 546 |
Alignm identity: | 419 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 74, 284 |
Conread position: | 1-525 |
Cow position: | chr26:17428856-17429397 (view UCSC Genome Browser custom track) |
Alignm length: | 546 |
Alignm identity: | 428 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 76, 284 |
Conread position: | 1-525 |
Cow position: | chr26:20497159-20496608 (view UCSC Genome Browser custom track) |
Alignm length: | 563 |
Alignm identity: | 426 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 39, 190 |
Conread position: | 3-544 |
Cow position: | chr26:9694181-9694737 (view UCSC Genome Browser custom track) |
Alignm length: | 564 |
Alignm identity: | 436 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 73, 116 |
Conread position: | 5-521 |
Cow position: | chr26:4324105-4324624 (view UCSC Genome Browser custom track) |
Alignm length: | 539 |
Alignm identity: | 390 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 8, 182 |
Conread position: | 6-346 |
Cow position: | chr26:30725295-30725660 (view UCSC Genome Browser custom track) |
Alignm length: | 366 |
Alignm identity: | 275 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 71, 0 |
Conread position: | 6-365 |
Cow position: | chr26:18877420-18877046 (view UCSC Genome Browser custom track) |
Alignm length: | 378 |
Alignm identity: | 286 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 76, 224 |
Conread position: | 6-407 |
Cow position: | chr26:22831425-22831836 (view UCSC Genome Browser custom track) |
Alignm length: | 418 |
Alignm identity: | 323 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 71, 278 |
Conread position: | 6-463 |
Cow position: | chr26:12125962-12126410 (view UCSC Genome Browser custom track) |
Alignm length: | 473 |
Alignm identity: | 342 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 92, 169 |
Conread position: | 6-478 |
Cow position: | chr26:7559002-7559491 (view UCSC Genome Browser custom track) |
Alignm length: | 494 |
Alignm identity: | 380 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 69, 279 |
Conread position: | 6-483 |
Cow position: | chr26:3187364-3186880 (view UCSC Genome Browser custom track) |
Alignm length: | 496 |
Alignm identity: | 374 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 88, 63 |
Conread position: | 6-525 |
Cow position: | chr26:1621261-1620729 (view UCSC Genome Browser custom track) |
Alignm length: | 545 |
Alignm identity: | 417 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 69, 197 |
Conread position: | 6-525 |
Cow position: | chr26:17327782-17327240 (view UCSC Genome Browser custom track) |
Alignm length: | 547 |
Alignm identity: | 402 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 71, 285 |
Conread position: | 7-486 |
Cow position: | chr26:9836084-9835584 (view UCSC Genome Browser custom track) |
Alignm length: | 506 |
Alignm identity: | 347 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 68, 8 |
Conread position: | 7-508 |
Cow position: | chr26:1885630-1885108 (view UCSC Genome Browser custom track) |
Alignm length: | 531 |
Alignm identity: | 403 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 67, 187 |
Conread position: | 7-522 |
Cow position: | chr26:22621814-22621308 (view UCSC Genome Browser custom track) |
Alignm length: | 531 |
Alignm identity: | 361 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 48, 44 |
Conread position: | 8-408 |
Cow position: | chr26:20218855-20218449 (view UCSC Genome Browser custom track) |
Alignm length: | 417 |
Alignm identity: | 302 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 67, 227 |
Conread position: | 15-425 |
Cow position: | chr26:3690113-3689674 (view UCSC Genome Browser custom track) |
Alignm length: | 446 |
Alignm identity: | 322 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 58, 176 |
Conread position: | 42-344 |
Cow position: | chr26:17169408-17169090 (view UCSC Genome Browser custom track) |
Alignm length: | 320 |
Alignm identity: | 238 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 33, 243 |
Conread position: | 54-439 |
Cow position: | chr26:21823042-21823425 (view UCSC Genome Browser custom track) |
Alignm length: | 407 |
Alignm identity: | 289 |
Alignm E-value: | 1.99965e-42 |
Alignm gaps (pig, cow): | 21, 124 |
Conread position: | 71-425 |
Cow position: | chr26:9063630-9063270 (view UCSC Genome Browser custom track) |
Alignm length: | 371 |
Alignm identity: | 268 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 18, 116 |
Conread position: | 120-463 |
Cow position: | chr26:624729-625065 (view UCSC Genome Browser custom track) |
Alignm length: | 351 |
Alignm identity: | 229 |
Alignm E-value: | 3e-26 |
Alignm gaps (pig, cow): | 31, 49 |
Conread position: | 120-524 |
Cow position: | chr26:46162-46572 (view UCSC Genome Browser custom track) |
Alignm length: | 417 |
Alignm identity: | 322 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 23, 50 |
Conread position: | 122-336 |
Cow position: | chr26:2670334-2670549 (view UCSC Genome Browser custom track) |
Alignm length: | 220 |
Alignm identity: | 164 |
Alignm E-value: | 3e-35 |
Alignm gaps (pig, cow): | 30, 142 |
Conread position: | 152-472 |
Cow position: | chr26:6038244-6038551 (view UCSC Genome Browser custom track) |
Alignm length: | 325 |
Alignm identity: | 259 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 273, 11 |
Conread position: | 152-487 |
Cow position: | chr26:23809976-23810307 (view UCSC Genome Browser custom track) |
Alignm length: | 340 |
Alignm identity: | 236 |
Alignm E-value: | 1.96182e-44 |
Alignm gaps (pig, cow): | 270, 11 |
Conread position: | 152-514 |
Cow position: | chr26:12668883-12668542 (view UCSC Genome Browser custom track) |
Alignm length: | 364 |
Alignm identity: | 256 |
Alignm E-value: | 2.8026e-45 |
Alignm gaps (pig, cow): | 131, 11 |
Conread position: | 153-525 |
Cow position: | chr26:30625165-30625535 (view UCSC Genome Browser custom track) |
Alignm length: | 379 |
Alignm identity: | 283 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 274, 10 |
Conread position: | 163-525 |
Cow position: | chr26:1915780-1915420 (view UCSC Genome Browser custom track) |
Alignm length: | 367 |
Alignm identity: | 290 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 262, 105 |
Conread position: | 183-514 |
Cow position: | chr26:14291211-14290897 (view UCSC Genome Browser custom track) |
Alignm length: | 336 |
Alignm identity: | 249 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 242, 73 |
Conread position: | 229-525 |
Cow position: | chr26:6321479-6321185 (view UCSC Genome Browser custom track) |
Alignm length: | 301 |
Alignm identity: | 234 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 198, 47 |
Conread position: | 235-413 |
Cow position: | chr26:756245-756416 (view UCSC Genome Browser custom track) |
Alignm length: | 179 |
Alignm identity: | 141 |
Alignm E-value: | 3e-34 |
Alignm gaps (pig, cow): | 33, 0 |
Conread position: | 246-525 |
Cow position: | chr26:1614481-1614203 (view UCSC Genome Browser custom track) |
Alignm length: | 287 |
Alignm identity: | 226 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 131, 16 |
Conread position: | 254-525 |
Cow position: | chr26:11263084-11262821 (view UCSC Genome Browser custom track) |
Alignm length: | 276 |
Alignm identity: | 216 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 171, 50 |
Show alignments to all cow chromosomes.