Cow genome map

Conread name: rcki31_m16.y1

Conread position: 1-146
Cow position: chr26:30569511-30569669 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 122
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 74, 0

Conread position: 1-223
Cow position: chr26:13556597-13556830 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 176
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 74, 174

Conread position: 1-231
Cow position: chr26:23600416-23600657 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 178
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 74, 199

Conread position: 1-410
Cow position: chr26:7459343-7459767 (view UCSC Genome Browser custom track)
Alignm length: 429
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 265

Conread position: 1-424
Cow position: chr26:13773662-13773236 (view UCSC Genome Browser custom track)
Alignm length: 441
Alignm identity: 340
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 39

Conread position: 1-425
Cow position: chr26:12662130-12662549 (view UCSC Genome Browser custom track)
Alignm length: 434
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 69

Conread position: 1-449
Cow position: chr26:20256237-20255786 (view UCSC Genome Browser custom track)
Alignm length: 464
Alignm identity: 354
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 175

Conread position: 1-468
Cow position: chr26:6843603-6844085 (view UCSC Genome Browser custom track)
Alignm length: 487
Alignm identity: 374
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 282

Conread position: 1-469
Cow position: chr26:3564420-3564906 (view UCSC Genome Browser custom track)
Alignm length: 491
Alignm identity: 376
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 284

Conread position: 1-525
Cow position: chr26:5680158-5679608 (view UCSC Genome Browser custom track)
Alignm length: 557
Alignm identity: 423
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 24

Conread position: 1-525
Cow position: chr26:9100373-9100900 (view UCSC Genome Browser custom track)
Alignm length: 549
Alignm identity: 409
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 182

Conread position: 1-525
Cow position: chr26:12584919-12585460 (view UCSC Genome Browser custom track)
Alignm length: 546
Alignm identity: 419
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 284

Conread position: 1-525
Cow position: chr26:17428856-17429397 (view UCSC Genome Browser custom track)
Alignm length: 546
Alignm identity: 428
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 284

Conread position: 1-525
Cow position: chr26:20497159-20496608 (view UCSC Genome Browser custom track)
Alignm length: 563
Alignm identity: 426
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 190

Conread position: 3-544
Cow position: chr26:9694181-9694737 (view UCSC Genome Browser custom track)
Alignm length: 564
Alignm identity: 436
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 116

Conread position: 5-521
Cow position: chr26:4324105-4324624 (view UCSC Genome Browser custom track)
Alignm length: 539
Alignm identity: 390
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 182

Conread position: 6-346
Cow position: chr26:30725295-30725660 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 0

Conread position: 6-365
Cow position: chr26:18877420-18877046 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 224

Conread position: 6-407
Cow position: chr26:22831425-22831836 (view UCSC Genome Browser custom track)
Alignm length: 418
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 278

Conread position: 6-463
Cow position: chr26:12125962-12126410 (view UCSC Genome Browser custom track)
Alignm length: 473
Alignm identity: 342
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 169

Conread position: 6-478
Cow position: chr26:7559002-7559491 (view UCSC Genome Browser custom track)
Alignm length: 494
Alignm identity: 380
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 279

Conread position: 6-483
Cow position: chr26:3187364-3186880 (view UCSC Genome Browser custom track)
Alignm length: 496
Alignm identity: 374
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 63

Conread position: 6-525
Cow position: chr26:1621261-1620729 (view UCSC Genome Browser custom track)
Alignm length: 545
Alignm identity: 417
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 197

Conread position: 6-525
Cow position: chr26:17327782-17327240 (view UCSC Genome Browser custom track)
Alignm length: 547
Alignm identity: 402
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 285

Conread position: 7-486
Cow position: chr26:9836084-9835584 (view UCSC Genome Browser custom track)
Alignm length: 506
Alignm identity: 347
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 8

Conread position: 7-508
Cow position: chr26:1885630-1885108 (view UCSC Genome Browser custom track)
Alignm length: 531
Alignm identity: 403
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 187

Conread position: 7-522
Cow position: chr26:22621814-22621308 (view UCSC Genome Browser custom track)
Alignm length: 531
Alignm identity: 361
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 44

Conread position: 8-408
Cow position: chr26:20218855-20218449 (view UCSC Genome Browser custom track)
Alignm length: 417
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 227

Conread position: 15-425
Cow position: chr26:3690113-3689674 (view UCSC Genome Browser custom track)
Alignm length: 446
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 176

Conread position: 42-344
Cow position: chr26:17169408-17169090 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 243

Conread position: 54-439
Cow position: chr26:21823042-21823425 (view UCSC Genome Browser custom track)
Alignm length: 407
Alignm identity: 289
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 21, 124

Conread position: 71-425
Cow position: chr26:9063630-9063270 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 116

Conread position: 120-463
Cow position: chr26:624729-625065 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 229
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 31, 49

Conread position: 120-524
Cow position: chr26:46162-46572 (view UCSC Genome Browser custom track)
Alignm length: 417
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 50

Conread position: 122-336
Cow position: chr26:2670334-2670549 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 164
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 30, 142

Conread position: 152-472
Cow position: chr26:6038244-6038551 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 273, 11

Conread position: 152-487
Cow position: chr26:23809976-23810307 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 236
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 270, 11

Conread position: 152-514
Cow position: chr26:12668883-12668542 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 256
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 131, 11

Conread position: 153-525
Cow position: chr26:30625165-30625535 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 274, 10

Conread position: 163-525
Cow position: chr26:1915780-1915420 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 262, 105

Conread position: 183-514
Cow position: chr26:14291211-14290897 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 242, 73

Conread position: 229-525
Cow position: chr26:6321479-6321185 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 198, 47

Conread position: 235-413
Cow position: chr26:756245-756416 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 141
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 33, 0

Conread position: 246-525
Cow position: chr26:1614481-1614203 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 131, 16

Conread position: 254-525
Cow position: chr26:11263084-11262821 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 216
Alignm E-value: 0
Alignm gaps (pig, cow): 171, 50

Show alignments to all cow chromosomes.