Cow genome map

Conread name: rcki31_m16.y1

Conread position: 1-275
Cow position:
Alignm length: 294
Alignm identity: 210
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 77, 43

Conread position: 1-339
Cow position:
Alignm length: 342
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 141

Conread position: 1-355
Cow position:
Alignm length: 368
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 48

Conread position: 1-357
Cow position:
Alignm length: 381
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 185

Conread position: 1-368
Cow position:
Alignm length: 378
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 25

Conread position: 1-399
Cow position:
Alignm length: 413
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 176

Conread position: 1-443
Cow position:
Alignm length: 461
Alignm identity: 352
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 176

Conread position: 1-479
Cow position:
Alignm length: 500
Alignm identity: 388
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 34

Conread position: 1-511
Cow position:
Alignm length: 530
Alignm identity: 397
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 176

Conread position: 1-514
Cow position:
Alignm length: 531
Alignm identity: 407
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 227

Conread position: 1-524
Cow position:
Alignm length: 554
Alignm identity: 417
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 283

Conread position: 1-525
Cow position:
Alignm length: 546
Alignm identity: 412
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 284

Conread position: 1-525
Cow position:
Alignm length: 545
Alignm identity: 410
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 68

Conread position: 1-525
Cow position:
Alignm length: 547
Alignm identity: 422
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 267

Conread position: 1-525
Cow position:
Alignm length: 538
Alignm identity: 411
Alignm E-value: 0
Alignm gaps (pig, cow): 122, 64

Conread position: 1-525
Cow position:
Alignm length: 547
Alignm identity: 416
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 48

Conread position: 1-525
Cow position:
Alignm length: 545
Alignm identity: 425
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 50

Conread position: 1-525
Cow position:
Alignm length: 546
Alignm identity: 425
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 262

Conread position: 1-525
Cow position:
Alignm length: 546
Alignm identity: 420
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 284

Conread position: 1-525
Cow position:
Alignm length: 551
Alignm identity: 404
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 180

Conread position: 1-525
Cow position:
Alignm length: 544
Alignm identity: 419
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 176

Conread position: 1-525
Cow position:
Alignm length: 549
Alignm identity: 415
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 287

Conread position: 1-535
Cow position:
Alignm length: 554
Alignm identity: 433
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 39

Conread position: 5-425
Cow position:
Alignm length: 437
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 279

Conread position: 6-413
Cow position:
Alignm length: 425
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 20

Conread position: 6-423
Cow position:
Alignm length: 441
Alignm identity: 336
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 177

Conread position: 6-495
Cow position:
Alignm length: 498
Alignm identity: 377
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 20

Conread position: 6-523
Cow position:
Alignm length: 539
Alignm identity: 422
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 247

Conread position: 6-525
Cow position:
Alignm length: 529
Alignm identity: 398
Alignm E-value: 0
Alignm gaps (pig, cow): 146, 68

Conread position: 6-525
Cow position:
Alignm length: 542
Alignm identity: 398
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 9

Conread position: 6-525
Cow position:
Alignm length: 543
Alignm identity: 400
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 39

Conread position: 6-525
Cow position:
Alignm length: 542
Alignm identity: 409
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 280

Conread position: 6-525
Cow position:
Alignm length: 546
Alignm identity: 416
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 165

Conread position: 6-525
Cow position:
Alignm length: 541
Alignm identity: 425
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 279

Conread position: 6-525
Cow position:
Alignm length: 550
Alignm identity: 423
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 288

Conread position: 6-529
Cow position:
Alignm length: 541
Alignm identity: 392
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 74

Conread position: 6-537
Cow position:
Alignm length: 566
Alignm identity: 423
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 183

Conread position: 7-218
Cow position:
Alignm length: 222
Alignm identity: 157
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 114, 12

Conread position: 7-349
Cow position:
Alignm length: 359
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 277

Conread position: 7-506
Cow position:
Alignm length: 529
Alignm identity: 403
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 19

Conread position: 7-525
Cow position:
Alignm length: 544
Alignm identity: 416
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 177

Conread position: 9-317
Cow position:
Alignm length: 323
Alignm identity: 218
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 114, 22

Conread position: 10-223
Cow position:
Alignm length: 226
Alignm identity: 159
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 44, 165

Conread position: 10-498
Cow position:
Alignm length: 519
Alignm identity: 358
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 284

Conread position: 62-525
Cow position:
Alignm length: 484
Alignm identity: 381
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 216

Conread position: 70-461
Cow position:
Alignm length: 410
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 157

Conread position: 82-525
Cow position:
Alignm length: 455
Alignm identity: 346
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 91

Conread position: 120-525
Cow position:
Alignm length: 418
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 49

Conread position: 122-425
Cow position:
Alignm length: 309
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 85

Conread position: 122-525
Cow position:
Alignm length: 409
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 80

Conread position: 126-321
Cow position:
Alignm length: 203
Alignm identity: 156
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 27, 43

Conread position: 151-461
Cow position:
Alignm length: 316
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 117, 12

Conread position: 229-510
Cow position:
Alignm length: 294
Alignm identity: 219
Alignm E-value: 7.00649e-45
Alignm gaps (pig, cow): 98, 31

Show alignments to all cow chromosomes.