Cow genome map
| Conread name: | rcki31_m16.y1 |
| Conread position: | 1-242 |
| Cow position: | chr3:48600033-48599785 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 183 |
| Alignm E-value: | 8e-37 |
| Alignm gaps (pig, cow): | 74, 116 |
| Conread position: | 1-259 |
| Cow position: | chr3:60891768-60891491 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 214 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 74, 268 |
| Conread position: | 1-273 |
| Cow position: | chr3:14647887-14647602 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 189 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 54, 0 |
| Conread position: | 1-290 |
| Cow position: | chr3:16157021-16156723 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 229 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 174 |
| Conread position: | 1-328 |
| Cow position: | chr3:17864934-17864591 (view UCSC Genome Browser custom track) |
| Alignm length: | 346 |
| Alignm identity: | 259 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 76, 285 |
| Conread position: | 1-330 |
| Cow position: | chr3:74391405-74391746 (view UCSC Genome Browser custom track) |
| Alignm length: | 347 |
| Alignm identity: | 249 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 48, 255 |
| Conread position: | 1-335 |
| Cow position: | chr3:72390423-72390073 (view UCSC Genome Browser custom track) |
| Alignm length: | 353 |
| Alignm identity: | 270 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 74, 247 |
| Conread position: | 1-346 |
| Cow position: | chr3:39921442-39921801 (view UCSC Genome Browser custom track) |
| Alignm length: | 362 |
| Alignm identity: | 279 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 74, 283 |
| Conread position: | 1-353 |
| Cow position: | chr3:24432882-24432518 (view UCSC Genome Browser custom track) |
| Alignm length: | 366 |
| Alignm identity: | 274 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 76, 280 |
| Conread position: | 1-354 |
| Cow position: | chr3:17460720-17460360 (view UCSC Genome Browser custom track) |
| Alignm length: | 371 |
| Alignm identity: | 276 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 262 |
| Conread position: | 1-358 |
| Cow position: | chr3:11784864-11784495 (view UCSC Genome Browser custom track) |
| Alignm length: | 375 |
| Alignm identity: | 284 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 76, 216 |
| Conread position: | 1-411 |
| Cow position: | chr3:174002-173588 (view UCSC Genome Browser custom track) |
| Alignm length: | 425 |
| Alignm identity: | 323 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 108, 75 |
| Conread position: | 1-411 |
| Cow position: | chr3:23216827-23217242 (view UCSC Genome Browser custom track) |
| Alignm length: | 431 |
| Alignm identity: | 335 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 44, 211 |
| Conread position: | 1-418 |
| Cow position: | chr3:53519288-53518875 (view UCSC Genome Browser custom track) |
| Alignm length: | 429 |
| Alignm identity: | 310 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 76, 33 |
| Conread position: | 1-424 |
| Cow position: | chr3:59864984-59864551 (view UCSC Genome Browser custom track) |
| Alignm length: | 441 |
| Alignm identity: | 340 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 76, 284 |
| Conread position: | 1-523 |
| Cow position: | chr3:19753231-19753761 (view UCSC Genome Browser custom track) |
| Alignm length: | 543 |
| Alignm identity: | 420 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 78, 283 |
| Conread position: | 1-523 |
| Cow position: | chr3:45184496-45185017 (view UCSC Genome Browser custom track) |
| Alignm length: | 533 |
| Alignm identity: | 418 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 123, 68 |
| Conread position: | 1-523 |
| Cow position: | chr3:47272374-47272913 (view UCSC Genome Browser custom track) |
| Alignm length: | 544 |
| Alignm identity: | 412 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 69, 284 |
| Conread position: | 1-523 |
| Cow position: | chr3:49336692-49336164 (view UCSC Genome Browser custom track) |
| Alignm length: | 544 |
| Alignm identity: | 370 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 75, 44 |
| Conread position: | 1-523 |
| Cow position: | chr3:49388154-49387617 (view UCSC Genome Browser custom track) |
| Alignm length: | 547 |
| Alignm identity: | 411 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 74, 181 |
| Conread position: | 1-524 |
| Cow position: | chr3:49463066-49463588 (view UCSC Genome Browser custom track) |
| Alignm length: | 546 |
| Alignm identity: | 393 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 72, 32 |
| Conread position: | 1-525 |
| Cow position: | chr3:2903951-2904477 (view UCSC Genome Browser custom track) |
| Alignm length: | 548 |
| Alignm identity: | 422 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 72, 215 |
| Conread position: | 1-525 |
| Cow position: | chr3:7245604-7246140 (view UCSC Genome Browser custom track) |
| Alignm length: | 546 |
| Alignm identity: | 421 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 74, 48 |
| Conread position: | 1-525 |
| Cow position: | chr3:13275773-13276318 (view UCSC Genome Browser custom track) |
| Alignm length: | 550 |
| Alignm identity: | 421 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 76, 288 |
| Conread position: | 1-525 |
| Cow position: | chr3:13723207-13723749 (view UCSC Genome Browser custom track) |
| Alignm length: | 547 |
| Alignm identity: | 425 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 74, 284 |
| Conread position: | 1-525 |
| Cow position: | chr3:14680586-14680051 (view UCSC Genome Browser custom track) |
| Alignm length: | 543 |
| Alignm identity: | 415 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 97, 77 |
| Conread position: | 1-525 |
| Cow position: | chr3:20999567-21000125 (view UCSC Genome Browser custom track) |
| Alignm length: | 561 |
| Alignm identity: | 418 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 76, 284 |
| Conread position: | 1-525 |
| Cow position: | chr3:22724279-22724807 (view UCSC Genome Browser custom track) |
| Alignm length: | 540 |
| Alignm identity: | 399 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 76, 109 |
| Conread position: | 1-525 |
| Cow position: | chr3:24442602-24443131 (view UCSC Genome Browser custom track) |
| Alignm length: | 538 |
| Alignm identity: | 424 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 76, 280 |
| Conread position: | 1-525 |
| Cow position: | chr3:24638906-24638375 (view UCSC Genome Browser custom track) |
| Alignm length: | 548 |
| Alignm identity: | 420 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 75, 205 |
| Conread position: | 1-525 |
| Cow position: | chr3:25057168-25056653 (view UCSC Genome Browser custom track) |
| Alignm length: | 542 |
| Alignm identity: | 420 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 69, 73 |
| Conread position: | 1-525 |
| Cow position: | chr3:42846848-42846317 (view UCSC Genome Browser custom track) |
| Alignm length: | 545 |
| Alignm identity: | 423 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 76, 283 |
| Conread position: | 1-525 |
| Cow position: | chr3:43189768-43190306 (view UCSC Genome Browser custom track) |
| Alignm length: | 543 |
| Alignm identity: | 426 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 281 |
| Conread position: | 1-525 |
| Cow position: | chr3:46506273-46505732 (view UCSC Genome Browser custom track) |
| Alignm length: | 547 |
| Alignm identity: | 418 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 73, 180 |
| Conread position: | 1-525 |
| Cow position: | chr3:49604942-49605475 (view UCSC Genome Browser custom track) |
| Alignm length: | 545 |
| Alignm identity: | 416 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 74, 25 |
| Conread position: | 1-525 |
| Cow position: | chr3:49907530-49908059 (view UCSC Genome Browser custom track) |
| Alignm length: | 542 |
| Alignm identity: | 405 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 74, 24 |
| Conread position: | 1-525 |
| Cow position: | chr3:58950963-58950425 (view UCSC Genome Browser custom track) |
| Alignm length: | 545 |
| Alignm identity: | 428 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 77, 188 |
| Conread position: | 1-525 |
| Cow position: | chr3:60184666-60185219 (view UCSC Genome Browser custom track) |
| Alignm length: | 561 |
| Alignm identity: | 412 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 55 |
| Conread position: | 1-525 |
| Cow position: | chr3:61678037-61677502 (view UCSC Genome Browser custom track) |
| Alignm length: | 546 |
| Alignm identity: | 441 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 93, 79 |
| Conread position: | 1-525 |
| Cow position: | chr3:63202734-63202209 (view UCSC Genome Browser custom track) |
| Alignm length: | 541 |
| Alignm identity: | 389 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 52, 59 |
| Conread position: | 1-525 |
| Cow position: | chr3:69930332-69930870 (view UCSC Genome Browser custom track) |
| Alignm length: | 546 |
| Alignm identity: | 417 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 78, 229 |
| Conread position: | 1-525 |
| Cow position: | chr3:72669056-72669598 (view UCSC Genome Browser custom track) |
| Alignm length: | 547 |
| Alignm identity: | 425 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 76, 283 |
| Conread position: | 1-525 |
| Cow position: | chr3:75038337-75038878 (view UCSC Genome Browser custom track) |
| Alignm length: | 546 |
| Alignm identity: | 432 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 76, 284 |
| Conread position: | 1-525 |
| Cow position: | chr3:78023935-78024466 (view UCSC Genome Browser custom track) |
| Alignm length: | 543 |
| Alignm identity: | 413 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 80, 176 |
| Conread position: | 1-525 |
| Cow position: | chr3:81101583-81101043 (view UCSC Genome Browser custom track) |
| Alignm length: | 546 |
| Alignm identity: | 429 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 78, 284 |
| Conread position: | 1-530 |
| Cow position: | chr3:65085438-65084893 (view UCSC Genome Browser custom track) |
| Alignm length: | 552 |
| Alignm identity: | 427 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 74, 213 |
| Conread position: | 1-539 |
| Cow position: | chr3:5951121-5951664 (view UCSC Genome Browser custom track) |
| Alignm length: | 559 |
| Alignm identity: | 412 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 76, 54 |
| Conread position: | 2-445 |
| Cow position: | chr3:75997391-75997841 (view UCSC Genome Browser custom track) |
| Alignm length: | 461 |
| Alignm identity: | 350 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 73, 36 |
| Conread position: | 2-475 |
| Cow position: | chr3:49416344-49416834 (view UCSC Genome Browser custom track) |
| Alignm length: | 495 |
| Alignm identity: | 391 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 70, 282 |
| Conread position: | 2-496 |
| Cow position: | chr3:73450810-73451321 (view UCSC Genome Browser custom track) |
| Alignm length: | 516 |
| Alignm identity: | 406 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 75, 283 |
| Conread position: | 2-524 |
| Cow position: | chr3:53047298-53047827 (view UCSC Genome Browser custom track) |
| Alignm length: | 536 |
| Alignm identity: | 405 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 75, 43 |
| Conread position: | 2-525 |
| Cow position: | chr3:57481242-57481773 (view UCSC Genome Browser custom track) |
| Alignm length: | 545 |
| Alignm identity: | 418 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 75, 217 |
| Conread position: | 3-208 |
| Cow position: | chr3:15379708-15379928 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 165 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 73, 0 |
| Conread position: | 3-460 |
| Cow position: | chr3:3884688-3885168 (view UCSC Genome Browser custom track) |
| Alignm length: | 487 |
| Alignm identity: | 355 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 11 |
| Conread position: | 3-523 |
| Cow position: | chr3:12750399-12749866 (view UCSC Genome Browser custom track) |
| Alignm length: | 541 |
| Alignm identity: | 406 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 72, 195 |
| Conread position: | 5-335 |
| Cow position: | chr3:22220640-22220297 (view UCSC Genome Browser custom track) |
| Alignm length: | 348 |
| Alignm identity: | 259 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 70, 175 |
| Conread position: | 5-349 |
| Cow position: | chr3:14724610-14724260 (view UCSC Genome Browser custom track) |
| Alignm length: | 356 |
| Alignm identity: | 269 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 71, 44 |
| Conread position: | 5-516 |
| Cow position: | chr3:55374580-55374057 (view UCSC Genome Browser custom track) |
| Alignm length: | 539 |
| Alignm identity: | 399 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 71, 189 |
| Conread position: | 5-525 |
| Cow position: | chr3:58034167-58034673 (view UCSC Genome Browser custom track) |
| Alignm length: | 527 |
| Alignm identity: | 387 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 121, 82 |
| Conread position: | 5-525 |
| Cow position: | chr3:63688411-63688926 (view UCSC Genome Browser custom track) |
| Alignm length: | 540 |
| Alignm identity: | 405 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 41, 176 |
| Conread position: | 5-525 |
| Cow position: | chr3:70913763-70914300 (view UCSC Genome Browser custom track) |
| Alignm length: | 550 |
| Alignm identity: | 423 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 68, 180 |
| Conread position: | 6-330 |
| Cow position: | chr3:59118279-59118619 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 255 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 69, 274 |
| Conread position: | 6-365 |
| Cow position: | chr3:37600227-37599861 (view UCSC Genome Browser custom track) |
| Alignm length: | 379 |
| Alignm identity: | 302 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 70, 38 |
| Conread position: | 6-383 |
| Cow position: | chr3:14280176-14279793 (view UCSC Genome Browser custom track) |
| Alignm length: | 393 |
| Alignm identity: | 294 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 69, 172 |
| Conread position: | 6-404 |
| Cow position: | chr3:22272200-22272594 (view UCSC Genome Browser custom track) |
| Alignm length: | 415 |
| Alignm identity: | 286 |
| Alignm E-value: | 4.00001e-40 |
| Alignm gaps (pig, cow): | 34, 88 |
| Conread position: | 6-412 |
| Cow position: | chr3:42603156-42602737 (view UCSC Genome Browser custom track) |
| Alignm length: | 429 |
| Alignm identity: | 306 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 34, 51 |
| Conread position: | 6-424 |
| Cow position: | chr3:79596115-79595701 (view UCSC Genome Browser custom track) |
| Alignm length: | 429 |
| Alignm identity: | 321 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 69, 90 |
| Conread position: | 6-449 |
| Cow position: | chr3:5887383-5886926 (view UCSC Genome Browser custom track) |
| Alignm length: | 464 |
| Alignm identity: | 360 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 71, 195 |
| Conread position: | 6-486 |
| Cow position: | chr3:56160326-56160814 (view UCSC Genome Browser custom track) |
| Alignm length: | 506 |
| Alignm identity: | 380 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 69, 8 |
| Conread position: | 6-514 |
| Cow position: | chr3:14864382-14863859 (view UCSC Genome Browser custom track) |
| Alignm length: | 530 |
| Alignm identity: | 415 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 69, 279 |
| Conread position: | 6-515 |
| Cow position: | chr3:31422626-31423153 (view UCSC Genome Browser custom track) |
| Alignm length: | 536 |
| Alignm identity: | 407 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 71, 20 |
| Conread position: | 6-522 |
| Cow position: | chr3:7856921-7856392 (view UCSC Genome Browser custom track) |
| Alignm length: | 539 |
| Alignm identity: | 399 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 66, 175 |
| Conread position: | 6-522 |
| Cow position: | chr3:23204178-23204707 (view UCSC Genome Browser custom track) |
| Alignm length: | 539 |
| Alignm identity: | 418 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 71, 53 |
| Conread position: | 6-522 |
| Cow position: | chr3:38252322-38251820 (view UCSC Genome Browser custom track) |
| Alignm length: | 529 |
| Alignm identity: | 382 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 103, 64 |
| Conread position: | 6-523 |
| Cow position: | chr3:3652807-3653321 (view UCSC Genome Browser custom track) |
| Alignm length: | 538 |
| Alignm identity: | 402 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 69, 20 |
| Conread position: | 6-523 |
| Cow position: | chr3:66829449-66829972 (view UCSC Genome Browser custom track) |
| Alignm length: | 536 |
| Alignm identity: | 406 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 71, 201 |
| Conread position: | 6-525 |
| Cow position: | chr3:4031247-4030719 (view UCSC Genome Browser custom track) |
| Alignm length: | 545 |
| Alignm identity: | 392 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 69, 180 |
| Conread position: | 6-525 |
| Cow position: | chr3:6865149-6864624 (view UCSC Genome Browser custom track) |
| Alignm length: | 536 |
| Alignm identity: | 415 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 71, 88 |
| Conread position: | 6-525 |
| Cow position: | chr3:10244159-10243625 (view UCSC Genome Browser custom track) |
| Alignm length: | 539 |
| Alignm identity: | 422 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 71, 279 |
| Conread position: | 6-525 |
| Cow position: | chr3:18815005-18814470 (view UCSC Genome Browser custom track) |
| Alignm length: | 541 |
| Alignm identity: | 428 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 71, 272 |
| Conread position: | 6-525 |
| Cow position: | chr3:18886957-18886425 (view UCSC Genome Browser custom track) |
| Alignm length: | 542 |
| Alignm identity: | 412 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 69, 175 |
| Conread position: | 6-525 |
| Cow position: | chr3:23010851-23010336 (view UCSC Genome Browser custom track) |
| Alignm length: | 536 |
| Alignm identity: | 410 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 63, 362 |
| Conread position: | 6-525 |
| Cow position: | chr3:24585728-24586266 (view UCSC Genome Browser custom track) |
| Alignm length: | 543 |
| Alignm identity: | 409 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 178 |
| Conread position: | 6-525 |
| Cow position: | chr3:30321744-30321221 (view UCSC Genome Browser custom track) |
| Alignm length: | 533 |
| Alignm identity: | 413 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 71, 109 |
| Conread position: | 6-525 |
| Cow position: | chr3:38096400-38095863 (view UCSC Genome Browser custom track) |
| Alignm length: | 542 |
| Alignm identity: | 418 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 71, 279 |
| Conread position: | 6-525 |
| Cow position: | chr3:48603760-48603215 (view UCSC Genome Browser custom track) |
| Alignm length: | 551 |
| Alignm identity: | 422 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 71, 45 |
| Conread position: | 6-525 |
| Cow position: | chr3:56644831-56645367 (view UCSC Genome Browser custom track) |
| Alignm length: | 541 |
| Alignm identity: | 415 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 71, 279 |
| Conread position: | 6-525 |
| Cow position: | chr3:65989406-65988887 (view UCSC Genome Browser custom track) |
| Alignm length: | 538 |
| Alignm identity: | 407 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 71, 43 |
| Conread position: | 6-525 |
| Cow position: | chr3:72633572-72633037 (view UCSC Genome Browser custom track) |
| Alignm length: | 541 |
| Alignm identity: | 431 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 71, 204 |
| Conread position: | 6-525 |
| Cow position: | chr3:76000461-76000991 (view UCSC Genome Browser custom track) |
| Alignm length: | 545 |
| Alignm identity: | 423 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 71, 49 |
| Conread position: | 6-525 |
| Cow position: | chr3:77226217-77225699 (view UCSC Genome Browser custom track) |
| Alignm length: | 534 |
| Alignm identity: | 381 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 94 |
| Conread position: | 7-283 |
| Cow position: | chr3:75479356-75479068 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 172 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 37, 65 |
| Conread position: | 7-294 |
| Cow position: | chr3:64294019-64293721 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 230 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 68, 216 |
| Conread position: | 7-316 |
| Cow position: | chr3:522072-521750 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 238 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 63, 149 |
| Conread position: | 7-330 |
| Cow position: | chr3:76136818-76136478 (view UCSC Genome Browser custom track) |
| Alignm length: | 344 |
| Alignm identity: | 266 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 64, 19 |
| Conread position: | 7-363 |
| Cow position: | chr3:46006587-46006230 (view UCSC Genome Browser custom track) |
| Alignm length: | 373 |
| Alignm identity: | 269 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 101, 171 |
| Conread position: | 7-425 |
| Cow position: | chr3:73416501-73416065 (view UCSC Genome Browser custom track) |
| Alignm length: | 443 |
| Alignm identity: | 314 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 46, 58 |
| Conread position: | 7-475 |
| Cow position: | chr3:40004011-40004465 (view UCSC Genome Browser custom track) |
| Alignm length: | 488 |
| Alignm identity: | 375 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 68, 175 |
| Conread position: | 7-506 |
| Cow position: | chr3:36874562-36875078 (view UCSC Genome Browser custom track) |
| Alignm length: | 521 |
| Alignm identity: | 403 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 70, 278 |
| Conread position: | 7-513 |
| Cow position: | chr3:12668194-12667680 (view UCSC Genome Browser custom track) |
| Alignm length: | 527 |
| Alignm identity: | 394 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 68, 271 |
| Conread position: | 7-525 |
| Cow position: | chr3:24531174-24530666 (view UCSC Genome Browser custom track) |
| Alignm length: | 526 |
| Alignm identity: | 363 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 67, 49 |
| Conread position: | 7-525 |
| Cow position: | chr3:24572670-24573197 (view UCSC Genome Browser custom track) |
| Alignm length: | 540 |
| Alignm identity: | 411 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 66, 162 |
| Conread position: | 7-525 |
| Cow position: | chr3:45977998-45977466 (view UCSC Genome Browser custom track) |
| Alignm length: | 540 |
| Alignm identity: | 413 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 67, 278 |
| Conread position: | 7-525 |
| Cow position: | chr3:50921535-50921004 (view UCSC Genome Browser custom track) |
| Alignm length: | 540 |
| Alignm identity: | 400 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 70, 214 |
| Conread position: | 8-356 |
| Cow position: | chr3:51235007-51235358 (view UCSC Genome Browser custom track) |
| Alignm length: | 364 |
| Alignm identity: | 273 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 67, 43 |
| Conread position: | 8-424 |
| Cow position: | chr3:14466369-14466792 (view UCSC Genome Browser custom track) |
| Alignm length: | 431 |
| Alignm identity: | 316 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 67, 173 |
| Conread position: | 8-525 |
| Cow position: | chr3:34556892-34557406 (view UCSC Genome Browser custom track) |
| Alignm length: | 532 |
| Alignm identity: | 414 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 114, 30 |
| Conread position: | 10-523 |
| Cow position: | chr3:18352866-18353406 (view UCSC Genome Browser custom track) |
| Alignm length: | 547 |
| Alignm identity: | 373 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 178 |
| Conread position: | 13-393 |
| Cow position: | chr3:37451580-37451200 (view UCSC Genome Browser custom track) |
| Alignm length: | 392 |
| Alignm identity: | 279 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 100 |
| Conread position: | 13-525 |
| Cow position: | chr3:64376223-64376745 (view UCSC Genome Browser custom track) |
| Alignm length: | 529 |
| Alignm identity: | 409 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 65, 262 |
| Conread position: | 15-525 |
| Cow position: | chr3:40826887-40826361 (view UCSC Genome Browser custom track) |
| Alignm length: | 533 |
| Alignm identity: | 426 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 270 |
| Conread position: | 32-374 |
| Cow position: | chr3:35056450-35056097 (view UCSC Genome Browser custom track) |
| Alignm length: | 362 |
| Alignm identity: | 284 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 44, 24 |
| Conread position: | 34-296 |
| Cow position: | chr3:54877126-54876857 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 203 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 138 |
| Conread position: | 42-425 |
| Cow position: | chr3:19794633-19795024 (view UCSC Genome Browser custom track) |
| Alignm length: | 397 |
| Alignm identity: | 315 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 134 |
| Conread position: | 42-525 |
| Cow position: | chr3:11384774-11384281 (view UCSC Genome Browser custom track) |
| Alignm length: | 504 |
| Alignm identity: | 389 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 225 |
| Conread position: | 42-525 |
| Cow position: | chr3:64698257-64697796 (view UCSC Genome Browser custom track) |
| Alignm length: | 494 |
| Alignm identity: | 370 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 107 |
| Conread position: | 46-317 |
| Cow position: | chr3:68043045-68043332 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 214 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 29, 197 |
| Conread position: | 46-525 |
| Cow position: | chr3:39327998-39327512 (view UCSC Genome Browser custom track) |
| Alignm length: | 495 |
| Alignm identity: | 379 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 58, 128 |
| Conread position: | 71-525 |
| Cow position: | chr3:27454506-27454969 (view UCSC Genome Browser custom track) |
| Alignm length: | 474 |
| Alignm identity: | 364 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 106 |
| Conread position: | 83-525 |
| Cow position: | chr3:31224690-31224243 (view UCSC Genome Browser custom track) |
| Alignm length: | 457 |
| Alignm identity: | 350 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 90 |
| Conread position: | 95-419 |
| Cow position: | chr3:34464768-34464441 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 267 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 80 |
| Conread position: | 110-423 |
| Cow position: | chr3:13117678-13117983 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 252 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 59 |
| Conread position: | 120-525 |
| Cow position: | chr3:32490339-32490749 (view UCSC Genome Browser custom track) |
| Alignm length: | 415 |
| Alignm identity: | 327 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 31, 153 |
| Conread position: | 120-525 |
| Cow position: | chr3:48240625-48240216 (view UCSC Genome Browser custom track) |
| Alignm length: | 416 |
| Alignm identity: | 326 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 54 |
| Conread position: | 122-525 |
| Cow position: | chr3:76187910-76187496 (view UCSC Genome Browser custom track) |
| Alignm length: | 423 |
| Alignm identity: | 319 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 53 |
| Conread position: | 122-538 |
| Cow position: | chr3:2791119-2790703 (view UCSC Genome Browser custom track) |
| Alignm length: | 423 |
| Alignm identity: | 340 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 43 |
| Conread position: | 151-497 |
| Cow position: | chr3:2432318-2432661 (view UCSC Genome Browser custom track) |
| Alignm length: | 351 |
| Alignm identity: | 280 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 274, 12 |
| Conread position: | 152-536 |
| Cow position: | chr3:21005152-21004769 (view UCSC Genome Browser custom track) |
| Alignm length: | 394 |
| Alignm identity: | 307 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 41, 11 |
| Conread position: | 154-303 |
| Cow position: | chr3:77272495-77272640 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 116 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 9, 0 |
| Conread position: | 163-525 |
| Cow position: | chr3:31120811-31121177 (view UCSC Genome Browser custom track) |
| Alignm length: | 371 |
| Alignm identity: | 296 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 262, 105 |
| Conread position: | 163-525 |
| Cow position: | chr3:49134211-49134573 (view UCSC Genome Browser custom track) |
| Alignm length: | 367 |
| Alignm identity: | 300 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 262, 105 |
| Conread position: | 164-524 |
| Cow position: | chr3:63238711-63239063 (view UCSC Genome Browser custom track) |
| Alignm length: | 365 |
| Alignm identity: | 283 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 261, 105 |
| Conread position: | 176-538 |
| Cow position: | chr3:44101364-44100999 (view UCSC Genome Browser custom track) |
| Alignm length: | 374 |
| Alignm identity: | 290 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 221, 11 |
| Conread position: | 178-365 |
| Cow position: | chr3:44536677-44536863 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 152 |
| Alignm E-value: | 7.00649e-45 |
| Alignm gaps (pig, cow): | 90, 0 |
| Conread position: | 183-507 |
| Cow position: | chr3:34116065-34116388 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 249 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 86 |
| Conread position: | 185-525 |
| Cow position: | chr3:63000078-63000394 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 256 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 54, 0 |
| Conread position: | 187-489 |
| Cow position: | chr3:6854325-6854627 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 248 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 240, 81 |
| Conread position: | 189-525 |
| Cow position: | chr3:57555071-57554741 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 272 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 66 |
| Conread position: | 194-529 |
| Cow position: | chr3:46900063-46899738 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 256 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 233, 23 |
| Conread position: | 211-472 |
| Cow position: | chr3:36571415-36571158 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 215 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 214, 57 |
| Conread position: | 219-462 |
| Cow position: | chr3:36403093-36402851 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 190 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 206, 49 |
| Conread position: | 233-524 |
| Cow position: | chr3:3061102-3060817 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 231 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 116, 35 |
| Conread position: | 233-525 |
| Cow position: | chr3:13115187-13115473 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 241 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 192, 35 |
| Conread position: | 247-455 |
| Cow position: | chr3:14558393-14558611 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 173 |
| Alignm E-value: | 6.02558e-44 |
| Alignm gaps (pig, cow): | 6, 0 |
| Conread position: | 251-524 |
| Cow position: | chr3:56336721-56336993 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 217 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 174, 17 |
| Conread position: | 252-443 |
| Cow position: | chr3:22281188-22281383 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 144 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 16, 160 |
| Conread position: | 252-525 |
| Cow position: | chr3:66623448-66623177 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 222 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 173, 16 |
| Conread position: | 254-525 |
| Cow position: | chr3:61277801-61277531 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 213 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 151, 14 |
| Conread position: | 263-409 |
| Cow position: | chr3:45568458-45568314 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 116 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 20, 114 |
| Conread position: | 267-391 |
| Cow position: | chr3:77366463-77366584 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 101 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 54, 0 |
| Conread position: | 276-525 |
| Cow position: | chr3:5445703-5445948 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 205 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 136, 57 |
| Conread position: | 282-525 |
| Cow position: | chr3:63276656-63276895 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 196 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 143, 91 |
Show alignments to all cow chromosomes.